BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00015937
         (526 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,...   248   1e-63
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr...   248   1e-63
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun...   199   7e-49
ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD,...   199   9e-49
ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD,...   197   3e-48
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,...   197   3e-48
emb|CBI24961.3| unnamed protein product [Vitis vinifera]              195   1e-47
ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD,...   194   2e-47
ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus nota...   193   4e-47
gb|AKC88710.1| sigma factor [Hypseocharis bilobata]                   189   7e-46
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu...   187   3e-45
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu...   187   3e-45
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu...   187   3e-45
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu...   187   3e-45
ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD,...   186   6e-45
ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD,...   186   6e-45
ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD,...   180   3e-43
ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Popu...   180   3e-43
ref|XP_012065614.1| PREDICTED: RNA polymerase sigma factor sigD,...   180   4e-43
ref|XP_008350435.1| PREDICTED: RNA polymerase sigma factor sigD,...   180   4e-43

>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Citrus sinensis]
          Length = 436

 Score =  248 bits (634), Expect = 1e-63
 Identities = 126/168 (75%), Positives = 142/168 (84%)
 Frame = -1

Query: 505 KKKVEGYEFLDKESGQXXXXXXXXXXXXXXLSPSEEAEICLCLKEGARLEEARKTIGLRE 326
           KK+ +  +FLDKE+G+              L+PSEEAEIC  LKEGA+LEEARKT+   E
Sbjct: 110 KKRTKESDFLDKENGELDYNLVKCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAE 169

Query: 325 EHESITKKLSKATGMKRSEVDKILCKERESQERIIRSYRGLVVSIATGYQGKGLSLQDLI 146
           EHESI+K+L+KATGMK+S+VDKILCKERESQERIIRSYR LVVSIATGYQGKGLSL+DLI
Sbjct: 170 EHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLI 229

Query: 145 QEGSMGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRAVQNKSRIIRLP 2
           QEGS+GLLRGAKRFNPERGYKLSTYVYWWIKQAIIR + NKSR IRLP
Sbjct: 230 QEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSRTIRLP 277


>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
           gi|557541154|gb|ESR52198.1| hypothetical protein
           CICLE_v10033747mg [Citrus clementina]
          Length = 436

 Score =  248 bits (634), Expect = 1e-63
 Identities = 126/168 (75%), Positives = 142/168 (84%)
 Frame = -1

Query: 505 KKKVEGYEFLDKESGQXXXXXXXXXXXXXXLSPSEEAEICLCLKEGARLEEARKTIGLRE 326
           KK+ +  +FLDKE+G+              L+PSEEAEIC  LKEGA+LEEARKT+   E
Sbjct: 110 KKRTKESDFLDKENGELDYNLVKCKTSNLYLTPSEEAEICYSLKEGAKLEEARKTVAQAE 169

Query: 325 EHESITKKLSKATGMKRSEVDKILCKERESQERIIRSYRGLVVSIATGYQGKGLSLQDLI 146
           EHESI+K+L+KATGMK+S+VDKILCKERESQERIIRSYR LVVSIATGYQGKGLSL+DLI
Sbjct: 170 EHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLVVSIATGYQGKGLSLKDLI 229

Query: 145 QEGSMGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRAVQNKSRIIRLP 2
           QEGS+GLLRGAKRFNPERGYKLSTYVYWWIKQAIIR + NKSR IRLP
Sbjct: 230 QEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKSRTIRLP 277


>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
           gi|462415663|gb|EMJ20400.1| hypothetical protein
           PRUPE_ppa017025mg [Prunus persica]
          Length = 440

 Score =  199 bits (506), Expect = 7e-49
 Identities = 103/170 (60%), Positives = 127/170 (74%), Gaps = 2/170 (1%)
 Frame = -1

Query: 505 KKKVEGYEFLDKESGQXXXXXXXXXXXXXXL--SPSEEAEICLCLKEGARLEEARKTIGL 332
           +K+ +G E LD+E  +                 SP EEAE CL LKEGARLE  R  +  
Sbjct: 112 RKRRKGLEALDEEMKRDVEDGMVSFGFVRYEHLSPREEAECCLSLKEGARLESERFRVVE 171

Query: 331 REEHESITKKLSKATGMKRSEVDKILCKERESQERIIRSYRGLVVSIATGYQGKGLSLQD 152
            ++HE  +K+L+KA GMK   +DK+LCK RESQE+IIRSYRGLVVS+A+ YQGKGLS QD
Sbjct: 172 AQKHEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLVVSVASSYQGKGLSFQD 231

Query: 151 LIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRAVQNKSRIIRLP 2
           LIQEGS+GLLRGA++F+ ER +KLSTYVYWWI+QAIIRA++NKSRIIRLP
Sbjct: 232 LIQEGSIGLLRGAEKFDHEREWKLSTYVYWWIRQAIIRAIENKSRIIRLP 281


>ref|XP_008231483.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Prunus
           mume]
          Length = 442

 Score =  199 bits (505), Expect = 9e-49
 Identities = 97/137 (70%), Positives = 116/137 (84%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE CL LKEGARLE  R  +   ++HE  +K+L+KA GMK   +DK+LCK RESQ
Sbjct: 145 SPREEAECCLSLKEGARLESERFRVVEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRESQ 204

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYRGLVVS+A+ YQGKGLS QDLIQEGS+GLLRGA++F+ ER +KLSTYVYWWI+
Sbjct: 205 EKIIRSYRGLVVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERKWKLSTYVYWWIR 264

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAIIRA++NKSRIIRLP
Sbjct: 265 QAIIRAIENKSRIIRLP 281


>ref|XP_002272444.2| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Vitis
           vinifera]
          Length = 442

 Score =  197 bits (501), Expect = 3e-48
 Identities = 101/168 (60%), Positives = 124/168 (73%)
 Frame = -1

Query: 505 KKKVEGYEFLDKESGQXXXXXXXXXXXXXXLSPSEEAEICLCLKEGARLEEARKTIGLRE 326
           ++ VE    ++K  G+              L+P EEAE CLCLKE A LE AR+ I    
Sbjct: 116 RRGVEALGMVEKWDGEEVHEVSFGAARSAVLTPREEAEFCLCLKEEAGLEAARRRIAETR 175

Query: 325 EHESITKKLSKATGMKRSEVDKILCKERESQERIIRSYRGLVVSIATGYQGKGLSLQDLI 146
           EHE  + + ++A G+KRS +DK+LC  RES+ERI +SYR LVVSIA  YQGKGLSLQDLI
Sbjct: 176 EHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLVVSIAARYQGKGLSLQDLI 235

Query: 145 QEGSMGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRAVQNKSRIIRLP 2
           QEGS+GLLRGA+RF+P+RGYKLSTYVYWWI+QAI+RA+ NKSRIIRLP
Sbjct: 236 QEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKSRIIRLP 283


>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic
           [Fragaria vesca subsp. vesca]
          Length = 452

 Score =  197 bits (500), Expect = 3e-48
 Identities = 94/137 (68%), Positives = 115/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEA+ C+ LKEGA+LE  R      +EHE  +K+L+ A  +K S +DK++C  RESQ
Sbjct: 157 SPREEADCCMSLKEGAKLESERTRFTEAQEHEPTSKQLANAMRIKMSSIDKVICNRRESQ 216

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           ERII+SYRGLVVS+A+ YQGKGLSLQDLIQEGS+GLLRGA++F+PERG KLSTYVYWWI+
Sbjct: 217 ERIIKSYRGLVVSVASSYQGKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVYWWIR 276

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAIIRA++NKSRIIRLP
Sbjct: 277 QAIIRAIENKSRIIRLP 293


>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  195 bits (495), Expect = 1e-47
 Identities = 96/137 (70%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           +P EEAE CLCLKE A LE AR+ I    EHE  + + ++A G+KRS +DK+LC  RES+
Sbjct: 24  TPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESR 83

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           ERI +SYR LVVSIA  YQGKGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWI+
Sbjct: 84  ERINQSYRRLVVSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIR 143

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAI+RA+ NKSRIIRLP
Sbjct: 144 QAIVRAIANKSRIIRLP 160


>ref|XP_009354359.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Pyrus x
           bretschneideri]
          Length = 436

 Score =  194 bits (494), Expect = 2e-47
 Identities = 97/137 (70%), Positives = 113/137 (82%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           S  EEAE CL LKEGARLE  R  +   EE E  +K+L+KA GMK   +DK+LCK+RESQ
Sbjct: 141 SSKEEAECCLSLKEGARLESRRLRVVEDEEQEPTSKQLAKAMGMKTRSIDKVLCKKRESQ 200

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           ERIIRSYRGL+VS+A+ YQGKGLS QDLIQEGS+GLLRGA++F+ ERG KLSTYVYWWI+
Sbjct: 201 ERIIRSYRGLIVSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERGCKLSTYVYWWIR 260

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAIIRA+  KSRIIRLP
Sbjct: 261 QAIIRALDKKSRIIRLP 277


>ref|XP_010103268.1| RNA polymerase sigma factor rpoD [Morus notabilis]
           gi|587907279|gb|EXB95293.1| RNA polymerase sigma factor
           rpoD [Morus notabilis]
          Length = 422

 Score =  193 bits (491), Expect = 4e-47
 Identities = 93/137 (67%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE CL LKEGA+LE  R  +   E+HE  +K+L+KA GM+   +DK+LC +RESQ
Sbjct: 124 SPREEAECCLILKEGAKLEATRLRMTNSEDHEPTSKELAKAMGMEMRSIDKMLCDKRESQ 183

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           ERI RSYR LVVS+A GYQGKGLS  DLIQEGS+GLLRGA++F+P+RG KLSTYVYWWI+
Sbjct: 184 ERISRSYRRLVVSVAAGYQGKGLSFPDLIQEGSVGLLRGAQKFDPQRGNKLSTYVYWWIR 243

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAIIRA++NKSR++RLP
Sbjct: 244 QAIIRAIENKSRVVRLP 260


>gb|AKC88710.1| sigma factor [Hypseocharis bilobata]
          Length = 437

 Score =  189 bits (480), Expect = 7e-46
 Identities = 90/137 (65%), Positives = 111/137 (81%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           +P +EAE C+CLKEGARLE  R+ +    + E   K+L+ A GMK+  +D+ILC  R SQ
Sbjct: 139 TPKQEAEFCMCLKEGARLEAQRRKLAEACKQEPSLKQLAMAMGMKKRNIDRILCNRRVSQ 198

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E IIR+YRGLVVSIA GYQG+GLSLQDLIQ GS+GLLRGA+RF+P RGYKLSTYVYWW++
Sbjct: 199 ETIIRTYRGLVVSIAIGYQGRGLSLQDLIQAGSIGLLRGAERFDPNRGYKLSTYVYWWVR 258

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAI++AV N SR+IRLP
Sbjct: 259 QAIVKAVANDSRLIRLP 275


>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331146|gb|ERP56881.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 423

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AI+ A+ N +R++RLP
Sbjct: 247 EAILTAISNNTRMVRLP 263


>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331144|gb|ERP56879.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 284

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AI+ A+ N +R++RLP
Sbjct: 247 EAILTAISNNTRMVRLP 263


>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331143|gb|ERP56878.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 276

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AI+ A+ N +R++RLP
Sbjct: 247 EAILTAISNNTRMVRLP 263


>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331142|gb|ERP56877.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 331

 Score =  187 bits (474), Expect = 3e-45
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AI+ A+ N +R++RLP
Sbjct: 247 EAILTAISNNTRMVRLP 263


>ref|XP_011025492.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Populus euphratica]
          Length = 354

 Score =  186 bits (472), Expect = 6e-45
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLAKALRMEKNTVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AI+ A+ N +R++RLP
Sbjct: 247 EAILTAISNNTRMVRLP 263


>ref|XP_011025491.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X1 [Populus euphratica]
          Length = 423

 Score =  186 bits (472), Expect = 6e-45
 Identities = 90/137 (65%), Positives = 114/137 (83%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGDVQELDPTSKQLAKALRMEKNTVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AI+ A+ N +R++RLP
Sbjct: 247 EAILTAISNNTRMVRLP 263


>ref|XP_010269782.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Nelumbo
           nucifera]
          Length = 455

 Score =  180 bits (457), Expect = 3e-43
 Identities = 88/137 (64%), Positives = 111/137 (81%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           +P EEAE  L LKE ARLE AR  +    EHE  + + ++A GM+ + +DK+LC+ RES+
Sbjct: 160 TPKEEAEFSLYLKEEARLEAARTRLRETNEHEPTSSQWAEAAGMRGATLDKMLCQARESR 219

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           ERI+ SYR L+ SIA+GYQGKGLSLQDLIQEGS+GLLRG +RF+P +GYKLSTYVYWWIK
Sbjct: 220 ERIVFSYRRLIFSIASGYQGKGLSLQDLIQEGSIGLLRGXERFDPRKGYKLSTYVYWWIK 279

Query: 52  QAIIRAVQNKSRIIRLP 2
           QAIIRA+ +KSR++RLP
Sbjct: 280 QAIIRAIASKSRMVRLP 296


>ref|XP_006379083.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
           gi|550331145|gb|ERP56880.1| hypothetical protein
           POPTR_0009s06210g [Populus trichocarpa]
          Length = 419

 Score =  180 bits (457), Expect = 3e-43
 Identities = 88/135 (65%), Positives = 111/135 (82%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EEAE  +CLK  AR+E AR+ IG  +E +  +K+L+KA  M+++ VD +LCK RES+
Sbjct: 127 SPKEEAEFSMCLKHEARIEAARRRIGEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESR 186

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
           E+IIRSYR LVVSIAT YQ KGLSLQDLIQEGS+GLLRGA+RF+P+RGYKLSTYVYWWIK
Sbjct: 187 EKIIRSYRRLVVSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIK 246

Query: 52  QAIIRAVQNKSRIIR 8
           +AI+ A+ N +R+ R
Sbjct: 247 EAILTAISNNTRMRR 261


>ref|XP_012065614.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform
           X2 [Jatropha curcas]
          Length = 357

 Score =  180 bits (456), Expect = 4e-43
 Identities = 90/137 (65%), Positives = 107/137 (78%)
 Frame = -1

Query: 412 SPSEEAEICLCLKEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQ 233
           SP EE E CLCLK+ ARLE AR+ I   +EHE   K+L+KA  M+R  V KI CK RES+
Sbjct: 134 SPIEETEFCLCLKDQARLEAARRRIAETQEHEPTLKQLAKALKMRRRSVGKIPCKGRESR 193

Query: 232 ERIIRSYRGLVVSIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIK 53
            RI   Y+ LVVSIA  Y+GKGLSLQDLIQEGS+GLLRGA+RF+P RG KLSTYVYWWI+
Sbjct: 194 RRITYYYKRLVVSIAKSYRGKGLSLQDLIQEGSIGLLRGAERFDPSRGNKLSTYVYWWIR 253

Query: 52  QAIIRAVQNKSRIIRLP 2
           +AII ++ NKSRI+RLP
Sbjct: 254 EAIITSISNKSRIVRLP 270


>ref|XP_008350435.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic [Malus
           domestica]
          Length = 280

 Score =  180 bits (456), Expect = 4e-43
 Identities = 88/125 (70%), Positives = 106/125 (84%)
 Frame = -1

Query: 376 KEGARLEEARKTIGLREEHESITKKLSKATGMKRSEVDKILCKERESQERIIRSYRGLVV 197
           +EGARLE  R  +   EE E  +K+L+KA GMK   +DK+LCK+RESQERIIRSYRGL+V
Sbjct: 3   QEGARLESRRLRVVEAEEQEPTSKQLAKAMGMKTRSIDKVLCKKRESQERIIRSYRGLIV 62

Query: 196 SIATGYQGKGLSLQDLIQEGSMGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRAVQNKSR 17
           S+A+ YQGKGLS QDLIQEGS+GLLRGA++F+ ERG KLSTYVYWWI+QAIIRA++ KSR
Sbjct: 63  SVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHERGCKLSTYVYWWIRQAIIRALEKKSR 122

Query: 16  IIRLP 2
           IIRLP
Sbjct: 123 IIRLP 127