BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00021872
         (1233 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493427.1| PREDICTED: DNA-binding protein RHL1-like iso...   498   e-138
ref|XP_006493426.1| PREDICTED: DNA-binding protein RHL1-like iso...   498   e-138
ref|XP_006441427.1| hypothetical protein CICLE_v10020398mg [Citr...   492   e-136
ref|XP_007029353.1| Root hair initiation protein root hairless 1...   389   e-105
ref|XP_007029354.1| Root hair initiation protein root hairless 1...   385   e-104
ref|XP_012476898.1| PREDICTED: DNA-binding protein RHL1 isoform ...   376   e-101
gb|KDO46153.1| hypothetical protein CISIN_1g041903mg [Citrus sin...   375   e-101
gb|KHG02256.1| DNA-binding RHL1 -like protein [Gossypium arboreum]    374   e-100
gb|KJB26811.1| hypothetical protein B456_004G262200 [Gossypium r...   371   e-100
gb|KJB26812.1| hypothetical protein B456_004G262200 [Gossypium r...   371   e-100
ref|XP_012476897.1| PREDICTED: DNA-binding protein RHL1 isoform ...   371   e-100
gb|KJB26809.1| hypothetical protein B456_004G262200 [Gossypium r...   371   e-100
ref|XP_012476899.1| PREDICTED: DNA-binding protein RHL1 isoform ...   371   e-100
ref|XP_012476900.1| PREDICTED: DNA-binding protein RHL1 isoform ...   369   2e-99
ref|XP_012476896.1| PREDICTED: DNA-binding protein RHL1 isoform ...   369   2e-99
ref|XP_012476895.1| PREDICTED: DNA-binding protein RHL1 isoform ...   369   2e-99
gb|KJB26814.1| hypothetical protein B456_004G262200 [Gossypium r...   369   2e-99
ref|XP_007029355.1| Root hair initiation protein root hairless 1...   363   8e-99
ref|XP_007029352.1| Root hair initiation protein root hairless 1...   363   2e-97
ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 [Vitis v...   363   2e-97

>ref|XP_006493427.1| PREDICTED: DNA-binding protein RHL1-like isoform X2 [Citrus sinensis]
          Length = 368

 Score =  498 bits (1282), Expect = e-138
 Identities = 260/367 (70%), Positives = 288/367 (78%), Gaps = 6/367 (1%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNVDRTRLKNLAIRKKIIAENPAKGFTHLGPTKQVIKHHGKDILR 990
            MV  S++   KN+EDKNV+RTRLKNLAIR+KI+AENPA+GF  LGPTKQVIKHHGKDILR
Sbjct: 1    MVNPSTSKSKKNEEDKNVERTRLKNLAIRRKIVAENPARGFAPLGPTKQVIKHHGKDILR 60

Query: 989  KSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPENRY 810
            KSSQRKNRFLFSFPGLLAP GGG+IGELKNLGTQNPILYLDFPQG+MKLFGTI+YPENRY
Sbjct: 61   KSSQRKNRFLFSFPGLLAPKGGGRIGELKNLGTQNPILYLDFPQGRMKLFGTILYPENRY 120

Query: 809  LTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYDFKG 630
            LTLQFSRGGKNVMCED FDNMIVFSD WWIGKRDENP+EARL+FPKELSEGQN+EYDFKG
Sbjct: 121  LTLQFSRGGKNVMCEDYFDNMIVFSDGWWIGKRDENPDEARLDFPKELSEGQNVEYDFKG 180

Query: 629  GAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTARKKF 450
            GAGEAS  KQGV K   K+LE++S EAECEDEFSD            PVR+S RTA KKF
Sbjct: 181  GAGEAS--KQGVHKTGMKELEEISTEAECEDEFSDAEKKLKETMETTPVRHSSRTAGKKF 238

Query: 449  NFAEVSSEDDPDENDADMSEGEEKKTDP------DVDSEDAAEKNDSSKQILSSIQPXXX 288
             F+E+ SED+PDE  AD+SEGEEKK         DVDSE+AAEKN SSK+I SSI+P   
Sbjct: 239  KFSEMFSEDNPDEKVADISEGEEKKMGNPGSVVLDVDSENAAEKNGSSKKIQSSIEPVAK 298

Query: 287  XXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXXXXXXXXXXXSGQKLQHND 108
                      S +DS +NHSSLVQATISTLFKKV +KN             S QKLQ N 
Sbjct: 299  NKKISKSAAKSRDDSGSNHSSLVQATISTLFKKVGKKNSPSSSKKSSGSKASAQKLQPNG 358

Query: 107  LKRNVDQ 87
            LK N+DQ
Sbjct: 359  LKSNIDQ 365


>ref|XP_006493426.1| PREDICTED: DNA-binding protein RHL1-like isoform X1 [Citrus sinensis]
          Length = 382

 Score =  498 bits (1282), Expect = e-138
 Identities = 260/367 (70%), Positives = 288/367 (78%), Gaps = 6/367 (1%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNVDRTRLKNLAIRKKIIAENPAKGFTHLGPTKQVIKHHGKDILR 990
            MV  S++   KN+EDKNV+RTRLKNLAIR+KI+AENPA+GF  LGPTKQVIKHHGKDILR
Sbjct: 1    MVNPSTSKSKKNEEDKNVERTRLKNLAIRRKIVAENPARGFAPLGPTKQVIKHHGKDILR 60

Query: 989  KSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPENRY 810
            KSSQRKNRFLFSFPGLLAP GGG+IGELKNLGTQNPILYLDFPQG+MKLFGTI+YPENRY
Sbjct: 61   KSSQRKNRFLFSFPGLLAPKGGGRIGELKNLGTQNPILYLDFPQGRMKLFGTILYPENRY 120

Query: 809  LTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYDFKG 630
            LTLQFSRGGKNVMCED FDNMIVFSD WWIGKRDENP+EARL+FPKELSEGQN+EYDFKG
Sbjct: 121  LTLQFSRGGKNVMCEDYFDNMIVFSDGWWIGKRDENPDEARLDFPKELSEGQNVEYDFKG 180

Query: 629  GAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTARKKF 450
            GAGEAS  KQGV K   K+LE++S EAECEDEFSD            PVR+S RTA KKF
Sbjct: 181  GAGEAS--KQGVHKTGMKELEEISTEAECEDEFSDAEKKLKETMETTPVRHSSRTAGKKF 238

Query: 449  NFAEVSSEDDPDENDADMSEGEEKKTDP------DVDSEDAAEKNDSSKQILSSIQPXXX 288
             F+E+ SED+PDE  AD+SEGEEKK         DVDSE+AAEKN SSK+I SSI+P   
Sbjct: 239  KFSEMFSEDNPDEKVADISEGEEKKMGNPGSVVLDVDSENAAEKNGSSKKIQSSIEPVAK 298

Query: 287  XXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXXXXXXXXXXXSGQKLQHND 108
                      S +DS +NHSSLVQATISTLFKKV +KN             S QKLQ N 
Sbjct: 299  NKKISKSAAKSRDDSGSNHSSLVQATISTLFKKVGKKNSPSSSKKSSGSKASAQKLQPNG 358

Query: 107  LKRNVDQ 87
            LK N+DQ
Sbjct: 359  LKSNIDQ 365


>ref|XP_006441427.1| hypothetical protein CICLE_v10020398mg [Citrus clementina]
            gi|557543689|gb|ESR54667.1| hypothetical protein
            CICLE_v10020398mg [Citrus clementina]
          Length = 408

 Score =  492 bits (1266), Expect = e-136
 Identities = 266/397 (67%), Positives = 295/397 (74%), Gaps = 8/397 (2%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNVDRTRLKNLAIRKKIIAENPAKGFTHLGPTKQVIKHHGKDILR 990
            MV  S++   KN+EDKNV+RTRLKNLAIR+KI+AENPA+GF  LGP+KQVIKHHGKDILR
Sbjct: 1    MVNPSTSKSKKNEEDKNVERTRLKNLAIRRKIVAENPARGFAPLGPSKQVIKHHGKDILR 60

Query: 989  KSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPENRY 810
            KSSQRKNRFLFSFPGLLAP GGG+IGELKNLGTQNPILYLDFPQG+MKLFGTI+YPENRY
Sbjct: 61   KSSQRKNRFLFSFPGLLAPKGGGRIGELKNLGTQNPILYLDFPQGRMKLFGTILYPENRY 120

Query: 809  LTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYDFKG 630
            LTLQFSRGGKNVMCED FDNMIVFSD WWIGKRDENP+EARL+FPKELSEGQN+EYDFKG
Sbjct: 121  LTLQFSRGGKNVMCEDYFDNMIVFSDGWWIGKRDENPDEARLDFPKELSEGQNVEYDFKG 180

Query: 629  GAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTARKKF 450
            GAGEAS  KQGV K   K+LE++S EAECEDEFSD            PV++S RTA KKF
Sbjct: 181  GAGEAS--KQGVHKTGMKELEEISTEAECEDEFSDAEKKLKEKMETTPVQHSSRTAGKKF 238

Query: 449  NFAEVSSEDDPDENDADMSEGEEKKTDP------DVDSEDAAEKNDSSKQILSSIQPXXX 288
             F+E+ SED+PDE  AD+SEGEEKK         DVDS +AAEKN SSK+I S I+P   
Sbjct: 239  KFSEMFSEDNPDEKVADISEGEEKKMGNPGSVVLDVDSGNAAEKNGSSKKIQSPIEPVAK 298

Query: 287  XXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXXXXXXXXXXXSGQKLQHND 108
                      S +D  +NHSSLVQATISTLFKKV +KN             S QKLQ N 
Sbjct: 299  NKKISKSAAKSRDDLGSNHSSLVQATISTLFKKVGKKNSPSSSKKSSGSKASAQKLQPNG 358

Query: 107  LKRNVDQAXXXXXXXXXXXXKS--TGTSNKAKKRESE 3
            LK N DQ             KS   GT  KAKKR SE
Sbjct: 359  LKSNSDQDKVPKGKRKIIKEKSIVLGTRKKAKKRISE 395


>ref|XP_007029353.1| Root hair initiation protein root hairless 1, putative isoform 2
            [Theobroma cacao] gi|508717958|gb|EOY09855.1| Root hair
            initiation protein root hairless 1, putative isoform 2
            [Theobroma cacao]
          Length = 436

 Score =  389 bits (1000), Expect = e-105
 Identities = 224/413 (54%), Positives = 264/413 (63%), Gaps = 24/413 (5%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MV+ SS+ K    E     +R RLK LA++  ++++ PA  K +  L P+K V+KHHGKD
Sbjct: 1    MVRTSSSKKPPIAETPEATERKRLKKLALKNNLLSDTPATPKSYVPLSPSKLVMKHHGKD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYLTL FSRGGKNVMCED FDNMIVFSDAWWIGK+DENPEEARL+FPKEL +GQ +EYD
Sbjct: 120  NRYLTLLFSRGGKNVMCEDYFDNMIVFSDAWWIGKKDENPEEARLDFPKELCQGQQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  SVNKQ  P+ E KQ+E  S + E  D  SD            P R+S R A 
Sbjct: 180  FKGGAGVESVNKQDTPRTEIKQVEIESLDNESGDALSDDDNDLTAKMEVTPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK-------TDPD-----------VDSEDAAEKN 333
            K+F FAE SSEDDP  +DA+ S+GEEKK       T+ D           V   DAAE +
Sbjct: 240  KRFKFAEASSEDDPVRSDAEPSDGEEKKVGKKLHLTENDTIGKTISSASLVLKSDAAEDS 299

Query: 332  DSSKQI---LSSIQPXXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
               +QI   L+S+               S E+S  N  SLVQ TISTLFKKV EK     
Sbjct: 300  QIPEQIQTSLTSVSKSRKISKSTVTVTKSKENSKANRGSLVQPTISTLFKKVGEKKGPRG 359

Query: 161  XXXXXXXXXSGQKLQHNDLKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                      G+KLQ N+ KR +DQ             K+TGT  K KK+ESE
Sbjct: 360  SDKSSSTKVLGKKLQSNNYKRKIDQTEGSSKKGKVNEEKTTGTGIKRKKKESE 412


>ref|XP_007029354.1| Root hair initiation protein root hairless 1, putative isoform 3
            [Theobroma cacao] gi|508717959|gb|EOY09856.1| Root hair
            initiation protein root hairless 1, putative isoform 3
            [Theobroma cacao]
          Length = 435

 Score =  385 bits (989), Expect = e-104
 Identities = 224/413 (54%), Positives = 264/413 (63%), Gaps = 24/413 (5%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MV+ SS+ K    E     +R RLK LA++  ++++ PA  K +  L P+K V+KHHGKD
Sbjct: 1    MVRTSSSKKPPIAETPEATERKRLKKLALKNNLLSDTPATPKSYVPLSPSKLVMKHHGKD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYLTL FSRGGKNVMCED FDNMIVFSDAWWIGK+DENPEEARL+FPKEL +GQ +EYD
Sbjct: 120  NRYLTLLFSRGGKNVMCEDYFDNMIVFSDAWWIGKKDENPEEARLDFPKELCQGQQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  SVNKQ  P+ E KQ+E  S + E  D  SD            P R+S R A 
Sbjct: 180  FKGGAGVESVNKQDTPRTEIKQVEIESLDNESGDALSDDDNDLTAKMEVTPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK-------TDPD-----------VDSEDAAEKN 333
            K+F FAE SSEDDP  +DA+ S+GEEKK       T+ D           V   DAAE +
Sbjct: 240  KRFKFAEASSEDDPVRSDAEPSDGEEKKVGKKLHLTENDTIGKTISSASLVLKSDAAEDS 299

Query: 332  DSSKQI---LSSIQPXXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
               +QI   L+S+               S E+S  N  SLVQ TISTLFKKV EK     
Sbjct: 300  QIPEQIQTSLTSVSKSRKISKSTVTVTKSKENSKANRGSLVQPTISTLFKKVGEKG-PRG 358

Query: 161  XXXXXXXXXSGQKLQHNDLKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                      G+KLQ N+ KR +DQ             K+TGT  K KK+ESE
Sbjct: 359  SDKSSSTKVLGKKLQSNNYKRKIDQTEGSSKKGKVNEEKTTGTGIKRKKKESE 411


>ref|XP_012476898.1| PREDICTED: DNA-binding protein RHL1 isoform X4 [Gossypium raimondii]
            gi|763759482|gb|KJB26813.1| hypothetical protein
            B456_004G262200 [Gossypium raimondii]
          Length = 435

 Score =  376 bits (966), Expect = e-101
 Identities = 214/413 (51%), Positives = 263/413 (63%), Gaps = 24/413 (5%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK     
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEKG-PRS 358

Query: 161  XXXXXXXXXSGQKLQHNDLKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                     SG+K Q  + ++ V Q             +++G   K KK ESE
Sbjct: 359  SDKSSPSKVSGKKSQCKNSEKKVGQNDGSSKKGKVIKGRTSGAGTKRKKEESE 411


>gb|KDO46153.1| hypothetical protein CISIN_1g041903mg [Citrus sinensis]
          Length = 214

 Score =  375 bits (963), Expect = e-101
 Identities = 181/215 (84%), Positives = 198/215 (92%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNVDRTRLKNLAIRKKIIAENPAKGFTHLGPTKQVIKHHGKDILR 990
            MV  S++   KN+EDKNV+RTRLKNLAIR+KI+AENPA+GF  LGP+KQVIKHHGKDILR
Sbjct: 1    MVNPSTSKSKKNEEDKNVERTRLKNLAIRRKIVAENPARGFAPLGPSKQVIKHHGKDILR 60

Query: 989  KSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPENRY 810
            KSSQRKNRFLFSFPGLLAP GGG+IGELKNLGTQNPILYLDFPQG+MKLFGTI+YPENRY
Sbjct: 61   KSSQRKNRFLFSFPGLLAPKGGGRIGELKNLGTQNPILYLDFPQGRMKLFGTILYPENRY 120

Query: 809  LTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYDFKG 630
            LTLQFSRGGKNVMCED FDNMIVFSD WWIGKRDENP+EARL+FPKELSEGQN+EYDFKG
Sbjct: 121  LTLQFSRGGKNVMCEDYFDNMIVFSDGWWIGKRDENPDEARLDFPKELSEGQNVEYDFKG 180

Query: 629  GAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSD 525
            GAGEAS  KQGV K   K+LE++S EAECEDEFSD
Sbjct: 181  GAGEAS--KQGVHKTGMKELEEISTEAECEDEFSD 213


>gb|KHG02256.1| DNA-binding RHL1 -like protein [Gossypium arboreum]
          Length = 494

 Score =  374 bits (959), Expect = e-100
 Identities = 203/354 (57%), Positives = 244/354 (68%), Gaps = 23/354 (6%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHGKD
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGKD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EGQ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGQQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDESNLKVKMEATPTRHSTRNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK-----------------TDPDVDSEDAAEKND 330
            K+F FAE SSE+D   +DA+ S+GEEK+                 + P V   D +E N 
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDGEEKRVGLKLDFSDNDILQPITSAPLVLGSDDSEDNQ 299

Query: 329  SSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
             SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK
Sbjct: 300  VSKQIRTNLIPVTKSKKPTQTTVTVTKSKENSNTSHGSLVQATISTLFKKAEEK 353


>gb|KJB26811.1| hypothetical protein B456_004G262200 [Gossypium raimondii]
          Length = 431

 Score =  371 bits (953), Expect = e-100
 Identities = 211/412 (51%), Positives = 259/412 (62%), Gaps = 23/412 (5%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK-----------------TDPDVDSEDAAEKND 330
            K+F FAE SSE+D   +DA+ S+ EEKK                 + P V   D +E N 
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDILQPITSAPVVLGSDDSEDNQ 299

Query: 329  SSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXXX 159
             SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK      
Sbjct: 300  VSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEKGPRSSD 359

Query: 158  XXXXXXXXSGQKLQHNDLKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                      +    N  K+N   +            +++G   K KK ESE
Sbjct: 360  KSSPSKVSGKKSQCKNSEKKNDGSS----KKGKVIKGRTSGAGTKRKKEESE 407


>gb|KJB26812.1| hypothetical protein B456_004G262200 [Gossypium raimondii]
          Length = 432

 Score =  371 bits (952), Expect = e-100
 Identities = 211/413 (51%), Positives = 259/413 (62%), Gaps = 24/413 (5%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVLQPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK     
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEKGPRSS 359

Query: 161  XXXXXXXXXSGQKLQHNDLKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                       +    N  K+N   +            +++G   K KK ESE
Sbjct: 360  DKSSPSKVSGKKSQCKNSEKKNDGSS----KKGKVIKGRTSGAGTKRKKEESE 408


>ref|XP_012476897.1| PREDICTED: DNA-binding protein RHL1 isoform X3 [Gossypium raimondii]
            gi|763759479|gb|KJB26810.1| hypothetical protein
            B456_004G262200 [Gossypium raimondii]
          Length = 442

 Score =  371 bits (952), Expect = e-100
 Identities = 214/420 (50%), Positives = 265/420 (63%), Gaps = 31/420 (7%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK     
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEKG-PRS 358

Query: 161  XXXXXXXXXSGQKLQHND-------LKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                     SG+K Q  +       +K ++D+             +++G   K KK ESE
Sbjct: 359  SDKSSPSKVSGKKSQCKNSEKKVGQVKLSLDKNDGSSKKGKVIKGRTSGAGTKRKKEESE 418


>gb|KJB26809.1| hypothetical protein B456_004G262200 [Gossypium raimondii]
          Length = 442

 Score =  371 bits (952), Expect = e-100
 Identities = 214/420 (50%), Positives = 265/420 (63%), Gaps = 31/420 (7%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVLQPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK     
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEKG-PRS 358

Query: 161  XXXXXXXXXSGQKLQHND-------LKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                     SG+K Q  +       +K ++D+             +++G   K KK ESE
Sbjct: 359  SDKSSPSKVSGKKSQCKNSEKKVGQVKLSLDKNDGSSKKGKVIKGRTSGAGTKRKKEESE 418


>ref|XP_012476899.1| PREDICTED: DNA-binding protein RHL1 isoform X5 [Gossypium raimondii]
            gi|763759477|gb|KJB26808.1| hypothetical protein
            B456_004G262200 [Gossypium raimondii]
            gi|763759484|gb|KJB26815.1| hypothetical protein
            B456_004G262200 [Gossypium raimondii]
          Length = 432

 Score =  371 bits (952), Expect = e-100
 Identities = 211/413 (51%), Positives = 259/413 (62%), Gaps = 24/413 (5%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXX 162
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK     
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEKGPRSS 359

Query: 161  XXXXXXXXXSGQKLQHNDLKRNVDQAXXXXXXXXXXXXKSTGTSNKAKKRESE 3
                       +    N  K+N   +            +++G   K KK ESE
Sbjct: 360  DKSSPSKVSGKKSQCKNSEKKNDGSS----KKGKVIKGRTSGAGTKRKKEESE 408


>ref|XP_012476900.1| PREDICTED: DNA-binding protein RHL1 isoform X6 [Gossypium raimondii]
          Length = 383

 Score =  369 bits (948), Expect = 2e-99
 Identities = 201/355 (56%), Positives = 243/355 (68%), Gaps = 24/355 (6%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEK 354


>ref|XP_012476896.1| PREDICTED: DNA-binding protein RHL1 isoform X2 [Gossypium raimondii]
          Length = 450

 Score =  369 bits (948), Expect = 2e-99
 Identities = 201/355 (56%), Positives = 243/355 (68%), Gaps = 24/355 (6%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEK 354


>ref|XP_012476895.1| PREDICTED: DNA-binding protein RHL1 isoform X1 [Gossypium raimondii]
          Length = 457

 Score =  369 bits (948), Expect = 2e-99
 Identities = 201/355 (56%), Positives = 243/355 (68%), Gaps = 24/355 (6%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEK 354


>gb|KJB26814.1| hypothetical protein B456_004G262200 [Gossypium raimondii]
          Length = 447

 Score =  369 bits (948), Expect = 2e-99
 Identities = 201/355 (56%), Positives = 243/355 (68%), Gaps = 24/355 (6%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MVKASS+ K    E     +R RLK LA++  ++++ PA  K +  L P+KQVIKHHG+D
Sbjct: 1    MVKASSSKKPPIAETPEATERRRLKKLALKNNLLSDTPAAPKSYVPLSPSKQVIKHHGRD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYL+L FSRGGKNVMC+D FDNMIVFSDAWWIGK+DENP+E RL+FPKEL EG+ +EYD
Sbjct: 120  NRYLSLLFSRGGKNVMCDDYFDNMIVFSDAWWIGKKDENPDEVRLDFPKELFEGEQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  S+NKQG+P+ E KQ +  S + E ED  SD            P R+S R A 
Sbjct: 180  FKGGAGVTSINKQGIPRTEMKQADTESLDTESEDALSDDETSLKVKMEATPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK------------------TDPDVDSEDAAEKN 333
            K+F FAE SSE+D   +DA+ S+ EEKK                  + P V   D +E N
Sbjct: 240  KRFKFAEASSEEDTVRSDAEPSDEEEKKVGLKLDFSDNDIVAKPITSAPVVLGSDDSEDN 299

Query: 332  DSSKQILSSIQP---XXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
              SKQI +++ P                S E+S+ +H SLVQATISTLFKK EEK
Sbjct: 300  QVSKQIQTNLIPVTKFKKTTQTTVTVPKSKENSNTSHGSLVQATISTLFKKAEEK 354


>ref|XP_007029355.1| Root hair initiation protein root hairless 1, putative isoform 4
            [Theobroma cacao] gi|508717960|gb|EOY09857.1| Root hair
            initiation protein root hairless 1, putative isoform 4
            [Theobroma cacao]
          Length = 406

 Score =  363 bits (933), Expect(2) = 8e-99
 Identities = 205/355 (57%), Positives = 240/355 (67%), Gaps = 24/355 (6%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MV+ SS+ K    E     +R RLK LA++  ++++ PA  K +  L P+K V+KHHGKD
Sbjct: 1    MVRTSSSKKPPIAETPEATERKRLKKLALKNNLLSDTPATPKSYVPLSPSKLVMKHHGKD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYLTL FSRGGKNVMCED FDNMIVFSDAWWIGK+DENPEEARL+FPKEL +GQ +EYD
Sbjct: 120  NRYLTLLFSRGGKNVMCEDYFDNMIVFSDAWWIGKKDENPEEARLDFPKELCQGQQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  SVNKQ  P+ E KQ+E  S + E  D  SD            P R+S R A 
Sbjct: 180  FKGGAGVESVNKQDTPRTEIKQVEIESLDNESGDALSDDDNDLTAKMEVTPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKK-------TDPD-----------VDSEDAAEKN 333
            K+F FAE SSEDDP  +DA+ S+GEEKK       T+ D           V   DAAE +
Sbjct: 240  KRFKFAEASSEDDPVRSDAEPSDGEEKKVGKKLHLTENDTIGKTISSASLVLKSDAAEDS 299

Query: 332  DSSKQI---LSSIQPXXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
               +QI   L+S+               S E+S  N  SLVQ TISTLFKKV EK
Sbjct: 300  QIPEQIQTSLTSVSKSRKISKSTVTVTKSKENSKANRGSLVQPTISTLFKKVGEK 354



 Score = 26.6 bits (57), Expect(2) = 8e-99
 Identities = 17/33 (51%), Positives = 18/33 (54%)
 Frame = -3

Query: 181 KRMPQAVQKNLQH*KLLGRSCSIMI*NVMLIRL 83
           KR    VQ NL   K L RSCS +I    LIRL
Sbjct: 354 KRRDLEVQINLHPQKFLARSCSPIITKGRLIRL 386


>ref|XP_007029352.1| Root hair initiation protein root hairless 1, putative isoform 1
            [Theobroma cacao] gi|508717957|gb|EOY09854.1| Root hair
            initiation protein root hairless 1, putative isoform 1
            [Theobroma cacao]
          Length = 514

 Score =  363 bits (931), Expect = 2e-97
 Identities = 204/367 (55%), Positives = 242/367 (65%), Gaps = 6/367 (1%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNV-DRTRLKNLAIRKKIIAENPA--KGFTHLGPTKQVIKHHGKD 999
            MV+ SS+ K    E     +R RLK LA++  ++++ PA  K +  L P+K V+KHHGKD
Sbjct: 1    MVRTSSSKKPPIAETPEATERKRLKKLALKNNLLSDTPATPKSYVPLSPSKLVMKHHGKD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            ILRKS QRKNRFLFSFPGLLAP+ GGKIGELKNLG++NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILRKS-QRKNRFLFSFPGLLAPISGGKIGELKNLGSKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYLTL FSRGGKNVMCED FDNMIVFSDAWWIGK+DENPEEARL+FPKEL +GQ +EYD
Sbjct: 120  NRYLTLLFSRGGKNVMCEDYFDNMIVFSDAWWIGKKDENPEEARLDFPKELCQGQQMEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFSDVXXXXXXXXXKRPVRNSERTAR 459
            FKGGAG  SVNKQ  P+ E KQ+E  S + E  D  SD            P R+S R A 
Sbjct: 180  FKGGAGVESVNKQDTPRTEIKQVEIESLDNESGDALSDDDNDLTAKMEVTPTRHSARNAG 239

Query: 458  KKFNFAEVSSEDDPDENDADMSEGEEKKTDPDVDSEDAAEKNDSSKQI---LSSIQPXXX 288
            K+F FAE SSEDDP      + + +   +   V   DAAE +   +QI   L+S+     
Sbjct: 240  KRFKFAEASSEDDPVRT---LLQLQTISSASLVLKSDAAEDSQIPEQIQTSLTSVSKSRK 296

Query: 287  XXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEKNXXXXXXXXXXXXXSGQKLQHND 108
                      S E+S  N  SLVQ TISTLFKKV EK               G+KLQ N+
Sbjct: 297  ISKSTVTVTKSKENSKANRGSLVQPTISTLFKKVGEKKGPRGSDKSSSTKVLGKKLQSNN 356

Query: 107  LKRNVDQ 87
             KR +DQ
Sbjct: 357  YKRKIDQ 363


>ref|XP_002281960.1| PREDICTED: DNA-binding protein RHL1 [Vitis vinifera]
            gi|731421942|ref|XP_010661929.1| PREDICTED: DNA-binding
            protein RHL1 [Vitis vinifera]
          Length = 449

 Score =  363 bits (931), Expect = 2e-97
 Identities = 197/342 (57%), Positives = 239/342 (69%), Gaps = 11/342 (3%)
 Frame = -2

Query: 1169 MVKASSTSKSKNKEDKNVD---RTRLKNLAIRKKIIAENPAKGFTHLGPTKQVIKHHGKD 999
            MV+ S  +++    + N +   R R K LA  K ++++ P+K F+ L P+K VIKHHGKD
Sbjct: 1    MVRVSKKNENGGVSELNPEAEERKRRKKLAFSKNLLSDTPSKAFSALSPSKTVIKHHGKD 60

Query: 998  ILRKSSQRKNRFLFSFPGLLAPMGGGKIGELKNLGTQNPILYLDFPQGKMKLFGTIVYPE 819
            IL+KS QRKNRFLFSFPGLLAP+ GGKIGELK+LGT+NPILYLDFPQG+MKLFGTIVYP+
Sbjct: 61   ILKKS-QRKNRFLFSFPGLLAPIAGGKIGELKDLGTKNPILYLDFPQGQMKLFGTIVYPK 119

Query: 818  NRYLTLQFSRGGKNVMCEDSFDNMIVFSDAWWIGKRDENPEEARLEFPKELSEGQNLEYD 639
            NRYLTL FSRGGKNVMCED FDNMIVFSDAWWIG+++ENPEEARLEFPKELSEGQ++EYD
Sbjct: 120  NRYLTLHFSRGGKNVMCEDYFDNMIVFSDAWWIGRKEENPEEARLEFPKELSEGQSVEYD 179

Query: 638  FKGGAGEASVNKQGVPKIERKQLEDLSPEAECEDEFS------DVXXXXXXXXXKRPVRN 477
            FKGGAG AS +KQGV K E K +E  SP+ E ED+ S      DV           PVR+
Sbjct: 180  FKGGAGMASDSKQGVNKPEMKYVEPQSPKPELEDDLSGEDSLKDVVEMTPKDVEVTPVRH 239

Query: 476  SERTARKKFNFAEVSSEDDPDENDADMSEGEEK--KTDPDVDSEDAAEKNDSSKQILSSI 303
            S+RTA K FNFAE SS DD  END ++S+G+E      P+  +EDA  +  ++ QI  S 
Sbjct: 240  SQRTAGKTFNFAEASSGDDSVENDGNISDGQENSGSATPESGNEDAEARTGATTQIQESA 299

Query: 302  QPXXXXXXXXXXXXXSNEDSHNNHSSLVQATISTLFKKVEEK 177
                               +  +   L QATISTLFKKVEE+
Sbjct: 300  GA-----------------ATKSRKRLSQATISTLFKKVEEQ 324