BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00021380
         (1448 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616...   707   0.0  
ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citr...   707   0.0  
ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citr...   665   0.0  
ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I sub...   452   e-124
ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I sub...   447   e-122
emb|CBI35920.3| unnamed protein product [Vitis vinifera]              443   e-121
ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49,...   443   e-121
ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Popu...   433   e-118
ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I sub...   432   e-118
ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I sub...   431   e-118
ref|XP_012068922.1| PREDICTED: DNA-directed RNA polymerase I sub...   430   e-117
ref|XP_012068924.1| PREDICTED: DNA-directed RNA polymerase I sub...   430   e-117
ref|XP_011014273.1| PREDICTED: DNA-directed RNA polymerase I sub...   429   e-117
ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500...   429   e-117
ref|XP_011007736.1| PREDICTED: DNA-directed RNA polymerase I sub...   428   e-117
ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypep...   427   e-116
ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I sub...   424   e-116
ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prun...   423   e-115
ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 ...   418   e-114
ref|XP_004305732.2| PREDICTED: DNA-directed RNA polymerase I sub...   405   e-110

>ref|XP_006465974.1| PREDICTED: uncharacterized protein LOC102616137 [Citrus sinensis]
            gi|641846247|gb|KDO65131.1| hypothetical protein
            CISIN_1g013236mg [Citrus sinensis]
          Length = 447

 Score =  707 bits (1826), Expect = 0.0
 Identities = 355/403 (88%), Positives = 377/403 (93%), Gaps = 1/403 (0%)
 Frame = -2

Query: 1447 EPEPEPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNED-PDEEKRPRVRVYRNMNEKKN 1271
            EPE EPERVKAKVQFIPEQPNK PP+VGYFPSIYKP+ D PDEE RP+VRVYRNMNEKKN
Sbjct: 45   EPELEPERVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKN 104

Query: 1270 RTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRL 1091
            RTGRMELVVSPRDSSV+YVGTSYSGEAMAPQFCHYAVGVLD+ TQTLKIVPIAANKIFRL
Sbjct: 105  RTGRMELVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRSTQTLKIVPIAANKIFRL 164

Query: 1090 EPRVGGSDVADKEAGKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQK 911
            EPRV GSDVADK+AGK E+SAEVQANM+AMLDTRYGTKKSLRQS+KM+ALNKENDPESQK
Sbjct: 165  EPRVRGSDVADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQK 224

Query: 910  DLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYN 731
            DLALK+KSVKINKEALESTTS+ VLNVPP D NATTP QAYPLDKIILKGEWDF+QDI+N
Sbjct: 225  DLALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFN 284

Query: 730  LLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRAS 551
             +S GSEV  +AYPSFVC+RIHK++E QDDVEKQTLASIFSYITHLVKFKDQHSMDG AS
Sbjct: 285  HVSAGSEVISDAYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGAS 344

Query: 550  AKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLR 371
            AK HRIP IL+QKF+T F DAESKRLSDDKIHLLIS+VLVL LHADDFRTNPTDIAKDLR
Sbjct: 345  AKQHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLR 404

Query: 370  MSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            MSE KLRDHFEKLGCKL REKNMLYATLPVPLQFPKA QRRRR
Sbjct: 405  MSEFKLRDHFEKLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 447


>ref|XP_006426597.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528587|gb|ESR39837.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 447

 Score =  707 bits (1826), Expect = 0.0
 Identities = 355/403 (88%), Positives = 377/403 (93%), Gaps = 1/403 (0%)
 Frame = -2

Query: 1447 EPEPEPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNED-PDEEKRPRVRVYRNMNEKKN 1271
            EPE EPERVKAKVQFIPEQPNK PP+VGYFPSIYKP+ D PDEE RP+VRVYRNMNEKKN
Sbjct: 45   EPELEPERVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKN 104

Query: 1270 RTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRL 1091
            RTGRMELVVSPRDSSV+YVGTSYSGEAMAPQFCHYAVGVLD+ TQTLKIVPIAANKIFRL
Sbjct: 105  RTGRMELVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRL 164

Query: 1090 EPRVGGSDVADKEAGKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQK 911
            EPRV GSDVADK+AGK E+SAEVQANM+AMLDTRYGTKKSLRQS+KM+ALNKENDPESQK
Sbjct: 165  EPRVRGSDVADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQK 224

Query: 910  DLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYN 731
            DLALK+KSVKINKEALESTTS+ VLNVPP D NATTP QAYPLDKIILKGEWDF+QDI+N
Sbjct: 225  DLALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFN 284

Query: 730  LLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRAS 551
             +S GSEV  +AYPSFVC+RIHK++E QDDVEKQTLASIFSYITHLVKFKDQHSMDG AS
Sbjct: 285  HVSAGSEVISDAYPSFVCNRIHKLREIQDDVEKQTLASIFSYITHLVKFKDQHSMDGGAS 344

Query: 550  AKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLR 371
            AK HRIP IL+QKF+T F DAESKRLSDDKIHLLIS+VLVL LHADDFRTNPTDIAKDLR
Sbjct: 345  AKQHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLR 404

Query: 370  MSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            MSE KLRDHFEKLGCKL REKNMLYATLPVPLQFPKA QRRRR
Sbjct: 405  MSEFKLRDHFEKLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 447


>ref|XP_006426598.1| hypothetical protein CICLE_v10025597mg [Citrus clementina]
            gi|557528588|gb|ESR39838.1| hypothetical protein
            CICLE_v10025597mg [Citrus clementina]
          Length = 426

 Score =  665 bits (1716), Expect = 0.0
 Identities = 341/403 (84%), Positives = 359/403 (89%), Gaps = 1/403 (0%)
 Frame = -2

Query: 1447 EPEPEPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNED-PDEEKRPRVRVYRNMNEKKN 1271
            EPE EPERVKAKVQFIPEQPNK PP+VGYFPSIYKP+ D PDEE RP+VRVYRNMNEKKN
Sbjct: 45   EPELEPERVKAKVQFIPEQPNKAPPLVGYFPSIYKPDVDHPDEEMRPKVRVYRNMNEKKN 104

Query: 1270 RTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRL 1091
            RTGRMELVVSPRDSSV+YVGTSYSGEAMAPQFCHYAVGVLD+ TQTLKIVPIAANKIFRL
Sbjct: 105  RTGRMELVVSPRDSSVDYVGTSYSGEAMAPQFCHYAVGVLDRNTQTLKIVPIAANKIFRL 164

Query: 1090 EPRVGGSDVADKEAGKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQK 911
            EPRV GSDVADK+AGK E+SAEVQANM+AMLDTRYGTKKSLRQS+KM+ALNKENDPESQK
Sbjct: 165  EPRVRGSDVADKDAGKGEISAEVQANMKAMLDTRYGTKKSLRQSKKMHALNKENDPESQK 224

Query: 910  DLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYN 731
            DLALK+KSVKINKEALESTTS+ VLNVPP D NATTP QAYPLDKIILKGEWDF+QDI+N
Sbjct: 225  DLALKMKSVKINKEALESTTSDTVLNVPPYDANATTPQQAYPLDKIILKGEWDFVQDIFN 284

Query: 730  LLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRAS 551
             +S GSE                     DDVEKQTLASIFSYITHLVKFKDQHSMDG AS
Sbjct: 285  HVSAGSE---------------------DDVEKQTLASIFSYITHLVKFKDQHSMDGGAS 323

Query: 550  AKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLR 371
            AK HRIP IL+QKF+T F DAESKRLSDDKIHLLIS+VLVL LHADDFRTNPTDIAKDLR
Sbjct: 324  AKQHRIPKILHQKFLTSFSDAESKRLSDDKIHLLISYVLVLTLHADDFRTNPTDIAKDLR 383

Query: 370  MSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            MSE KLRDHFEKLGCKL REKNMLYATLPVPLQFPKA QRRRR
Sbjct: 384  MSEFKLRDHFEKLGCKLLREKNMLYATLPVPLQFPKAIQRRRR 426


>ref|XP_010062676.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Eucalyptus
            grandis] gi|629104338|gb|KCW69807.1| hypothetical protein
            EUGRSUZ_F03167 [Eucalyptus grandis]
          Length = 415

 Score =  452 bits (1164), Expect = e-124
 Identities = 235/406 (57%), Positives = 303/406 (74%), Gaps = 10/406 (2%)
 Frame = -2

Query: 1429 ERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNE-------DPDEEKRPRVRVYRNMNEKKN 1271
            E++ A +  +P+  +KIPP+VGYFPS + P+        DP EE  P VRVYRN      
Sbjct: 17   EKLSATIHALPDSADKIPPLVGYFPSGFDPSSGGGGGGGDPPEE--PGVRVYRN----GK 70

Query: 1270 RTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRL 1091
               R++LVV P +S+V +VG+S SGE    Q C YA+GVLDK++QTLK+VPIA NKIFRL
Sbjct: 71   WPNRLQLVVRPPESNVTFVGSSSSGEYTGVQSCTYALGVLDKESQTLKVVPIACNKIFRL 130

Query: 1090 EPRVGGSDVADKEA---GKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPE 920
            EPRV  SD+ ++E    G+ E+SA+ +A+    L+  +GTK+S+ Q +KM +L +E+DP 
Sbjct: 131  EPRVA-SDLPEEEPPELGRGEISAKEKADKVRELNLLFGTKRSVTQDKKMQSLRQEDDPN 189

Query: 919  SQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQD 740
            SQKDL  KIK V INKEALEST + I  N+PP + +AT P  AYPL+KIILKGEWD+++D
Sbjct: 190  SQKDLDRKIKEVAINKEALESTDAHIARNIPPYNSSATVPKDAYPLEKIILKGEWDYIKD 249

Query: 739  IYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDG 560
            I+  L  G +V+ +AYP+FVC+RIHK+ E QD++EK+TL  I SYI HL+KFKDQHS DG
Sbjct: 250  IFQFLEEGQKVSPDAYPTFVCNRIHKLGEMQDEMEKETLGCILSYINHLIKFKDQHSADG 309

Query: 559  RASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAK 380
             +S+KNH+IP+IL QKF TMF +AESK L  +KI LLIS+VLVL L ADDFRT+PTDIAK
Sbjct: 310  ASSSKNHKIPSILRQKFSTMFSNAESKWLPSEKIDLLISYVLVLTLFADDFRTDPTDIAK 369

Query: 379  DLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            DLRMS V +R HFE LGCK SREKN+LYA LPVPL+FP+ ++RRRR
Sbjct: 370  DLRMSSVTIRQHFEHLGCKFSREKNVLYAKLPVPLKFPELRRRRRR 415


>ref|XP_002278228.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Vitis
            vinifera]
          Length = 421

 Score =  447 bits (1150), Expect = e-122
 Identities = 235/402 (58%), Positives = 300/402 (74%), Gaps = 6/402 (1%)
 Frame = -2

Query: 1429 ERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRP--RVRVYRNMNEKKNRTGRM 1256
            + V  K++ + E P KIPP+VGYFPS + P++  D E  P   V+V+RN    K R  R+
Sbjct: 25   KHVNVKMEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRN----KARANRL 80

Query: 1255 ELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVG 1076
            +LVVSP DS V +VGTSYSGEA + Q C YA+GVLDK+TQTLKIVPIA+NKIFRLEPRVG
Sbjct: 81   QLVVSPNDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVG 140

Query: 1075 GSDVADKEAG---KEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDL 905
            GSD +  E     K E +AE +A     L   YGTKKS+ Q++K+ ALN+++DP SQKDL
Sbjct: 141  GSDASVDEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDL 200

Query: 904  ALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLL 725
              K+K V INKEALEST++    N+PP D  ATTP +AY LDKII KGEWD+L DI +LL
Sbjct: 201  DRKLKEVVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLL 260

Query: 724  SVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAK 545
              G EV  +AY SFVC+RI K++E +D+ EK TLA IFSYI HL+K+KD++SMD  +SAK
Sbjct: 261  QAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAK 319

Query: 544  NHRIPNILYQKFMTMF-FDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRM 368
            +H+IP IL QKF +MF  D++S+RL+++K  LLIS+VLVL L+AD+FRT+P+DIA+DLRM
Sbjct: 320  HHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRM 379

Query: 367  SEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            S VKLR HFE LGCKL  +  +  ATLPVPL FP+ +Q+RRR
Sbjct: 380  SAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQKRRR 421


>emb|CBI35920.3| unnamed protein product [Vitis vinifera]
          Length = 391

 Score =  443 bits (1140), Expect = e-121
 Identities = 233/396 (58%), Positives = 297/396 (75%), Gaps = 6/396 (1%)
 Frame = -2

Query: 1411 VQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRP--RVRVYRNMNEKKNRTGRMELVVSP 1238
            ++ + E P KIPP+VGYFPS + P++  D E  P   V+V+RN    K R  R++LVVSP
Sbjct: 1    MEVVHEHPEKIPPLVGYFPSGFDPHKPQDHESDPPPAVKVFRN----KARANRLQLVVSP 56

Query: 1237 RDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGGSDVAD 1058
             DS V +VGTSYSGEA + Q C YA+GVLDK+TQTLKIVPIA+NKIFRLEPRVGGSD + 
Sbjct: 57   NDSKVNFVGTSYSGEAASAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVGGSDASV 116

Query: 1057 KEAG---KEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLALKIKS 887
             E     K E +AE +A     L   YGTKKS+ Q++K+ ALN+++DP SQKDL  K+K 
Sbjct: 117  DEPSSLLKGEQTAEEKAGRMRDLTNLYGTKKSITQAKKLQALNQKDDPRSQKDLDRKLKE 176

Query: 886  VKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLSVGSEV 707
            V INKEALEST++    N+PP D  ATTP +AY LDKII KGEWD+L DI +LL  G EV
Sbjct: 177  VVINKEALESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEV 236

Query: 706  TDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKNHRIPN 527
              +AY SFVC+RI K++E +D+ EK TLA IFSYI HL+K+KD++SMD  +SAK+H+IP 
Sbjct: 237  ESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPG 295

Query: 526  ILYQKFMTMF-FDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSEVKLR 350
            IL QKF +MF  D++S+RL+++K  LLIS+VLVL L+AD+FRT+P+DIA+DLRMS VKLR
Sbjct: 296  ILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLR 355

Query: 349  DHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
             HFE LGCKL  +  +  ATLPVPL FP+ +Q+RRR
Sbjct: 356  AHFEHLGCKLVSQNKVTMATLPVPLTFPRLRQKRRR 391


>ref|XP_007039490.1| DNA-directed RNA polymerase I subunit rpa49, putative [Theobroma
            cacao] gi|508776735|gb|EOY23991.1| DNA-directed RNA
            polymerase I subunit rpa49, putative [Theobroma cacao]
          Length = 457

 Score =  443 bits (1140), Expect = e-121
 Identities = 227/417 (54%), Positives = 302/417 (72%), Gaps = 21/417 (5%)
 Frame = -2

Query: 1429 ERVKAKVQFIPEQPNKIPPIVGYFPSIYKP-----------NEDPDEEK-------RPRV 1304
            E  + K+Q   +QPNKIPP+V YFPS Y P            E+ +EE+       +PRV
Sbjct: 41   ENFQVKIQLFQDQPNKIPPLVAYFPSGYNPCKTDPQTRQGEEEEEEEEEGPDNKSNQPRV 100

Query: 1303 RVYRNMNEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKI 1124
            +VYRNM ++K  T R+++VVSP  S+V++VG++YSGEA A Q C Y++GVLD++T+TLKI
Sbjct: 101  KVYRNMAQRK--TNRLQVVVSPSGSNVDFVGSNYSGEAAAAQVCRYSLGVLDRETRTLKI 158

Query: 1123 VPIAANKIFRLEPRVGGSDVADKEAG---KEEVSAEVQANMRAMLDTRYGTKKSLRQSRK 953
            +PIA+NKIFRLEPRV  S+ A+K+     K E++ E + +    L   YGTKK  ++ + 
Sbjct: 159  IPIASNKIFRLEPRVRSSETANKDVSSSVKSELTTEDKEDKMGELTALYGTKKDRKKRKD 218

Query: 952  MNALNKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKI 773
            +N L KE DPESQK L  KI+ V  NKEAL +T++ +  N+PP D +ATTP +AYPLDKI
Sbjct: 219  LNNLKKEVDPESQKSLDEKIEQVAFNKEALGNTSALVARNIPPHDSSATTPVEAYPLDKI 278

Query: 772  ILKGEWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHL 593
            ILKG+W+FL DIY LL VG+EV  NAYP+FVC+RI+K++  QD+ EK+ L+ +FS+ITHL
Sbjct: 279  ILKGDWEFLGDIYGLLEVGAEVASNAYPTFVCNRINKLEGIQDETEKRKLSCVFSFITHL 338

Query: 592  VKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHAD 413
            VKF DQ SMD  ASAK H+IP+I+ Q+F TMF D   ++ S D+I+LLIS+VLVL LHAD
Sbjct: 339  VKFNDQFSMDRVASAKGHKIPSIIRQRFFTMFTDPGLRKPSRDQINLLISYVLVLTLHAD 398

Query: 412  DFRTNPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
             FRT+P+DIAKDLRMS + LR HFE LGCKL RE N ++ TLPVPL+FP    +R+R
Sbjct: 399  GFRTDPSDIAKDLRMSSIGLRPHFENLGCKLVRENNSIFTTLPVPLKFPSETLKRQR 455


>ref|XP_006369274.1| hypothetical protein POPTR_0001s20580g [Populus trichocarpa]
            gi|550347732|gb|ERP65843.1| hypothetical protein
            POPTR_0001s20580g [Populus trichocarpa]
          Length = 472

 Score =  433 bits (1114), Expect = e-118
 Identities = 228/422 (54%), Positives = 291/422 (68%), Gaps = 25/422 (5%)
 Frame = -2

Query: 1435 EPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKR----------PRVRVYRNM 1286
            E  R+  K++ +  Q +K PP+VGYFPS Y P++  D              P V++YRN 
Sbjct: 50   EQPRLDVKLELVNNQVDKTPPVVGYFPSGYNPHKTNDINDAQEPILPLAAPPSVKLYRNA 109

Query: 1285 ------------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKK 1142
                        NEK   + R+ELVVSP  S+VE+VG SY GEAMA Q C YA+GVLDK 
Sbjct: 110  QRAKVEKSSGEKNEKGRTSERLELVVSPNGSNVEFVGNSYKGEAMAAQLCTYALGVLDKA 169

Query: 1141 TQTLKIVPIAANKIFRLEPRVGGSDVADKEAGK---EEVSAEVQANMRAMLDTRYGTKKS 971
            TQTLKI+PIA NKI RLEP++ GS  ADKE       E++AE +A     L+ +YG KKS
Sbjct: 170  TQTLKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKS 229

Query: 970  LRQSRKMNALNKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQA 791
            + Q +KM AL K +DP SQKDL  KI++  INK+ALEST+     N+PP + +A TP +A
Sbjct: 230  IIQDKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEA 289

Query: 790  YPLDKIILKGEWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIF 611
            YPLD IIL GEWDFL+DIY +L VG EV  NAYP+FVC+RI K++E QD+VEK+ L+ IF
Sbjct: 290  YPLDGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIF 349

Query: 610  SYITHLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLV 431
            SYITHL+KFKDQHSMDG ASA+NH+ P+I+ QKF  M F  E++RLS DKI LLIS+VLV
Sbjct: 350  SYITHLLKFKDQHSMDGAASARNHQFPSIIRQKFFEM-FKPETRRLSVDKIDLLISYVLV 408

Query: 430  LALHADDFRTNPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQR 251
            L L+ADDFRT P D++ DLRM+   ++ H+  LGCK+ REKN    TL VPL+FP+ K++
Sbjct: 409  LTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRK 468

Query: 250  RR 245
             R
Sbjct: 469  FR 470


>ref|XP_004141689.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Cucumis
            sativus] gi|700190278|gb|KGN45511.1| hypothetical protein
            Csa_7G450680 [Cucumis sativus]
          Length = 435

 Score =  432 bits (1112), Expect = e-118
 Identities = 224/398 (56%), Positives = 299/398 (75%), Gaps = 6/398 (1%)
 Frame = -2

Query: 1417 AKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEE--KRPRVRVYRNMNEKKNRTGRMELVV 1244
            AK+Q +  QP K PP+VGYFPS + P++D D+E  +  R RVY++    KNR  RM+LVV
Sbjct: 43   AKIQVLSNQPQKTPPVVGYFPSGFDPHKDADKEQSRSVRARVYKH----KNRPNRMQLVV 98

Query: 1243 SPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGGSD 1067
            SP  S+V++VGT+Y GEA A  Q C YA+GVLDK TQ+LKIVPIA+N IFRL+P+V GSD
Sbjct: 99   SPTGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMIFRLDPKVRGSD 158

Query: 1066 VADKEA---GKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLALK 896
            V + E+     EE+S + +AN    L   YGTKKS +Q++K++AL +E+DPE++ DL  +
Sbjct: 159  VTENESPSVANEELSGQDKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKSDLDGR 218

Query: 895  IKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLSVG 716
            +K+V +NKEALE T +E+  N+P  + +ATTP +AYPLDKIILKGEW FL+D+Y  L   
Sbjct: 219  MKNVVVNKEALEGTQAEVARNIPAYNASATTPQEAYPLDKIILKGEWSFLEDLYFRLQET 278

Query: 715  SEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKNHR 536
            +E++   YPSFV +RI+K+Q+ QD+ EK+ L  IFSYITHL+K+KDQHSM   +SAK H+
Sbjct: 279  AEISAT-YPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKGHK 337

Query: 535  IPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSEVK 356
            IP++L QKF +MF  AES+RLS DKI+LLISHVLVL+L AD+F ++P DIAKDLR S   
Sbjct: 338  IPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLSLFADEFSSDPADIAKDLRTSPYD 397

Query: 355  LRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            LR HF+ LGCK  R+ N+  ATLP+PLQFP+ +Q+RRR
Sbjct: 398  LRLHFDNLGCKFIRKNNLSLATLPIPLQFPELRQKRRR 435


>ref|XP_010273794.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 [Nelumbo
            nucifera]
          Length = 406

 Score =  431 bits (1108), Expect = e-118
 Identities = 223/400 (55%), Positives = 293/400 (73%), Gaps = 4/400 (1%)
 Frame = -2

Query: 1429 ERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRPRVRVYRNMNEKKNRTGRMEL 1250
            +R+  K++   + P+KIPP+VGYFPS + P    +EE   +VRVY N    KNR  R++L
Sbjct: 11   KRLDVKMEIFHQHPDKIPPLVGYFPSGFNPKRS-EEEDSTKVRVYSN----KNRPNRLQL 65

Query: 1249 VVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGGS 1070
            VVSP  S VE+VGTSYS EA A Q C YA+GVLDK+TQTLKIVPIA+NKIFRLEPRV GS
Sbjct: 66   VVSPNSSKVEFVGTSYSSEAAAAQVCTYALGVLDKETQTLKIVPIASNKIFRLEPRVRGS 125

Query: 1069 DVADKEAG----KEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLA 902
            +V+DKE      +E+++AE +A+    L   YGTKKS+ +++KM +L ++ DP SQ  + 
Sbjct: 126  EVSDKEPRGELQEEDLTAEQKADKIRDLTNLYGTKKSISRAKKMESLKQKEDPISQDAVD 185

Query: 901  LKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLS 722
             KI+   INK+ALE+       NVPP D  ATTP +AYPL+KII KGEWD+L D+  LL 
Sbjct: 186  KKIEGFVINKDALETAAVYTARNVPPHDPTATTPDKAYPLNKIIFKGEWDYLLDVLELLQ 245

Query: 721  VGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKN 542
             G+ ++ +AYPSFVC+RI+K++E QD++EK+ LA I SYITHL+KFKDQ S+DG +SAK 
Sbjct: 246  SGATISSDAYPSFVCNRIYKLEEIQDEMEKKRLACILSYITHLIKFKDQRSVDGASSAKY 305

Query: 541  HRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSE 362
            H+ P I+ QKF+T+F ++E+ RL+DDK  LLIS+VLVL L  D F T+ +DIAKDLRM+ 
Sbjct: 306  HKFPPIILQKFLTLFANSETYRLADDKQDLLISYVLVLTLFIDKFSTDMSDIAKDLRMTP 365

Query: 361  VKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            V LR H++ LGCKLSR   +L  TLPVPLQFPK + +RRR
Sbjct: 366  VSLRLHYQNLGCKLSRVDKLLMVTLPVPLQFPKPRTQRRR 405


>ref|XP_012068922.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X1
            [Jatropha curcas] gi|802577298|ref|XP_012068923.1|
            PREDICTED: DNA-directed RNA polymerase I subunit rpa49
            isoform X1 [Jatropha curcas]
          Length = 466

 Score =  430 bits (1105), Expect = e-117
 Identities = 229/413 (55%), Positives = 293/413 (70%), Gaps = 15/413 (3%)
 Frame = -2

Query: 1435 EPERVKAKVQFIPEQPNKIPPIVGYFPSIYKP--NEDPDEEKRPRVRVYRNM-------- 1286
            E + V  KV+ I ++ ++  PIVGYFPS YKP  NE+    ++  VR YR+         
Sbjct: 51   EQQSVDVKVEAIYDRADRSAPIVGYFPSGYKPQKNEENLSPQQSTVRFYRSTRAKMEKSS 110

Query: 1285 ---NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPI 1115
               +EK+  + R+ELVVSP  S+V++VG SY GEAMA Q C YA+GV DK TQTLKIVPI
Sbjct: 111  SEKDEKRRTSERLELVVSPHWSNVDFVGKSYKGEAMAAQLCTYALGVFDKMTQTLKIVPI 170

Query: 1114 AANKIFRLEPRVGGSDVADKEAG--KEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNAL 941
            A NKIFRLEP+V G D AD+E    + E S E + + R  L   YGTK+S+   +K+ AL
Sbjct: 171  AGNKIFRLEPKVRGLDTADEEPSVLENEPSGENRTDKRRELAVLYGTKRSIAGDKKLQAL 230

Query: 940  NKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKG 761
             + ++PESQ+DL  KI ++ +NKEAL ST++++  N+PP + +ATTP +AYPL+ IIL G
Sbjct: 231  RQGDNPESQEDLGNKIDNIVVNKEALASTSAQVARNIPPYNSSATTPQEAYPLNGIILAG 290

Query: 760  EWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFK 581
            EWDFL+D+Y +L  G+ V+ NAYP+FV +RIHK+QE QD+VEK+TL+ IFSYITHL+KFK
Sbjct: 291  EWDFLEDVYEILKTGAGVSSNAYPTFVRNRIHKLQEIQDEVEKKTLSRIFSYITHLIKFK 350

Query: 580  DQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRT 401
            D HS+DG ASAKNHR P+IL QKFM MF    S+ L  +KI LLIS+VLVL L+ DDFR+
Sbjct: 351  DMHSLDGAASAKNHRFPSILRQKFMNMFTPG-SRTLPIEKIDLLISYVLVLTLYVDDFRS 409

Query: 400  NPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            NPTDIAKDLRMS V LR HFE LGCK   E     ATLPVPL+F   K+ R R
Sbjct: 410  NPTDIAKDLRMSPVDLRVHFENLGCKGVNENKSFVATLPVPLKFQTVKRGRGR 462


>ref|XP_012068924.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49 isoform X2
            [Jatropha curcas] gi|643733893|gb|KDP40736.1|
            hypothetical protein JCGZ_24735 [Jatropha curcas]
          Length = 458

 Score =  430 bits (1105), Expect = e-117
 Identities = 229/413 (55%), Positives = 293/413 (70%), Gaps = 15/413 (3%)
 Frame = -2

Query: 1435 EPERVKAKVQFIPEQPNKIPPIVGYFPSIYKP--NEDPDEEKRPRVRVYRNM-------- 1286
            E + V  KV+ I ++ ++  PIVGYFPS YKP  NE+    ++  VR YR+         
Sbjct: 43   EQQSVDVKVEAIYDRADRSAPIVGYFPSGYKPQKNEENLSPQQSTVRFYRSTRAKMEKSS 102

Query: 1285 ---NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPI 1115
               +EK+  + R+ELVVSP  S+V++VG SY GEAMA Q C YA+GV DK TQTLKIVPI
Sbjct: 103  SEKDEKRRTSERLELVVSPHWSNVDFVGKSYKGEAMAAQLCTYALGVFDKMTQTLKIVPI 162

Query: 1114 AANKIFRLEPRVGGSDVADKEAG--KEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNAL 941
            A NKIFRLEP+V G D AD+E    + E S E + + R  L   YGTK+S+   +K+ AL
Sbjct: 163  AGNKIFRLEPKVRGLDTADEEPSVLENEPSGENRTDKRRELAVLYGTKRSIAGDKKLQAL 222

Query: 940  NKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKG 761
             + ++PESQ+DL  KI ++ +NKEAL ST++++  N+PP + +ATTP +AYPL+ IIL G
Sbjct: 223  RQGDNPESQEDLGNKIDNIVVNKEALASTSAQVARNIPPYNSSATTPQEAYPLNGIILAG 282

Query: 760  EWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFK 581
            EWDFL+D+Y +L  G+ V+ NAYP+FV +RIHK+QE QD+VEK+TL+ IFSYITHL+KFK
Sbjct: 283  EWDFLEDVYEILKTGAGVSSNAYPTFVRNRIHKLQEIQDEVEKKTLSRIFSYITHLIKFK 342

Query: 580  DQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRT 401
            D HS+DG ASAKNHR P+IL QKFM MF    S+ L  +KI LLIS+VLVL L+ DDFR+
Sbjct: 343  DMHSLDGAASAKNHRFPSILRQKFMNMFTPG-SRTLPIEKIDLLISYVLVLTLYVDDFRS 401

Query: 400  NPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            NPTDIAKDLRMS V LR HFE LGCK   E     ATLPVPL+F   K+ R R
Sbjct: 402  NPTDIAKDLRMSPVDLRVHFENLGCKGVNENKSFVATLPVPLKFQTVKRGRGR 454


>ref|XP_011014273.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Populus
            euphratica]
          Length = 472

 Score =  429 bits (1102), Expect = e-117
 Identities = 222/423 (52%), Positives = 292/423 (69%), Gaps = 25/423 (5%)
 Frame = -2

Query: 1435 EPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKR----------PRVRVYRNM 1286
            E  R+  K++ +    +K PP+VGYFPS Y P++  D              P V++YRN 
Sbjct: 50   EQPRLDVKLELVNNHVDKTPPVVGYFPSGYNPHKTNDINDAQEPNLPLAAPPSVKLYRNA 109

Query: 1285 ------------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKK 1142
                        NEK   + R+ELVVSP  S++E+VG SY GEAMA Q C YA+GVLDK 
Sbjct: 110  QRAKVEKSSGEKNEKGRTSERLELVVSPNGSNIEFVGNSYKGEAMAAQLCTYALGVLDKT 169

Query: 1141 TQTLKIVPIAANKIFRLEPRVGGSDVADKEAGK---EEVSAEVQANMRAMLDTRYGTKKS 971
            TQTLKI+PIA NKI RLEP++ GS  ADKE       E++AE +A     L+ +YG KKS
Sbjct: 170  TQTLKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKS 229

Query: 970  LRQSRKMNALNKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQA 791
            + Q +KM AL K +DP SQKDL  KI++  INK+ALEST+     N+PP + +A TP +A
Sbjct: 230  IIQDKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEA 289

Query: 790  YPLDKIILKGEWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIF 611
            YPLD IIL GEWDFL+DIY +L  G EV  NAYP+FVC+RI K++E QD++EK+ L+ IF
Sbjct: 290  YPLDGIILTGEWDFLEDIYKILQAGGEVASNAYPTFVCNRIQKLREIQDEMEKKRLSCIF 349

Query: 610  SYITHLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLV 431
            SYITHL+KFKDQHS+DG ASA+NH+ P+I+ QKF+ M F+ E++RLS +KI LLIS+VLV
Sbjct: 350  SYITHLIKFKDQHSLDGAASARNHQFPSIIRQKFLEM-FNPETRRLSVEKIDLLISYVLV 408

Query: 430  LALHADDFRTNPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQR 251
            L L+ADDFRT P D++ DLRM+   ++ H+  LGCK+ REKN    TL VPL+FP+ K++
Sbjct: 409  LTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRK 468

Query: 250  RRR 242
             R+
Sbjct: 469  FRK 471


>ref|XP_008462335.1| PREDICTED: uncharacterized protein LOC103500711 [Cucumis melo]
          Length = 436

 Score =  429 bits (1102), Expect = e-117
 Identities = 223/400 (55%), Positives = 299/400 (74%), Gaps = 6/400 (1%)
 Frame = -2

Query: 1423 VKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRP--RVRVYRNMNEKKNRTGRMEL 1250
            + AK+Q +  QP KIPP+VGYFPS + P++D D+E+    R RVY++    +N+  RM+L
Sbjct: 42   MNAKIQVLSNQPQKIPPVVGYFPSGFDPHKDADKEQSHSVRARVYKH----RNKPNRMQL 97

Query: 1249 VVSPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGG 1073
            VVSP  S+V++VGT+Y GEA A  Q C YA+GVLDK TQ+LKIVPIA+N I RL+P+V G
Sbjct: 98   VVSPTGSNVDFVGTNYLGEATAGKQHCTYALGVLDKATQSLKIVPIASNMILRLDPKVRG 157

Query: 1072 SDVADKEA---GKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLA 902
            SDV++ E+     EE+S + +AN    L   YGTKKS +Q++K++AL +E+DPE++ DL 
Sbjct: 158  SDVSENESPSVANEELSLQEKANRMRELTALYGTKKSKKQAQKLHALKQEDDPETKNDLD 217

Query: 901  LKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLS 722
             ++K+V +NKEALE T +EI  N+P  + +ATTP + YPLDKIILKGEW FL+D+Y  L 
Sbjct: 218  GRMKNVVVNKEALEGTQAEIARNIPAYNASATTPQEVYPLDKIILKGEWSFLEDLYFRLR 277

Query: 721  VGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKN 542
              +E+ +  YPSFV +RI+K+Q+ QD+ EK+ L  IFSYITHL+K+KDQHSM   +SAK 
Sbjct: 278  ETAEI-NATYPSFVRNRIYKLQDIQDEEEKKKLCCIFSYITHLIKYKDQHSMGDVSSAKG 336

Query: 541  HRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSE 362
            H+IP++L QKF +MF  AES+RLS DKI+LLISHVLVL L AD+F ++P DIAKDLR S 
Sbjct: 337  HKIPSMLRQKFSSMFPTAESRRLSADKINLLISHVLVLTLFADEFSSDPADIAKDLRTSP 396

Query: 361  VKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
              LR HF+ LGCK  R+ N+  ATLPVPLQFP+ +Q+RRR
Sbjct: 397  YDLRLHFDNLGCKFIRKNNLSLATLPVPLQFPELRQKRRR 436


>ref|XP_011007736.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Populus
            euphratica]
          Length = 472

 Score =  428 bits (1100), Expect = e-117
 Identities = 221/423 (52%), Positives = 292/423 (69%), Gaps = 25/423 (5%)
 Frame = -2

Query: 1435 EPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKR----------PRVRVYRNM 1286
            E  R+  K++ +    +K PP+VGYFPS Y P++  D              P V++YRN 
Sbjct: 50   EQPRLDVKLELVNNHVDKTPPVVGYFPSGYNPHKTNDINDAQEPNLPLAAPPSVKLYRNA 109

Query: 1285 ------------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKK 1142
                        NEK   + R+ELVVSP  S++E+VG SY GEAMA Q C YA+GVLDK 
Sbjct: 110  QRAKVEKSSGEKNEKGRTSERLELVVSPNGSNIEFVGNSYKGEAMAAQLCTYALGVLDKT 169

Query: 1141 TQTLKIVPIAANKIFRLEPRVGGSDVADKEAGK---EEVSAEVQANMRAMLDTRYGTKKS 971
            TQTLKI+PIA NKI RLEP++ GS  ADKE       E++AE +A     L+ +YG KKS
Sbjct: 170  TQTLKIMPIAGNKILRLEPKLRGSLAADKEHANFENGEITAEQRAARIRQLNVQYGPKKS 229

Query: 970  LRQSRKMNALNKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQA 791
            + Q +KM AL K +DP SQKDL  KI++  INK+ALEST+     N+PP + +A TP +A
Sbjct: 230  IIQDKKMQALRKGDDPLSQKDLGRKIENAPINKDALESTSGHSARNIPPYNSSAITPQEA 289

Query: 790  YPLDKIILKGEWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIF 611
            YPLD IIL GEWDFL+D+Y +L  G EV  NAYP+FVC+RI K++E QD++EK+ L+ IF
Sbjct: 290  YPLDGIILTGEWDFLEDLYKILQAGGEVASNAYPTFVCNRIQKLREIQDEMEKKRLSCIF 349

Query: 610  SYITHLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLV 431
            SYITHL+KFKDQHS+DG ASA+NH+ P+I+ QKF+ M F+ E++RLS +KI LLIS+VLV
Sbjct: 350  SYITHLIKFKDQHSLDGAASARNHQFPSIIRQKFLEM-FNPETRRLSVEKIDLLISYVLV 408

Query: 430  LALHADDFRTNPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQR 251
            L L+ADDFRT P D++ DLRM+   ++ H+  LGCK+ REKN    TL VPL+FP+ K++
Sbjct: 409  LTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPKRK 468

Query: 250  RRR 242
             R+
Sbjct: 469  FRK 471


>ref|XP_002521367.1| DNA-directed RNA polymerase I 49 kDa polypeptide, putative [Ricinus
            communis] gi|223539445|gb|EEF41035.1| DNA-directed RNA
            polymerase I 49 kDa polypeptide, putative [Ricinus
            communis]
          Length = 481

 Score =  427 bits (1097), Expect = e-116
 Identities = 227/428 (53%), Positives = 296/428 (69%), Gaps = 30/428 (7%)
 Frame = -2

Query: 1435 EPERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNE--------DPDEEK-------RPRVR 1301
            E   +  K++ I +Q +K PPIVGYFPS YKP++        D   E+       +P V+
Sbjct: 54   EQSPLNVKIEVIYDQTDKTPPIVGYFPSGYKPSKHNESNNLHDTSNEENATSSLSQPSVK 113

Query: 1300 VYRNM------------NEKKNRTGRMELVVSPRDSSVEYVGTSYSGEAMAPQFCHYAVG 1157
             YRN             NEK   + RMELVVSP  S+V++VG SY GEA A Q C YA+G
Sbjct: 114  FYRNAQRTKIEKSSNERNEKWRSSERMELVVSPNGSNVDFVGKSYKGEATAAQLCTYALG 173

Query: 1156 VLDKKTQTLKIVPIAANKIFRLEPRVGGSDVADKEAG---KEEVSAEVQANMRAMLDTRY 986
            VLDKKT+TLKI+PIA NKIFRLEP++ G D +DKE      E++S E  A  +  L   Y
Sbjct: 174  VLDKKTKTLKIMPIAGNKIFRLEPKIQGVDASDKEPSVLENEDLSKENMAVRKKTLTDTY 233

Query: 985  GTKKSLRQSRKMNALNKENDPESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNAT 806
            GTKKS+ Q ++M  + + ++PES+KDL  KI +V +NK ALE T++ +  N+PP + +AT
Sbjct: 234  GTKKSITQGKRMEIMMQGDNPESRKDLDQKIDNVVVNKAALEDTSAHVARNIPPHNTSAT 293

Query: 805  TPHQAYPLDKIILKGEWDFLQDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQT 626
            TP +AYPL +IIL GEWD+L+D+Y +L  G     NAYP FV +RIHK++E QD+VE++T
Sbjct: 294  TPQEAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDEVERKT 353

Query: 625  LASIFSYITHLVKFKDQHSMDGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLI 446
             + IFSYITHL+KFKD HSMDG +SAKNH+ P+IL QKFM M F  ES++L  +KI LLI
Sbjct: 354  YSRIFSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGM-FTPESRKLPVEKIDLLI 412

Query: 445  SHVLVLALHADDFRTNPTDIAKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFP 266
            S+VLVL+L+ADDFRT+PTDIAKDLR+S V +R HFE LGCK+  E  +  ATLPVPL+FP
Sbjct: 413  SYVLVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPVPLKFP 472

Query: 265  KAKQRRRR 242
              +QRR R
Sbjct: 473  VQRQRRAR 480


>ref|XP_008228244.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA49 [Prunus mume]
          Length = 427

 Score =  424 bits (1091), Expect = e-116
 Identities = 216/397 (54%), Positives = 299/397 (75%), Gaps = 3/397 (0%)
 Frame = -2

Query: 1423 VKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRPRVRVYRNMNEKKNRTGRMELVV 1244
            V+A +Q +P+ P K PP+VGYFP  + P + P       V ++R+   KK R  R+++VV
Sbjct: 34   VQATIQVVPDIPEKTPPLVGYFPCSFDPTKSPYSNSTD-VGLFRD--SKKPR--RLQIVV 88

Query: 1243 SPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGGSDV 1064
            +P  ++V++VGT+Y+GEA   Q C++A+GVLDK TQTLKI+P+A+NKIFRL+P V G + 
Sbjct: 89   TPNGTNVDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNY 148

Query: 1063 ADKE---AGKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLALKI 893
            + KE   + KE+++ E +A  +  L +RYGTKK++R+S+K+ +L +E+ PESQKDL  KI
Sbjct: 149  SAKEPESSVKEQLTGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKI 208

Query: 892  KSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLSVGS 713
            K +  NKEALEST S+I  ++PP + +ATTP +A+PLDKIIL GEWD L DIY     G+
Sbjct: 209  KLIVPNKEALESTESQISRHIPPFNESATTPQEAFPLDKIILTGEWDLLGDIYEHFQGGA 268

Query: 712  EVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKNHRI 533
            EV+ +A+P FVC RIHK+Q+ + D EK  L+ IFSYITHL+KFKDQHSMDG +S++ HRI
Sbjct: 269  EVSWDAFPRFVCHRIHKLQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRI 328

Query: 532  PNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSEVKL 353
            PN+L+ KF TM F  ESK LS++K +LLIS+VLVL L  D+F T+ TDIAKDLRMS + L
Sbjct: 329  PNLLFHKFSTM-FPMESKSLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIAL 387

Query: 352  RDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            R H+E LGCKL R++N+++ATLPVPLQFP+ +QRR++
Sbjct: 388  RKHYENLGCKLVRKRNVMFATLPVPLQFPQLRQRRQK 424


>ref|XP_007215426.1| hypothetical protein PRUPE_ppa006096mg [Prunus persica]
            gi|462411576|gb|EMJ16625.1| hypothetical protein
            PRUPE_ppa006096mg [Prunus persica]
          Length = 427

 Score =  423 bits (1087), Expect = e-115
 Identities = 216/397 (54%), Positives = 298/397 (75%), Gaps = 3/397 (0%)
 Frame = -2

Query: 1423 VKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRPRVRVYRNMNEKKNRTGRMELVV 1244
            V+A +Q +P+ P K PP+VGYFP  + P + P       V ++R+   KK R  R+++VV
Sbjct: 34   VQATIQVVPDIPEKTPPLVGYFPCSFDPTKSPYSNSTD-VGLFRD--SKKPR--RLQIVV 88

Query: 1243 SPRDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGGSDV 1064
            +P  ++V++VGT+Y+GEA   Q C++A+GVLDK TQTLKI+P+A+NKIFRL+P V G + 
Sbjct: 89   TPNGTNVDFVGTNYTGEATTGQSCNFALGVLDKATQTLKILPVASNKIFRLQPMVRGYNY 148

Query: 1063 ADKE---AGKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLALKI 893
            + KE   + KE+++ E +A  +  L +RYGTKK++R+S+K+ +L +E+ PESQKDL  KI
Sbjct: 149  SAKEPESSVKEQLTGEEKAEKQMELQSRYGTKKAIRESKKLRSLKQEDGPESQKDLDAKI 208

Query: 892  KSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLSVGS 713
            K +  NKEALEST S+I  ++PP + +ATTP +AY LDKIIL GEWD L DIY     G+
Sbjct: 209  KLIVPNKEALESTESQISRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGA 268

Query: 712  EVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKNHRI 533
            EV+ +A+P FVC RIHK+Q+ + D EK  L+ IFSYITHL+KFKDQHSMDG +S++ HRI
Sbjct: 269  EVSWDAFPRFVCHRIHKLQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRI 328

Query: 532  PNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSEVKL 353
            PN+L+ KF TM F  ESK LS++K +LLIS+VLVL L  D+F T+ TDIAKDLRMS + L
Sbjct: 329  PNLLFHKFSTM-FPTESKGLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIAL 387

Query: 352  RDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            R H+E LGCKL R++N+++ATLPVPLQFP+ +QRR++
Sbjct: 388  RKHYENLGCKLVRKRNVMFATLPVPLQFPQLRQRRQK 424


>ref|XP_010087702.1| DNA-directed RNA polymerase I subunit rpa49 [Morus notabilis]
            gi|587839011|gb|EXB29690.1| DNA-directed RNA polymerase I
            subunit rpa49 [Morus notabilis]
          Length = 438

 Score =  418 bits (1074), Expect = e-114
 Identities = 216/400 (54%), Positives = 294/400 (73%), Gaps = 5/400 (1%)
 Frame = -2

Query: 1426 RVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRPRV-RVYRNMNEKKNRTGRMEL 1250
            +V+A +Q +  QP + PP+VGYFPS + P +  DE     + RV+RN N+ K    R++L
Sbjct: 42   KVEATIQVVQNQPERAPPLVGYFPSGFDPKDGDDESSATAMARVFRNRNKPK----RLQL 97

Query: 1249 VVSPRDSSVEYVGTSYSGEAMA-PQFCHYAVGVLDKKTQTLKIVPIAANKIFRLEPRVGG 1073
            VVSP  ++V++VGT+YSGEA A  Q C+YA+GVLDK+TQTLKIVPIA+NKIFRLEP+V G
Sbjct: 98   VVSPNGANVDFVGTNYSGEAEAGQQHCNYALGVLDKETQTLKIVPIASNKIFRLEPKVRG 157

Query: 1072 SDVADKEAG---KEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKENDPESQKDLA 902
              + +K++G   + E SA  ++     L  RYGT KS+R+++K +AL + +DPE+QKD+ 
Sbjct: 158  LRLPNKDSGSLAEGERSALSKSEKIKGLTDRYGTNKSIREAKKRDALYQNDDPETQKDMD 217

Query: 901  LKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFLQDIYNLLS 722
             KIK + I K+ALEST      N+PP +  AT+  +AYP++KIILKGEWDFL+DIY LL 
Sbjct: 218  EKIKQIVIKKDALESTQVHTDRNIPPYNAAATSSQEAYPIEKIILKGEWDFLEDIYRLLQ 277

Query: 721  VGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSMDGRASAKN 542
              +E+  + YPSF+ +RI  ++E++D+ EK+  A IFSYITHL+KFKD HSMDG +SAK 
Sbjct: 278  EEAELKSDDYPSFISNRIQNLRETEDEEEKKRRACIFSYITHLIKFKDLHSMDGVSSAKR 337

Query: 541  HRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDIAKDLRMSE 362
            H+ P+IL QKF  MF  +E K+L+  +  LLIS+VLVL L+AD F+TN TDIAKDLRM+ 
Sbjct: 338  HKFPSILRQKFSAMFLSSEVKKLASKENDLLISYVLVLTLYADRFQTNLTDIAKDLRMTS 397

Query: 361  VKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRRR 242
            V LR H+E+LGCKL R+ N+ +ATLPVPLQFP  +QRRR+
Sbjct: 398  VTLRVHYEQLGCKLVRQNNLWFATLPVPLQFPDLRQRRRK 437


>ref|XP_004305732.2| PREDICTED: DNA-directed RNA polymerase I subunit rpa49-like [Fragaria
            vesca subsp. vesca]
          Length = 436

 Score =  405 bits (1040), Expect = e-110
 Identities = 215/407 (52%), Positives = 294/407 (72%), Gaps = 6/407 (1%)
 Frame = -2

Query: 1447 EPEPE-PERVKAKVQFIPEQPNKIPPIVGYFPSIYKPNEDPDEEKRPRVRVYRNMNEKKN 1271
            E +PE P++V+A ++ IP  P +IPP+VGYFPS + P ++PD +   +V V+R+    K 
Sbjct: 35   EADPEKPQQVQATIRVIPGNPERIPPLVGYFPSGFDPTQNPDPDST-KVGVFRH----KE 89

Query: 1270 RTG-RMELVVSP-RDSSVEYVGTSYSGEAMAPQFCHYAVGVLDKKTQTLKIVPIAANKIF 1097
            R G R+++VV+P ++  V++VGTSY+GEA A + C Y +G+LDK TQTLKIVPIA+NKIF
Sbjct: 90   RGGTRLQVVVTPNKEPKVDFVGTSYAGEAQAGELCSYGLGILDKATQTLKIVPIASNKIF 149

Query: 1096 RLEPRVGGSDVADKE---AGKEEVSAEVQANMRAMLDTRYGTKKSLRQSRKMNALNKEND 926
            RLE ++ G D A KE   +G  E+S   +A  R  L   YGTKKS+RQ++KM  L +E+D
Sbjct: 150  RLEAKIQGLDSAGKEPAGSGIGELSTLEKAKRRNELHNLYGTKKSIRQNKKMQTLKQEDD 209

Query: 925  PESQKDLALKIKSVKINKEALESTTSEIVLNVPPCDVNATTPHQAYPLDKIILKGEWDFL 746
            P+SQ DL   IK   I++E  E++      N PP + +ATTPH+AYPLDKII   EW FL
Sbjct: 210  PDSQNDLDA-IKQGMIDREDTEASEGHKDRNTPPFNASATTPHEAYPLDKIITTEEWKFL 268

Query: 745  QDIYNLLSVGSEVTDNAYPSFVCSRIHKVQESQDDVEKQTLASIFSYITHLVKFKDQHSM 566
            QDIY L   G+E++  ++P+FVC+R+HK+Q  +D+ ++  L+ IFSYITHLVKFKD HSM
Sbjct: 269  QDIYKLSEGGAEISQVSFPAFVCNRVHKLQLIEDEDKRNKLSCIFSYITHLVKFKDLHSM 328

Query: 565  DGRASAKNHRIPNILYQKFMTMFFDAESKRLSDDKIHLLISHVLVLALHADDFRTNPTDI 386
            DG +SAK HR P+++  KF TM FDA SKRLS +K +LLIS+VLVL L AD+F+T+ TDI
Sbjct: 329  DGFSSAKGHRFPSMIKDKFSTM-FDAVSKRLSTEKNNLLISYVLVLTLFADEFQTSMTDI 387

Query: 385  AKDLRMSEVKLRDHFEKLGCKLSREKNMLYATLPVPLQFPKAKQRRR 245
            AKDLRMS   LR H+E LGCK+S++ ++   TLPVPLQFP  +++RR
Sbjct: 388  AKDLRMSNATLRTHYETLGCKVSKKNDVSTVTLPVPLQFPTVRRKRR 434