BLASTX nr result
ID: Zanthoxylum22_contig00019608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00019608
(653 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citr... 268 3e-69
ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II su... 265 2e-68
ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II su... 265 2e-68
ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Popu... 265 2e-68
ref|XP_007134240.1| hypothetical protein PHAVU_010G030200g [Phas... 264 3e-68
ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su... 264 4e-68
ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isofor... 263 5e-68
gb|KHN38608.1| DNA-directed RNA polymerase II subunit RPB4 [Glyc... 263 9e-68
ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527... 263 9e-68
gb|AFK35928.1| unknown [Lotus japonicus] 263 9e-68
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin... 262 1e-67
ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II su... 262 1e-67
ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II su... 261 2e-67
ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycin... 261 3e-67
ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II su... 261 3e-67
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri... 260 6e-67
ref|XP_003626907.1| RNA polymerase II, Rpb4, core protein [Medic... 259 7e-67
ref|XP_010520027.1| PREDICTED: DNA-directed RNA polymerase II su... 259 1e-66
ref|XP_010027764.1| PREDICTED: DNA-directed RNA polymerase II su... 259 1e-66
ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II su... 258 2e-66
>ref|XP_006428010.1| hypothetical protein CICLE_v10026735mg [Citrus clementina]
gi|568884040|ref|XP_006494738.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4-like isoform X2 [Citrus
sinensis] gi|557530000|gb|ESR41250.1| hypothetical
protein CICLE_v10026735mg [Citrus clementina]
Length = 138
Score = 268 bits (684), Expect = 3e-69
Identities = 134/138 (97%), Positives = 137/138 (99%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEVA+IL+ KYEQLQQTSDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAIILDHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_012089384.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Jatropha
curcas]
Length = 138
Score = 265 bits (677), Expect = 2e-68
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENA+ELKIG+EFLKAKCLMNCEVALILE KYEQLQQ SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_012487157.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|823248799|ref|XP_012457051.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Gossypium
raimondii] gi|763770918|gb|KJB38133.1| hypothetical
protein B456_006G238100 [Gossypium raimondii]
gi|763804330|gb|KJB71268.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
gi|763804331|gb|KJB71269.1| hypothetical protein
B456_011G113800 [Gossypium raimondii]
Length = 138
Score = 265 bits (677), Expect = 2e-68
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIGEEFLKAKCLMNCEVALILE KYEQLQQ SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
D+AIE+MLNDLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138
>ref|XP_002307132.1| hypothetical protein POPTR_0005s08690g [Populus trichocarpa]
gi|224096326|ref|XP_002310604.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|743823365|ref|XP_011021942.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743823373|ref|XP_011021944.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|743837931|ref|XP_011025594.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Populus euphratica]
gi|222853507|gb|EEE91054.1| hypothetical protein
POPTR_0007s06660g [Populus trichocarpa]
gi|222856581|gb|EEE94128.1| hypothetical protein
POPTR_0005s08690g [Populus trichocarpa]
Length = 138
Score = 265 bits (677), Expect = 2e-68
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG++FLKAKCLMNCEVALILE KYEQLQQ SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_007134240.1| hypothetical protein PHAVU_010G030200g [Phaseolus vulgaris]
gi|951033503|ref|XP_014515734.1| PREDICTED: DNA-directed
RNA polymerase II subunit 4 [Vigna radiata var. radiata]
gi|561007285|gb|ESW06234.1| hypothetical protein
PHAVU_010G030200g [Phaseolus vulgaris]
gi|920719236|gb|KOM58433.1| hypothetical protein
LR48_Vigan11g146700 [Vigna angularis]
Length = 138
Score = 264 bits (675), Expect = 3e-68
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQTSDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|731409111|ref|XP_010657077.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Vitis
vinifera] gi|147856183|emb|CAN80281.1| hypothetical
protein VITISV_017448 [Vitis vinifera]
gi|302143481|emb|CBI22042.3| unnamed protein product
[Vitis vinifera]
Length = 138
Score = 264 bits (674), Expect = 4e-68
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEVA+ILE KYEQLQQ SDDP+NQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_007048135.1| RNA polymerase II, Rpb4, core protein isoform 1 [Theobroma cacao]
gi|590707933|ref|XP_007048136.1| RNA polymerase II,
Rpb4, core protein isoform 1 [Theobroma cacao]
gi|508700396|gb|EOX92292.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
gi|508700397|gb|EOX92293.1| RNA polymerase II, Rpb4,
core protein isoform 1 [Theobroma cacao]
Length = 138
Score = 263 bits (673), Expect = 5e-68
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIGEEFLKAKCLMNCEVALILE KYEQLQQ S+DPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILEHKYEQLQQMSEDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
D+AIE+MLNDLSLIKKFE
Sbjct: 121 DDAIERMLNDLSLIKKFE 138
>gb|KHN38608.1| DNA-directed RNA polymerase II subunit RPB4 [Glycine soja]
gi|947117934|gb|KRH66183.1| hypothetical protein
GLYMA_03G088500 [Glycine max]
Length = 138
Score = 263 bits (671), Expect = 9e-68
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQTSDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_006579388.1| PREDICTED: uncharacterized protein LOC100527704 isoform X1 [Glycine
max] gi|734406707|gb|KHN34054.1| DNA-directed RNA
polymerase II subunit RPB4 [Glycine soja]
gi|947111213|gb|KRH59539.1| hypothetical protein
GLYMA_05G189100 [Glycine max]
Length = 138
Score = 263 bits (671), Expect = 9e-68
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEVALILE KYEQLQQTSDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RY+LAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYELAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>gb|AFK35928.1| unknown [Lotus japonicus]
Length = 138
Score = 263 bits (671), Expect = 9e-68
Identities = 132/138 (95%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQ+SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
gi|255625623|gb|ACU13156.1| unknown [Glycine max]
gi|734404903|gb|KHN33191.1| DNA-directed RNA polymerase
II subunit RPB4 [Glycine soja]
gi|947057978|gb|KRH07384.1| hypothetical protein
GLYMA_16G084800 [Glycine max]
Length = 138
Score = 262 bits (670), Expect = 1e-67
Identities = 131/138 (94%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQTSDDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_011088997.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum] gi|747083277|ref|XP_011088998.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Sesamum
indicum]
Length = 138
Score = 262 bits (669), Expect = 1e-67
Identities = 132/138 (95%), Positives = 135/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKI +EFLKAKCLMNCEVALILE KYEQLQQ +DDPMNQ+SQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIPDEFLKAKCLMNCEVALILEHKYEQLQQMADDPMNQMSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_004509486.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Cicer
arietinum] gi|502155876|ref|XP_004510223.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Cicer
arietinum]
Length = 138
Score = 261 bits (668), Expect = 2e-67
Identities = 131/138 (94%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LIL+ KYEQLQQ+SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILDHKYEQLQQSSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|NP_001238073.1| uncharacterized protein LOC100527316 [Glycine max]
gi|255632071|gb|ACU16388.1| unknown [Glycine max]
Length = 138
Score = 261 bits (667), Expect = 3e-67
Identities = 131/138 (94%), Positives = 136/138 (98%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQTSDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIA+VPSIK+RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAVVPSIKSRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_010261089.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 isoform X1
[Nelumbo nucifera]
Length = 138
Score = 261 bits (666), Expect = 3e-67
Identities = 131/138 (94%), Positives = 134/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEVALIL+RKYEQLQQ SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILDRKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGR HD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRMHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
D+ IEKML DLSLIKKFE
Sbjct: 121 DDQIEKMLTDLSLIKKFE 138
>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
II, putative [Ricinus communis]
Length = 138
Score = 260 bits (664), Expect = 6e-67
Identities = 130/138 (94%), Positives = 135/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENA+ELKIG+EFLKAKCLMNCEVALILE KYEQLQQ S+DPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKML DLS+IKKFE
Sbjct: 121 DEAIEKMLTDLSMIKKFE 138
>ref|XP_003626907.1| RNA polymerase II, Rpb4, core protein [Medicago truncatula]
gi|355520929|gb|AET01383.1| RNA polymerase II, Rpb4,
core protein [Medicago truncatula]
gi|388497296|gb|AFK36714.1| unknown [Medicago
truncatula]
Length = 138
Score = 259 bits (663), Expect = 7e-67
Identities = 131/138 (94%), Positives = 135/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQ+SDD MNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDAMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138
>ref|XP_010520027.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Tarenaya
hassleriana]
Length = 138
Score = 259 bits (662), Expect = 1e-66
Identities = 128/138 (92%), Positives = 134/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEVALILE KYEQLQQ S+DPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVALILEHKYEQLQQISEDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQL EFELCVLGNLCPETVEEA+AMVPS+KT+GR HD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLTEFELCVLGNLCPETVEEAVAMVPSLKTKGRVHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138
>ref|XP_010027764.1| PREDICTED: DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|702459506|ref|XP_010027765.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|702459510|ref|XP_010027766.1| PREDICTED:
DNA-directed RNA polymerase II subunit 4 [Eucalyptus
grandis] gi|629088105|gb|KCW54358.1| hypothetical
protein EUGRSUZ_I00318 [Eucalyptus grandis]
gi|629088106|gb|KCW54359.1| hypothetical protein
EUGRSUZ_I00318 [Eucalyptus grandis]
Length = 138
Score = 259 bits (661), Expect = 1e-66
Identities = 131/138 (94%), Positives = 134/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MSGEEEENAAELKIG+EFLKAKCLMNCEV+LILE KYEQLQQ SDDPMNQVSQVFEKSLQ
Sbjct: 1 MSGEEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQMSDDPMNQVSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIK RGRA D
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKNRGRALD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIK+FE
Sbjct: 121 DEAIEKMLNDLSLIKRFE 138
>ref|XP_011090278.1| PREDICTED: DNA-directed RNA polymerase II subunit 4-like [Sesamum
indicum]
Length = 138
Score = 258 bits (660), Expect = 2e-66
Identities = 131/138 (94%), Positives = 134/138 (97%)
Frame = -2
Query: 646 MSGEEEENAAELKIGEEFLKAKCLMNCEVALILERKYEQLQQTSDDPMNQVSQVFEKSLQ 467
MS EEEENAAELKI +EFLKAKCLMNCEVALILE KYEQLQQ +DDPMNQ+SQVFEKSLQ
Sbjct: 1 MSVEEEENAAELKIPDEFLKAKCLMNCEVALILEHKYEQLQQMADDPMNQMSQVFEKSLQ 60
Query: 466 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 287
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD
Sbjct: 61 YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD 120
Query: 286 DEAIEKMLNDLSLIKKFE 233
DEAIEKMLNDLSLIKKFE
Sbjct: 121 DEAIEKMLNDLSLIKKFE 138