BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00019812
         (1391 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citr...   375   e-164
ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citr...   375   e-164
ref|XP_007046993.1| Transcription regulators,zinc ion binding, p...   255   e-111
ref|XP_007046991.1| SIN-like family protein, putative isoform 1 ...   255   e-111
ref|XP_007046992.1| Transcription regulators,zinc ion binding, p...   247   e-109
ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III s...   224   e-104
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   223   e-103
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   215   e-103
ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III s...   224   e-102
ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III s...   231   e-101
ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III s...   215   e-101
gb|KJB43539.1| hypothetical protein B456_007G205200 [Gossypium r...   231   e-101
gb|KHG05676.1| DNA-directed RNA polymerase III subunit RPC5 [Gos...   231   e-100
gb|KJB14964.1| hypothetical protein B456_002G1516002, partial [G...   229   e-100
ref|XP_010099361.1| DNA-directed RNA polymerase III subunit RPC5...   233   1e-99
ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III s...   221   1e-99
gb|KDO79497.1| hypothetical protein CISIN_1g0055732mg, partial [...   360   2e-96
ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III s...   224   3e-93
ref|XP_008453720.1| PREDICTED: DNA-directed RNA polymerase III s...   224   3e-93
ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III s...   223   1e-92

>ref|XP_006425717.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|568824759|ref|XP_006466762.1| PREDICTED: DNA-directed
            RNA polymerase III subunit RPC5-like [Citrus sinensis]
            gi|557527707|gb|ESR38957.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 690

 Score =  375 bits (963), Expect(2) = e-164
 Identities = 202/272 (74%), Positives = 213/272 (78%)
 Frame = -3

Query: 1203 KVKPSQVPSRVSRFLXXXXXXXXXXXXXXXXXXPQQLEKPKTEVIIQRQPQTTVNLTTKT 1024
            K  PSQVPSRVSRFL                  PQQ +KPKTE   Q+   T+VNLT KT
Sbjct: 11   KATPSQVPSRVSRFLPKSSKLVPKPEPPPEKAEPQQPKKPKTEDNFQQT--TSVNLTPKT 68

Query: 1023 EPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSIDAD 844
            EPS+SNGDVK+                 VDLNMDELHLQ DEDMIVREIDVFFTPSIDAD
Sbjct: 69   EPSVSNGDVKLESKPVPEPETEPRKEEPVDLNMDELHLQDDEDMIVREIDVFFTPSIDAD 128

Query: 843  SKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNMTK 664
            SKLYVMQYPLRP WRP+ELDE CEEVRVKPSTSEVEMDLSIDVDSNNWDSEK SRL+M K
Sbjct: 129  SKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPK 188

Query: 663  QTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEISV 484
            QTL T WMPPQ TGYA+GVL+GNKLHLNPIHAVVQLRTSM FLKS GSK KNNVA EI V
Sbjct: 189  QTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRKNNVASEIPV 248

Query: 483  KLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
            KLEDSNQDKSVGSSKKQNKRMG S+EQ+SNEE
Sbjct: 249  KLEDSNQDKSVGSSKKQNKRMG-SIEQRSNEE 279



 Score =  234 bits (597), Expect(2) = e-164
 Identities = 109/136 (80%), Positives = 123/136 (90%)
 Frame = -1

Query: 410 LSKNQMKKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNN 231
           + +   +++CWVPLKYHGSKSDFSARYLQRML+EENSPIHFTMNPYDYV+SLCPG+G+NN
Sbjct: 272 IEQRSNEEECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNN 331

Query: 230 TTSKCRSRRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQ 51
           T SK  SRRFLLS+PLEERFKKLLCE EPVQRFS LMHFAP+D VED++GVLHK  LLVQ
Sbjct: 332 TKSKGPSRRFLLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQ 391

Query: 50  GLWAPRSFLLFNNDKV 3
           GLWAPRS LLFNNDK+
Sbjct: 392 GLWAPRSPLLFNNDKM 407


>ref|XP_006425716.1| hypothetical protein CICLE_v10025048mg [Citrus clementina]
            gi|557527706|gb|ESR38956.1| hypothetical protein
            CICLE_v10025048mg [Citrus clementina]
          Length = 637

 Score =  375 bits (963), Expect(2) = e-164
 Identities = 202/272 (74%), Positives = 213/272 (78%)
 Frame = -3

Query: 1203 KVKPSQVPSRVSRFLXXXXXXXXXXXXXXXXXXPQQLEKPKTEVIIQRQPQTTVNLTTKT 1024
            K  PSQVPSRVSRFL                  PQQ +KPKTE   Q+   T+VNLT KT
Sbjct: 11   KATPSQVPSRVSRFLPKSSKLVPKPEPPPEKAEPQQPKKPKTEDNFQQT--TSVNLTPKT 68

Query: 1023 EPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSIDAD 844
            EPS+SNGDVK+                 VDLNMDELHLQ DEDMIVREIDVFFTPSIDAD
Sbjct: 69   EPSVSNGDVKLESKPVPEPETEPRKEEPVDLNMDELHLQDDEDMIVREIDVFFTPSIDAD 128

Query: 843  SKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNMTK 664
            SKLYVMQYPLRP WRP+ELDE CEEVRVKPSTSEVEMDLSIDVDSNNWDSEK SRL+M K
Sbjct: 129  SKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPK 188

Query: 663  QTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEISV 484
            QTL T WMPPQ TGYA+GVL+GNKLHLNPIHAVVQLRTSM FLKS GSK KNNVA EI V
Sbjct: 189  QTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKRKNNVASEIPV 248

Query: 483  KLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
            KLEDSNQDKSVGSSKKQNKRMG S+EQ+SNEE
Sbjct: 249  KLEDSNQDKSVGSSKKQNKRMG-SIEQRSNEE 279



 Score =  234 bits (597), Expect(2) = e-164
 Identities = 109/136 (80%), Positives = 123/136 (90%)
 Frame = -1

Query: 410 LSKNQMKKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNN 231
           + +   +++CWVPLKYHGSKSDFSARYLQRML+EENSPIHFTMNPYDYV+SLCPG+G+NN
Sbjct: 272 IEQRSNEEECWVPLKYHGSKSDFSARYLQRMLVEENSPIHFTMNPYDYVSSLCPGAGSNN 331

Query: 230 TTSKCRSRRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQ 51
           T SK  SRRFLLS+PLEERFKKLLCE EPVQRFS LMHFAP+D VED++GVLHK  LLVQ
Sbjct: 332 TKSKGPSRRFLLSMPLEERFKKLLCEGEPVQRFSTLMHFAPNDTVEDVIGVLHKNGLLVQ 391

Query: 50  GLWAPRSFLLFNNDKV 3
           GLWAPRS LLFNNDK+
Sbjct: 392 GLWAPRSPLLFNNDKM 407


>ref|XP_007046993.1| Transcription regulators,zinc ion binding, putative isoform 3
            [Theobroma cacao] gi|508699254|gb|EOX91150.1|
            Transcription regulators,zinc ion binding, putative
            isoform 3 [Theobroma cacao]
          Length = 736

 Score =  255 bits (652), Expect(2) = e-111
 Identities = 135/217 (62%), Positives = 166/217 (76%), Gaps = 2/217 (0%)
 Frame = -3

Query: 1032 TKTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSI 853
            TKTE S SNG VKM                  D+ M+E + + +EDM+VREIDVFFTPSI
Sbjct: 85   TKTEQSFSNGAVKMEIEEEAKE----------DVIMNEGNRE-EEDMVVREIDVFFTPSI 133

Query: 852  DADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLN 673
            DA+++LYV+QYPLRP WRP+ELDE CEEVRVKP++ EVEMDL++DVDSNN+DSE+ SRL 
Sbjct: 134  DANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLK 193

Query: 672  MTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVA-- 499
            MTKQTL + W+PP+TTGYAVGVL+G+KLHLNPIHAVVQLR SM  LK   SK KN  A  
Sbjct: 194  MTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAAD 253

Query: 498  GEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             E++VK+E+ N  K+ GSS KQNKRM SS EQK++++
Sbjct: 254  AEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDK 290



 Score =  177 bits (450), Expect(2) = e-111
 Identities = 86/127 (67%), Positives = 101/127 (79%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SK+DFSA+YLQRM+ EE+  I FTM+PYDYV+SLCPG+ NNN  ++  S
Sbjct: 290 KECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPS 348

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           RR LLS+PLEER KKLL E  P  RFSAL HFAPD ++EDI  VL K+ALLVQGLW P+S
Sbjct: 349 RRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKS 408

Query: 29  FLLFNND 9
            LLF  D
Sbjct: 409 SLLFPED 415


>ref|XP_007046991.1| SIN-like family protein, putative isoform 1 [Theobroma cacao]
            gi|508699252|gb|EOX91148.1| SIN-like family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 700

 Score =  255 bits (652), Expect(2) = e-111
 Identities = 135/217 (62%), Positives = 166/217 (76%), Gaps = 2/217 (0%)
 Frame = -3

Query: 1032 TKTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSI 853
            TKTE S SNG VKM                  D+ M+E + + +EDM+VREIDVFFTPSI
Sbjct: 85   TKTEQSFSNGAVKMEIEEEAKE----------DVIMNEGNRE-EEDMVVREIDVFFTPSI 133

Query: 852  DADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLN 673
            DA+++LYV+QYPLRP WRP+ELDE CEEVRVKP++ EVEMDL++DVDSNN+DSE+ SRL 
Sbjct: 134  DANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLAVDVDSNNYDSERASRLK 193

Query: 672  MTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVA-- 499
            MTKQTL + W+PP+TTGYAVGVL+G+KLHLNPIHAVVQLR SM  LK   SK KN  A  
Sbjct: 194  MTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSMCHLKPSVSKRKNAAAAD 253

Query: 498  GEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             E++VK+E+ N  K+ GSS KQNKRM SS EQK++++
Sbjct: 254  AEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDK 290



 Score =  177 bits (450), Expect(2) = e-111
 Identities = 86/127 (67%), Positives = 101/127 (79%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SK+DFSA+YLQRM+ EE+  I FTM+PYDYV+SLCPG+ NNN  ++  S
Sbjct: 290 KECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPS 348

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           RR LLS+PLEER KKLL E  P  RFSAL HFAPD ++EDI  VL K+ALLVQGLW P+S
Sbjct: 349 RRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKS 408

Query: 29  FLLFNND 9
            LLF  D
Sbjct: 409 SLLFPED 415


>ref|XP_007046992.1| Transcription regulators,zinc ion binding, putative isoform 2
           [Theobroma cacao] gi|508699253|gb|EOX91149.1|
           Transcription regulators,zinc ion binding, putative
           isoform 2 [Theobroma cacao]
          Length = 588

 Score =  247 bits (630), Expect(2) = e-109
 Identities = 121/174 (69%), Positives = 148/174 (85%), Gaps = 2/174 (1%)
 Frame = -3

Query: 903 DEDMIVREIDVFFTPSIDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLS 724
           +EDM+VREIDVFFTPSIDA+++LYV+QYPLRP WRP+ELDE CEEVRVKP++ EVEMDL+
Sbjct: 20  EEDMVVREIDVFFTPSIDANTQLYVLQYPLRPCWRPYELDERCEEVRVKPASGEVEMDLA 79

Query: 723 IDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSM 544
           +DVDSNN+DSE+ SRL MTKQTL + W+PP+TTGYAVGVL+G+KLHLNPIHAVVQLR SM
Sbjct: 80  VDVDSNNYDSERASRLKMTKQTLSSSWLPPRTTGYAVGVLMGDKLHLNPIHAVVQLRPSM 139

Query: 543 EFLKSCGSKWKNNVA--GEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             LK   SK KN  A   E++VK+E+ N  K+ GSS KQNKRM SS EQK++++
Sbjct: 140 CHLKPSVSKRKNAAAADAEVTVKVEEPNDGKAAGSSTKQNKRMQSSTEQKADDK 193



 Score =  177 bits (450), Expect(2) = e-109
 Identities = 86/127 (67%), Positives = 101/127 (79%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SK+DFSA+YLQRM+ EE+  I FTM+PYDYV+SLCPG+ NNN  ++  S
Sbjct: 193 KECWVPLKYHSSKNDFSAQYLQRMMAEESCRIQFTMSPYDYVDSLCPGASNNNK-AQGPS 251

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           RR LLS+PLEER KKLL E  P  RFSAL HFAPD ++EDI  VL K+ALLVQGLW P+S
Sbjct: 252 RRLLLSIPLEERLKKLLSEGPPFHRFSALKHFAPDASIEDIFEVLQKHALLVQGLWVPKS 311

Query: 29  FLLFNND 9
            LLF  D
Sbjct: 312 SLLFPED 318


>ref|XP_010649170.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
           [Vitis vinifera] gi|297735187|emb|CBI17549.3| unnamed
           protein product [Vitis vinifera]
          Length = 688

 Score =  224 bits (571), Expect(2) = e-104
 Identities = 114/173 (65%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
 Frame = -3

Query: 903 DEDMIVREIDVFFTPS-IDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDL 727
           DED +VREIDVFFTP   D ++K+YV+QYPLRP WRP+EL E C+EVRVKP+++EVE+DL
Sbjct: 98  DEDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDL 157

Query: 726 SIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTS 547
           SIDVDS N+D +  +   M KQTL T W PPQTTGY VGVL+GNKLHLNPIHAVVQLR S
Sbjct: 158 SIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPS 217

Query: 546 MEFLKSCGSKWKNNVAGEI--SVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSN 394
           ME+L S G+K KNNV G+   +VKLE SN+++SVGS KKQNK MG   EQ ++
Sbjct: 218 MEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTD 270



 Score =  182 bits (463), Expect(2) = e-104
 Identities = 90/134 (67%), Positives = 107/134 (79%), Gaps = 1/134 (0%)
 Frame = -1

Query: 416 LLLSKNQMKKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCP-GSG 240
           +L  +N    + WVPLKYH S+SDFSARYLQ+M+ E+NSPI F M+PY+YVNSLCP G  
Sbjct: 263 ILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVS 322

Query: 239 NNNTTSKCRSRRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYAL 60
           N++  SK  SRRFLLS+PLEERFK LLCE  PV RFSAL HFAPD++VED+LGVL K+A 
Sbjct: 323 NDDNRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAH 382

Query: 59  LVQGLWAPRSFLLF 18
           LVQGLW P+S LLF
Sbjct: 383 LVQGLWVPKSSLLF 396


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  223 bits (568), Expect(2) = e-103
 Identities = 137/280 (48%), Positives = 166/280 (59%), Gaps = 25/280 (8%)
 Frame = -3

Query: 1197 KPSQVPSRVSRFLXXXXXXXXXXXXXXXXXXPQQLEKPKTEVIIQRQPQTT--------- 1045
            KPSQVPSR S++                     QL    +E+   ++PQ           
Sbjct: 9    KPSQVPSRPSKYAPKSAKFKPQPKTKPNPKPDPQLPSSNSEL---QEPQNAPLSKKNEDD 65

Query: 1044 --------VNLTTKTEPSLSN-GDVKMXXXXXXXXXXXXXXXXXVDLNMDE-------LH 913
                    +  T K E  LSN G VKM                  D +MDE         
Sbjct: 66   EEEEIKPKIISTPKNEAWLSNNGAVKMEI----------------DDSMDEDKREEGENE 109

Query: 912  LQGDEDMIVREIDVFFTPSIDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEM 733
             + +EDMIVREIDVFFTPSID+ ++LYVMQYPLRP WRP+ELDE CEEVRVKP ++EVE+
Sbjct: 110  EEEEEDMIVREIDVFFTPSIDSATQLYVMQYPLRPCWRPYELDERCEEVRVKPQSTEVEV 169

Query: 732  DLSIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLR 553
            DL+ID DS+NWD  + S+ N  KQTL T +MPP+ TGYAVGVL+GNKLHLNPIHAVVQLR
Sbjct: 170  DLTID-DSSNWDPAQASKYNFKKQTLSTSFMPPRVTGYAVGVLIGNKLHLNPIHAVVQLR 228

Query: 552  TSMEFLKSCGSKWKNNVAGEISVKLEDSNQDKSVGSSKKQ 433
             S+E + S  SK KN+      VKLEDSN+ K +GSSKKQ
Sbjct: 229  PSLEHVNSNDSKRKNSATLNPEVKLEDSNEGKPIGSSKKQ 268



 Score =  181 bits (460), Expect(2) = e-103
 Identities = 84/125 (67%), Positives = 101/125 (80%)
 Frame = -1

Query: 392 KKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCR 213
           KKQCW+ LKYHGSKSDFS+RYL++M+ +E+SP+ FTM PYDY++SLCP + N  T SK  
Sbjct: 266 KKQCWISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGP 325

Query: 212 SRRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPR 33
            RRFLLS+PL ER KKL+ E  PVQRFS L HFAPDD+VED+L VL +Y  LVQGLWAP+
Sbjct: 326 PRRFLLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPK 385

Query: 32  SFLLF 18
           S LLF
Sbjct: 386 SSLLF 390


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X4
           [Vitis vinifera]
          Length = 672

 Score =  215 bits (548), Expect(2) = e-103
 Identities = 108/161 (67%), Positives = 131/161 (81%), Gaps = 3/161 (1%)
 Frame = -3

Query: 903 DEDMIVREIDVFFTPS-IDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDL 727
           DED +VREIDVFFTP   D ++K+YV+QYPLRP WRP+EL E C+EVRVKP+++EVE+DL
Sbjct: 98  DEDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDL 157

Query: 726 SIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTS 547
           SIDVDS N+D +  +   M KQTL T W PPQTTGY VGVL+GNKLHLNPIHAVVQLR S
Sbjct: 158 SIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPS 217

Query: 546 MEFLKSCGSKWKNNVAGEI--SVKLEDSNQDKSVGSSKKQN 430
           ME+L S G+K KNNV G+   +VKLE SN+++SVGS KKQ+
Sbjct: 218 MEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQS 258



 Score =  188 bits (477), Expect(2) = e-103
 Identities = 92/131 (70%), Positives = 107/131 (81%), Gaps = 1/131 (0%)
 Frame = -1

Query: 407 SKNQMKKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCP-GSGNNN 231
           S   +KKQ WVPLKYH S+SDFSARYLQ+M+ E+NSPI F M+PY+YVNSLCP G  N++
Sbjct: 250 SVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDD 309

Query: 230 TTSKCRSRRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQ 51
             SK  SRRFLLS+PLEERFK LLCE  PV RFSAL HFAPD++VED+LGVL K+A LVQ
Sbjct: 310 NRSKGLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQ 369

Query: 50  GLWAPRSFLLF 18
           GLW P+S LLF
Sbjct: 370 GLWVPKSSLLF 380


>ref|XP_010649168.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
           [Vitis vinifera] gi|731387214|ref|XP_010649169.1|
           PREDICTED: DNA-directed RNA polymerase III subunit RPC5
           isoform X1 [Vitis vinifera]
          Length = 693

 Score =  224 bits (571), Expect(2) = e-102
 Identities = 114/173 (65%), Positives = 138/173 (79%), Gaps = 3/173 (1%)
 Frame = -3

Query: 903 DEDMIVREIDVFFTPS-IDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDL 727
           DED +VREIDVFFTP   D ++K+YV+QYPLRP WRP+EL E C+EVRVKP+++EVE+DL
Sbjct: 98  DEDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDL 157

Query: 726 SIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTS 547
           SIDVDS N+D +  +   M KQTL T W PPQTTGY VGVL+GNKLHLNPIHAVVQLR S
Sbjct: 158 SIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPS 217

Query: 546 MEFLKSCGSKWKNNVAGEI--SVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSN 394
           ME+L S G+K KNNV G+   +VKLE SN+++SVGS KKQNK MG   EQ ++
Sbjct: 218 MEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQNKIMGILDEQNTD 270



 Score =  176 bits (447), Expect(2) = e-102
 Identities = 90/139 (64%), Positives = 107/139 (76%), Gaps = 6/139 (4%)
 Frame = -1

Query: 416 LLLSKNQMKKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLC-PGSG 240
           +L  +N    + WVPLKYH S+SDFSARYLQ+M+ E+NSPI F M+PY+YVNSLC PG  
Sbjct: 263 ILDEQNTDAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVS 322

Query: 239 NNNTTSKCRSRRFLLSVPLEERFKKLLCE-----AEPVQRFSALMHFAPDDNVEDILGVL 75
           N++  SK  SRRFLLS+PLEERFK LLCE       PV RFSAL HFAPD++VED+LGVL
Sbjct: 323 NDDNRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVL 382

Query: 74  HKYALLVQGLWAPRSFLLF 18
            K+A LVQGLW P+S LLF
Sbjct: 383 TKHAHLVQGLWVPKSSLLF 401


>ref|XP_012491679.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Gossypium raimondii] gi|763776418|gb|KJB43541.1|
            hypothetical protein B456_007G205200 [Gossypium
            raimondii] gi|763776419|gb|KJB43542.1| hypothetical
            protein B456_007G205200 [Gossypium raimondii]
          Length = 703

 Score =  231 bits (588), Expect(2) = e-101
 Identities = 121/215 (56%), Positives = 157/215 (73%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1029 KTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSID 850
            K E S+SNG VKM                  + N +E   + +EDM+VREIDVFFTPSID
Sbjct: 84   KAEQSISNGAVKMEIDEETKEDEILT-----EANREEDQGE-EEDMVVREIDVFFTPSID 137

Query: 849  ADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNM 670
            AD++LYV+QYPLRP WRP+ELDE C+EVRVKP + EVE+D+S+DVDSNN+DSE  ++L M
Sbjct: 138  ADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSWEVEIDMSVDVDSNNYDSESANKLKM 197

Query: 669  TKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEI 490
            TKQTL + W+PP+ +GYAVGVL+G+KLHLNPIHAVVQLR S+  LKS  SK K+ VA E 
Sbjct: 198  TKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVSKRKDTVAAEA 257

Query: 489  SVKLE-DSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             V ++ + N  K+ G S KQN+++ SS EQK+ ++
Sbjct: 258  EVTVKVEPNDGKAAGPSAKQNQKVQSSTEQKAEDK 292



 Score =  166 bits (421), Expect(2) = e-101
 Identities = 79/128 (61%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SKSDFSA+YLQ+M+ E++SPI FT+NPYDYV+SLCP   NNN   +  S
Sbjct: 292 KECWVPLKYHSSKSDFSAQYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNNKAQRL-S 350

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSAL-MHFAPDDNVEDILGVLHKYALLVQGLWAPR 33
           RR L S+PLE+R KKLL E  P   F+ L  H+APDD +E++  VL K+ALLVQGLW P+
Sbjct: 351 RRLLCSIPLEDRLKKLLTEGRPFHHFNTLKRHYAPDDPIEEVFEVLQKHALLVQGLWVPK 410

Query: 32  SFLLFNND 9
           S LLF  D
Sbjct: 411 SSLLFPGD 418


>ref|XP_010649171.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X3
           [Vitis vinifera]
          Length = 677

 Score =  215 bits (548), Expect(2) = e-101
 Identities = 108/161 (67%), Positives = 131/161 (81%), Gaps = 3/161 (1%)
 Frame = -3

Query: 903 DEDMIVREIDVFFTPS-IDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDL 727
           DED +VREIDVFFTP   D ++K+YV+QYPLRP WRP+EL E C+EVRVKP+++EVE+DL
Sbjct: 98  DEDPVVREIDVFFTPPPTDDNTKIYVLQYPLRPYWRPYELGERCDEVRVKPASAEVEVDL 157

Query: 726 SIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTS 547
           SIDVDS N+D +  +   M KQTL T W PPQTTGY VGVL+GNKLHLNPIHAVVQLR S
Sbjct: 158 SIDVDSKNYDPDAPNAQRMKKQTLSTSWKPPQTTGYVVGVLMGNKLHLNPIHAVVQLRPS 217

Query: 546 MEFLKSCGSKWKNNVAGEI--SVKLEDSNQDKSVGSSKKQN 430
           ME+L S G+K KNNV G+   +VKLE SN+++SVGS KKQ+
Sbjct: 218 MEYLSSGGAKRKNNVTGDTNSAVKLEVSNEEESVGSLKKQS 258



 Score =  182 bits (461), Expect(2) = e-101
 Identities = 92/136 (67%), Positives = 107/136 (78%), Gaps = 6/136 (4%)
 Frame = -1

Query: 407 SKNQMKKQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLC-PGSGNNN 231
           S   +KKQ WVPLKYH S+SDFSARYLQ+M+ E+NSPI F M+PY+YVNSLC PG  N++
Sbjct: 250 SVGSLKKQSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDD 309

Query: 230 TTSKCRSRRFLLSVPLEERFKKLLCE-----AEPVQRFSALMHFAPDDNVEDILGVLHKY 66
             SK  SRRFLLS+PLEERFK LLCE       PV RFSAL HFAPD++VED+LGVL K+
Sbjct: 310 NRSKGLSRRFLLSMPLEERFKTLLCEKFSLQGPPVHRFSALKHFAPDNSVEDVLGVLTKH 369

Query: 65  ALLVQGLWAPRSFLLF 18
           A LVQGLW P+S LLF
Sbjct: 370 AHLVQGLWVPKSSLLF 385


>gb|KJB43539.1| hypothetical protein B456_007G205200 [Gossypium raimondii]
          Length = 653

 Score =  231 bits (588), Expect(2) = e-101
 Identities = 121/215 (56%), Positives = 157/215 (73%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1029 KTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSID 850
            K E S+SNG VKM                  + N +E   + +EDM+VREIDVFFTPSID
Sbjct: 84   KAEQSISNGAVKMEIDEETKEDEILT-----EANREEDQGE-EEDMVVREIDVFFTPSID 137

Query: 849  ADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNM 670
            AD++LYV+QYPLRP WRP+ELDE C+EVRVKP + EVE+D+S+DVDSNN+DSE  ++L M
Sbjct: 138  ADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSWEVEIDMSVDVDSNNYDSESANKLKM 197

Query: 669  TKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEI 490
            TKQTL + W+PP+ +GYAVGVL+G+KLHLNPIHAVVQLR S+  LKS  SK K+ VA E 
Sbjct: 198  TKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVSKRKDTVAAEA 257

Query: 489  SVKLE-DSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             V ++ + N  K+ G S KQN+++ SS EQK+ ++
Sbjct: 258  EVTVKVEPNDGKAAGPSAKQNQKVQSSTEQKAEDK 292



 Score =  166 bits (421), Expect(2) = e-101
 Identities = 79/128 (61%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SKSDFSA+YLQ+M+ E++SPI FT+NPYDYV+SLCP   NNN   +  S
Sbjct: 292 KECWVPLKYHSSKSDFSAQYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNNKAQRL-S 350

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSAL-MHFAPDDNVEDILGVLHKYALLVQGLWAPR 33
           RR L S+PLE+R KKLL E  P   F+ L  H+APDD +E++  VL K+ALLVQGLW P+
Sbjct: 351 RRLLCSIPLEDRLKKLLTEGRPFHHFNTLKRHYAPDDPIEEVFEVLQKHALLVQGLWVPK 410

Query: 32  SFLLFNND 9
           S LLF  D
Sbjct: 411 SSLLFPGD 418


>gb|KHG05676.1| DNA-directed RNA polymerase III subunit RPC5 [Gossypium arboreum]
          Length = 710

 Score =  231 bits (590), Expect(2) = e-100
 Identities = 120/215 (55%), Positives = 157/215 (73%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1029 KTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSID 850
            K E S+SNG VKM                  + N +E   + +EDM+VREIDVFFTPSID
Sbjct: 91   KAEQSISNGAVKMEIDEDTKEDEILT-----EANREEDQGE-EEDMVVREIDVFFTPSID 144

Query: 849  ADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNM 670
            AD++LYV+QYPLRP WRP+ELDE C+EVRVKP + EVE+D+S+D+DSNN+DSE  ++L M
Sbjct: 145  ADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSGEVEIDMSVDIDSNNYDSESANKLKM 204

Query: 669  TKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEI 490
            TKQTL + W+PP+ +GYAVGVL+G+KLHLNPIHAVVQLR S+  LKS  SK K+ VA E 
Sbjct: 205  TKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIHAVVQLRPSLAHLKSGVSKRKDTVAAEA 264

Query: 489  SVKLE-DSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             V ++ + N  K+ G S KQN+++ SS EQK+ ++
Sbjct: 265  EVTVKVEPNDGKAAGPSAKQNQKVQSSTEQKAEDK 299



 Score =  163 bits (412), Expect(2) = e-100
 Identities = 78/128 (60%), Positives = 99/128 (77%), Gaps = 1/128 (0%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SKSDFSA+YLQ+M+ E++SPI FT+NPYDYV+SLCP   +NN+ S+  S
Sbjct: 299 KECWVPLKYHSSKSDFSAQYLQKMMAEQSSPIEFTLNPYDYVDSLCP-LPSNNSKSQRLS 357

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSAL-MHFAPDDNVEDILGVLHKYALLVQGLWAPR 33
           RR L S+PLE+R KKLL E  P   F+ L  H+AP+D +E++  VL K+ALLVQGLW P+
Sbjct: 358 RRLLCSIPLEDRLKKLLTEGRPFHHFNTLKRHYAPNDPIEEVFEVLQKHALLVQGLWVPK 417

Query: 32  SFLLFNND 9
           S LLF  D
Sbjct: 418 SSLLFPGD 425


>gb|KJB14964.1| hypothetical protein B456_002G1516002, partial [Gossypium raimondii]
          Length = 625

 Score =  229 bits (583), Expect(2) = e-100
 Identities = 120/215 (55%), Positives = 156/215 (72%), Gaps = 1/215 (0%)
 Frame = -3

Query: 1029 KTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSID 850
            K E S+SNG VKM                  + N +E   + +EDM+VREIDVFFTPSID
Sbjct: 20   KAEQSISNGAVKMEIDEETKEDEILT-----EANREEDQGE-EEDMVVREIDVFFTPSID 73

Query: 849  ADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNM 670
            AD++LYV+QYPLRP WRP+ELDE C+EVRVKP + EVE+D+S+DVDSNN+DSE  ++L M
Sbjct: 74   ADAQLYVLQYPLRPCWRPYELDERCKEVRVKPDSGEVEIDMSVDVDSNNYDSESANKLKM 133

Query: 669  TKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEI 490
            TKQTL + W+PP+ +GYAVGVL+G+KLHLNPI AVVQLR S+  LKS  SK K+ VA E 
Sbjct: 134  TKQTLSSSWLPPRPSGYAVGVLMGDKLHLNPIRAVVQLRPSLAHLKSGVSKRKDTVAAEA 193

Query: 489  SVKLE-DSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
             V ++ + N  K+ G S KQN+++ SS EQK+ ++
Sbjct: 194  EVTVKVEPNDGKAAGPSAKQNQKVQSSTEQKAEDK 228



 Score =  166 bits (419), Expect(2) = e-100
 Identities = 79/128 (61%), Positives = 97/128 (75%), Gaps = 1/128 (0%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           K+CWVPLKYH SKSDFSA+YLQ+M+ E++SPI FT+NPYDYV+SLCP   NNN   +  S
Sbjct: 228 KECWVPLKYHSSKSDFSAQYLQKMMAEQSSPIEFTLNPYDYVDSLCPLPSNNNKAQRL-S 286

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSAL-MHFAPDDNVEDILGVLHKYALLVQGLWAPR 33
           RR L S+PLE+R KKLL E  P   F+ L  H+APDD +E++  VL K+ALLVQGLW P+
Sbjct: 287 RRLLCSIPLEDRLKKLLTEGRPFHHFNTLKRHYAPDDPMEEVFEVLQKHALLVQGLWVPK 346

Query: 32  SFLLFNND 9
           S LLF  D
Sbjct: 347 SSLLFPGD 354


>ref|XP_010099361.1| DNA-directed RNA polymerase III subunit RPC5 [Morus notabilis]
            gi|587889203|gb|EXB77882.1| DNA-directed RNA polymerase
            III subunit RPC5 [Morus notabilis]
          Length = 732

 Score =  233 bits (594), Expect(2) = 1e-99
 Identities = 140/278 (50%), Positives = 170/278 (61%), Gaps = 9/278 (3%)
 Frame = -3

Query: 1194 PSQVPSRVSRFLXXXXXXXXXXXXXXXXXXPQQLEK-PKTEV---IIQRQPQTTVNLTTK 1027
            PSQVPSRVSRF                          PKTE      + +PQ       K
Sbjct: 9    PSQVPSRVSRFAPKFSKLKPKSKSELASAQESLGSVLPKTETGQTAPKPEPQEFEAKKEK 68

Query: 1026 ---TEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPS 856
                +P   NG VKM                      D + ++ +EDM+VREIDVFF P 
Sbjct: 69   EIDAKPKPENGFVKMEVDSAAGAKEEPEEN-------DSMEVEAEEDMVVREIDVFFNPK 121

Query: 855  IDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRL 676
            ID  ++LYV+QYPLRP WRP+ELDE CEEVRVKP++SEVEMDLS+DVDS N+D + G RL
Sbjct: 122  IDEGTQLYVLQYPLRPSWRPYELDERCEEVRVKPASSEVEMDLSLDVDSKNYDPDCGDRL 181

Query: 675  NMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVA- 499
            NMTKQTL   W  P+ T YAVGVL+GNKLHLN IHAV+QLR S++ L S GSK KNNV  
Sbjct: 182  NMTKQTLCCSWDQPRATRYAVGVLMGNKLHLNRIHAVMQLRPSLKHLISAGSKKKNNVKV 241

Query: 498  -GEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
              E +VKLE+S+  K++GSSKKQ K+  SSV+QK  +E
Sbjct: 242  DAEDTVKLEESSGKKAIGSSKKQIKQENSSVKQKIADE 279



 Score =  160 bits (404), Expect(2) = 1e-99
 Identities = 78/126 (61%), Positives = 93/126 (73%), Gaps = 1/126 (0%)
 Frame = -1

Query: 380 WVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRSRRF 201
           WVPLKYHGS+S+ S RYL++M ++E+SP+ FTM+PYDY+NSLCPGS  N    K  SRR 
Sbjct: 282 WVPLKYHGSESESSVRYLRKMAVQESSPLQFTMSPYDYLNSLCPGSCKNGNEPKGPSRRA 341

Query: 200 LLSVPLEERFKKLLCEA-EPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRSFL 24
           LLS+PLEER K LLCE   PV RFS L HFAPD   ++IL  L  +ALLVQGLWAP+S L
Sbjct: 342 LLSLPLEERIKSLLCEGLAPVHRFSVLKHFAPDCTTKEILDALQNHALLVQGLWAPKSSL 401

Query: 23  LFNNDK 6
           L    K
Sbjct: 402 LLGTSK 407


>ref|XP_012079063.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|802640898|ref|XP_012079065.1| PREDICTED:
            DNA-directed RNA polymerase III subunit RPC5 [Jatropha
            curcas] gi|643721913|gb|KDP31792.1| hypothetical protein
            JCGZ_12253 [Jatropha curcas]
          Length = 720

 Score =  221 bits (563), Expect(2) = 1e-99
 Identities = 133/292 (45%), Positives = 174/292 (59%), Gaps = 23/292 (7%)
 Frame = -3

Query: 1194 PSQVPSRVSRFLXXXXXXXXXXXXXXXXXXPQQLEKPKTEVIIQRQPQTT---------- 1045
            P QVPSR S+F                     + E  ++  + + +PQ            
Sbjct: 12   PKQVPSRTSKFAPKSSKFKPQPKEKVKTEPSAKPELQESVSVPKVEPQKAFSDKKNEGEE 71

Query: 1044 -----VNLTTKTEPSLS-NGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQG-----DE 898
                 +    KTEPS+S NG VKM                 +D +  E   +G     +E
Sbjct: 72   EVKPKIETAPKTEPSVSNNGHVKMEIDGKVEVRALPKVNDPMDEDKHEEEAEGGEEEEEE 131

Query: 897  DMIVREIDVFFTPSIDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSID 718
            DMIVREIDVFFTPSID+D++LYVMQYPLRP WRP+ELDE CEEVRVKP ++EV++DLSID
Sbjct: 132  DMIVREIDVFFTPSIDSDTQLYVMQYPLRPCWRPYELDEKCEEVRVKPQSTEVQVDLSID 191

Query: 717  VDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEF 538
             ++ NWD  + S+LN+ KQTL + +MP  TTGYAVGVL+GNKLHLNPIHAVVQLR S+E 
Sbjct: 192  -ETTNWDPAQASKLNLKKQTLSSSFMPSCTTGYAVGVLIGNKLHLNPIHAVVQLRPSLEH 250

Query: 537  LKSCGSKWKNNVAGEI--SVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
            + S   K +N  +  I  +VK+ DS++ K +G SKKQ KR   + +Q S+ E
Sbjct: 251  VNSNDLKRRNIASFNIDPTVKIGDSSEGKPIGPSKKQIKRTEVANDQISDAE 302



 Score =  172 bits (435), Expect(2) = 1e-99
 Identities = 83/128 (64%), Positives = 102/128 (79%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           ++ W+ LKYHGSKSDFS+ YLQ+M+ EE SP+ FTM+PYDY++SLCP + +NN  SK  S
Sbjct: 302 EKSWISLKYHGSKSDFSSSYLQKMMAEEGSPMEFTMSPYDYMSSLCPVA-SNNAKSKGPS 360

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           RRFLLS+PLEER KKLL E  PVQRFS L HFAP+D VED+L V+ K+  LVQGLWAPR+
Sbjct: 361 RRFLLSLPLEERMKKLLIEGPPVQRFSVLKHFAPEDTVEDVLTVVQKHGQLVQGLWAPRT 420

Query: 29  FLLFNNDK 6
            LLF + K
Sbjct: 421 ALLFPDSK 428


>gb|KDO79497.1| hypothetical protein CISIN_1g0055732mg, partial [Citrus sinensis]
            gi|641860809|gb|KDO79498.1| hypothetical protein
            CISIN_1g0055732mg, partial [Citrus sinensis]
          Length = 265

 Score =  360 bits (923), Expect = 2e-96
 Identities = 191/257 (74%), Positives = 200/257 (77%)
 Frame = -3

Query: 1203 KVKPSQVPSRVSRFLXXXXXXXXXXXXXXXXXXPQQLEKPKTEVIIQRQPQTTVNLTTKT 1024
            K  PSQVPSRVSRFL                  PQQ +KPKTE   Q+   T+VNLT KT
Sbjct: 11   KATPSQVPSRVSRFLPKSSKLVPKPEPPPEKAEPQQPKKPKTEDNFQQT--TSVNLTPKT 68

Query: 1023 EPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDELHLQGDEDMIVREIDVFFTPSIDAD 844
            EPS+SNGDVK+                 VDLNMDELHLQ DEDMIVREIDVFFTPSIDAD
Sbjct: 69   EPSVSNGDVKLESKPVPEPETEPRKEEPVDLNMDELHLQDDEDMIVREIDVFFTPSIDAD 128

Query: 843  SKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKGSRLNMTK 664
            SKLYVMQYPLRP WRP+ELDE CEEVRVKPSTSEVEMDLSIDVDSNNWDSEK SRL+M K
Sbjct: 129  SKLYVMQYPLRPLWRPYELDERCEEVRVKPSTSEVEMDLSIDVDSNNWDSEKASRLSMPK 188

Query: 663  QTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQLRTSMEFLKSCGSKWKNNVAGEISV 484
            QTL T WMPPQ TGYA+GVL+GNKLHLNPIHAVVQLRTSM FLKS GSKWKNNVA EI V
Sbjct: 189  QTLSTTWMPPQATGYAIGVLIGNKLHLNPIHAVVQLRTSMGFLKSGGSKWKNNVASEIPV 248

Query: 483  KLEDSNQDKSVGSSKKQ 433
            KLEDSNQDKSVGSSKKQ
Sbjct: 249  KLEDSNQDKSVGSSKKQ 265


>ref|XP_008453719.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis melo]
          Length = 702

 Score =  224 bits (570), Expect(2) = 3e-93
 Identities = 113/237 (47%), Positives = 152/237 (64%)
 Frame = -3

Query: 1098 QLEKPKTEVIIQRQPQTTVNLTTKTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDE 919
            ++ +P  ++  +++    V +  K E SL NG  KM                   ++ D 
Sbjct: 57   EVVEPDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTM------VDDDP 110

Query: 918  LHLQGDEDMIVREIDVFFTPSIDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEV 739
            +     EDM+VREIDV FTPS+D++SKLYV+QYPLRPRWRP+E +  C+EVRVKPST EV
Sbjct: 111  MEEDASEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEV 170

Query: 738  EMDLSIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQ 559
            E+DL++D++SNN+DS+      M KQTL + W PP  T YAVG+L+GNKLHLNP+HAVVQ
Sbjct: 171  EIDLNVDIESNNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQ 230

Query: 558  LRTSMEFLKSCGSKWKNNVAGEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
            LR S E L S G K KNN+  +  VK E+     S G+S+KQ K+ G S E K+ +E
Sbjct: 231  LRPSFEHLNSGGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDE 287



 Score =  147 bits (372), Expect(2) = 3e-93
 Identities = 67/127 (52%), Positives = 92/127 (72%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           ++CW+PLKY+G +SD S R+LQ M+ +  SP+ F+M+P+DY++SLCPG+  ++   K  S
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPS 346

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           +++LLS+ LEER KKLL E  PVQRFSAL H+APD   E+ L  L +YA LVQGLW P+S
Sbjct: 347 KKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKS 406

Query: 29  FLLFNND 9
             L   D
Sbjct: 407 LFLIPQD 413


>ref|XP_008453720.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X2
            [Cucumis melo]
          Length = 569

 Score =  224 bits (570), Expect(2) = 3e-93
 Identities = 113/237 (47%), Positives = 152/237 (64%)
 Frame = -3

Query: 1098 QLEKPKTEVIIQRQPQTTVNLTTKTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDE 919
            ++ +P  ++  +++    V +  K E SL NG  KM                   ++ D 
Sbjct: 57   EVVEPDAQIGEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDTM------VDDDP 110

Query: 918  LHLQGDEDMIVREIDVFFTPSIDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEV 739
            +     EDM+VREIDV FTPS+D++SKLYV+QYPLRPRWRP+E +  C+EVRVKPST EV
Sbjct: 111  MEEDASEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEV 170

Query: 738  EMDLSIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQ 559
            E+DL++D++SNN+DS+      M KQTL + W PP  T YAVG+L+GNKLHLNP+HAVVQ
Sbjct: 171  EIDLNVDIESNNYDSKADDTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQ 230

Query: 558  LRTSMEFLKSCGSKWKNNVAGEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
            LR S E L S G K KNN+  +  VK E+     S G+S+KQ K+ G S E K+ +E
Sbjct: 231  LRPSFEHLNSGGPKRKNNIRADSDVKSEEHVDVNSAGASRKQKKQTGPSTELKTRDE 287



 Score =  147 bits (372), Expect(2) = 3e-93
 Identities = 67/127 (52%), Positives = 92/127 (72%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           ++CW+PLKY+G +SD S R+LQ M+ +  SP+ F+M+P+DY++SLCPG+  ++   K  S
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSSNKPKGPS 346

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           +++LLS+ LEER KKLL E  PVQRFSAL H+APD   E+ L  L +YA LVQGLW P+S
Sbjct: 347 KKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYEAEEFLEALQQYAQLVQGLWVPKS 406

Query: 29  FLLFNND 9
             L   D
Sbjct: 407 LFLIPQD 413


>ref|XP_004149158.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 isoform X1
            [Cucumis sativus] gi|700198105|gb|KGN53263.1|
            hypothetical protein Csa_4G038800 [Cucumis sativus]
          Length = 702

 Score =  223 bits (568), Expect(2) = 1e-92
 Identities = 114/237 (48%), Positives = 151/237 (63%)
 Frame = -3

Query: 1098 QLEKPKTEVIIQRQPQTTVNLTTKTEPSLSNGDVKMXXXXXXXXXXXXXXXXXVDLNMDE 919
            ++ +P   V  +++    V +  K E SL NG  KM                   ++ D 
Sbjct: 57   EVVEPDARVEEKKEDGEEVEVKPKVESSLPNGVAKMDVETKSEVEEDAM------VDDDP 110

Query: 918  LHLQGDEDMIVREIDVFFTPSIDADSKLYVMQYPLRPRWRPFELDESCEEVRVKPSTSEV 739
            +     EDM+VREIDV FTPS+D++SKLYV+QYPLRPRWRP+E +  C+EVRVKPST EV
Sbjct: 111  IEEDASEDMVVREIDVLFTPSVDSNSKLYVLQYPLRPRWRPYEFEGRCDEVRVKPSTGEV 170

Query: 738  EMDLSIDVDSNNWDSEKGSRLNMTKQTLFTRWMPPQTTGYAVGVLVGNKLHLNPIHAVVQ 559
            E+DL++D++SNN+D++      M KQTL + W PP  T YAVG+L+GNKLHLNP+HAVVQ
Sbjct: 171  EVDLNVDIESNNYDNKADGTFQMKKQTLTSSWQPPLATSYAVGLLMGNKLHLNPVHAVVQ 230

Query: 558  LRTSMEFLKSCGSKWKNNVAGEISVKLEDSNQDKSVGSSKKQNKRMGSSVEQKSNEE 388
            LR S E L S G K KNNV  +  VK E+     S G+S+KQ K+ G S E K+ +E
Sbjct: 231  LRPSFEHLNSGGPKRKNNVRADSDVKSEEHVDVNSAGASRKQKKQTGPSTEVKTRDE 287



 Score =  146 bits (369), Expect(2) = 1e-92
 Identities = 66/127 (51%), Positives = 91/127 (71%)
 Frame = -1

Query: 389 KQCWVPLKYHGSKSDFSARYLQRMLMEENSPIHFTMNPYDYVNSLCPGSGNNNTTSKCRS 210
           ++CW+PLKY+G +SD S R+LQ M+ +  SP+ F+M+P+DY++SLCPG+  +    K  S
Sbjct: 287 EECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGPS 346

Query: 209 RRFLLSVPLEERFKKLLCEAEPVQRFSALMHFAPDDNVEDILGVLHKYALLVQGLWAPRS 30
           +++LLS+ LEER KKLL E  PVQRFSAL H+APD   E+ +  L +YA LVQGLW P+S
Sbjct: 347 KKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPKS 406

Query: 29  FLLFNND 9
             L   D
Sbjct: 407 LFLIPQD 413