BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00020109
         (1340 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr...   800   0.0  
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su...   799   0.0  
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su...   799   0.0  
gb|KDO63581.1| hypothetical protein CISIN_1g0005253mg, partial [...   618   e-174
ref|XP_012087018.1| PREDICTED: DNA-directed RNA polymerase IV su...   612   e-172
gb|KDP25521.1| hypothetical protein JCGZ_20677 [Jatropha curcas]      612   e-172
ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV su...   610   e-172
ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-...   610   e-171
ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV su...   607   e-171
ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV su...   607   e-171
ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV su...   601   e-169
ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV su...   601   e-169
gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium r...   601   e-169
ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV su...   601   e-169
ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prun...   595   e-167
ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   594   e-167
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              589   e-165
ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV su...   587   e-165
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin...   587   e-164
ref|XP_011029161.1| PREDICTED: DNA-directed RNA polymerase IV su...   585   e-164

>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
            gi|557542783|gb|ESR53761.1| hypothetical protein
            CICLE_v10018489mg [Citrus clementina]
          Length = 1443

 Score =  800 bits (2066), Expect = 0.0
 Identities = 396/446 (88%), Positives = 417/446 (93%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLL MFKAGSKGNLLKLVQHSLCLGLQH
Sbjct: 691  RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLGMFKAGSKGNLLKLVQHSLCLGLQH 750

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SLAPLSFRFPH+LSC AWN LR+GDNTECAKSYIPSAVVENSFL+GLNPLECF+HSVTSR
Sbjct: 751  SLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVENSFLTGLNPLECFIHSVTSR 810

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGEIGG 801
            DSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGEIG 
Sbjct: 811  DSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEIGD 870

Query: 800  QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLYLSKKLG 621
            QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSL+LS KLG
Sbjct: 871  QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLG 930

Query: 620  KRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWICHFHVRKEILQR 441
            KRRHGFEYGALEVKNHLECL  SDIVSTSMIIYSPQTGS  +HFSPWICHFHVRKEI++R
Sbjct: 931  KRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGS-MKHFSPWICHFHVRKEIMKR 989

Query: 440  TGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDPFCVTVMIVENS 261
            TGLKEHSI +SL   CKAARTE K+SVP+MLISN+DCSSINMQKE ND FCVTVMIVEN 
Sbjct: 990  TGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENF 1049

Query: 260  KKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDSSGELYLRVSMS 81
            K++SI+LE+IQ WV+PFLL+TVVKGFREIKKVDILWKD QKA+ SH DS GELYLRVSMS
Sbjct: 1050 KRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMS 1109

Query: 80   GHCRRTSLWSALMNGCLQIMDMIDWS 3
            G C  TSLWSALMN C QIMDMIDW+
Sbjct: 1110 GQCHITSLWSALMNDCHQIMDMIDWT 1135


>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Citrus sinensis] gi|568847098|ref|XP_006477377.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X3 [Citrus sinensis]
            gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
            RNA polymerase IV subunit 1-like isoform X4 [Citrus
            sinensis]
          Length = 1443

 Score =  799 bits (2063), Expect = 0.0
 Identities = 396/446 (88%), Positives = 417/446 (93%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH
Sbjct: 691  RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 750

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SLAPLSFRFPH+LSC AWN LR+GDNTECAKSYIPSAVV NSFL+GLNPLECF+HSVTSR
Sbjct: 751  SLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVANSFLTGLNPLECFIHSVTSR 810

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGEIGG 801
            DSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGEIGG
Sbjct: 811  DSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEIGG 870

Query: 800  QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLYLSKKLG 621
            Q VGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSL+LS KLG
Sbjct: 871  QSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLG 930

Query: 620  KRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWICHFHVRKEILQR 441
            KRRHGFEYGALEVKNHLECL  SDIVSTSMIIYSPQTGS  +HFSPWICHFHVRKEI++R
Sbjct: 931  KRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGS-MKHFSPWICHFHVRKEIMKR 989

Query: 440  TGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDPFCVTVMIVENS 261
            TGLKEHSI +SL   CKAARTE K+SVP+MLISN+DCSSINMQKE ND FCVTVMIVEN 
Sbjct: 990  TGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENF 1049

Query: 260  KKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDSSGELYLRVSMS 81
            K++SI+LE+IQ WV+PFLL+TVVKGFREIKKVDILWKD QKA+ SH DS GELYLRVSMS
Sbjct: 1050 KRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMS 1109

Query: 80   GHCRRTSLWSALMNGCLQIMDMIDWS 3
            G C  TSLWSALMN C QIMDMIDW+
Sbjct: 1110 GQCHITSLWSALMNDCHQIMDMIDWT 1135


>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Citrus sinensis]
          Length = 1481

 Score =  799 bits (2063), Expect = 0.0
 Identities = 396/446 (88%), Positives = 417/446 (93%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH
Sbjct: 729  RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 788

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SLAPLSFRFPH+LSC AWN LR+GDNTECAKSYIPSAVV NSFL+GLNPLECF+HSVTSR
Sbjct: 789  SLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVANSFLTGLNPLECFIHSVTSR 848

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGEIGG 801
            DSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGEIGG
Sbjct: 849  DSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEIGG 908

Query: 800  QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLYLSKKLG 621
            Q VGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSL+LS KLG
Sbjct: 909  QSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLG 968

Query: 620  KRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWICHFHVRKEILQR 441
            KRRHGFEYGALEVKNHLECL  SDIVSTSMIIYSPQTGS  +HFSPWICHFHVRKEI++R
Sbjct: 969  KRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGS-MKHFSPWICHFHVRKEIMKR 1027

Query: 440  TGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDPFCVTVMIVENS 261
            TGLKEHSI +SL   CKAARTE K+SVP+MLISN+DCSSINMQKE ND FCVTVMIVEN 
Sbjct: 1028 TGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVENF 1087

Query: 260  KKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDSSGELYLRVSMS 81
            K++SI+LE+IQ WV+PFLL+TVVKGFREIKKVDILWKD QKA+ SH DS GELYLRVSMS
Sbjct: 1088 KRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVSMS 1147

Query: 80   GHCRRTSLWSALMNGCLQIMDMIDWS 3
            G C  TSLWSALMN C QIMDMIDW+
Sbjct: 1148 GQCHITSLWSALMNDCHQIMDMIDWT 1173


>gb|KDO63581.1| hypothetical protein CISIN_1g0005253mg, partial [Citrus sinensis]
          Length = 825

 Score =  618 bits (1593), Expect = e-174
 Identities = 307/334 (91%), Positives = 319/334 (95%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH
Sbjct: 493  RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 552

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SLAPLSFRFPH+LSC AWN LR+GDNTECAKSYIPSAVVENSFL+GLNPLECF+HSVTSR
Sbjct: 553  SLAPLSFRFPHELSCAAWNRLRAGDNTECAKSYIPSAVVENSFLTGLNPLECFIHSVTSR 612

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTGEIGG 801
            DSSFSDNADLPGTLTRRLMFFMRDL TAYDGTVRNAYGNQ+VQFSYNIEGTS PTGEIG 
Sbjct: 613  DSSFSDNADLPGTLTRRLMFFMRDLCTAYDGTVRNAYGNQIVQFSYNIEGTSTPTGEIGD 672

Query: 800  QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLYLSKKLG 621
            QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSL+LS KLG
Sbjct: 673  QPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSNKLG 732

Query: 620  KRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWICHFHVRKEILQR 441
            KRRHGFEYGALEVKNHLECL  SDIVSTSMIIYSPQTGS  +HFSPWICHFHVRKEI++R
Sbjct: 733  KRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGS-MKHFSPWICHFHVRKEIMKR 791

Query: 440  TGLKEHSIFESLNLHCKAARTESKMSVPNMLISN 339
            TGLKEHSI +SL   CKAARTE K+SVP+MLISN
Sbjct: 792  TGLKEHSIIDSLYRQCKAARTELKISVPDMLISN 825


>ref|XP_012087018.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Jatropha curcas]
          Length = 1453

 Score =  612 bits (1578), Expect = e-172
 Identities = 312/457 (68%), Positives = 365/457 (79%), Gaps = 11/457 (2%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVF DIQ LAYKY SKDN+L+ MFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 700  RSAALSQASVDAFKHVFRDIQILAYKYASKDNALMTMFKAGSKGNLLKLVQHSMCLGLQH 759

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SL PLSFR PH LSC AWN  +  + TECAK YIPSAVV++SFL+GLNPLECFVHSVTSR
Sbjct: 760  SLVPLSFRMPHQLSCDAWNKQKDDNATECAKCYIPSAVVKSSFLTGLNPLECFVHSVTSR 819

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFS-YNIEGTSAPTG--- 813
            DSSFSDNADLPGTLTRRLMFFMRD+H AYDGT+RNAYGNQLVQFS YN E TS PT    
Sbjct: 820  DSSFSDNADLPGTLTRRLMFFMRDIHAAYDGTIRNAYGNQLVQFSYYNREETSCPTNCSG 879

Query: 812  -------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQ 654
                    IGG+PVGSL+ACAISEAAYSALDQPISLLE SPLLNLKNVLECG KKSNA +
Sbjct: 880  QIIDTFDGIGGRPVGSLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLKKSNAHK 939

Query: 653  TMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWIC 474
            +++L+LS KLG+RRHGFEYGALEV+NHLE L FSDIVS S II+SPQ+ SK + FSPW+C
Sbjct: 940  SVTLFLSDKLGRRRHGFEYGALEVQNHLERLLFSDIVSISRIIHSPQSDSKTR-FSPWVC 998

Query: 473  HFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDP 294
            HFHV KEI+++  L  HSI ++L   CK     S+  +PN+ I+ +DCS  +  +E  D 
Sbjct: 999  HFHVDKEIMKKRSLSIHSIIDALYKQCK-----SQTILPNVQITCKDCSVADNHREIEDT 1053

Query: 293  FCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDS 114
             C+TV ++E +K SSI+L++I+  +IPFLL TV+KG  EI+KVDILW +  +   SH  S
Sbjct: 1054 LCITVTVIEKAKNSSIKLDTIRDLIIPFLLETVLKGLMEIEKVDILWNERPRIQKSHNRS 1113

Query: 113  SGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
             GELYLRVSMSG   +T LW+ L++ CL IMDMIDW+
Sbjct: 1114 YGELYLRVSMSGRSDKTRLWNLLVDHCLPIMDMIDWT 1150


>gb|KDP25521.1| hypothetical protein JCGZ_20677 [Jatropha curcas]
          Length = 942

 Score =  612 bits (1578), Expect = e-172
 Identities = 312/457 (68%), Positives = 365/457 (79%), Gaps = 11/457 (2%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVF DIQ LAYKY SKDN+L+ MFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 189  RSAALSQASVDAFKHVFRDIQILAYKYASKDNALMTMFKAGSKGNLLKLVQHSMCLGLQH 248

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SL PLSFR PH LSC AWN  +  + TECAK YIPSAVV++SFL+GLNPLECFVHSVTSR
Sbjct: 249  SLVPLSFRMPHQLSCDAWNKQKDDNATECAKCYIPSAVVKSSFLTGLNPLECFVHSVTSR 308

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFS-YNIEGTSAPTG--- 813
            DSSFSDNADLPGTLTRRLMFFMRD+H AYDGT+RNAYGNQLVQFS YN E TS PT    
Sbjct: 309  DSSFSDNADLPGTLTRRLMFFMRDIHAAYDGTIRNAYGNQLVQFSYYNREETSCPTNCSG 368

Query: 812  -------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQ 654
                    IGG+PVGSL+ACAISEAAYSALDQPISLLE SPLLNLKNVLECG KKSNA +
Sbjct: 369  QIIDTFDGIGGRPVGSLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLKKSNAHK 428

Query: 653  TMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWIC 474
            +++L+LS KLG+RRHGFEYGALEV+NHLE L FSDIVS S II+SPQ+ SK + FSPW+C
Sbjct: 429  SVTLFLSDKLGRRRHGFEYGALEVQNHLERLLFSDIVSISRIIHSPQSDSKTR-FSPWVC 487

Query: 473  HFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDP 294
            HFHV KEI+++  L  HSI ++L   CK     S+  +PN+ I+ +DCS  +  +E  D 
Sbjct: 488  HFHVDKEIMKKRSLSIHSIIDALYKQCK-----SQTILPNVQITCKDCSVADNHREIEDT 542

Query: 293  FCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDS 114
             C+TV ++E +K SSI+L++I+  +IPFLL TV+KG  EI+KVDILW +  +   SH  S
Sbjct: 543  LCITVTVIEKAKNSSIKLDTIRDLIIPFLLETVLKGLMEIEKVDILWNERPRIQKSHNRS 602

Query: 113  SGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
             GELYLRVSMSG   +T LW+ L++ CL IMDMIDW+
Sbjct: 603  YGELYLRVSMSGRSDKTRLWNLLVDHCLPIMDMIDWT 639


>ref|XP_010661369.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X2 [Vitis
            vinifera]
          Length = 1458

 Score =  610 bits (1574), Expect = e-172
 Identities = 315/458 (68%), Positives = 367/458 (80%), Gaps = 14/458 (3%)
 Frame = -1

Query: 1337 SAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHS 1158
            SAAL Q+SV AFK  F DIQNL Y+Y +KDNSLLAM KAGSKGNLLKLVQ  LCLGLQHS
Sbjct: 693  SAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHS 752

Query: 1157 LAPLSFRFPHDLSCTAWNT-----LRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHS 993
            L PLSF+ PH LSC AWN      L   D +E A+SYIP AVVENSFL GLNPLECFVHS
Sbjct: 753  LVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHS 812

Query: 992  VTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTG 813
            VTSRDSSFSDNADLPGTLTRRLMFFMRDL+ AYDGTVRNAYGNQLVQFSYNIE TS P+ 
Sbjct: 813  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 872

Query: 812  ---------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 660
                     ++GGQPVGS+SACAISEAAYSALDQPISLLE SPLLNLK VLECG +KS A
Sbjct: 873  GINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTA 932

Query: 659  DQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPW 480
            D+T+SL+LSKKL KR+HGFEYGALEVKNHLE L FSDIVST MI++SPQ GSK  HFSPW
Sbjct: 933  DRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSK-THFSPW 991

Query: 479  ICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESN 300
            +CHFHV +EI ++  LK HSI ++L + C +AR ESK+++P++ I+++DC  ++M+KE +
Sbjct: 992  VCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDC-FVDMEKEDS 1050

Query: 299  DPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHK 120
            D FC+TV IV NSKKS I+L++++  VIPFLL  VVKG  ++KKVDILW DN   ++  K
Sbjct: 1051 DCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDVLK 1108

Query: 119  DSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDW 6
             SSG LYLRV +SG C + + W  LM+ CLQIMDMIDW
Sbjct: 1109 SSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDW 1146


>ref|XP_007040111.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
            cacao] gi|508777356|gb|EOY24612.1| DNA-directed RNA
            polymerase II subunit RPB1-B, putative [Theobroma cacao]
          Length = 1484

 Score =  610 bits (1572), Expect = e-171
 Identities = 318/470 (67%), Positives = 369/470 (78%), Gaps = 24/470 (5%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVD+FK VF DIQNL YKY +KDNSLL MFKAGSKGNLLKLVQHSLCLGLQH
Sbjct: 706  RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLLTMFKAGSKGNLLKLVQHSLCLGLQH 765

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRS-------GDNTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFRFPH LSC AWN  +S        D  E AK+YIP AVVE+SF++GLNPLE F
Sbjct: 766  SLVPLSFRFPHQLSCAAWNNQKSHGLTQKVDDTAESAKNYIPYAVVESSFMTGLNPLESF 825

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE-GTS 825
            VHSVTSRDSSFSDNADLPGTL+RRLMFFMRDL+TAYDGTVRN+YG+ +VQF Y+I+   S
Sbjct: 826  VHSVTSRDSSFSDNADLPGTLSRRLMFFMRDLYTAYDGTVRNSYGDLVVQFCYDIDKDAS 885

Query: 824  APTG--------------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVL 687
            +PT                IGGQPVGSLSACAISEAAYSALDQP+SLLETSPLLNLK V+
Sbjct: 886  SPTSCAHGLISESSTIPEGIGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKRVV 945

Query: 686  ECGSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTG 507
            ECGSK+SNADQTM+L+LS KLG++RHG EY ALEVKNHLE LTFSDIV+T  II+SPQ  
Sbjct: 946  ECGSKRSNADQTMTLFLSNKLGRKRHGSEYAALEVKNHLERLTFSDIVTTVSIIFSPQM- 1004

Query: 506  SKQQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISN--RD 333
             ++ HF+PW+CHFHV K+ ++R  LK  SI +SL++HC  A+T  K+S+P+M I++  R 
Sbjct: 1005 YRENHFTPWVCHFHVCKDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRA 1064

Query: 332  CSSINMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILW 153
            CS I+M  E +D FC+TV IVE SK S +EL+ I+  VIP+LL  V+KGF EIKKVDILW
Sbjct: 1065 CSHIDMPNE-DDTFCITVTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILW 1123

Query: 152  KDNQKAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            KD  K +  HK S GELYLRV +SG    T LW  LMN CLQIMDMIDW+
Sbjct: 1124 KDRLKVSKPHKSSCGELYLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWT 1173


>ref|XP_010661376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X3 [Vitis
            vinifera]
          Length = 1354

 Score =  607 bits (1564), Expect = e-171
 Identities = 316/460 (68%), Positives = 367/460 (79%), Gaps = 16/460 (3%)
 Frame = -1

Query: 1337 SAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHS 1158
            SAAL Q+SV AFK  F DIQNL Y+Y +KDNSLLAM KAGSKGNLLKLVQ  LCLGLQHS
Sbjct: 587  SAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHS 646

Query: 1157 LAPLSFRFPHDLSCTAWNT-----LRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHS 993
            L PLSF+ PH LSC AWN      L   D +E A+SYIP AVVENSFL GLNPLECFVHS
Sbjct: 647  LVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHS 706

Query: 992  VTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTG 813
            VTSRDSSFSDNADLPGTLTRRLMFFMRDL+ AYDGTVRNAYGNQLVQFSYNIE TS P+ 
Sbjct: 707  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 766

Query: 812  ---------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 660
                     ++GGQPVGS+SACAISEAAYSALDQPISLLE SPLLNLK VLECG +KS A
Sbjct: 767  GINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTA 826

Query: 659  DQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPW 480
            D+T+SL+LSKKL KR+HGFEYGALEVKNHLE L FSDIVST MI++SPQ GSK  HFSPW
Sbjct: 827  DRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSK-THFSPW 885

Query: 479  ICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISN--RDCSSINMQKE 306
            +CHFHV +EI ++  LK HSI ++L + C +AR ESK+++P++ I++  RDC  ++M+KE
Sbjct: 886  VCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDC-FVDMEKE 944

Query: 305  SNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANS 126
             +D FC+TV IV NSKKS I+L++++  VIPFLL  VVKG  ++KKVDILW DN   ++ 
Sbjct: 945  DSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDV 1002

Query: 125  HKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDW 6
             K SSG LYLRV +SG C + + W  LM+ CLQIMDMIDW
Sbjct: 1003 LKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDW 1042


>ref|XP_010661365.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 isoform X1 [Vitis
            vinifera]
          Length = 1460

 Score =  607 bits (1564), Expect = e-171
 Identities = 316/460 (68%), Positives = 367/460 (79%), Gaps = 16/460 (3%)
 Frame = -1

Query: 1337 SAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHS 1158
            SAAL Q+SV AFK  F DIQNL Y+Y +KDNSLLAM KAGSKGNLLKLVQ  LCLGLQHS
Sbjct: 693  SAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHS 752

Query: 1157 LAPLSFRFPHDLSCTAWNT-----LRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHS 993
            L PLSF+ PH LSC AWN      L   D +E A+SYIP AVVENSFL GLNPLECFVHS
Sbjct: 753  LVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHS 812

Query: 992  VTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTG 813
            VTSRDSSFSDNADLPGTLTRRLMFFMRDL+ AYDGTVRNAYGNQLVQFSYNIE TS P+ 
Sbjct: 813  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 872

Query: 812  ---------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 660
                     ++GGQPVGS+SACAISEAAYSALDQPISLLE SPLLNLK VLECG +KS A
Sbjct: 873  GINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTA 932

Query: 659  DQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPW 480
            D+T+SL+LSKKL KR+HGFEYGALEVKNHLE L FSDIVST MI++SPQ GSK  HFSPW
Sbjct: 933  DRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSK-THFSPW 991

Query: 479  ICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISN--RDCSSINMQKE 306
            +CHFHV +EI ++  LK HSI ++L + C +AR ESK+++P++ I++  RDC  ++M+KE
Sbjct: 992  VCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSNGRDC-FVDMEKE 1050

Query: 305  SNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANS 126
             +D FC+TV IV NSKKS I+L++++  VIPFLL  VVKG  ++KKVDILW DN   ++ 
Sbjct: 1051 DSDCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDV 1108

Query: 125  HKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDW 6
             K SSG LYLRV +SG C + + W  LM+ CLQIMDMIDW
Sbjct: 1109 LKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDW 1148


>ref|XP_012476049.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X3
            [Gossypium raimondii]
          Length = 1300

 Score =  601 bits (1549), Expect = e-169
 Identities = 316/469 (67%), Positives = 365/469 (77%), Gaps = 23/469 (4%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVD+FK VF DIQNL YKY +KDNSL  MFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 706  RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 765

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRS-------GDNTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFRFPH LSC AWN  +S        D  E AK YIP AVVE+SF+ GLNPLECF
Sbjct: 766  SLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPLECF 825

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE---- 834
            VHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL  AYDGTVRNAYG+Q+VQF YNI+    
Sbjct: 826  VHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDKGTF 885

Query: 833  ------------GTSAPTGEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNV 690
                        G+S P G IGGQPVGSLSACAISEAAYSALDQPISLLE+SPLLNLK V
Sbjct: 886  SPTSCPDKLVSQGSSLPDG-IGGQPVGSLSACAISEAAYSALDQPISLLESSPLLNLKRV 944

Query: 689  LECGSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQT 510
            LECGSK+SNADQTMSL+LS KL +RRHG EYGALEVKNHLE L F DIVST  II+SPQ 
Sbjct: 945  LECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHLERLIFKDIVSTVSIIFSPQM 1004

Query: 509  GSKQQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDC 330
             S +  FSPW+CHFHV K+I+ R  L  HSI ++L++HC  A+   K+++P+M ++++ C
Sbjct: 1005 -SSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTNAKRLWKINLPDMQVTSKAC 1063

Query: 329  SSINMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWK 150
            S I+M+ E +D FC+TV IVE  K S IEL+ IQ  VIP LL  VVKGF EIKKV+ILW 
Sbjct: 1064 SVIDMENE-DDTFCITVTIVE-CKTSRIELDVIQDMVIPSLLEAVVKGFPEIKKVEILWN 1121

Query: 149  DNQKAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            ++ +  NSHK + GELYLRVS+SG    T LWS LMN CLQ+MD+IDW+
Sbjct: 1122 EDFRVPNSHKPAPGELYLRVSVSGDFGITKLWSVLMNDCLQLMDIIDWT 1170


>ref|XP_012476048.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
            [Gossypium raimondii]
          Length = 1340

 Score =  601 bits (1549), Expect = e-169
 Identities = 316/469 (67%), Positives = 365/469 (77%), Gaps = 23/469 (4%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVD+FK VF DIQNL YKY +KDNSL  MFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 565  RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 624

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRS-------GDNTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFRFPH LSC AWN  +S        D  E AK YIP AVVE+SF+ GLNPLECF
Sbjct: 625  SLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPLECF 684

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE---- 834
            VHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL  AYDGTVRNAYG+Q+VQF YNI+    
Sbjct: 685  VHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDKGTF 744

Query: 833  ------------GTSAPTGEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNV 690
                        G+S P G IGGQPVGSLSACAISEAAYSALDQPISLLE+SPLLNLK V
Sbjct: 745  SPTSCPDKLVSQGSSLPDG-IGGQPVGSLSACAISEAAYSALDQPISLLESSPLLNLKRV 803

Query: 689  LECGSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQT 510
            LECGSK+SNADQTMSL+LS KL +RRHG EYGALEVKNHLE L F DIVST  II+SPQ 
Sbjct: 804  LECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHLERLIFKDIVSTVSIIFSPQM 863

Query: 509  GSKQQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDC 330
             S +  FSPW+CHFHV K+I+ R  L  HSI ++L++HC  A+   K+++P+M ++++ C
Sbjct: 864  -SSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTNAKRLWKINLPDMQVTSKAC 922

Query: 329  SSINMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWK 150
            S I+M+ E +D FC+TV IVE  K S IEL+ IQ  VIP LL  VVKGF EIKKV+ILW 
Sbjct: 923  SVIDMENE-DDTFCITVTIVE-CKTSRIELDVIQDMVIPSLLEAVVKGFPEIKKVEILWN 980

Query: 149  DNQKAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            ++ +  NSHK + GELYLRVS+SG    T LWS LMN CLQ+MD+IDW+
Sbjct: 981  EDFRVPNSHKPAPGELYLRVSVSGDFGITKLWSVLMNDCLQLMDIIDWT 1029


>gb|KJB25756.1| hypothetical protein B456_004G207300 [Gossypium raimondii]
          Length = 1478

 Score =  601 bits (1549), Expect = e-169
 Identities = 316/469 (67%), Positives = 365/469 (77%), Gaps = 23/469 (4%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVD+FK VF DIQNL YKY +KDNSL  MFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 703  RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 762

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRS-------GDNTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFRFPH LSC AWN  +S        D  E AK YIP AVVE+SF+ GLNPLECF
Sbjct: 763  SLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPLECF 822

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE---- 834
            VHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL  AYDGTVRNAYG+Q+VQF YNI+    
Sbjct: 823  VHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDKGTF 882

Query: 833  ------------GTSAPTGEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNV 690
                        G+S P G IGGQPVGSLSACAISEAAYSALDQPISLLE+SPLLNLK V
Sbjct: 883  SPTSCPDKLVSQGSSLPDG-IGGQPVGSLSACAISEAAYSALDQPISLLESSPLLNLKRV 941

Query: 689  LECGSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQT 510
            LECGSK+SNADQTMSL+LS KL +RRHG EYGALEVKNHLE L F DIVST  II+SPQ 
Sbjct: 942  LECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHLERLIFKDIVSTVSIIFSPQM 1001

Query: 509  GSKQQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDC 330
             S +  FSPW+CHFHV K+I+ R  L  HSI ++L++HC  A+   K+++P+M ++++ C
Sbjct: 1002 -SSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTNAKRLWKINLPDMQVTSKAC 1060

Query: 329  SSINMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWK 150
            S I+M+ E +D FC+TV IVE  K S IEL+ IQ  VIP LL  VVKGF EIKKV+ILW 
Sbjct: 1061 SVIDMENE-DDTFCITVTIVE-CKTSRIELDVIQDMVIPSLLEAVVKGFPEIKKVEILWN 1118

Query: 149  DNQKAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            ++ +  NSHK + GELYLRVS+SG    T LWS LMN CLQ+MD+IDW+
Sbjct: 1119 EDFRVPNSHKPAPGELYLRVSVSGDFGITKLWSVLMNDCLQLMDIIDWT 1167


>ref|XP_012476045.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
            [Gossypium raimondii] gi|823152441|ref|XP_012476046.1|
            PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
            isoform X1 [Gossypium raimondii]
            gi|763758424|gb|KJB25755.1| hypothetical protein
            B456_004G207300 [Gossypium raimondii]
            gi|763758426|gb|KJB25757.1| hypothetical protein
            B456_004G207300 [Gossypium raimondii]
          Length = 1481

 Score =  601 bits (1549), Expect = e-169
 Identities = 316/469 (67%), Positives = 365/469 (77%), Gaps = 23/469 (4%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVD+FK VF DIQNL YKY +KDNSL  MFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 706  RSAALSQASVDSFKQVFRDIQNLLYKYANKDNSLFTMFKAGSKGNLLKLVQHSMCLGLQH 765

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRS-------GDNTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFRFPH LSC AWN  +S        D  E AK YIP AVVE+SF+ GLNPLECF
Sbjct: 766  SLVPLSFRFPHQLSCAAWNNQKSHILTQKVDDTDESAKKYIPYAVVESSFVKGLNPLECF 825

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE---- 834
            VHSVT+RD+SFSDNADLPGTL+RRLMFFMRDL  AYDGTVRNAYG+Q+VQF YNI+    
Sbjct: 826  VHSVTTRDTSFSDNADLPGTLSRRLMFFMRDLCAAYDGTVRNAYGDQVVQFCYNIDKGTF 885

Query: 833  ------------GTSAPTGEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNV 690
                        G+S P G IGGQPVGSLSACAISEAAYSALDQPISLLE+SPLLNLK V
Sbjct: 886  SPTSCPDKLVSQGSSLPDG-IGGQPVGSLSACAISEAAYSALDQPISLLESSPLLNLKRV 944

Query: 689  LECGSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQT 510
            LECGSK+SNADQTMSL+LS KL +RRHG EYGALEVKNHLE L F DIVST  II+SPQ 
Sbjct: 945  LECGSKRSNADQTMSLFLSGKLVRRRHGQEYGALEVKNHLERLIFKDIVSTVSIIFSPQM 1004

Query: 509  GSKQQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDC 330
             S +  FSPW+CHFHV K+I+ R  L  HSI ++L++HC  A+   K+++P+M ++++ C
Sbjct: 1005 -SSENRFSPWVCHFHVFKDIVTRRRLTVHSIIDALHMHCTNAKRLWKINLPDMQVTSKAC 1063

Query: 329  SSINMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWK 150
            S I+M+ E +D FC+TV IVE  K S IEL+ IQ  VIP LL  VVKGF EIKKV+ILW 
Sbjct: 1064 SVIDMENE-DDTFCITVTIVE-CKTSRIELDVIQDMVIPSLLEAVVKGFPEIKKVEILWN 1121

Query: 149  DNQKAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            ++ +  NSHK + GELYLRVS+SG    T LWS LMN CLQ+MD+IDW+
Sbjct: 1122 EDFRVPNSHKPAPGELYLRVSVSGDFGITKLWSVLMNDCLQLMDIIDWT 1170


>ref|XP_007210915.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
            gi|462406650|gb|EMJ12114.1| hypothetical protein
            PRUPE_ppa000278mg [Prunus persica]
          Length = 1356

 Score =  595 bits (1535), Expect = e-167
 Identities = 309/466 (66%), Positives = 364/466 (78%), Gaps = 20/466 (4%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            +SAALSQ   DAFKH+F DIQ+LA+KY  KDNSLL M KAGSKGNL KLVQHS+CLGLQH
Sbjct: 592  KSAALSQVVHDAFKHIFRDIQSLAHKYAGKDNSLLTMLKAGSKGNLQKLVQHSMCLGLQH 651

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGD-------NTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFR P+ LSC AWN  ++           EC +SYIPSAVV++SFL+GLNPLECF
Sbjct: 652  SLIPLSFRIPNQLSCAAWNNQKACSLIQKVEGTYECVESYIPSAVVKSSFLTGLNPLECF 711

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE---- 834
            VHSVTSRDSSFS NADLPGTLTR+LMF MRDL+TAYDGTVRNAYGNQLVQFSY+I+    
Sbjct: 712  VHSVTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDIDMDKS 771

Query: 833  ---------GTSAPTGEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLEC 681
                      T+A  G IGGQPVGSLSACA+SEAAYSALDQP+SLLETSPLLNLKN+LEC
Sbjct: 772  DSTSTSHAKSTTACDG-IGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILEC 830

Query: 680  GSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSK 501
            GSKKS+A QT+SL+LSKKLG+RRHGFEYGALEVKNHL  LTFSDIVST MII+S Q+ S 
Sbjct: 831  GSKKSSAKQTLSLFLSKKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQSNS- 889

Query: 500  QQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSI 321
            Q+ FSPW+ HFH+ KEI+++  LK HS+ +SL   C +AR E K+ + ++LI+++ CS+ 
Sbjct: 890  QKRFSPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAA 949

Query: 320  NMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQ 141
                  +D FC+TV + ENSK SS +L+  +  VIPFLL TVVKGF E+KKVDILW D+ 
Sbjct: 950  QTCNGDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHP 1009

Query: 140  KAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            + +     SSGELYLRVSMSG   R  LWS LM+ CLQIMD+IDWS
Sbjct: 1010 RESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMDLIDWS 1055


>ref|XP_008238796.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase IV
            subunit 1 [Prunus mume]
          Length = 1452

 Score =  594 bits (1532), Expect = e-167
 Identities = 309/466 (66%), Positives = 363/466 (77%), Gaps = 20/466 (4%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            +SAALSQ   DAFKH+F DIQ+LA+KY  KDNSLL M KAGSKGNL KLVQHS+CLGLQH
Sbjct: 685  KSAALSQVVHDAFKHIFRDIQSLAHKYAGKDNSLLTMLKAGSKGNLQKLVQHSMCLGLQH 744

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGD-------NTECAKSYIPSAVVENSFLSGLNPLECF 1002
            SL PLSFR P+ LSC AWN  ++           EC +SYIPSAVVE+SFL+GLNPLECF
Sbjct: 745  SLIPLSFRIPNQLSCAAWNNQKACSLIQKVEGTYECVESYIPSAVVESSFLTGLNPLECF 804

Query: 1001 VHSVTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIE---- 834
            VHSVTSRDSSFS NADLPGTLTR+LMF MRDL+TAYDGTVRNAYGNQLVQFSY+I+    
Sbjct: 805  VHSVTSRDSSFSGNADLPGTLTRKLMFLMRDLYTAYDGTVRNAYGNQLVQFSYDIDMDKS 864

Query: 833  ---------GTSAPTGEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLEC 681
                      T+A  G IGGQPVGSLSACA+SEAAYSALDQP+SLLETSPLLNLKN+LEC
Sbjct: 865  DSTSTSYAKSTTACDG-IGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILEC 923

Query: 680  GSKKSNADQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSK 501
            GSKKS+A QTMSL+LS+KLG+RRHGFEYGALEVKNHL  LTFSDIVST MII+S Q  S 
Sbjct: 924  GSKKSSAKQTMSLFLSEKLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQNNS- 982

Query: 500  QQHFSPWICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSI 321
            Q+ FSPW+ HFH+ KEI+++  LK HS+ +SL   C +AR E K+ + ++LI+++ CS+ 
Sbjct: 983  QKRFSPWVTHFHICKEIVRKRRLKVHSVVDSLYARCNSARPELKVVLRSLLITSKGCSAA 1042

Query: 320  NMQKESNDPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQ 141
                  +D FC+TV + ENSK SS +L+  +  VIPFLL TVVKGF E+KKVDILW D+ 
Sbjct: 1043 QTCNGDDDTFCITVTMPENSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHP 1102

Query: 140  KAANSHKDSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            + +     SSGELYLRVSMSG   R  LWS LM+ CLQIM++IDWS
Sbjct: 1103 RESKKIHGSSGELYLRVSMSGKTGRRRLWSMLMDNCLQIMNLIDWS 1148


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  589 bits (1518), Expect = e-165
 Identities = 310/458 (67%), Positives = 359/458 (78%), Gaps = 14/458 (3%)
 Frame = -1

Query: 1337 SAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQHS 1158
            SAAL Q+SV AFK  F DIQNL Y+Y +KDNSLLAM KAGSKGNLLKLVQ  LCLGLQHS
Sbjct: 595  SAALCQSSVCAFKQKFRDIQNLVYQYANKDNSLLAMLKAGSKGNLLKLVQQGLCLGLQHS 654

Query: 1157 LAPLSFRFPHDLSCTAWNT-----LRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHS 993
            L PLSF+ PH LSC AWN      L   D +E A+SYIP AVVENSFL GLNPLECFVHS
Sbjct: 655  LVPLSFKIPHQLSCAAWNKQKVPGLIQNDTSEYAESYIPYAVVENSFLMGLNPLECFVHS 714

Query: 992  VTSRDSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTG 813
            VTSRDSSFSDNADLPGTLTRRLMFFMRDL+ AYDGTVRNAYGNQLVQFSYNIE TS P+ 
Sbjct: 715  VTSRDSSFSDNADLPGTLTRRLMFFMRDLYIAYDGTVRNAYGNQLVQFSYNIEHTSTPSD 774

Query: 812  ---------EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNA 660
                     ++GGQPVGS+SACAISEAAYSALDQPISLLE SPLLNLK VLECG +KS A
Sbjct: 775  GINEDTCAYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTA 834

Query: 659  DQTMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPW 480
            D+T+SL+LSKKL KR+HGFEYGALEVKNHLE L FSDIVST MI++SPQ GSK  HFSPW
Sbjct: 835  DRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSK-THFSPW 893

Query: 479  ICHFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESN 300
            +CHFHV +EI ++  LK HSI ++L + C +AR ESK+++P++ I+++DC  ++M+KE +
Sbjct: 894  VCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDC-FVDMEKEDS 952

Query: 299  DPFCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHK 120
            D FC+TV IV NSKKS I+L++++  VIPFLL  VVKG   IK  D+L           K
Sbjct: 953  DCFCITVSIV-NSKKSCIQLDTVRDLVIPFLLGAVVKGCC-IKNSDVL-----------K 999

Query: 119  DSSGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDW 6
             SSG LYLRV +SG C + + W  LM+ CLQIMDMIDW
Sbjct: 1000 SSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDW 1037


>ref|XP_011014513.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940107|ref|XP_011014514.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940109|ref|XP_011014516.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940111|ref|XP_011014517.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940113|ref|XP_011014518.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940115|ref|XP_011014519.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940117|ref|XP_011014520.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica] gi|743940119|ref|XP_011014522.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1-like [Populus
            euphratica]
          Length = 1488

 Score =  587 bits (1514), Expect = e-165
 Identities = 301/454 (66%), Positives = 350/454 (77%), Gaps = 8/454 (1%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQ+SVDAF+ VF DIQ+L Y+Y SKDNS LAMFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 717  RSAALSQSSVDAFRLVFRDIQSLVYRYASKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQH 776

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            +LA LSFR PH LSC  WN  ++ D TE AK YIP AVVE SFLSGLNP+ECFVHSVTSR
Sbjct: 777  ALASLSFRMPHQLSCAGWNKQKADDATESAKRYIPHAVVEGSFLSGLNPIECFVHSVTSR 836

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTG---- 813
            DSSFSDNADLPGTL RR+MFFMRDLH AYDGTVRNAYGNQLVQFSYNI+     +     
Sbjct: 837  DSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSSSVDEI 896

Query: 812  ----EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMS 645
                 I G+PVG L+ACAISEAAYSALDQPISLLE SPLLNLKNVLECG K+++A QTMS
Sbjct: 897  NKGDGIAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLKRNSAHQTMS 956

Query: 644  LYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWICHFH 465
            L+LS+KLG++RHGFEY ALEV+NHLE L FSDIVS   II+SPQ+  +  HFSPW+CHFH
Sbjct: 957  LFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGR-MHFSPWVCHFH 1015

Query: 464  VRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDPFCV 285
            V KEI+++  LK H I ++L+  CK     SK   P + I++R C+  +  KE  + FC+
Sbjct: 1016 VYKEIVKKRSLKMHYIIDALDKQCK-----SKTRFPKVQITSRYCTVADTWKEKKETFCI 1070

Query: 284  TVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDSSGE 105
            TV IVE SK   IELE+IQ  +IPFLL TV+KGF EI+KVDILW D  K   SH    GE
Sbjct: 1071 TVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIRKVDILWNDKPKIPKSHNRLRGE 1130

Query: 104  LYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            L+LRV MS    +T LW+ LM+ CL IMD+IDW+
Sbjct: 1131 LFLRVHMSRGSDKTRLWNQLMDDCLSIMDIIDWA 1164


>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 1475

 Score =  587 bits (1512), Expect = e-164
 Identities = 304/457 (66%), Positives = 355/457 (77%), Gaps = 11/457 (2%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQASVDAFKHVF DIQ L YKY SKDN+L+AMFK+GSKGNLLK+VQHS+CLGLQH
Sbjct: 697  RSAALSQASVDAFKHVFRDIQTLGYKYASKDNALMAMFKSGSKGNLLKVVQHSMCLGLQH 756

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            SL PLSFR P  LSC AWN  ++ +  ECA+SYIPSAVVE  FL+GLNPLECFVHSVTSR
Sbjct: 757  SLVPLSFRMPLQLSCDAWNKQKAENAVECARSYIPSAVVEGCFLTGLNPLECFVHSVTSR 816

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNI-EGTSAPT---- 816
            +SSFSDNADLPGTLTRRLMFFMRD+H AYDG+VR+AYGNQL+QFSYNI EG SA T    
Sbjct: 817  ESSFSDNADLPGTLTRRLMFFMRDVHAAYDGSVRSAYGNQLIQFSYNIDEGRSAETYGTA 876

Query: 815  ------GEIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQ 654
                    + G+PVGSL+AC+ISEAAYSALDQPISLLE SPLLNLKNVLECG KKSNA +
Sbjct: 877  KIVDNYDGMAGKPVGSLAACSISEAAYSALDQPISLLEKSPLLNLKNVLECGLKKSNAHK 936

Query: 653  TMSLYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWIC 474
            +MSL+LS+KLG+RRHGFEYGAL+V++HLE L FSDIVS S II+S Q+ SK   FSPW+C
Sbjct: 937  SMSLFLSEKLGRRRHGFEYGALKVQDHLERLLFSDIVSVSRIIFSSQSESK-TCFSPWVC 995

Query: 473  HFHVRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDP 294
            HFHV KEI+++  L   SI   LN  CK     S  ++PN+ IS + CS  +  +E  + 
Sbjct: 996  HFHVYKEIMKKRNLNVDSIINILNGRCK-----SNTNLPNVQISCKSCSIADNHREKEET 1050

Query: 293  FCVTVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDS 114
             C+TV IVE SK SS  L +IQ  +IPFLL TV+KG  EI KVDILWKD  + + +H   
Sbjct: 1051 LCITVTIVERSKNSSTRLATIQDLMIPFLLETVLKGLMEINKVDILWKDWPRISKTHNQP 1110

Query: 113  SGELYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
             GELYLRVSMS    +T LW+ LM+ CL IMDMIDW+
Sbjct: 1111 YGELYLRVSMSADSEKTRLWNLLMDYCLPIMDMIDWT 1147


>ref|XP_011029161.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852096|ref|XP_011029162.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852100|ref|XP_011029163.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852104|ref|XP_011029164.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852108|ref|XP_011029165.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852112|ref|XP_011029166.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852116|ref|XP_011029168.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852120|ref|XP_011029169.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica] gi|743852124|ref|XP_011029170.1| PREDICTED:
            DNA-directed RNA polymerase IV subunit 1 [Populus
            euphratica]
          Length = 1488

 Score =  585 bits (1509), Expect = e-164
 Identities = 300/454 (66%), Positives = 350/454 (77%), Gaps = 8/454 (1%)
 Frame = -1

Query: 1340 RSAALSQASVDAFKHVFWDIQNLAYKYGSKDNSLLAMFKAGSKGNLLKLVQHSLCLGLQH 1161
            RSAALSQ+SVDAF+ VF DIQ+L Y+Y SKDNS LAMFKAGSKGNLLKLVQHS+CLGLQH
Sbjct: 717  RSAALSQSSVDAFRLVFRDIQSLVYRYASKDNSFLAMFKAGSKGNLLKLVQHSMCLGLQH 776

Query: 1160 SLAPLSFRFPHDLSCTAWNTLRSGDNTECAKSYIPSAVVENSFLSGLNPLECFVHSVTSR 981
            +LA LSFR PH LSC  W+  ++ D TE AK YIP AVVE SFLSGLNP+ECFVHSVTSR
Sbjct: 777  ALASLSFRMPHQLSCAGWHKQKADDATESAKRYIPHAVVEGSFLSGLNPIECFVHSVTSR 836

Query: 980  DSSFSDNADLPGTLTRRLMFFMRDLHTAYDGTVRNAYGNQLVQFSYNIEGTSAPTG---- 813
            DSSFSDNADLPGTL RR+MFFMRDLH AYDGTVRNAYGNQLVQFSYNI+     +     
Sbjct: 837  DSSFSDNADLPGTLFRRMMFFMRDLHGAYDGTVRNAYGNQLVQFSYNIDDMDPSSSVDEI 896

Query: 812  ----EIGGQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMS 645
                 I G+PVG L+ACAISEAAYSALDQPISLLE SPLLNLKNVLECG K+++A QTMS
Sbjct: 897  NKGDGIAGRPVGPLAACAISEAAYSALDQPISLLEKSPLLNLKNVLECGLKRNSAHQTMS 956

Query: 644  LYLSKKLGKRRHGFEYGALEVKNHLECLTFSDIVSTSMIIYSPQTGSKQQHFSPWICHFH 465
            L+LS+KLG++RHGFEY ALEV+NHLE L FSDIVS   II+SPQ+  +  HFSPW+CHFH
Sbjct: 957  LFLSEKLGRQRHGFEYAALEVQNHLERLLFSDIVSFVRIIFSPQSDGR-MHFSPWVCHFH 1015

Query: 464  VRKEILQRTGLKEHSIFESLNLHCKAARTESKMSVPNMLISNRDCSSINMQKESNDPFCV 285
            V KEI+++  LK H I ++L+  CK     SK   P + I++R C+  +  KE  + FC+
Sbjct: 1016 VYKEIVKKRSLKMHYIIDALDKQCK-----SKTRFPKVQITSRYCTVADTWKEKKETFCI 1070

Query: 284  TVMIVENSKKSSIELESIQKWVIPFLLRTVVKGFREIKKVDILWKDNQKAANSHKDSSGE 105
            TV IVE SK   IELE+IQ  +IPFLL TV+KGF EI+KVDILW D  K   SH    GE
Sbjct: 1071 TVTIVETSKNEFIELETIQDLMIPFLLETVIKGFMEIRKVDILWNDKPKIPKSHNRLRGE 1130

Query: 104  LYLRVSMSGHCRRTSLWSALMNGCLQIMDMIDWS 3
            L+LRV MS    +T LW+ LM+ CL IMD+IDW+
Sbjct: 1131 LFLRVHMSRGSDKTRLWNQLMDDCLSIMDIIDWA 1164