BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00019001
         (574 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO46564.1| hypothetical protein CISIN_1g0010921mg, partial [...   332   8e-89
ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citr...   332   8e-89
ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III s...   330   2e-88
ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III s...   330   2e-88
ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III s...   297   3e-78
ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theob...   293   3e-77
ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theob...   293   3e-77
ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theob...   293   3e-77
ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theob...   293   3e-77
ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theob...   293   3e-77
ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, par...   293   5e-77
ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, par...   290   5e-76
ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III s...   288   1e-75
ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III s...   285   9e-75
ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III s...   285   1e-74
gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium r...   285   1e-74
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...   281   1e-73
ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theob...   280   4e-73
ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theob...   280   4e-73
ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III s...   278   1e-72

>gb|KDO46564.1| hypothetical protein CISIN_1g0010921mg, partial [Citrus sinensis]
           gi|641827380|gb|KDO46565.1| hypothetical protein
           CISIN_1g0010921mg, partial [Citrus sinensis]
           gi|641827381|gb|KDO46566.1| hypothetical protein
           CISIN_1g0010921mg, partial [Citrus sinensis]
           gi|641827382|gb|KDO46567.1| hypothetical protein
           CISIN_1g0010921mg, partial [Citrus sinensis]
           gi|641827383|gb|KDO46568.1| hypothetical protein
           CISIN_1g0010921mg, partial [Citrus sinensis]
          Length = 361

 Score =  332 bits (851), Expect = 8e-89
 Identities = 170/191 (89%), Positives = 174/191 (91%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK
Sbjct: 135 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NRVIIDTDKKGN+NA             VIQMEK KMYLLLNQF KKIPIMVVMKAMGME
Sbjct: 195 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGME 254

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQ+KALEYLEGKVKRSTFGSPPN +EGR
Sbjct: 255 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGR 314

Query: 33  ALAILRDVFLA 1
           A +ILRDVFLA
Sbjct: 315 AFSILRDVFLA 325


>ref|XP_006432385.1| hypothetical protein CICLE_v10000078mg [Citrus clementina]
           gi|557534507|gb|ESR45625.1| hypothetical protein
           CICLE_v10000078mg [Citrus clementina]
          Length = 1149

 Score =  332 bits (851), Expect = 8e-89
 Identities = 170/191 (89%), Positives = 174/191 (91%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK
Sbjct: 135 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NRVIIDTDKKGN+NA             VIQMEK KMYLLLNQF KKIPIMVVMKAMGME
Sbjct: 195 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGME 254

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQ+KALEYLEGKVKRSTFGSPPN +EGR
Sbjct: 255 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGR 314

Query: 33  ALAILRDVFLA 1
           A +ILRDVFLA
Sbjct: 315 AFSILRDVFLA 325


>ref|XP_006494574.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X3 [Citrus sinensis]
          Length = 1058

 Score =  330 bits (847), Expect = 2e-88
 Identities = 169/191 (88%), Positives = 174/191 (91%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK
Sbjct: 44  EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 103

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NRVIIDTDKKGN+NA             VIQMEK KMYLLLNQF KKIPIMVVMKAMG+E
Sbjct: 104 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIE 163

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQ+KALEYLEGKVKRSTFGSPPN +EGR
Sbjct: 164 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGR 223

Query: 33  ALAILRDVFLA 1
           A +ILRDVFLA
Sbjct: 224 AFSILRDVFLA 234


>ref|XP_006494572.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like
           isoform X1 [Citrus sinensis]
           gi|568883651|ref|XP_006494573.1| PREDICTED: DNA-directed
           RNA polymerase III subunit RPC2-like isoform X2 [Citrus
           sinensis]
          Length = 1149

 Score =  330 bits (847), Expect = 2e-88
 Identities = 169/191 (88%), Positives = 174/191 (91%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK
Sbjct: 135 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 194

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NRVIIDTDKKGN+NA             VIQMEK KMYLLLNQF KKIPIMVVMKAMG+E
Sbjct: 195 NRVIIDTDKKGNINASVTSSTETVKSKTVIQMEKGKMYLLLNQFVKKIPIMVVMKAMGIE 254

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQ+KALEYLEGKVKRSTFGSPPN +EGR
Sbjct: 255 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQEKALEYLEGKVKRSTFGSPPNDREGR 314

Query: 33  ALAILRDVFLA 1
           A +ILRDVFLA
Sbjct: 315 AFSILRDVFLA 325


>ref|XP_012068721.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Jatropha
           curcas] gi|643733723|gb|KDP40566.1| hypothetical protein
           JCGZ_24565 [Jatropha curcas]
          Length = 1152

 Score =  297 bits (760), Expect = 3e-78
 Identities = 154/191 (80%), Positives = 164/191 (85%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGR+PIMLRS  CVLYGKDEAELARLGECPLDPGGYFIIKGTEKV+LIQEQLSK
Sbjct: 141 EKNDVVIGRMPIMLRSRGCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVILIQEQLSK 200

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             +IQMEKEKMYL LNQFAKKIPIMVVMKAMGME
Sbjct: 201 NRIIIDNDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFAKKIPIMVVMKAMGME 260

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQM+GRDPRYSALLLPSIEECA+L+IYTQ KALEYLEGKVK  T+ S    +E R
Sbjct: 261 SDQEVVQMLGRDPRYSALLLPSIEECASLNIYTQQKALEYLEGKVKMPTYFSSSYVKENR 320

Query: 33  ALAILRDVFLA 1
           AL ILRDVFLA
Sbjct: 321 ALGILRDVFLA 331


>ref|XP_007010805.1| DNA-directed RNA polymerase isoform 7 [Theobroma cacao]
           gi|508727718|gb|EOY19615.1| DNA-directed RNA polymerase
           isoform 7 [Theobroma cacao]
          Length = 1082

 Score =  293 bits (751), Expect = 3e-77
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EKV+LIQEQLSK
Sbjct: 44  EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 103

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 104 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 163

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 164 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 223

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 224 ALSILRDVFLA 234


>ref|XP_007010804.1| DNA-directed RNA polymerase isoform 6 [Theobroma cacao]
           gi|508727717|gb|EOY19614.1| DNA-directed RNA polymerase
           isoform 6 [Theobroma cacao]
          Length = 1034

 Score =  293 bits (751), Expect = 3e-77
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EKV+LIQEQLSK
Sbjct: 143 EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 202

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 203 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 262

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 263 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 322

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 323 ALSILRDVFLA 333


>ref|XP_007010802.1| DNA-directed RNA polymerase isoform 4 [Theobroma cacao]
           gi|508727715|gb|EOY19612.1| DNA-directed RNA polymerase
           isoform 4 [Theobroma cacao]
          Length = 1034

 Score =  293 bits (751), Expect = 3e-77
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EKV+LIQEQLSK
Sbjct: 143 EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 202

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 203 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 262

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 263 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 322

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 323 ALSILRDVFLA 333


>ref|XP_007010800.1| DNA-directed RNA polymerase isoform 2 [Theobroma cacao]
           gi|508727713|gb|EOY19610.1| DNA-directed RNA polymerase
           isoform 2 [Theobroma cacao]
          Length = 1011

 Score =  293 bits (751), Expect = 3e-77
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EKV+LIQEQLSK
Sbjct: 143 EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 202

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 203 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 262

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 263 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 322

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 323 ALSILRDVFLA 333


>ref|XP_007010799.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
           gi|508727712|gb|EOY19609.1| DNA-directed RNA polymerase
           isoform 1 [Theobroma cacao]
          Length = 1158

 Score =  293 bits (751), Expect = 3e-77
 Identities = 148/191 (77%), Positives = 164/191 (85%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EKV+LIQEQLSK
Sbjct: 143 EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEKVILIQEQLSK 202

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 203 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 262

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 263 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 322

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 323 ALSILRDVFLA 333


>ref|XP_002321356.2| hypothetical protein POPTR_0015s005302g, partial [Populus
           trichocarpa] gi|550321670|gb|EEF05483.2| hypothetical
           protein POPTR_0015s005302g, partial [Populus
           trichocarpa]
          Length = 1034

 Score =  293 bits (749), Expect = 5e-77
 Identities = 149/190 (78%), Positives = 162/190 (85%)
 Frame = -2

Query: 570 KNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 391
           KNDVVIGR+PIMLRSC CVLYGK+EAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 140 KNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 199

Query: 390 RVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGMES 211
           R+IID DKKGN+NA             VI MEKEKMYL LNQFAKKIPIMVVMKAMGMES
Sbjct: 200 RIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMES 259

Query: 210 DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGRA 31
           DQEVVQMVGRDPRYSALLLPSIEECA+  +YTQ +ALEYLE  VKRST+ S    +E RA
Sbjct: 260 DQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENRA 319

Query: 30  LAILRDVFLA 1
           LAILRDVF+A
Sbjct: 320 LAILRDVFIA 329


>ref|XP_002321360.2| hypothetical protein POPTR_0015s005302g, partial [Populus
           trichocarpa] gi|550321669|gb|EEF05487.2| hypothetical
           protein POPTR_0015s005302g, partial [Populus
           trichocarpa]
          Length = 1035

 Score =  290 bits (741), Expect = 5e-76
 Identities = 150/191 (78%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
 Frame = -2

Query: 570 KNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 391
           KNDVVIGR+PIMLRSC CVLYGK+EAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 140 KNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 199

Query: 390 RVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGMES 211
           R+IID DKKGN+NA             VI MEKEKMYL LNQFAKKIPIMVVMKAMGMES
Sbjct: 200 RIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMES 259

Query: 210 DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTF-GSPPNSQEGR 34
           DQEVVQMVGRDPRYSALLLPSIEECA+  +YTQ +ALEYLE  VKRST+  S    QE R
Sbjct: 260 DQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKQENR 319

Query: 33  ALAILRDVFLA 1
           ALAILRDVF+A
Sbjct: 320 ALAILRDVFIA 330


>ref|XP_011003287.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X2
           [Populus euphratica]
          Length = 1150

 Score =  288 bits (738), Expect = 1e-75
 Identities = 147/190 (77%), Positives = 162/190 (85%)
 Frame = -2

Query: 570 KNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 391
           KNDVVIGR+PIMLRSC CVL GK+EAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 140 KNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 199

Query: 390 RVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGMES 211
           R+IID DKKGN+NA             VI MEKEKMYL LNQFAKKIPIMVVMKAMGMES
Sbjct: 200 RIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMES 259

Query: 210 DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGRA 31
           DQEVVQMVGRDPRYSALLLPSIEECA+  +YT+++ALEYLE  VKRST+ S    +E RA
Sbjct: 260 DQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKENRA 319

Query: 30  LAILRDVFLA 1
           LAILRDVF+A
Sbjct: 320 LAILRDVFIA 329


>ref|XP_011003286.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 isoform X1
           [Populus euphratica]
          Length = 1151

 Score =  285 bits (730), Expect = 9e-75
 Identities = 148/191 (77%), Positives = 162/191 (84%), Gaps = 1/191 (0%)
 Frame = -2

Query: 570 KNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSKN 391
           KNDVVIGR+PIMLRSC CVL GK+EAELARLGECPLDPGGYF++KGTEKV+LIQEQLSKN
Sbjct: 140 KNDVVIGRMPIMLRSCCCVLSGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSKN 199

Query: 390 RVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGMES 211
           R+IID DKKGN+NA             VI MEKEKMYL LNQFAKKIPIMVVMKAMGMES
Sbjct: 200 RIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGMES 259

Query: 210 DQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTF-GSPPNSQEGR 34
           DQEVVQMVGRDPRYSALLLPSIEECA+  +YT+++ALEYLE  VKRST+  S    QE R
Sbjct: 260 DQEVVQMVGRDPRYSALLLPSIEECASHGVYTREQALEYLEAMVKRSTYSSSSTEKQENR 319

Query: 33  ALAILRDVFLA 1
           ALAILRDVF+A
Sbjct: 320 ALAILRDVFIA 330


>ref|XP_012459628.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Gossypium
           raimondii] gi|763808128|gb|KJB75030.1| hypothetical
           protein B456_012G019600 [Gossypium raimondii]
          Length = 1158

 Score =  285 bits (729), Expect = 1e-74
 Identities = 143/191 (74%), Positives = 161/191 (84%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVL GKDEAELARLGECPLDPGGYF+IKGTEKV+LIQEQLSK
Sbjct: 142 EKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 201

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 202 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 261

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQM+GRDPR+SALLLPSIEECA + IYT+++AL YL+ K KR  + S  + Q+GR
Sbjct: 262 SDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSASDQDGR 321

Query: 33  ALAILRDVFLA 1
           A  ILRDVF+A
Sbjct: 322 AFCILRDVFIA 332


>gb|KJB75029.1| hypothetical protein B456_012G019600 [Gossypium raimondii]
          Length = 1159

 Score =  285 bits (729), Expect = 1e-74
 Identities = 143/191 (74%), Positives = 161/191 (84%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVL GKDEAELARLGECPLDPGGYF+IKGTEKV+LIQEQLSK
Sbjct: 142 EKNDLVIGRMPIMLRSCCCVLQGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 201

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 202 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 261

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQM+GRDPR+SALLLPSIEECA + IYT+++AL YL+ K KR  + S  + Q+GR
Sbjct: 262 SDQEVVQMLGRDPRFSALLLPSIEECAGIGIYTKEQALAYLDTKAKRPLYASSASDQDGR 321

Query: 33  ALAILRDVFLA 1
           A  ILRDVF+A
Sbjct: 322 AFCILRDVFIA 332


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus
           communis] gi|223535120|gb|EEF36800.1| DNA-directed RNA
           polymerase III subunit, putative [Ricinus communis]
          Length = 1139

 Score =  281 bits (720), Expect = 1e-73
 Identities = 148/191 (77%), Positives = 156/191 (81%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGR+PIMLRS  CVLYGKDEAELARLGECPLDPGGYF+IKGTEKV+LIQEQLSK
Sbjct: 141 EKNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSK 200

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IIDTDKKGN+NA             +IQMEKEKMYL LNQF KKIPIMVV+KAMGME
Sbjct: 201 NRIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGME 260

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDPRYSALLLPSIEECA L IYTQ KALEYL+GK             E R
Sbjct: 261 SDQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK-------------ENR 307

Query: 33  ALAILRDVFLA 1
           AL ILRDVFLA
Sbjct: 308 ALTILRDVFLA 318


>ref|XP_007010803.1| DNA-directed RNA polymerase isoform 5 [Theobroma cacao]
           gi|508727716|gb|EOY19613.1| DNA-directed RNA polymerase
           isoform 5 [Theobroma cacao]
          Length = 1006

 Score =  280 bits (716), Expect = 4e-73
 Identities = 144/191 (75%), Positives = 159/191 (83%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EK     EQLSK
Sbjct: 143 EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEK-----EQLSK 197

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 198 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 257

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 258 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 317

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 318 ALSILRDVFLA 328


>ref|XP_007010801.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
           gi|508727714|gb|EOY19611.1| DNA-directed RNA polymerase
           isoform 3 [Theobroma cacao]
          Length = 1153

 Score =  280 bits (716), Expect = 4e-73
 Identities = 144/191 (75%), Positives = 159/191 (83%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKND+VIGR+PIMLRSC CVLYGKDEAELARLGECPLDPGGYF+IKG EK     EQLSK
Sbjct: 143 EKNDLVIGRMPIMLRSCCCVLYGKDEAELARLGECPLDPGGYFVIKGAEK-----EQLSK 197

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IID DKKGN+NA             VIQMEKEK+YLLLNQF KKIPIMVVMKAMGME
Sbjct: 198 NRIIIDADKKGNINASVTSSSEATKSKTVIQMEKEKIYLLLNQFVKKIPIMVVMKAMGME 257

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGRDP Y+A+LLPSIEECA + IYTQ++ALEYLE KVKR  +  P + +EGR
Sbjct: 258 SDQEVVQMVGRDPHYNAVLLPSIEECAGVGIYTQEQALEYLETKVKRVMYTGPASEKEGR 317

Query: 33  ALAILRDVFLA 1
           AL+ILRDVFLA
Sbjct: 318 ALSILRDVFLA 328


>ref|XP_010659064.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera] gi|731414225|ref|XP_010659065.1| PREDICTED:
           DNA-directed RNA polymerase III subunit RPC2 [Vitis
           vinifera]
          Length = 1157

 Score =  278 bits (712), Expect = 1e-72
 Identities = 141/191 (73%), Positives = 160/191 (83%)
 Frame = -2

Query: 573 EKNDVVIGRIPIMLRSCRCVLYGKDEAELARLGECPLDPGGYFIIKGTEKVLLIQEQLSK 394
           EKNDVVIGR+PIMLRSC CVLY KDEAELARLGECPLDPGGYF++KGTEKV+LIQEQLSK
Sbjct: 143 EKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 202

Query: 393 NRVIIDTDKKGNVNAXXXXXXXXXXXXXVIQMEKEKMYLLLNQFAKKIPIMVVMKAMGME 214
           NR+IIDTDKKGN+NA             VI MEKEK++L LNQF  KIPIM+VMKAMGME
Sbjct: 203 NRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMGME 262

Query: 213 SDQEVVQMVGRDPRYSALLLPSIEECANLDIYTQDKALEYLEGKVKRSTFGSPPNSQEGR 34
           SDQEVVQMVGR+PRYSALLLPS+EECA+  IYTQ +ALE+LE KVK+  F +P   +EGR
Sbjct: 263 SDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKEGR 322

Query: 33  ALAILRDVFLA 1
            +AILRD F+A
Sbjct: 323 GMAILRDTFIA 333