BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00018535
         (1903 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sin...  1160   0.0  
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1160   0.0  
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1160   0.0  
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...  1087   0.0  
ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1074   0.0  
ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1072   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1070   0.0  
ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1068   0.0  
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...  1064   0.0  
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...  1061   0.0  
ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 is...  1059   0.0  
ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 is...  1059   0.0  
ref|XP_010101266.1| RNA-dependent RNA polymerase 6 [Morus notabi...  1058   0.0  
ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1058   0.0  
emb|CBI21038.3| unnamed protein product [Vitis vinifera]             1040   0.0  
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1040   0.0  
gb|KHG28504.1| RNA-dependent RNA polymerase 6 -like protein [Gos...  1038   0.0  
ref|XP_010531141.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1037   0.0  
ref|XP_010531140.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1037   0.0  
ref|XP_012442341.1| PREDICTED: RNA-dependent RNA polymerase 6 [G...  1033   0.0  

>gb|KDO61726.1| hypothetical protein CISIN_1g041430mg [Citrus sinensis]
          Length = 1197

 Score = 1160 bits (3002), Expect = 0.0
 Identities = 565/634 (89%), Positives = 594/634 (93%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +DSFFDLLR Q REVNVAALKHIYSYK PVFDA KRLK+VQEWLLK+P+LYK PKQ+DDI
Sbjct: 351  SDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VE+RRL ITPTKAYCLPPEVELSNRVLRKYKD+ADRFLRVTFMDEGLQTMNANVLSY+IA
Sbjct: 411  VEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDIT NSFSQKTRVFKRV+S+LS GFYLCGRK+SFLAFSS+QLRD SAWFF+EDGKT
Sbjct: 471  PIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKT 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL+IK WMGRFTD+NIAKCAARMGQCFSSTYATVEVP TEVDPELPDIKR+ Y FSDGI
Sbjct: 531  SVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKITPDLAMEVAQKLKLDV+PPPCAYQIRYAG KGVVA WP K DGIRMSLRESMNKFQS
Sbjct: 591  GKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQS 650

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNVPDE FW+MQ SM+SKLNQMLVDSDVAFE+
Sbjct: 651  HHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEV 710

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTAACAEQGNTAAIMLSAGF PQTEPHLRGMLTCIRAAQLWGLREKARIFVP+GRWLMGC
Sbjct: 711  LTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGC 770

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKKLQVIKGFVVIGKNPCLHPGDIRI 464
            LDELGVLE GQCFIQVSEP L NCFSKHGSRF ETKKLQVIKGFVVI KNPCLHPGDIRI
Sbjct: 771  LDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAETKKLQVIKGFVVIAKNPCLHPGDIRI 830

Query: 463  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPME 284
            LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPP KKSWPPME
Sbjct: 831  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPME 890

Query: 283  YTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAEL 104
            Y  A+A+ LTRPVD +DIIEFFA++MVNE+LG ICNAHVVHAD  EYGALDE C  LAEL
Sbjct: 891  YNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAEL 950

Query: 103  AATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            AATAVDFPKTGKIV MP+HLKPKLYPDFMGKE Y
Sbjct: 951  AATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAY 984


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score = 1160 bits (3002), Expect = 0.0
 Identities = 565/634 (89%), Positives = 594/634 (93%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +DSFFDLLR Q REVNVAALKHIYSYK PVFDA KRLK+VQEWLLK+P+LYK PKQ+DDI
Sbjct: 351  SDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VE+RRL ITPTKAYCLPPEVELSNRVLRKYKD+ADRFLRVTFMDEGLQTMNANVLSY+IA
Sbjct: 411  VEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDIT NSFSQKTRVFKRV+S+LS GFYLCGRK+SFLAFSS+QLRD SAWFF+EDGKT
Sbjct: 471  PIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKT 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL+IK WMGRFTD+NIAKCAARMGQCFSSTYATVEVP TEVDPELPDIKR+ Y FSDGI
Sbjct: 531  SVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKITPDLAMEVAQKLKLDV+PPPCAYQIRYAG KGVVA WP K DGIRMSLRESMNKFQS
Sbjct: 591  GKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQS 650

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNVPDE FW+MQ SM+SKLNQMLVDSDVAFE+
Sbjct: 651  HHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEV 710

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTAACAEQGNTAAIMLSAGF PQTEPHLRGMLTCIRAAQLWGLREKARIFVP+GRWLMGC
Sbjct: 711  LTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGC 770

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKKLQVIKGFVVIGKNPCLHPGDIRI 464
            LDELGVLE GQCFIQVSEP L NCFSKHGSRF ETKKLQVIKGFVVI KNPCLHPGDIRI
Sbjct: 771  LDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAETKKLQVIKGFVVIAKNPCLHPGDIRI 830

Query: 463  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPME 284
            LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPP KKSWPPME
Sbjct: 831  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPME 890

Query: 283  YTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAEL 104
            Y  A+A+ LTRPVD +DIIEFFA++MVNE+LG ICNAHVVHAD  EYGALDE C  LAEL
Sbjct: 891  YNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAEL 950

Query: 103  AATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            AATAVDFPKTGKIV MP+HLKPKLYPDFMGKE Y
Sbjct: 951  AATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAY 984


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score = 1160 bits (3002), Expect = 0.0
 Identities = 565/634 (89%), Positives = 594/634 (93%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +DSFFDLLR Q REVNVAALKHIYSYK PVFDA KRLK+VQEWLLK+P+LYK PKQ+DDI
Sbjct: 351  SDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPELYKGPKQIDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VE+RRL ITPTKAYCLPPEVELSNRVLRKYKD+ADRFLRVTFMDEGLQTMNANVLSY+IA
Sbjct: 411  VEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQTMNANVLSYFIA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDIT NSFSQKTRVFKRV+S+LS GFYLCGRK+SFLAFSS+QLRD SAWFF+EDGKT
Sbjct: 471  PIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDCSAWFFSEDGKT 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL+IK WMGRFTD+NIAKCAARMGQCFSSTYATVEVP TEVDPELPDIKR+ Y FSDGI
Sbjct: 531  SVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDIKRNGYVFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKITPDLAMEVAQKLKLDV+PPPCAYQIRYAG KGVVA WP K DGIRMSLRESMNKFQS
Sbjct: 591  GKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRMSLRESMNKFQS 650

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNVPDE FW+MQ SM+SKLNQMLVDSDVAFE+
Sbjct: 651  HHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQMLVDSDVAFEV 710

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTAACAEQGNTAAIMLSAGF PQTEPHLRGMLTCIRAAQLWGLREKARIFVP+GRWLMGC
Sbjct: 711  LTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARIFVPAGRWLMGC 770

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKKLQVIKGFVVIGKNPCLHPGDIRI 464
            LDELGVLE GQCFIQVSEP L NCFSKHGSRF ETKKLQVIKGFVVI KNPCLHPGDIRI
Sbjct: 771  LDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAETKKLQVIKGFVVIAKNPCLHPGDIRI 830

Query: 463  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPME 284
            LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPP KKSWPPME
Sbjct: 831  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKKSWPPME 890

Query: 283  YTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAEL 104
            Y  A+A+ LTRPVD +DIIEFFA++MVNE+LG ICNAHVVHAD  EYGALDE C  LAEL
Sbjct: 891  YNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYGALDENCILLAEL 950

Query: 103  AATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            AATAVDFPKTGKIV MP+HLKPKLYPDFMGKE Y
Sbjct: 951  AATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAY 984


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score = 1087 bits (2811), Expect = 0.0
 Identities = 525/635 (82%), Positives = 577/635 (90%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +DSFFDLLR+QP +VN+AAL+HI SYK PVFDA+KRLK VQ+WLLKNPKL++  KQ+DDI
Sbjct: 351  SDSFFDLLRNQPLDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNPKLFRSSKQLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VEIRRLAITPT+AYCLPPEVELSNRVLR+YKD+AD+FLRVTFMDEGLQTMNAN L+YY A
Sbjct: 411  VEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQTMNANTLTYYCA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDITSNSFSQKTR+FKRVKS+L+ GFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT
Sbjct: 471  PIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V +I+NWMG+FT+RNIAKCAARMGQCFSSTYATVEVP  E   +LPDI+R+ Y FSDGI
Sbjct: 531  SVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPDIERNNYIFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLKL+V+ PPCAYQIRYAG KGVVA WP   DGIR+SLR SMNKF S
Sbjct: 591  GMITPDLAKEVAEKLKLEVN-PPCAYQIRYAGCKGVVACWPAHIDGIRLSLRVSMNKFHS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TL+VPDE FW MQ  MVSKLNQM +D+DVAF++
Sbjct: 650  NHTTLEICSWTRFQPGFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQMFMDADVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            +TA+CAEQGNTAAIMLSAGF P+TEPHL GMLTCIRAAQLWGLREK RIFVPSGRWLMGC
Sbjct: 710  VTASCAEQGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRIFVPSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEET-KKLQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLE GQCFIQVS PSLE+CF KHGSRF E+ KKLQV+KG VV+ KNPCLHPGDIR
Sbjct: 770  LDELGVLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD PELHHL+DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPP K+SW PM
Sbjct: 830  ILEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+A+ L RPV+HQDII+FFA+NMVNE+LGAICNAHVVHAD  EYGALDE C  LAE
Sbjct: 890  QYDAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGK+V MP HLKPKLYPDFMGKEDY
Sbjct: 950  LAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDY 984


>ref|XP_011026450.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
          Length = 1200

 Score = 1074 bits (2777), Expect = 0.0
 Identities = 515/635 (81%), Positives = 576/635 (90%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++ FFDLLR+Q  EVNV+ALKHI +Y+RPVF+AYKRLK VQEWLLKNP L+K PKQ+ DI
Sbjct: 354  SNDFFDLLRNQHTEVNVSALKHICTYRRPVFNAYKRLKAVQEWLLKNPNLFKNPKQLGDI 413

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VEIRRL ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQ MN+NVL+YY+A
Sbjct: 414  VEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVA 473

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDITSNSF QKTR+FKRV+S+L+ GFYLCGR+YSFLAFS+NQLRD+SAWFFAE+   
Sbjct: 474  PIVRDITSNSFHQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFAEERNV 533

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL+IK+WMG+FT+RNIAKCAARMGQCFSSTYAT+EVP  EV+ +LPDI+R+ Y FSDGI
Sbjct: 534  SVLDIKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNFDLPDIERNGYVFSDGI 593

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLKLD+  PPCAYQIRYAG KGVVA WPGK DG+ +SLR SMNKFQS
Sbjct: 594  GIITPDLAREVAEKLKLDID-PPCAYQIRYAGCKGVVACWPGKGDGVHLSLRPSMNKFQS 652

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNVPD  FW MQ +MVSKLNQM V+SDVAF++
Sbjct: 653  NHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDV 712

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+CA+QGN AAIMLSAGFKPQ EPHLRGMLTC+RAAQLWGLREKARIFVPSGRWLMGC
Sbjct: 713  LTASCADQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGC 772

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELG+LEQGQCFIQVS  SLE CF KHG++F E KK LQV+KG VVI KNPCLHPGD+R
Sbjct: 773  LDELGMLEQGQCFIQVSNSSLEKCFIKHGAKFSEAKKNLQVVKGTVVIAKNPCLHPGDVR 832

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            +LEAVD P LHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENLIPP K+SW PM
Sbjct: 833  VLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPM 892

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+A+LL RPV+HQDIIEFFA+NMVNE+LGAICNAHVVHAD  E+GA+DEKC  LAE
Sbjct: 893  QYDAAEAKLLARPVNHQDIIEFFAKNMVNENLGAICNAHVVHADLSEHGAMDEKCLTLAE 952

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGK+V MPS+LKPK+YPDFMGKE+Y
Sbjct: 953  LAATAVDFPKTGKVVTMPSYLKPKVYPDFMGKEEY 987


>ref|XP_012076580.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
            gi|643724398|gb|KDP33599.1| hypothetical protein
            JCGZ_07170 [Jatropha curcas]
          Length = 1199

 Score = 1072 bits (2772), Expect = 0.0
 Identities = 518/635 (81%), Positives = 574/635 (90%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +D+FFDLLR+Q  ++NVAALKHI SYK+PVFDA+K LK VQEWLLKNPKL+K  KQ+DDI
Sbjct: 351  SDNFFDLLRNQSLDINVAALKHICSYKQPVFDAHKGLKAVQEWLLKNPKLFKRSKQLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VEIRRLA+TPT+AYCLPPEVELSNRVLRKYK++ADRFLRVTFMDEGLQT+NAN L+YY+A
Sbjct: 411  VEIRRLALTPTRAYCLPPEVELSNRVLRKYKNIADRFLRVTFMDEGLQTINANTLTYYVA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDITS SFSQKTR+F+RVKS+L+ GF LCGR+YSFLAFSSNQLRDRSAWFFAEDGK 
Sbjct: 471  PIVRDITSTSFSQKTRIFRRVKSILTDGFNLCGRRYSFLAFSSNQLRDRSAWFFAEDGKI 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V +I+ WMGRFT+RNIAKCAARMGQCFSSTYATVEVP +EV+  LPDI+R+ Y FSDGI
Sbjct: 531  SVGQIRKWMGRFTNRNIAKCAARMGQCFSSTYATVEVPSSEVNHALPDIERNGYIFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLKLD++  PCAYQIRYAG KGVVA WP + DGIR+SLR SMNKFQS
Sbjct: 591  GTITPDLAKEVAEKLKLDIN-LPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNV DE FW MQ +MVSKLN+ML D+DVAF++
Sbjct: 650  NHTTLEICSWTRFQPGFLNRQIITLLSTLNVSDEVFWEMQTAMVSKLNKMLTDADVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            +T +CAEQGNTAAIMLSAGFKPQ EPHLRGMLTCIRAAQ WGLREKARIFV SGRWLMGC
Sbjct: 710  ITKSCAEQGNTAAIMLSAGFKPQNEPHLRGMLTCIRAAQFWGLREKARIFVTSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCFIQVS P LE CFSKHGS+F ETKK LQVIKG VVI KNPCLHPGD+R
Sbjct: 770  LDELGVLEQGQCFIQVSNPCLETCFSKHGSKFSETKKNLQVIKGTVVIAKNPCLHPGDVR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHL+DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWD+NLIPP KKSW PM
Sbjct: 830  ILEAVDAPGLHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDDNLIPPSKKSWTPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+A+LL RPV HQDII+FFA+NMVNE+LGAICNAHVVHAD  E+GALDE C  LAE
Sbjct: 890  QYDAAEAKLLNRPVSHQDIIDFFAKNMVNENLGAICNAHVVHADLSEHGALDENCIKLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGK+V MP +LKPK+YPDFMGKE+Y
Sbjct: 950  LAATAVDFPKTGKLVTMPPYLKPKMYPDFMGKEEY 984


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score = 1070 bits (2766), Expect = 0.0
 Identities = 518/635 (81%), Positives = 567/635 (89%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++ FFDLLR+QP EVNVAALKHIY Y+RPVFDAYK+LKV QEWLLKNPK +K  K++DDI
Sbjct: 351  SNDFFDLLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPKFFKNQKKLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
             EIRRL ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMN+N L+Y+ A
Sbjct: 411  AEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNSNALNYFAA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVR ITS SF QKTR+FKRV+S+L+ GFYLCGR+YSFLAFSSNQLRDRSAWFFAED   
Sbjct: 471  PIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNI 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V+ IK+WMG+FT++NIAKCAARMGQCFSSTYAT+EVP  EV+ +LPDIKR+ Y+FSDGI
Sbjct: 531  NVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLK D   PPCAYQIRYAG KGVVA WP + DGIR+SLR SMNKFQS
Sbjct: 591  GMITPDLAREVAEKLKFDFD-PPCAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HT LEICSWTRFQPGFLNRQIITLL+ LNVPD  FW MQ  MVSKLNQMLVDSDVAF++
Sbjct: 650  NHTILEICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQMLVDSDVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+CAEQGN AAIMLSAGFKPQ EPHLRGMLTC+RAAQLWGLREKARIFVPSGRWLMGC
Sbjct: 710  LTASCAEQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIFVPSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCFIQVS   LENCF KHGS+F ETKK LQV+KG VVI KNPCLHPGDIR
Sbjct: 770  LDELGVLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHLYDCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPP K+SW PM
Sbjct: 830  ILEAVDAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+A+ LTRPV+HQDI+EFFA+NM NE+LGAICNAHVV AD  EYGALDEKC  LAE
Sbjct: 890  QYDAAEAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGKIV+MPS LKPK+YPDFMGKE++
Sbjct: 950  LAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEH 984


>ref|XP_012071453.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Jatropha curcas]
            gi|643731347|gb|KDP38635.1| hypothetical protein
            JCGZ_03988 [Jatropha curcas]
          Length = 1198

 Score = 1068 bits (2763), Expect = 0.0
 Identities = 516/635 (81%), Positives = 571/635 (89%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +D FFDLLR+QP ++NVAALKHI SYKRPVFDA++RLK VQEWLLKNPKL+K PKQ+DDI
Sbjct: 351  SDDFFDLLRNQPADINVAALKHICSYKRPVFDAHRRLKAVQEWLLKNPKLFKCPKQLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            V+IRRLAITPT+AYCLPPE+ELSNRVLRKYK+ ADRFLRVTFMDEGLQT+NAN L+YY+A
Sbjct: 411  VQIRRLAITPTRAYCLPPEIELSNRVLRKYKNFADRFLRVTFMDEGLQTINANTLTYYVA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDITS SFSQKTR+FKRVKS+L+ GFYLCGR+YSFLAFSSNQLRDRSAWFFAEDGK 
Sbjct: 471  PIVRDITSTSFSQKTRIFKRVKSILTDGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDGKI 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
            RV +I+ WMG+FT++NIAKCAARMGQCFSSTYATVEVP  EV+   PDI+R+ Y FSDGI
Sbjct: 531  RVDQIRKWMGKFTNKNIAKCAARMGQCFSSTYATVEVPSAEVNLAHPDIERNGYTFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA  VA+KLKLD++ PPCAYQIRYAG KGVVA WP + DGIR+SLR SMNKFQS
Sbjct: 591  GMITPDLAKAVAEKLKLDIN-PPCAYQIRYAGCKGVVACWPAQGDGIRLSLRPSMNKFQS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNV DE FW MQ +MVSKLN+ML D+DVAF++
Sbjct: 650  NHTTLEICSWTRFQPGFLNRQIITLLSTLNVSDEIFWKMQIAMVSKLNKMLTDADVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            +TA+C EQGNTAA+MLSAGFKPQ EPHLRGMLTCIRAAQ   LREKARIFV SGRWLMGC
Sbjct: 710  ITASCTEQGNTAALMLSAGFKPQNEPHLRGMLTCIRAAQFCDLREKARIFVSSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCFIQVS PSLE CFSKHGSRF ETKK LQVI G VVI KNPCLHPGD+R
Sbjct: 770  LDELGVLEQGQCFIQVSNPSLETCFSKHGSRFSETKKNLQVITGTVVIAKNPCLHPGDVR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P L HL+DCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPP K+SW PM
Sbjct: 830  ILEAVDAPGLCHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKQSWTPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+ +LL+RPV HQDII+FFA+NMVNESLGAICNAHVV AD  EYGALDE C  LAE
Sbjct: 890  QYDAAEPKLLSRPVSHQDIIDFFAKNMVNESLGAICNAHVVRADLSEYGALDENCIKLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGK+V +P +LKPK+YPDFMGKE+Y
Sbjct: 950  LAATAVDFPKTGKLVTLPQYLKPKMYPDFMGKEEY 984


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score = 1064 bits (2752), Expect = 0.0
 Identities = 516/635 (81%), Positives = 575/635 (90%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++ FF+LLR QPREVNVAALKHIYSY+RPVFDAYKRLK V +WLL+NP L+K PKQ+DDI
Sbjct: 351  SEDFFNLLRDQPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNPILFKSPKQLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VEIRRL ITPTKA+CL PEVELSNRVLRKYK+VADRFLRVTFMDEG+QT+NANVL+YY A
Sbjct: 411  VEIRRLVITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINANVLTYYAA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
             IVRD+TS  FSQKT VFKRV+S+L+ GFYLCGRKYSFLAFS+NQLRD SAWFFAEDGKT
Sbjct: 471  SIVRDVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRDSSAWFFAEDGKT 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL+I  WMG+FT+RNIAKCAARMGQCFSSTYATVEVP TEV+P LPDI+R+ Y FSDGI
Sbjct: 531  SVLQILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPDIERNGYVFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKITPDLA EVAQKLKLD++ PPCAYQIRYAG KGVVA WP + DG+R+SLR SMNKF S
Sbjct: 591  GKITPDLAKEVAQKLKLDLN-PPCAYQIRYAGCKGVVACWPEEGDGVRLSLRCSMNKFFS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+T  VPDE FW MQ +MVSKLN++LVD+DVAFE+
Sbjct: 650  DHTTLEICSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNKILVDTDVAFEV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LT++C+EQGN AAIMLSAGFKPQTEPHLRG+LTC+RA+QL GLREKARIFVPSGRWLMG 
Sbjct: 710  LTSSCSEQGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARIFVPSGRWLMGV 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCFIQVS PS+ENCF KHGSRF ETKK  +VI+G VVI KNPCLHPGDIR
Sbjct: 770  LDELGVLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTW++ LIPPGKKSWPPM
Sbjct: 830  ILEAVDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y P + + + R V+H+DII+FFA+NMVNE LG ICNAHVVHAD  EYGALDEKC HLAE
Sbjct: 890  QYDPGETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGKIV+MP++LKPKLYPDFMGKE+Y
Sbjct: 950  LAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEY 984


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 506/635 (79%), Positives = 572/635 (90%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++ FFDLLR+Q  EVNV+ALKHI +Y+RPVF+AY+RLK VQEWLLKNP L+K PKQ+ D+
Sbjct: 354  SNDFFDLLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLKNPNLFKNPKQLGDV 413

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VEIRRL ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQ MN+NVL+YY+A
Sbjct: 414  VEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQRMNSNVLNYYVA 473

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVRDITSNSF QKTR+FKRV+S+L+ GFYLCGR+YSFLAFS+NQLRD+SAWFF+E+   
Sbjct: 474  PIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQLRDQSAWFFSEERNI 533

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL++K+WMG+FT+RNIAKCAARMGQCFSSTYAT+EVP  EV+ +LPDI+R+ Y FSDGI
Sbjct: 534  SVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIERNGYVFSDGI 593

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLKLD+  PPCAYQIRYAG KGVVA WPGK DG+R+SLR SMNKFQS
Sbjct: 594  GIITPDLAREVAEKLKLDID-PPCAYQIRYAGCKGVVACWPGKGDGVRLSLRPSMNKFQS 652

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TLNVPD  FW MQ +MVSKLNQM V+SDVAF++
Sbjct: 653  NHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKLNQMFVNSDVAFDV 712

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+CA+QGN AAIMLSAGFKP  EPHLRGMLTC+RAAQLW LREK RIFVPSGRWLMGC
Sbjct: 713  LTASCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKTRIFVPSGRWLMGC 772

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELG+LEQGQCFIQVS  SLE CF KHG++F E +K LQVIKG VVI KNPCLHPGD+R
Sbjct: 773  LDELGMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVR 832

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            +LEAVD P LHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTWDENLIPP K+SW PM
Sbjct: 833  VLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPM 892

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+A+LL RPV+HQDIIEFFA+NMVN++LGAICNAHVVHAD  EYGA D+ C  LAE
Sbjct: 893  QYDAAEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAE 952

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGK+V+MP +LKPK+YPDFMGKE+Y
Sbjct: 953  LAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEY 987


>ref|XP_004291459.2| PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Fragaria vesca
            subsp. vesca]
          Length = 1200

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 509/635 (80%), Positives = 567/635 (89%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++SFFDLLR+QP E+NVAALKH+ SYK PVFDA KRLK+VQEWLL+NPKL K PK++DDI
Sbjct: 354  SESFFDLLRNQPEEINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDI 413

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
             E+RRL ITPTKAYCLPPEVELSNRVLRKYK+VADRFLRVTFMDEG+QTMN+NV++ Y+A
Sbjct: 414  AEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVA 473

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIV++IT N+F QKT+V+ R++++L +GF+LCGRKYSFLAFSSNQLRDRSAWFFAED   
Sbjct: 474  PIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTI 533

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             +  IKNWMGRFT+RN+AKCAARMGQCFSSTYATVEVP T+V+ ELPDI+R+ Y FSDGI
Sbjct: 534  SIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGI 593

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G+ITPDLAMEVA+KLKLD   PP AYQIRY G KGVVA WP   DG R+SLR SMNKF S
Sbjct: 594  GRITPDLAMEVAEKLKLD-RDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFAS 652

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTR QPGFLNRQIITLL+ LNVPDE FW MQ +MVSKL QMLVD+DVAF++
Sbjct: 653  DHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDV 712

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+CAEQGN+AAIMLSAGFKPQTEPHLRGMLTCI+AAQLWGLREK RIFVPSGRWLMGC
Sbjct: 713  LTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGC 772

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEET-KKLQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCF+QVS PSLENCF+KHGSRF++T K LQVIKGFVV+ KNPCLHPGDIR
Sbjct: 773  LDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIR 832

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHL+DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDENLIPP KKSW PM
Sbjct: 833  ILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPM 892

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            EY PA+A+L  R V  QD+IEFF RNMVNE+LGAICNAHVVH+DR EYGA DE C  LAE
Sbjct: 893  EYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAE 952

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAA AVDFPKTGKIV MP HLKPKLYPDFMGK+DY
Sbjct: 953  LAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDY 987


>ref|XP_011459183.1| PREDICTED: RNA-dependent RNA polymerase 6 isoform X2 [Fragaria vesca
            subsp. vesca]
          Length = 1197

 Score = 1059 bits (2738), Expect = 0.0
 Identities = 509/635 (80%), Positives = 567/635 (89%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++SFFDLLR+QP E+NVAALKH+ SYK PVFDA KRLK+VQEWLL+NPKL K PK++DDI
Sbjct: 351  SESFFDLLRNQPEEINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPKLIKNPKRLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
             E+RRL ITPTKAYCLPPEVELSNRVLRKYK+VADRFLRVTFMDEG+QTMN+NV++ Y+A
Sbjct: 411  AEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTMNSNVMNSYVA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIV++IT N+F QKT+V+ R++++L +GF+LCGRKYSFLAFSSNQLRDRSAWFFAED   
Sbjct: 471  PIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDRSAWFFAEDKTI 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             +  IKNWMGRFT+RN+AKCAARMGQCFSSTYATVEVP T+V+ ELPDI+R+ Y FSDGI
Sbjct: 531  SIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDIERNGYVFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G+ITPDLAMEVA+KLKLD   PP AYQIRY G KGVVA WP   DG R+SLR SMNKF S
Sbjct: 591  GRITPDLAMEVAEKLKLD-RDPPSAYQIRYGGCKGVVACWPSTGDGFRLSLRRSMNKFAS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTR QPGFLNRQIITLL+ LNVPDE FW MQ +MVSKL QMLVD+DVAF++
Sbjct: 650  DHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQMLVDTDVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+CAEQGN+AAIMLSAGFKPQTEPHLRGMLTCI+AAQLWGLREK RIFVPSGRWLMGC
Sbjct: 710  LTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIFVPSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEET-KKLQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCF+QVS PSLENCF+KHGSRF++T K LQVIKGFVV+ KNPCLHPGDIR
Sbjct: 770  LDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHL+DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDENLIPP KKSW PM
Sbjct: 830  ILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            EY PA+A+L  R V  QD+IEFF RNMVNE+LGAICNAHVVH+DR EYGA DE C  LAE
Sbjct: 890  EYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAA AVDFPKTGKIV MP HLKPKLYPDFMGK+DY
Sbjct: 950  LAAVAVDFPKTGKIVTMPPHLKPKLYPDFMGKQDY 984


>ref|XP_010101266.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
            gi|587899821|gb|EXB88201.1| RNA-dependent RNA polymerase
            6 [Morus notabilis]
          Length = 1194

 Score = 1058 bits (2737), Expect = 0.0
 Identities = 514/635 (80%), Positives = 565/635 (88%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +D  FDL R+QPRE+N+AALKHI SYKRPVFDAY +LK VQEWLL+NPKL KIP+Q+DDI
Sbjct: 347  SDGLFDLFRNQPREINLAALKHISSYKRPVFDAYAKLKNVQEWLLRNPKLLKIPRQLDDI 406

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
             E+RRL ITPT+AYCLPPEVELSNRVLRKYK+V+DRFLRVTFMDEG+QTMN NVL+YY A
Sbjct: 407  AEVRRLVITPTRAYCLPPEVELSNRVLRKYKEVSDRFLRVTFMDEGMQTMNLNVLTYYPA 466

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIV+++TSNS SQKT+VFKRVKSLL+ GFYLCG++YSFLAFSSNQLRDRSAWFFAEDGK 
Sbjct: 467  PIVKELTSNSTSQKTKVFKRVKSLLTDGFYLCGQRYSFLAFSSNQLRDRSAWFFAEDGKI 526

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V  IK WMGRF +RNIAKCAARMGQCFSSTYATVEVP TEV+ +L +I+R+ Y FSDGI
Sbjct: 527  TVNGIKKWMGRFNNRNIAKCAARMGQCFSSTYATVEVPLTEVNFDLEEIERNTYVFSDGI 586

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLKLD++ PP AYQIRYAG KGVVA WP K DGIR+SLR SMNKF S
Sbjct: 587  GMITPDLAKEVAEKLKLDIN-PPSAYQIRYAGCKGVVACWPPKGDGIRLSLRRSMNKFDS 645

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
            +HT LEICSWTRFQPGFLNRQI+TLL+TLNV DE FW MQ +M+ KLNQML D+DVAF +
Sbjct: 646  KHTILEICSWTRFQPGFLNRQIVTLLSTLNVRDEIFWKMQETMLFKLNQMLTDADVAFNV 705

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+C EQGN  AIMLSAGFKPQ+EPHL+GMLTCIRAAQLWGLREKARIFVP GRWLMGC
Sbjct: 706  LTASCPEQGNVGAIMLSAGFKPQSEPHLQGMLTCIRAAQLWGLREKARIFVPLGRWLMGC 765

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETK-KLQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCFIQVS PSLENCFSKHGSRF ETK  L+VIKGFVVI KNPCLHPGDIR
Sbjct: 766  LDELGVLEQGQCFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGFVVIAKNPCLHPGDIR 825

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHLYDCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENLIPP KKSW PM
Sbjct: 826  ILEAVDVPGLHHLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLIPPSKKSWNPM 885

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y PA+ R L R V  +DII+FF+RNMVNESLGAICNAHVVHAD  +YGALDEKC  LAE
Sbjct: 886  QYDPAKPRTLPRDVTQKDIIDFFSRNMVNESLGAICNAHVVHADLSDYGALDEKCLSLAE 945

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAA AVDFPKTG IV MP+HLKPK+YPDFMGKE+Y
Sbjct: 946  LAAIAVDFPKTGIIVTMPAHLKPKIYPDFMGKEEY 980


>ref|XP_011039698.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Populus euphratica]
          Length = 1195

 Score = 1058 bits (2737), Expect = 0.0
 Identities = 514/635 (80%), Positives = 564/635 (88%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++ FFDLLR+QP EVNVAALKHIY Y+RPVFDAYK+LKV QEWLLKNPKL+K  K++DDI
Sbjct: 351  SNDFFDLLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVTQEWLLKNPKLFKNQKKLDDI 410

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
             EIRRL ITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEG+QTMN+N L+Y+ A
Sbjct: 411  AEIRRLIITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGVQTMNSNALNYFAA 470

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIVR ITS SF QKTR+FKRV+S+L+ GFYLCGR+YSFLAFSSNQLRDRSAWFFAED   
Sbjct: 471  PIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDRSAWFFAEDRNI 530

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V+ IK+WMG+FT++NIAKCAARMGQCFSSTYAT+EVP  EV+ +LPDIKR+ Y+FSDGI
Sbjct: 531  NVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDIKRNGYDFSDGI 590

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            G ITPDLA EVA+KLK D   PP AYQIRYAG KGVVA WP + DGIR+SLR SMNKFQS
Sbjct: 591  GMITPDLAREVAEKLKFDFD-PPSAYQIRYAGCKGVVACWPEQGDGIRLSLRSSMNKFQS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HT LEICSWTRFQPGFLNRQIITLL+ LNVPD  FW MQ  MVSKLNQMLVDSDVAF++
Sbjct: 650  NHTILEICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQEIMVSKLNQMLVDSDVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            LTA+CAE GN AAIMLSAGFKPQ EPHLRGML C+RAAQLWGLREKARIFVPSGRWLMGC
Sbjct: 710  LTASCAELGNVAAIMLSAGFKPQKEPHLRGMLNCVRAAQLWGLREKARIFVPSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDEL VLEQGQCFIQVS   LENCF KHGS+F ETK+ LQV+KG VVI KNPCLHPGDIR
Sbjct: 770  LDELAVLEQGQCFIQVSNSYLENCFVKHGSKFSETKRNLQVVKGTVVIAKNPCLHPGDIR 829

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHLYDCLVFPQKG+RPH NEASGSDLDGDLYFVTWDENLIPP K+SW PM
Sbjct: 830  ILEAVDDPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPM 889

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y  A+A+ LTRPV+HQDIIEFFA+NM NE+LGAICNAHVV AD  EYGALDEKC  LAE
Sbjct: 890  QYDAAEAKQLTRPVNHQDIIEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAE 949

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAATAVDFPKTGKIV+MPS LKPK+YPDFMGKE++
Sbjct: 950  LAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEH 984


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 501/634 (79%), Positives = 561/634 (88%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +D FFDLLRSQ +++N+AALKHI SY+ PVFDAY+RLK+V +WLLKNPKL K PK++DDI
Sbjct: 191  SDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDI 250

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VE+RRL ITP+KAYCLPPEVELSNRVLR YK+V+DRFLRVTFMDEG+QT+NANVL+YY+A
Sbjct: 251  VEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVA 310

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIV+ ITSNSF QKTRVFKRVK++L+ GFYLCGRKYSFLAFSSNQLRDRSAWFFAED KT
Sbjct: 311  PIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKT 370

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V  IK+WMG+FT+RN+AKCAARMGQCFSSTYATVEVP  EV  ELPDIKR+ Y+FSDGI
Sbjct: 371  SVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGI 429

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKI PDLAMEVA+KLKL+ +P   AYQIRYAG KGVVA WP  +DGIR+S R SMNKF S
Sbjct: 430  GKIVPDLAMEVAEKLKLEGTPS--AYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLS 487

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HT LEICSWTRFQPGFLNRQI+TLL+ LNVPD+ FW MQ SM+SKLNQML D+DVAF++
Sbjct: 488  DHTILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDV 547

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            L A+CAEQGNTAAIMLSAGFKPQTEPHL+GMLTCIRAAQ WGLREKARIFVPSGRWLMGC
Sbjct: 548  LIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGC 607

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKKLQVIKGFVVIGKNPCLHPGDIRI 464
            LDELGVLEQGQCFIQVS PSLENCF KHGSRF   K L+VIKG V I KNPCLHPGD+RI
Sbjct: 608  LDELGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQKNLKVIKGIVAIAKNPCLHPGDVRI 667

Query: 463  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPME 284
            LEAVD P L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTW+E LIPP K+SWPPM+
Sbjct: 668  LEAVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQ 727

Query: 283  YTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAEL 104
            Y  A+A+ L R V   DII+FF +NMVNE+LGAICNAHVVHADR EYGALDE C  LAE 
Sbjct: 728  YDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAER 787

Query: 103  AATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            AATAVDFPKTGK+V +P +LKPK+YPDFMGKE++
Sbjct: 788  AATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEF 821


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
            gi|731385864|ref|XP_010648660.1| PREDICTED: RNA-dependent
            RNA polymerase 6 [Vitis vinifera]
            gi|731385866|ref|XP_010648661.1| PREDICTED: RNA-dependent
            RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1040 bits (2688), Expect = 0.0
 Identities = 501/634 (79%), Positives = 561/634 (88%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            +D FFDLLRSQ +++N+AALKHI SY+ PVFDAY+RLK+V +WLLKNPKL K PK++DDI
Sbjct: 353  SDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLKNPKLLKSPKELDDI 412

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VE+RRL ITP+KAYCLPPEVELSNRVLR YK+V+DRFLRVTFMDEG+QT+NANVL+YY+A
Sbjct: 413  VEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEGMQTINANVLNYYVA 472

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
            PIV+ ITSNSF QKTRVFKRVK++L+ GFYLCGRKYSFLAFSSNQLRDRSAWFFAED KT
Sbjct: 473  PIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDKKT 532

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             V  IK+WMG+FT+RN+AKCAARMGQCFSSTYATVEVP  EV  ELPDIKR+ Y+FSDGI
Sbjct: 533  SVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-ELPDIKRNGYDFSDGI 591

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKI PDLAMEVA+KLKL+ +P   AYQIRYAG KGVVA WP  +DGIR+S R SMNKF S
Sbjct: 592  GKIVPDLAMEVAEKLKLEGTPS--AYQIRYAGCKGVVACWPSDNDGIRLSWRPSMNKFLS 649

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HT LEICSWTRFQPGFLNRQI+TLL+ LNVPD+ FW MQ SM+SKLNQML D+DVAF++
Sbjct: 650  DHTILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKLNQMLTDTDVAFDV 709

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            L A+CAEQGNTAAIMLSAGFKPQTEPHL+GMLTCIRAAQ WGLREKARIFVPSGRWLMGC
Sbjct: 710  LIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKARIFVPSGRWLMGC 769

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKKLQVIKGFVVIGKNPCLHPGDIRI 464
            LDELGVLEQGQCFIQVS PSLENCF KHGSRF   K L+VIKG V I KNPCLHPGD+RI
Sbjct: 770  LDELGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQKNLKVIKGIVAIAKNPCLHPGDVRI 829

Query: 463  LEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPME 284
            LEAVD P L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTW+E LIPP K+SWPPM+
Sbjct: 830  LEAVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEETLIPPSKQSWPPMQ 889

Query: 283  YTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAEL 104
            Y  A+A+ L R V   DII+FF +NMVNE+LGAICNAHVVHADR EYGALDE C  LAE 
Sbjct: 890  YDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSEYGALDEACLDLAER 949

Query: 103  AATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            AATAVDFPKTGK+V +P +LKPK+YPDFMGKE++
Sbjct: 950  AATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEF 983


>gb|KHG28504.1| RNA-dependent RNA polymerase 6 -like protein [Gossypium arboreum]
          Length = 1214

 Score = 1038 bits (2684), Expect = 0.0
 Identities = 506/635 (79%), Positives = 565/635 (88%), Gaps = 1/635 (0%)
 Frame = -1

Query: 1903 ADSFFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDI 1724
            ++ FF LLR+Q  EVNVAALKHIYSY+ PV+DAY++LKVV +WLL+NPKL+K P Q+DDI
Sbjct: 353  SEDFFKLLRNQSMEVNVAALKHIYSYRCPVYDAYEKLKVVHDWLLRNPKLFKSPPQLDDI 412

Query: 1723 VEIRRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIA 1544
            VEIRRLAITPTKAYCL PEVELSNRVLRKYKDVADRFLRVTFMDEG+QTMNANVL+YY A
Sbjct: 413  VEIRRLAITPTKAYCLLPEVELSNRVLRKYKDVADRFLRVTFMDEGMQTMNANVLTYYNA 472

Query: 1543 PIVRDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKT 1364
             IVRD+TS SFSQKT VFKRVKS+L+ GFYLCGRKYSFLAFS+NQLRDRSAWFFAEDGK 
Sbjct: 473  AIVRDVTSTSFSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGKI 532

Query: 1363 RVLEIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGI 1184
             VL+I  WMG+FT+RNIAKCAARMGQCFSSTYA VEVP  +V+  LPDIKR+ Y+FSDGI
Sbjct: 533  NVLQIIGWMGKFTNRNIAKCAARMGQCFSSTYAAVEVPSEQVNMHLPDIKRNGYDFSDGI 592

Query: 1183 GKITPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQS 1004
            GKITPDLAMEVAQKLKLD++ PPCAYQIRYAG KGVV+ WP + D IR+SLR SM KF S
Sbjct: 593  GKITPDLAMEVAQKLKLDLN-PPCAYQIRYAGCKGVVSCWPEEGDRIRLSLRTSMIKFFS 651

Query: 1003 RHTTLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEI 824
             HTTLEICSWTRFQPGFLNRQIITLL+TL VPDE FW MQ SMVSKL+++LVD+D AFE+
Sbjct: 652  HHTTLEICSWTRFQPGFLNRQIITLLSTLGVPDEVFWGMQNSMVSKLDKVLVDTDAAFEV 711

Query: 823  LTAACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGC 644
            + ++C EQG+T AIMLSAGFKPQTEPHLRGMLTC+RA+QLWGLREK+RIF+ SGRWLMG 
Sbjct: 712  VISSCGEQGHTPAIMLSAGFKPQTEPHLRGMLTCVRASQLWGLREKSRIFIHSGRWLMGV 771

Query: 643  LDELGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIR 467
            LDELGVLEQGQCFIQVS PSL+NCF KHGSRF ETKK  +VIKG VVI KNPCLHPGDIR
Sbjct: 772  LDELGVLEQGQCFIQVSTPSLQNCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDIR 831

Query: 466  ILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPM 287
            ILEAVD P LHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTW+E LIPP KKS  PM
Sbjct: 832  ILEAVDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEEALIPPSKKSSQPM 891

Query: 286  EYTPAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAE 107
            +Y P + R L RPV H+DIIEFF++NMVNE LG+ICNAHVVH+D  E+GA DEKC HLAE
Sbjct: 892  QYDPDEPRELNRPVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHGASDEKCIHLAE 951

Query: 106  LAATAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            LAA AVDFPKTGKIV+MP+ LKPKLYPDFMGKE++
Sbjct: 952  LAAIAVDFPKTGKIVSMPAQLKPKLYPDFMGKEEF 986


>ref|XP_010531141.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X2 [Tarenaya
            hassleriana]
          Length = 1195

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 498/632 (78%), Positives = 555/632 (87%), Gaps = 1/632 (0%)
 Frame = -1

Query: 1894 FFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDIVEI 1715
            FFDLLR QP+EVNVAALKH+ +YKRPVFDA +R K+VQEW++KNPKL +  K+ DDIVEI
Sbjct: 350  FFDLLRQQPKEVNVAALKHLCTYKRPVFDACRRFKLVQEWVVKNPKLLESHKKSDDIVEI 409

Query: 1714 RRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIAPIV 1535
            RRLAITPT+AYCLPPEVELSNRVLRKY  + DRFLRVTFMDEG+QTMN+++LSYY+APIV
Sbjct: 410  RRLAITPTRAYCLPPEVELSNRVLRKYTAICDRFLRVTFMDEGMQTMNSSLLSYYVAPIV 469

Query: 1534 RDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTRVL 1355
            +D+ S S SQKT VFKRVK++L+ GFYLCGRKYSFLAFSSNQLRDRSAWFF+EDGKT VL
Sbjct: 470  KDLISYSASQKTHVFKRVKTILTKGFYLCGRKYSFLAFSSNQLRDRSAWFFSEDGKTSVL 529

Query: 1354 EIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGIGKI 1175
            +IK WMG+FT++N+AKCAARMGQCFSSTYATV+V   EVD ELPDI R+ + FSDGIG I
Sbjct: 530  DIKKWMGKFTNKNVAKCAARMGQCFSSTYATVDVMPHEVDDELPDITRNNFVFSDGIGMI 589

Query: 1174 TPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQSRHT 995
            TPDLA EV  KL+LD + PPCA+QIRYAG KGVVA WP K DGIR+SLR SMNKF S+HT
Sbjct: 590  TPDLADEVIDKLRLDANCPPCAFQIRYAGCKGVVARWPSKGDGIRLSLRPSMNKFHSKHT 649

Query: 994  TLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEILTA 815
            TLEICSWT+FQPGFLNRQII LL+TL V D  FW+MQ  M+SKLNQML D+DVAFE+LTA
Sbjct: 650  TLEICSWTKFQPGFLNRQIIILLSTLGVSDNIFWDMQEVMISKLNQMLEDTDVAFEVLTA 709

Query: 814  ACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDE 635
            +CAE GNTAAIMLSAGFKP+TEPHLRGML+ +RAAQLWGLREK RIFVPSGRWLMGCLDE
Sbjct: 710  SCAEHGNTAAIMLSAGFKPKTEPHLRGMLSSVRAAQLWGLREKTRIFVPSGRWLMGCLDE 769

Query: 634  LGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIRILE 458
             GVLEQGQCFIQVS PS+ENCFSKHGSRF ETKK L ++ G+V + KNPCLHPGD+RILE
Sbjct: 770  AGVLEQGQCFIQVSTPSIENCFSKHGSRFSETKKNLHIVTGYVAMAKNPCLHPGDVRILE 829

Query: 457  AVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPMEYT 278
            AVD PELHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTWD NLIPP KKSW PM Y 
Sbjct: 830  AVDVPELHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDLNLIPPSKKSWSPMLYD 889

Query: 277  PAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAELAA 98
              + + LTR V HQDII+FF RNMVN+ LG ICNAHVVHADR EYGALDE C  LAELAA
Sbjct: 890  ATEEKTLTRGVSHQDIIDFFVRNMVNDHLGTICNAHVVHADRSEYGALDEDCILLAELAA 949

Query: 97   TAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            TAVDFPKTGKIV MP HLKPKLYPDFMGKE+Y
Sbjct: 950  TAVDFPKTGKIVTMPHHLKPKLYPDFMGKEEY 981


>ref|XP_010531140.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Tarenaya
            hassleriana]
          Length = 1208

 Score = 1037 bits (2682), Expect = 0.0
 Identities = 498/632 (78%), Positives = 555/632 (87%), Gaps = 1/632 (0%)
 Frame = -1

Query: 1894 FFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDIVEI 1715
            FFDLLR QP+EVNVAALKH+ +YKRPVFDA +R K+VQEW++KNPKL +  K+ DDIVEI
Sbjct: 363  FFDLLRQQPKEVNVAALKHLCTYKRPVFDACRRFKLVQEWVVKNPKLLESHKKSDDIVEI 422

Query: 1714 RRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIAPIV 1535
            RRLAITPT+AYCLPPEVELSNRVLRKY  + DRFLRVTFMDEG+QTMN+++LSYY+APIV
Sbjct: 423  RRLAITPTRAYCLPPEVELSNRVLRKYTAICDRFLRVTFMDEGMQTMNSSLLSYYVAPIV 482

Query: 1534 RDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTRVL 1355
            +D+ S S SQKT VFKRVK++L+ GFYLCGRKYSFLAFSSNQLRDRSAWFF+EDGKT VL
Sbjct: 483  KDLISYSASQKTHVFKRVKTILTKGFYLCGRKYSFLAFSSNQLRDRSAWFFSEDGKTSVL 542

Query: 1354 EIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGIGKI 1175
            +IK WMG+FT++N+AKCAARMGQCFSSTYATV+V   EVD ELPDI R+ + FSDGIG I
Sbjct: 543  DIKKWMGKFTNKNVAKCAARMGQCFSSTYATVDVMPHEVDDELPDITRNNFVFSDGIGMI 602

Query: 1174 TPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQSRHT 995
            TPDLA EV  KL+LD + PPCA+QIRYAG KGVVA WP K DGIR+SLR SMNKF S+HT
Sbjct: 603  TPDLADEVIDKLRLDANCPPCAFQIRYAGCKGVVARWPSKGDGIRLSLRPSMNKFHSKHT 662

Query: 994  TLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEILTA 815
            TLEICSWT+FQPGFLNRQII LL+TL V D  FW+MQ  M+SKLNQML D+DVAFE+LTA
Sbjct: 663  TLEICSWTKFQPGFLNRQIIILLSTLGVSDNIFWDMQEVMISKLNQMLEDTDVAFEVLTA 722

Query: 814  ACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDE 635
            +CAE GNTAAIMLSAGFKP+TEPHLRGML+ +RAAQLWGLREK RIFVPSGRWLMGCLDE
Sbjct: 723  SCAEHGNTAAIMLSAGFKPKTEPHLRGMLSSVRAAQLWGLREKTRIFVPSGRWLMGCLDE 782

Query: 634  LGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIRILE 458
             GVLEQGQCFIQVS PS+ENCFSKHGSRF ETKK L ++ G+V + KNPCLHPGD+RILE
Sbjct: 783  AGVLEQGQCFIQVSTPSIENCFSKHGSRFSETKKNLHIVTGYVAMAKNPCLHPGDVRILE 842

Query: 457  AVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPMEYT 278
            AVD PELHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTWD NLIPP KKSW PM Y 
Sbjct: 843  AVDVPELHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDLNLIPPSKKSWSPMLYD 902

Query: 277  PAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAELAA 98
              + + LTR V HQDII+FF RNMVN+ LG ICNAHVVHADR EYGALDE C  LAELAA
Sbjct: 903  ATEEKTLTRGVSHQDIIDFFVRNMVNDHLGTICNAHVVHADRSEYGALDEDCILLAELAA 962

Query: 97   TAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
            TAVDFPKTGKIV MP HLKPKLYPDFMGKE+Y
Sbjct: 963  TAVDFPKTGKIVTMPHHLKPKLYPDFMGKEEY 994


>ref|XP_012442341.1| PREDICTED: RNA-dependent RNA polymerase 6 [Gossypium raimondii]
            gi|823219218|ref|XP_012442342.1| PREDICTED: RNA-dependent
            RNA polymerase 6 [Gossypium raimondii]
            gi|763788004|gb|KJB55000.1| hypothetical protein
            B456_009G057700 [Gossypium raimondii]
          Length = 1196

 Score = 1033 bits (2672), Expect = 0.0
 Identities = 502/632 (79%), Positives = 562/632 (88%), Gaps = 1/632 (0%)
 Frame = -1

Query: 1894 FFDLLRSQPREVNVAALKHIYSYKRPVFDAYKRLKVVQEWLLKNPKLYKIPKQMDDIVEI 1715
            FF LLR+Q  EVNVAAL+HIYS + PV+DAYKRLK V +WLLKNPKL++ P Q+DDIVEI
Sbjct: 353  FFKLLRNQSMEVNVAALRHIYSSRHPVYDAYKRLKDVHDWLLKNPKLFRSPPQLDDIVEI 412

Query: 1714 RRLAITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQTMNANVLSYYIAPIV 1535
            RRL ITPTKAYCL PEVELSNRVLRKYKDVADRFLRVTFMDEG+QTMNANVL+YY A IV
Sbjct: 413  RRLVITPTKAYCLLPEVELSNRVLRKYKDVADRFLRVTFMDEGMQTMNANVLTYYNAAIV 472

Query: 1534 RDITSNSFSQKTRVFKRVKSLLSSGFYLCGRKYSFLAFSSNQLRDRSAWFFAEDGKTRVL 1355
            RD+TS SFSQKT VFKRVKS+L+ GFYLCGRKYSFLAFS+NQLRDRSAWFFAEDGK  VL
Sbjct: 473  RDVTSTSFSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDRSAWFFAEDGKINVL 532

Query: 1354 EIKNWMGRFTDRNIAKCAARMGQCFSSTYATVEVPRTEVDPELPDIKRSIYNFSDGIGKI 1175
            +I  WMG+F +RNIAKCAARMGQCFSSTYATVEVP  +V+  LPDI+R+ Y+FSDGIGKI
Sbjct: 533  QIIGWMGKFANRNIAKCAARMGQCFSSTYATVEVPSGQVNMHLPDIQRNGYDFSDGIGKI 592

Query: 1174 TPDLAMEVAQKLKLDVSPPPCAYQIRYAGYKGVVASWPGKDDGIRMSLRESMNKFQSRHT 995
            TPDLAMEVAQKLKLD++ PPCAYQIRYAG KGVVA WP + DGIR+SLR SM KF S HT
Sbjct: 593  TPDLAMEVAQKLKLDLN-PPCAYQIRYAGCKGVVACWPEEGDGIRLSLRSSMIKFFSHHT 651

Query: 994  TLEICSWTRFQPGFLNRQIITLLTTLNVPDETFWNMQASMVSKLNQMLVDSDVAFEILTA 815
            TLEICSWTRFQPGFLNRQIITLL+TL VPD+ FW MQ SMVSKL+++LVD+D AFE++ +
Sbjct: 652  TLEICSWTRFQPGFLNRQIITLLSTLGVPDKVFWGMQKSMVSKLDKVLVDTDAAFEVVIS 711

Query: 814  ACAEQGNTAAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDE 635
            +C EQG+T AIMLSAGFKPQTEPHLRGMLTC+RA+QLWGLREK+RIF+ SGRWLMG LDE
Sbjct: 712  SCGEQGHTPAIMLSAGFKPQTEPHLRGMLTCVRASQLWGLREKSRIFIHSGRWLMGVLDE 771

Query: 634  LGVLEQGQCFIQVSEPSLENCFSKHGSRFEETKK-LQVIKGFVVIGKNPCLHPGDIRILE 458
            LGVLEQGQCFIQVS PSL+NCF KHGSRF ETKK  +VIKG VVI KNPCLHPGD+RILE
Sbjct: 772  LGVLEQGQCFIQVSNPSLQNCFLKHGSRFAETKKNFEVIKGLVVIAKNPCLHPGDVRILE 831

Query: 457  AVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPGKKSWPPMEYT 278
            AVD P LHHLYDCLVFPQKG+RPHTNEASGSDLDGDLYFVTW+E LIPP KKS  PM+Y 
Sbjct: 832  AVDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEEALIPPSKKSSQPMQYN 891

Query: 277  PAQARLLTRPVDHQDIIEFFARNMVNESLGAICNAHVVHADRCEYGALDEKCTHLAELAA 98
            P + R L RPV H+DIIEFF++NMVNE LG+ICNAHVVH+D  ++GA DEKC HLAELAA
Sbjct: 892  PDEPRELHRPVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSDHGASDEKCIHLAELAA 951

Query: 97   TAVDFPKTGKIVNMPSHLKPKLYPDFMGKEDY 2
             AVDFPKTGKIV+MP+HLKP+LYPDFMGKE++
Sbjct: 952  IAVDFPKTGKIVSMPAHLKPQLYPDFMGKEEF 983