BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00023992
         (680 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr...   265   2e-68
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...   265   2e-68
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr...   265   2e-68
gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sin...   259   1e-66
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   258   2e-66
ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [The...   173   8e-41
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...   160   5e-37
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   157   4e-36
ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   154   6e-35
ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   152   1e-34
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   152   1e-34
ref|XP_002533596.1| conserved hypothetical protein [Ricinus comm...   142   2e-31
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   139   2e-30
emb|CDP02357.1| unnamed protein product [Coffea canephora]            139   2e-30
ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   137   6e-30
ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   135   2e-29
ref|XP_010261429.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   129   2e-27
ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   129   2e-27
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   129   2e-27
ref|XP_010029435.1| PREDICTED: DNA-directed RNA polymerase 2B, c...   128   4e-27

>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533046|gb|ESR44229.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 928

 Score =  265 bits (677), Expect = 2e-68
 Identities = 143/236 (60%), Positives = 159/236 (67%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 SNKFDHFVICXXXXXXXXN---------PEKISSAMWRNAAKQVISFHLKKPFSRVYSFL 526
           +NKFDH  +C        N         PEKISS MWRN AKQ IS HLKKPFSR YSFL
Sbjct: 12  ANKFDHLPVCYYNHNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFSRAYSFL 71

Query: 525 GVSQGSIISRERVHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNG 346
           G+SQ SI+ RE+V FGCLDMV RGIHEVGS RIGE+L+H D +GRTSFGVL+N++FWC  
Sbjct: 72  GISQDSIL-REKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFWC-- 128

Query: 345 LCPRGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGK-WQRVASGMGS 169
             PRGYATVAEA                               + G G+  +RVA GMGS
Sbjct: 129 --PRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGS 186

Query: 168 GNYESLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           G Y  LK RQVKIETEAW+QAA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 187 GKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 242


>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533045|gb|ESR44228.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score =  265 bits (677), Expect = 2e-68
 Identities = 143/236 (60%), Positives = 159/236 (67%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 SNKFDHFVICXXXXXXXXN---------PEKISSAMWRNAAKQVISFHLKKPFSRVYSFL 526
           +NKFDH  +C        N         PEKISS MWRN AKQ IS HLKKPFSR YSFL
Sbjct: 12  ANKFDHLPVCYYNHNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFSRAYSFL 71

Query: 525 GVSQGSIISRERVHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNG 346
           G+SQ SI+ RE+V FGCLDMV RGIHEVGS RIGE+L+H D +GRTSFGVL+N++FWC  
Sbjct: 72  GISQDSIL-REKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFWC-- 128

Query: 345 LCPRGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGK-WQRVASGMGS 169
             PRGYATVAEA                               + G G+  +RVA GMGS
Sbjct: 129 --PRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGS 186

Query: 168 GNYESLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           G Y  LK RQVKIETEAW+QAA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 187 GKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 242


>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
           gi|557533044|gb|ESR44227.1| hypothetical protein
           CICLE_v10010966mg [Citrus clementina]
          Length = 933

 Score =  265 bits (677), Expect = 2e-68
 Identities = 143/236 (60%), Positives = 159/236 (67%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 SNKFDHFVICXXXXXXXXN---------PEKISSAMWRNAAKQVISFHLKKPFSRVYSFL 526
           +NKFDH  +C        N         PEKISS MWRN AKQ IS HLKKPFSR YSFL
Sbjct: 12  ANKFDHLPVCYYNHNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFSRAYSFL 71

Query: 525 GVSQGSIISRERVHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNG 346
           G+SQ SI+ RE+V FGCLDMV RGIHEVGS RIGE+L+H D +GRTSFGVL+N++FWC  
Sbjct: 72  GISQDSIL-REKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFWC-- 128

Query: 345 LCPRGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGK-WQRVASGMGS 169
             PRGYATVAEA                               + G G+  +RVA GMGS
Sbjct: 129 --PRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGGGRNRRRVARGMGS 186

Query: 168 GNYESLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           G Y  LK RQVKIETEAW+QAA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 187 GKYRMLKMRQVKIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 242


>gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sinensis]
          Length = 1030

 Score =  259 bits (662), Expect = 1e-66
 Identities = 140/236 (59%), Positives = 159/236 (67%), Gaps = 10/236 (4%)
 Frame = -3

Query: 678 SNKFDHFVICXXXXXXXXN---------PEKISSAMWRNAAKQVISFHLKKPFSRVYSFL 526
           +NKFDH  +C        N         PEKISS MWRN AKQ IS HLKKPFSR YSFL
Sbjct: 12  ANKFDHLPVCYYNHNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFSRAYSFL 71

Query: 525 GVSQGSIISRERVHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNG 346
           G+SQ SI+ R++V F CLDMV RGIHEVGS RIGE+L+H D +GRTSFGVL+N++FWC  
Sbjct: 72  GISQDSIL-RDKVKFVCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFWC-- 128

Query: 345 LCPRGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGK-WQRVASGMGS 169
             PRGYATVAEA                               + G+G+  +RVA GMGS
Sbjct: 129 --PRGYATVAEAVSSTDVEEDVSIVEEIQELLQEMKKEEQREGENGSGRNRRRVARGMGS 186

Query: 168 GNYESLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           G Y  LK RQVKIETEAW++AA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 187 GKYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 242


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score =  258 bits (660), Expect = 2e-66
 Identities = 141/235 (60%), Positives = 157/235 (66%), Gaps = 9/235 (3%)
 Frame = -3

Query: 678 SNKFDHFVICXXXXXXXXN---------PEKISSAMWRNAAKQVISFHLKKPFSRVYSFL 526
           +NKFDH  +C        N         PEKISS MWRN AKQ IS HLKKPFSR YSFL
Sbjct: 12  ANKFDHLPVCYYNHNNYNNNKPTIRFPSPEKISSVMWRNVAKQAISLHLKKPFSRAYSFL 71

Query: 525 GVSQGSIISRERVHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNG 346
           G+SQ SI+ RE+V FGCLDMV RGIHEVGS RIGE+L+H D +GRTSFGVL+N++FW   
Sbjct: 72  GISQDSIL-REKVKFGCLDMVPRGIHEVGSGRIGEILNHEDYMGRTSFGVLKNDNFW--- 127

Query: 345 LCPRGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSG 166
            CPRGYATVAEA                              +  G    +RVA GMGSG
Sbjct: 128 -CPRGYATVAEA---VSSTDVEEDVSIVEEIQELLQEMKKEQQSGGGRNRRRVARGMGSG 183

Query: 165 NYESLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
            Y  LK RQVKIETEAW++AA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 184 KYRMLKMRQVKIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 238


>ref|XP_007032921.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
           gi|508711950|gb|EOY03847.1| DNA/RNA polymerases
           superfamily protein [Theobroma cacao]
          Length = 1100

 Score =  173 bits (439), Expect = 8e-41
 Identities = 106/233 (45%), Positives = 128/233 (54%), Gaps = 8/233 (3%)
 Frame = -3

Query: 675 NKFDHFVICXXXXXXXXN--PEKISSAMWRNAAKQVIS--FHLKKPFSRVYSFLGVSQGS 508
           +KFDHFV             P KIS  MWRN AK  IS   H  + F+R YSFLG SQ S
Sbjct: 15  DKFDHFVPLDNRNPSILYQNPPKISIVMWRNIAKHAISRRTHSFQCFARTYSFLGTSQDS 74

Query: 507 IISRER----VHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLC 340
           I   +     + FG      R + ++G  RIGE+L++ + +G+ SFG  RN +  C+GLC
Sbjct: 75  IFHEKSKFRGLKFGSFCSNSRFL-DMGGRRIGEVLTNVEYIGKQSFGSPRN-EIGCSGLC 132

Query: 339 PRGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNY 160
           PRGY +VAEA                                    + Q +  GMG   Y
Sbjct: 133 PRGYVSVAEAVSSTDVEEDVSVVEEIKELLDEMKKEQRRETGNRRRRCQIIERGMGESKY 192

Query: 159 ESLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
             L+RRQVKIETEAW+QAA EYRELLMDMC   LAPNLPY+KSLFLGWFEPLR
Sbjct: 193 RFLRRRQVKIETEAWEQAAKEYRELLMDMCEHKLAPNLPYIKSLFLGWFEPLR 245


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
           gi|462411068|gb|EMJ16117.1| hypothetical protein
           PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score =  160 bits (406), Expect = 5e-37
 Identities = 96/212 (45%), Positives = 112/212 (52%), Gaps = 5/212 (2%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVIS----FHLK-KPFSRVYSFLGVSQGSIISRERVHFGCLDMVYR 457
           P  IS+ +WRN AKQ IS    FH+  + FSR YS LG+ Q S+       F        
Sbjct: 29  PSMISTTVWRNFAKQAISRKQRFHINSQSFSRAYSLLGICQESVFPGNFKPFELSSCSSL 88

Query: 456 GIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXXXXX 277
              EVG    G + S  D + + SF  +RN   W NG CP+GYA+VAEA           
Sbjct: 89  RFSEVGFRGKGAISSPEDCMCKPSFWSVRN-PIWFNGFCPKGYASVAEAVSSTDVEEEVS 147

Query: 276 XXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADE 97
                                      Q  A GMG G Y  LKRRQ+KIETEAW++AA E
Sbjct: 148 VVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKE 207

Query: 96  YRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           YREL+MDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 208 YRELMMDMCEQKLAPNLPYMKSLFLGWFEPLR 239


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Vitis vinifera]
           gi|731418092|ref|XP_010660553.1| PREDICTED: DNA-directed
           RNA polymerase 2, chloroplastic/mitochondrial [Vitis
           vinifera] gi|298204431|emb|CBI16911.3| unnamed protein
           product [Vitis vinifera]
          Length = 1035

 Score =  157 bits (398), Expect = 4e-36
 Identities = 99/217 (45%), Positives = 118/217 (54%), Gaps = 10/217 (4%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVISFHLKK-------PFSRVYSFLGVSQGSIISRERVHFGCLD-- 469
           P K  + MWRN AK+ I    +K       P SR YSFLG SQ  +I  E + FG  +  
Sbjct: 33  PLKKPTVMWRNIAKRAIPRAPRKCVYLDSQPLSRRYSFLGFSQ-DLIFPEIMKFGTFEPS 91

Query: 468 -MVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXX 292
                G  E+G  RIGE+ S  D+VGR SFG LRN     +G CP+ YA+VAEA      
Sbjct: 92  SCSSSGFSEMGFRRIGEISSREDAVGRPSFGCLRNQ-MGFSGFCPKSYASVAEAVSSTDV 150

Query: 291 XXXXXXXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWK 112
                                    +    +  ++  GM  G Y  L+RRQVKIETEAW+
Sbjct: 151 EEDVSASDEIQELLGEMKKEEKRQVNFKRREKLKMERGMEQGRYLRLRRRQVKIETEAWE 210

Query: 111 QAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
            AA EY+ELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 211 LAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 247


>ref|XP_009373754.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Pyrus x
           bretschneideri]
          Length = 1024

 Score =  154 bits (388), Expect = 6e-35
 Identities = 94/215 (43%), Positives = 115/215 (53%), Gaps = 8/215 (3%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVISFHLK-----KPFSRVYSFLGVSQGSIISRERVHF---GCLDM 466
           P  IS+++WRN AKQ IS + +     +  SR YS L  S+ S+ S +   F    CL  
Sbjct: 29  PSMISTSLWRNLAKQAISGNQRCRLSSQSISRAYSLLRFSRESVFSEKFKPFETGSCL-- 86

Query: 465 VYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXX 286
             +G  EVG    GE+ S    +G  S G +RN     NG CP+GYA++AEA        
Sbjct: 87  --KGFPEVGFCGKGEISSGESYMGNPSLGSVRN-PIGFNGFCPKGYASIAEAVSSTDAEE 143

Query: 285 XXXXXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQA 106
                                  D      QR   GMG   Y +LKRRQ+KIETEAW++A
Sbjct: 144 DVSVVDEVQELLQQMSKEGKRQTDHWRRMRQRRVRGMGQAKYLALKRRQIKIETEAWERA 203

Query: 105 ADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           A EYREL+MDMC   LAPNLPYMKSLFLGWFEPLR
Sbjct: 204 AKEYRELMMDMCEHKLAPNLPYMKSLFLGWFEPLR 238


>ref|XP_008230318.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X2 [Prunus mume]
          Length = 862

 Score =  152 bits (385), Expect = 1e-34
 Identities = 94/212 (44%), Positives = 110/212 (51%), Gaps = 5/212 (2%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVIS----FHLK-KPFSRVYSFLGVSQGSIISRERVHFGCLDMVYR 457
           P  IS+ +WRN AKQ IS    FH+  + FSR YS L + Q S+       F        
Sbjct: 29  PSMISTTVWRNFAKQAISRKQRFHINSQSFSRAYSLLRICQESVFPGNFKPFELSSCSSL 88

Query: 456 GIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXXXXX 277
              EVG    G + S  D + + SF  +RN     NG CP+GYA+VAEA           
Sbjct: 89  RFSEVGFRGKGTISSPEDCMCKPSFWSVRN-PIGFNGFCPKGYASVAEAVSSTDVEEDVS 147

Query: 276 XXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADE 97
                                      Q  A GMG G Y  LKRRQ+KIETEAW++AA E
Sbjct: 148 VVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKE 207

Query: 96  YRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           YREL+MDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 208 YRELMMDMCEQKLAPNLPYMKSLFLGWFEPLR 239


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial isoform X1 [Prunus mume]
          Length = 1024

 Score =  152 bits (385), Expect = 1e-34
 Identities = 94/212 (44%), Positives = 110/212 (51%), Gaps = 5/212 (2%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVIS----FHLK-KPFSRVYSFLGVSQGSIISRERVHFGCLDMVYR 457
           P  IS+ +WRN AKQ IS    FH+  + FSR YS L + Q S+       F        
Sbjct: 29  PSMISTTVWRNFAKQAISRKQRFHINSQSFSRAYSLLRICQESVFPGNFKPFELSSCSSL 88

Query: 456 GIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXXXXX 277
              EVG    G + S  D + + SF  +RN     NG CP+GYA+VAEA           
Sbjct: 89  RFSEVGFRGKGTISSPEDCMCKPSFWSVRN-PIGFNGFCPKGYASVAEAVSSTDVEEDVS 147

Query: 276 XXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADE 97
                                      Q  A GMG G Y  LKRRQ+KIETEAW++AA E
Sbjct: 148 VVDEVQELLQQMSIEEKREAQYKQRTRQNRARGMGQGKYHMLKRRQIKIETEAWERAAKE 207

Query: 96  YRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           YREL+MDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 208 YRELMMDMCEQKLAPNLPYMKSLFLGWFEPLR 239


>ref|XP_002533596.1| conserved hypothetical protein [Ricinus communis]
           gi|223526525|gb|EEF28787.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 395

 Score =  142 bits (358), Expect = 2e-31
 Identities = 90/218 (41%), Positives = 113/218 (51%), Gaps = 18/218 (8%)
 Frame = -3

Query: 600 MWRNAAKQVISFHLKK-----PFSRVYSFLGVSQGSIISRERVHFGC-LDMVYRGIHEVG 439
           MWRN AKQ IS    K     P S  YSFLG+SQ    + +     C L  +Y     VG
Sbjct: 1   MWRNVAKQTISRAQSKSLSSHPLSSTYSFLGLSQEPSFTDK-----CKLSPLYACSSLVG 55

Query: 438 SSRIGELLSHGDSVGRTSFGVLRNND------------FWCNGLCPRGYATVAEAXXXXX 295
             R+GE++ + D +G+  FG++ N D            + C+G  PRGY +VAEA     
Sbjct: 56  FCRLGEIVPYEDFMGKPGFGLVGNKDNSNSSHMSMCNGYLCSGFYPRGYVSVAEAVSSST 115

Query: 294 XXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAW 115
                                      +   + +R   GMGS  Y+ LK+RQVKIETEAW
Sbjct: 116 DVEEDVSVVEEVQELLQEMRREEAREKELIRRKER---GMGSKKYQMLKKRQVKIETEAW 172

Query: 114 KQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           + A  EY+ELLMDMC + LAPNLPYMKSLFLGWFEP R
Sbjct: 173 EWAVKEYKELLMDMCEKKLAPNLPYMKSLFLGWFEPFR 210


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score =  139 bits (349), Expect = 2e-30
 Identities = 94/232 (40%), Positives = 116/232 (50%), Gaps = 6/232 (2%)
 Frame = -3

Query: 678 SNKFDHFVICXXXXXXXXNPEKISSAMWRNAAKQ--VISFHLKKPFS---RVYSFLGVSQ 514
           SNKF + +          N  +IS+AMWR+ A++  +    L +  S   R + F+G SQ
Sbjct: 14  SNKFVYLIQVDKATFCPPNSSRISTAMWRHIARRASLTKVRLSRDSSSILRTFGFMGFSQ 73

Query: 513 GSIISRERVHFGCLDMVYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCN-GLCP 337
            SI++     F     +     E    R GEL S  D +GR   G  RN          P
Sbjct: 74  DSILNDTTRPFELKSSMSFRFSERSFLRNGELPSKEDELGRPILGCFRNPISPPRLSNHP 133

Query: 336 RGYATVAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYE 157
           +GYA+VAEA                               +    K  ++  GMG G Y 
Sbjct: 134 KGYASVAEAVCSMDAEEDLSAIDEIQELLEEMGKEEKKELELRDQKQIKLVGGMGQGKYL 193

Query: 156 SLKRRQVKIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
            L+RRQVKIETEAW+QAA EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 194 LLRRRQVKIETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLR 245


>emb|CDP02357.1| unnamed protein product [Coffea canephora]
          Length = 1040

 Score =  139 bits (349), Expect = 2e-30
 Identities = 94/223 (42%), Positives = 112/223 (50%), Gaps = 17/223 (7%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVISFHLK--------KPFS--RVYSFLGVSQGSIISRERVHFGCL 472
           P +IS+ MW+N AK V S  L+         P S  R YSFLG SQ SI   E+  F  L
Sbjct: 32  PPEISTVMWKNIAKLVSSRTLRTQEFGSIFNPHSLPRTYSFLGFSQDSIFP-EKFKFSTL 90

Query: 471 DM---VYRGIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXX 301
           D       G  E G  ++GE  +  + + R S    RN     NGL  + YA++AEA   
Sbjct: 91  DFNPCSGNGFLEQGFRKVGEFSTRDEFLARPSLNFARNQ-ISINGLSQKSYASLAEAIAV 149

Query: 300 XXXXXXXXXXXXXXXXXXXXXXXXXXXRDKGAG----KWQRVASGMGSGNYESLKRRQVK 133
                                        +       K  R   GMGS  Y +LKRRQVK
Sbjct: 150 SSTDVEEDTSVVAADEVHELLSEMKKEDRRQMSFRWRKHHRAVYGMGSKKYHALKRRQVK 209

Query: 132 IETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPL 4
           IETEAW+QAA+EY+ELL DMC   LAPNLPYMKSLFLGWFEPL
Sbjct: 210 IETEAWEQAANEYKELLNDMCEHKLAPNLPYMKSLFLGWFEPL 252


>ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Pyrus x bretschneideri]
          Length = 1025

 Score =  137 bits (345), Expect = 6e-30
 Identities = 85/212 (40%), Positives = 106/212 (50%), Gaps = 5/212 (2%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVISFHLK-----KPFSRVYSFLGVSQGSIISRERVHFGCLDMVYR 457
           P  I +++WRN AKQ I  + +     +  SR YS LG S+ S+  +    F        
Sbjct: 29  PSMIFTSLWRNLAKQAIPRNQRGRLNSQSISRAYSLLGFSRESVSPQSFKPFQLGSYSNM 88

Query: 456 GIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXXXXX 277
           G  EVG    GE+ +    +G  S+  +R      NG  PRGYA+VAE            
Sbjct: 89  GFPEVGFPGKGEISTGESYMGNPSYWSVRT-PIGFNGFFPRGYASVAEVVSSTDAEEDVS 147

Query: 276 XXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADE 97
                               D       R   GMG   Y +LKRRQ+KIETEAW++AA E
Sbjct: 148 LVDEVQELLQQMSKEGKRQTDHWRRMRLRRVRGMGQAKYFALKRRQIKIETEAWERAAKE 207

Query: 96  YRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           YREL+MDMC   LAPNLPYMKSLFLGWFEP+R
Sbjct: 208 YRELMMDMCEHKLAPNLPYMKSLFLGWFEPMR 239


>ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2,
           chloroplastic/mitochondrial [Malus domestica]
          Length = 1025

 Score =  135 bits (340), Expect = 2e-29
 Identities = 84/212 (39%), Positives = 105/212 (49%), Gaps = 5/212 (2%)
 Frame = -3

Query: 621 PEKISSAMWRNAAKQVISFHLK-----KPFSRVYSFLGVSQGSIISRERVHFGCLDMVYR 457
           P  IS+++WRN AKQ I  + +     +  SR YS L  S  S+  +    F        
Sbjct: 29  PSMISTSLWRNLAKQAIPRNQRGRLNSQSISRAYSLLCFSXESVSPQXFKPFQLGSYSNM 88

Query: 456 GIHEVGSSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXXXXX 277
           G  EVG    GE+ +    +G  S+  +R      NG C +GYA+VAE            
Sbjct: 89  GFPEVGFPGKGEISTSESYLGNPSYWSVRT-PIGFNGFCAKGYASVAEVVSSTDAEEDVS 147

Query: 276 XXXXXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADE 97
                               D       R   GMG   Y +LKRRQ+KIETEAW++AA E
Sbjct: 148 LVDEVQELLQQMSKEGKRQTDHWRRMRLRRVRGMGQAKYLALKRRQIKIETEAWERAAKE 207

Query: 96  YRELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           YREL+MDMC   LAPNLPYMKSLFLGWFEP+R
Sbjct: 208 YRELMMDMCEHKLAPNLPYMKSLFLGWFEPMR 239


>ref|XP_010261429.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X3 [Nelumbo
           nucifera]
          Length = 923

 Score =  129 bits (323), Expect = 2e-27
 Identities = 85/209 (40%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
 Frame = -3

Query: 600 MWRNAAKQVISFHL----KKPFSRVYSFLGVSQGSIISRERVHFGCLDMVYRGIHEVGSS 433
           MWRN  KQ  S +          R +  +G SQ  +   +   F     +  G  E    
Sbjct: 1   MWRNIVKQACSTNFFSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESCFL 60

Query: 432 RIGELLSHGDSVGRTSFGVLRNNDFWCNGLC-----PRGYATVAEAXXXXXXXXXXXXXX 268
           R GE  S  D +G  SFG  RN+     GL      P+GYA+VAE               
Sbjct: 61  RNGESPSKEDDLGILSFGCFRNS----MGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVD 116

Query: 267 XXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADEYRE 88
                            +    K  ++  GMG G Y  L+RRQVKIETEAW+QAA EY+E
Sbjct: 117 EIQELLEEMSKEEKEL-EFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKE 175

Query: 87  LLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           LLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 176 LLMDMCEQKLAPNLPYMKSLFLGWFEPLR 204


>ref|XP_010261422.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X2 [Nelumbo
           nucifera]
          Length = 942

 Score =  129 bits (323), Expect = 2e-27
 Identities = 85/209 (40%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
 Frame = -3

Query: 600 MWRNAAKQVISFHL----KKPFSRVYSFLGVSQGSIISRERVHFGCLDMVYRGIHEVGSS 433
           MWRN  KQ  S +          R +  +G SQ  +   +   F     +  G  E    
Sbjct: 1   MWRNIVKQACSTNFFSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESCFL 60

Query: 432 RIGELLSHGDSVGRTSFGVLRNNDFWCNGLC-----PRGYATVAEAXXXXXXXXXXXXXX 268
           R GE  S  D +G  SFG  RN+     GL      P+GYA+VAE               
Sbjct: 61  RNGESPSKEDDLGILSFGCFRNS----MGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVD 116

Query: 267 XXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADEYRE 88
                            +    K  ++  GMG G Y  L+RRQVKIETEAW+QAA EY+E
Sbjct: 117 EIQELLEEMSKEEKEL-EFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKE 175

Query: 87  LLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           LLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 176 LLMDMCEQKLAPNLPYMKSLFLGWFEPLR 204


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial-like isoform X1 [Nelumbo
           nucifera]
          Length = 990

 Score =  129 bits (323), Expect = 2e-27
 Identities = 85/209 (40%), Positives = 101/209 (48%), Gaps = 9/209 (4%)
 Frame = -3

Query: 600 MWRNAAKQVISFHL----KKPFSRVYSFLGVSQGSIISRERVHFGCLDMVYRGIHEVGSS 433
           MWRN  KQ  S +          R +  +G SQ  +   +   F     +  G  E    
Sbjct: 1   MWRNIVKQACSTNFFSRDSSSMLRTFGVVGYSQYPVFHDKARQFEFKSSINAGFSESCFL 60

Query: 432 RIGELLSHGDSVGRTSFGVLRNNDFWCNGLC-----PRGYATVAEAXXXXXXXXXXXXXX 268
           R GE  S  D +G  SFG  RN+     GL      P+GYA+VAE               
Sbjct: 61  RNGESPSKEDDLGILSFGCFRNS----MGLSRFSNHPKGYASVAEVLSSTDAEEDVSVVD 116

Query: 267 XXXXXXXXXXXXXXXXRDKGAGKWQRVASGMGSGNYESLKRRQVKIETEAWKQAADEYRE 88
                            +    K  ++  GMG G Y  L+RRQVKIETEAW+QAA EY+E
Sbjct: 117 EIQELLEEMSKEEKEL-EFSHQKQTKLVGGMGQGKYLLLRRRQVKIETEAWEQAAKEYKE 175

Query: 87  LLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           LLMDMC Q LAPNLPYMKSLFLGWFEPLR
Sbjct: 176 LLMDMCEQKLAPNLPYMKSLFLGWFEPLR 204


>ref|XP_010029435.1| PREDICTED: DNA-directed RNA polymerase 2B,
           chloroplastic/mitochondrial [Eucalyptus grandis]
          Length = 1027

 Score =  128 bits (321), Expect = 4e-27
 Identities = 86/210 (40%), Positives = 104/210 (49%), Gaps = 10/210 (4%)
 Frame = -3

Query: 600 MWRNAAK-QVISFHLKKPF-----SRVYSFLGVSQGSIISRERVHFGCLDMVYRGIHEVG 439
           MWR AAK   +    + P      SR  SFLG+ Q       ++  G  +++ R      
Sbjct: 39  MWRTAAKLAALGAPRRVPAAARRCSRACSFLGLPQEPAPDSGKLRLGFPEVLPR------ 92

Query: 438 SSRIGELLSHGDSVGRTSFGVLRNNDFWCNGLCPRGYATVAEAXXXXXXXXXXXXXXXXX 259
             R GE+ S+ D VGR SFG+         G CP+GYA+VAEA                 
Sbjct: 93  --RSGEVSSNEDFVGRPSFGL------GLTGFCPKGYASVAEAEVASSTDVEEEVSVAEE 144

Query: 258 XXXXXXXXXXXXXRDKGAGKWQR----VASGMGSGNYESLKRRQVKIETEAWKQAADEYR 91
                          K    W R     A GMGS  Y  L+RRQVK E EAW++AA+EY+
Sbjct: 145 EEVKELLEEMTKAERKEKVYWNRQRNLAARGMGSTKYHRLRRRQVKAECEAWQRAANEYK 204

Query: 90  ELLMDMCAQNLAPNLPYMKSLFLGWFEPLR 1
           ELL DMC   LAPNLPYMKSLFLGWFEPLR
Sbjct: 205 ELLNDMCEHKLAPNLPYMKSLFLGWFEPLR 234