BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00015278
         (4066 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V sub...  2132   0.0  
ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citr...  2128   0.0  
ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V sub...  1623   0.0  
gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]     1623   0.0  
ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, put...  1622   0.0  
ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, put...  1622   0.0  
gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium r...  1607   0.0  
ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V sub...  1607   0.0  
ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V sub...  1604   0.0  
gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like pro...  1601   0.0  
gb|KJB67890.1| hypothetical protein B456_010G216600 [Gossypium r...  1593   0.0  
emb|CBI40152.3| unnamed protein product [Vitis vinifera]             1589   0.0  
ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V sub...  1589   0.0  
ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V sub...  1587   0.0  
ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V sub...  1585   0.0  
ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prun...  1584   0.0  
ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Popu...  1572   0.0  
ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V sub...  1567   0.0  
gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium r...  1552   0.0  
ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V sub...  1544   0.0  

>ref|XP_006470866.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Citrus
            sinensis]
          Length = 1865

 Score = 2132 bits (5523), Expect = 0.0
 Identities = 1104/1383 (79%), Positives = 1167/1383 (84%), Gaps = 29/1383 (2%)
 Frame = -1

Query: 4066 TMSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRD 3887
            TMSSDLS+AMLKKVLKQVEIIRSSRSGTPNFESQEVE+NDLQLAVGQYLEVRGTAKSSRD
Sbjct: 232  TMSSDLSIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRD 291

Query: 3886 VDAHYGTSQDPNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            VDA +G SQDPNS+TKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNEIGVPFEIAQRI
Sbjct: 292  VDARFGVSQDPNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRI 351

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVNVHNI YLQELVDNKLCLTY DGSSSYSLREGSKGHTFLRPGQVVHRRIMDGD 
Sbjct: 352  TFEERVNVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDT 411

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 412  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 471

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAF QQLAMF LSPLPRPAL
Sbjct: 472  LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFTQQLAMFALSPLPRPAL 531

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             KA CS   WTALQILQSVLP   D CGDRYLI KSEVLKGDFDRD I SVINEIVTSIF
Sbjct: 532  SKARCSA-RWTALQILQSVLPPGFDSCGDRYLIKKSEVLKGDFDRDTIPSVINEIVTSIF 590

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKGPEEV+EFFDSLQPLLMENLFADGFSVSLEDFSLSKAAL NI +EIQA++SLLYH  
Sbjct: 591  FEKGPEEVLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRM 650

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            STQNELV+LQIE+HIRHVK+LVAKFILKSSTLGYLI              AGFLGLQLSD
Sbjct: 651  STQNELVDLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSD 710

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVMV 2447
            +GKFYSKTLVED+ASHFERIYPMD NYPTAKYGLIKGCFFHGLDPYEE+ HSIS REV+V
Sbjct: 711  RGKFYSKTLVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIV 770

Query: 2446 RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEP 2267
            RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEP
Sbjct: 771  RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEP 830

Query: 2266 VGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCG 2087
            VGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCG
Sbjct: 831  VGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCG 890

Query: 2086 REYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLLE 1907
            R+YCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKP    E +  D GLVGHIHLNK+LLE
Sbjct: 891  RKYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKP----EIISDDEGLVGHIHLNKILLE 946

Query: 1906 ELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPCL 1727
            +L ISMH+ILPKCQET                   TSLSVSECCSFQQSCAD  SNMPCL
Sbjct: 947  DLRISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSVSECCSFQQSCADKRSNMPCL 1006

Query: 1726 MFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPSK 1547
            MFVL+  S+ SYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTT WIRNPSK
Sbjct: 1007 MFVLRGASD-SYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTAWIRNPSK 1065

Query: 1546 IQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISCA 1367
             +KGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLG+SCA
Sbjct: 1066 NRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCA 1125

Query: 1366 FERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFTE 1187
            FE+AVQRLSASVTMVAKG+LKEHLILLANSMTCAG+LVGFNSGGYKALSRSLN++VPFTE
Sbjct: 1126 FEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTE 1185

Query: 1186 ATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDGI 1007
            ATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFD+LW T+NE FNQ+DG+
Sbjct: 1186 ATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGV 1245

Query: 1006 DVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQSW 827
            DVY+FLHMVRSSTGI ESDTGCLGEEVD LEDE DWSLSPEHNL SDKPVFED VEDQSW
Sbjct: 1246 DVYDFLHMVRSSTGIEESDTGCLGEEVDGLEDEFDWSLSPEHNLCSDKPVFEDLVEDQSW 1305

Query: 826  LENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGTDA 647
            LENKQEN NW+                  SEA C KSSEDKWEKLGT +   SS W T+ 
Sbjct: 1306 LENKQENANWD------------------SEADCRKSSEDKWEKLGTSLEKPSSGWRTEG 1347

Query: 646  SWGKSSGDKLENVGSTTKPSSGWGTE-SWGKSSGDKQENVGRSDIKPSS------GWGKS 488
            +WGKSS DKLE  GS ++  SGWGTE SWG+SS DK ENVG    K  S       WGKS
Sbjct: 1348 AWGKSSDDKLEKAGSPSRKPSGWGTEASWGESSCDKWENVGSPAAKSFSEWGTEASWGKS 1407

Query: 487  SEEKMEKVGSPAKSSSEWGTEASWGKSSGDKLENVGSPATKPSSG------WGKSSGDKQ 326
              +K E V   AK+SS WG+EASWGKSSGD+ ENVG  A+KP SG      WGKSS DK 
Sbjct: 1408 FGDKPENVSPAAKTSSGWGSEASWGKSSGDRQENVGGSASKPLSGWGAKASWGKSSEDKL 1467

Query: 325  ENVGRSDINPSSGWGTKASWGKSSEEKMEKVGSPAKSS-SEWGTEASWGKSSGDKQE--- 158
            E V  +   PSS WGT+ASW KSSE  +EKV +PA++  S WGTEA     S D  E   
Sbjct: 1468 EEVETTVAKPSSAWGTEASWDKSSEVTLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWKD 1527

Query: 157  ------NVGSPATKPSSGWGKSSG------DKQENVGSSATKPSTGWGTRASWGKSSEEK 14
                  + G   ++ +SGW   +       DK ++VGS+    S+ WG R  +     E 
Sbjct: 1528 HANATASWGRNGSEENSGWDTKASWKTKALDKLDDVGSAVENSSSVWGAREDFSTKGWED 1587

Query: 13   MEK 5
              K
Sbjct: 1588 SSK 1590



 Score =  196 bits (497), Expect = 2e-46
 Identities = 108/194 (55%), Positives = 126/194 (64%), Gaps = 12/194 (6%)
 Frame = -1

Query: 547  DKQENVGRSDIKPSSGWGKSSEEKMEKVG-SPAKSSSEWGTEASWGKSSGDKLENVGSPA 371
            +KQEN         +   KSSE+K EK+G S  K SS W TE +WGKSS DKLE  GSP+
Sbjct: 1308 NKQENANWDS---EADCRKSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDKLEKAGSPS 1364

Query: 370  TKPS-----SGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEKVGSPAKSSSE 206
             KPS     + WG+SS DK ENVG       S WGT+ASWGKS  +K E V   AK+SS 
Sbjct: 1365 RKPSGWGTEASWGESSCDKWENVGSPAAKSFSEWGTEASWGKSFGDKPENVSPAAKTSSG 1424

Query: 205  WGTEASWGKSSGDKQENVGSPATKPSSGWG------KSSGDKQENVGSSATKPSTGWGTR 44
            WG+EASWGKSSGD+QENVG  A+KP SGWG      KSS DK E V ++  KPS+ WGT 
Sbjct: 1425 WGSEASWGKSSGDRQENVGGSASKPLSGWGAKASWGKSSEDKLEEVETTVAKPSSAWGTE 1484

Query: 43   ASWGKSSEEKMEKV 2
            ASW KSSE  +EKV
Sbjct: 1485 ASWDKSSEVTLEKV 1498


>ref|XP_006420718.1| hypothetical protein CICLE_v10004129mg [Citrus clementina]
            gi|557522591|gb|ESR33958.1| hypothetical protein
            CICLE_v10004129mg [Citrus clementina]
          Length = 1867

 Score = 2128 bits (5515), Expect = 0.0
 Identities = 1102/1384 (79%), Positives = 1167/1384 (84%), Gaps = 30/1384 (2%)
 Frame = -1

Query: 4066 TMSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRD 3887
            TMSSDLS+AMLKKVLKQVEIIRSSRSGTPNFESQEVE+NDLQLAVGQYLEVRGTAKSSRD
Sbjct: 232  TMSSDLSIAMLKKVLKQVEIIRSSRSGTPNFESQEVESNDLQLAVGQYLEVRGTAKSSRD 291

Query: 3886 VDAHYGTSQDPNSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            VDA +G SQDPNS+TKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNEIGVPFEIAQRI
Sbjct: 292  VDARFGVSQDPNSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGVPFEIAQRI 351

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVNVHNI YLQELVDNKLCLTY DGSSSYSLREGSKGHTFLRPGQVVHRRIMDGD 
Sbjct: 352  TFEERVNVHNINYLQELVDNKLCLTYSDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDT 411

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 412  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 471

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMF LSPLPRPAL
Sbjct: 472  LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFALSPLPRPAL 531

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             KAHCSGP WTALQILQSVLP   D CGDRYLI KSEVL GDFDRD I SVINEIVTSIF
Sbjct: 532  SKAHCSGPRWTALQILQSVLPPGFDSCGDRYLIKKSEVLNGDFDRDTIPSVINEIVTSIF 591

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKGPEEV+EFFDSLQPLLMENLFADGFSVSLEDFSLSKAAL NI +EIQA++SLLYH  
Sbjct: 592  FEKGPEEVLEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALWNIQKEIQALYSLLYHRM 651

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            STQNELV+LQIE+HIRHVK+LVAKFILKSSTLGYLI              AGFLGLQLSD
Sbjct: 652  STQNELVDLQIENHIRHVKMLVAKFILKSSTLGYLIDSKSDSAVSKVVQQAGFLGLQLSD 711

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVMV 2447
            +GKFYSKTLVED+ASHFERIYPMD NYPTAKYGLIKGCFFHGLDPYEE+ HSIS REV+V
Sbjct: 712  RGKFYSKTLVEDIASHFERIYPMDLNYPTAKYGLIKGCFFHGLDPYEEMTHSISTREVIV 771

Query: 2446 RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEP 2267
            RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEP
Sbjct: 772  RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEP 831

Query: 2266 VGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCG 2087
            VGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCG
Sbjct: 832  VGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCG 891

Query: 2086 REYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLLE 1907
            R+YCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKP    E +  D GLVGHIHLNK+LLE
Sbjct: 892  RKYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKP----EIISDDEGLVGHIHLNKILLE 947

Query: 1906 ELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPCL 1727
            +L ISMH+ILPKCQET                   TSLS+SECCSFQQSCAD  SNMPCL
Sbjct: 948  DLRISMHDILPKCQETLKSFCKKKKMKKVVQFFKNTSLSISECCSFQQSCADKRSNMPCL 1007

Query: 1726 MFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPSK 1547
            MFVL+  S+ SYLDKLSGVLANMIYPVLLETIIKGDPRI SANIIWISPDTT WIRNPSK
Sbjct: 1008 MFVLRGASD-SYLDKLSGVLANMIYPVLLETIIKGDPRICSANIIWISPDTTAWIRNPSK 1066

Query: 1546 IQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISCA 1367
             +KGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLG+SCA
Sbjct: 1067 NRKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGVSCA 1126

Query: 1366 FERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFTE 1187
            FE+AVQRLSASVTMVAKG+LKEHLILLANSMTCAG+LVGFNSGGYKALSRSLN++VPFTE
Sbjct: 1127 FEQAVQRLSASVTMVAKGVLKEHLILLANSMTCAGDLVGFNSGGYKALSRSLNVQVPFTE 1186

Query: 1186 ATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDGI 1007
            ATLF PRKCFEKAAEK HTDNLSSVVAACSWGKHVAVGTGSRFD+LW T+NE FNQ+DG+
Sbjct: 1187 ATLFMPRKCFEKAAEKRHTDNLSSVVAACSWGKHVAVGTGSRFDLLWQTENEEFNQDDGV 1246

Query: 1006 DVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQSW 827
            DVY+FLHMVRSSTGI E DTGCLGEEVD LEDE DWSLSPEHNL SDKP+FED VEDQSW
Sbjct: 1247 DVYDFLHMVRSSTGIEELDTGCLGEEVDGLEDEFDWSLSPEHNLCSDKPIFEDLVEDQSW 1306

Query: 826  LENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGTDA 647
            LENKQEN NW+                  SEA C KSSEDKWEKLGT +   SS W T+ 
Sbjct: 1307 LENKQENENWD------------------SEADCRKSSEDKWEKLGTSLEKPSSGWRTEG 1348

Query: 646  SWGKSSGDKLENVGSTTKPSSGWGTE-SWGKSSGDKQENVGRSDIKPSS------GWGKS 488
            +WGKSS DKLE  GS ++  SGWGTE SWG+SS DK ENVG    K  S       WGKS
Sbjct: 1349 AWGKSSDDKLEKAGSPSRKPSGWGTEASWGESSSDKWENVGSPAAKSFSEWGTEASWGKS 1408

Query: 487  SEEKMEKVGSP-AKSSSEWGTEASWGKSSGDKLENVGSPATKPSSG------WGKSSGDK 329
              +K E V SP AK+SS WG+EASWGKS GD+ ENVG  A+KP SG      WGKSS DK
Sbjct: 1409 FGDKPENVRSPAAKTSSGWGSEASWGKSPGDRQENVGRSASKPLSGWGAKASWGKSSEDK 1468

Query: 328  QENVGRSDINPSSGWGTKASWGKSSEEKMEKVGSPAKSS-SEWGTEASWGKSSGDKQE-- 158
             E V  +   PSS WGT+ASW KSSE  +EKV +PA++  S WGTEA     S D  E  
Sbjct: 1469 LEEVETTVAKPSSAWGTEASWDKSSEVTLEKVAAPAENPLSGWGTEAQDSGKSSDWSEWK 1528

Query: 157  -------NVGSPATKPSSGWGKSSG------DKQENVGSSATKPSTGWGTRASWGKSSEE 17
                   + G   ++ +SGW   +       DK ++VGS+    S+ WG R  +     E
Sbjct: 1529 DHANATASWGRNGSEENSGWDTKASWNTKALDKLDDVGSAVENSSSVWGAREDFSTKGWE 1588

Query: 16   KMEK 5
               K
Sbjct: 1589 DSSK 1592



 Score =  194 bits (493), Expect = 6e-46
 Identities = 108/203 (53%), Positives = 131/203 (64%), Gaps = 13/203 (6%)
 Frame = -1

Query: 571  ESWGKSSGDKQENVGRSDIKPSSGWGKSSEEKMEKVG-SPAKSSSEWGTEASWGKSSGDK 395
            +SW ++  + +     +D +      KSSE+K EK+G S  K SS W TE +WGKSS DK
Sbjct: 1304 QSWLENKQENENWDSEADCR------KSSEDKWEKLGTSLEKPSSGWRTEGAWGKSSDDK 1357

Query: 394  LENVGSPATKPS-----SGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEKVG 230
            LE  GSP+ KPS     + WG+SS DK ENVG       S WGT+ASWGKS  +K E V 
Sbjct: 1358 LEKAGSPSRKPSGWGTEASWGESSSDKWENVGSPAAKSFSEWGTEASWGKSFGDKPENVR 1417

Query: 229  SPA-KSSSEWGTEASWGKSSGDKQENVGSPATKPSSGWG------KSSGDKQENVGSSAT 71
            SPA K+SS WG+EASWGKS GD+QENVG  A+KP SGWG      KSS DK E V ++  
Sbjct: 1418 SPAAKTSSGWGSEASWGKSPGDRQENVGRSASKPLSGWGAKASWGKSSEDKLEEVETTVA 1477

Query: 70   KPSTGWGTRASWGKSSEEKMEKV 2
            KPS+ WGT ASW KSSE  +EKV
Sbjct: 1478 KPSSAWGTEASWDKSSEVTLEKV 1500


>ref|XP_012068654.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Jatropha curcas]
          Length = 1980

 Score = 1623 bits (4203), Expect = 0.0
 Identities = 871/1393 (62%), Positives = 1028/1393 (73%), Gaps = 45/1393 (3%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS++MLKKVLKQVEII+SSRSG+PNFES EVEA DLQ AV QYL+VRGTAK SRDV
Sbjct: 241  MSSDLSISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDV 300

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            ++ +G  ++ N SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNEIG+PFEIAQRI
Sbjct: 301  ESRFGIHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRI 360

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERV+VHN+KYLQELVDNKLC+TYRDGSS+YSLR+GSKGHTFLRPGQVVHRRIMDGD 
Sbjct: 361  TFEERVSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDT 420

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDC+HLFYPQSLAAKAEV
Sbjct: 421  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEV 480

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+GNLNLQL TD+LLSLK MFK YFLD+A AQQLAMFV   LP+P L
Sbjct: 481  LELFSVEKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTL 540

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
            WK   S P WT LQILQ+ LP+  DC G+RY I K +++K DF RD++QSVINEIV SIF
Sbjct: 541  WKVPYSDPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIF 600

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKGP+ V +FF+SLQPLLMENLF++GFSV LED  +S+A +++IH++ + I  LL   R
Sbjct: 601  FEKGPDAVFKFFNSLQPLLMENLFSEGFSVCLEDLYISRAVIESIHKDFKVISPLLSQLR 660

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR VK+ VA+FI++SS++G LI               GFLGLQ+SD
Sbjct: 661  STYNELVELQLENHIRQVKLRVAEFIVRSSSIGDLIDYKSDSAMTKVVQQIGFLGLQISD 720

Query: 2626 KGKFYSKTLVEDVASHFERIYPMD-PNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            +GKFYSKTLVED+ SHFER YP +   YP+A+YGLI+ CFFHGLDPYEE+VHSIS REV+
Sbjct: 721  RGKFYSKTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVI 780

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNAR-KSHSLFPAG 2273
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQF+Y V A  K+ SLFPAG
Sbjct: 781  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAGIKAQSLFPAG 840

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLCRV+F ND  DRR+ILYLNDCG
Sbjct: 841  EPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRIILYLNDCG 900

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR YCQE+AAY VKN L++V LKD A  F+IEYK+  T+      DVGL GHIHL+KM 
Sbjct: 901  CGRNYCQEKAAYKVKNHLQKVILKDIANHFMIEYKRQHTI-----ADVGLAGHIHLDKMK 955

Query: 1912 LEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMP 1733
            LE L +SM  I  KC ET                  +  +S S+CCSFQ+SCAD+ S  P
Sbjct: 956  LENLKVSMEVIHQKCTET---VNFFRKKKKLALFFKRIEVSASQCCSFQESCADEWSGSP 1012

Query: 1732 CLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNP 1553
            CL F  Q++  +  ++++S + A+MI PVLLET+IKGD RI +ANI WISPDTTTWIRNP
Sbjct: 1013 CLTFFWQDS--DIRIERISNLFADMICPVLLETVIKGDHRISNANITWISPDTTTWIRNP 1070

Query: 1552 SKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGIS 1373
            S+ QKGELALDVV+EKS VKQSGDAWR VLDSCLPV HLIDT RS+PYAIKQ+QELLG+S
Sbjct: 1071 SRTQKGELALDVVIEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVS 1130

Query: 1372 CAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPF 1193
            CAF++AVQRLS SVT+VAKG+LKEHLILLANSMTCAGNLVGFNSGGYK+LSRSL+++VPF
Sbjct: 1131 CAFDQAVQRLSTSVTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPF 1190

Query: 1192 TEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQED 1013
            T+ATLFTPRKCFE+AAEKCH D LSS+VA+CSWGK+VAVGTGSRFDVLWD K    +QE 
Sbjct: 1191 TDATLFTPRKCFERAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEG 1250

Query: 1012 GIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEI-DWSLSPEHNLSSDKPVFEDFV 842
             IDVY FL+MVR S    ES T CLG +VD  ML+D + DW+LSPEHN  SDKP FED  
Sbjct: 1251 SIDVYEFLNMVRCSANGEES-TACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRA 1309

Query: 841  EDQSWLENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSE 662
            E Q+ L+N  +  +WE+ S   +   S + G W  +       E+ W   G   A + + 
Sbjct: 1310 EFQNCLDN--QPADWEKASY--AVNGSSSGGNWGGDKNMETDKENSWSGWGRNAAETQNA 1365

Query: 661  WGTDASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKPSSGWG---- 494
              T A       +  +  G       GW  ++ GK+    + NV  +D    SGWG    
Sbjct: 1366 LSTKAHEESDKSNSWDTAG-------GWQAQANGKA----ENNVAETD--SWSGWGTRKT 1412

Query: 493  KSSEEKMEKVGSPAKSSSEWGTEASWGKS-SGDKLENVGSPATKPSSGWGKSSGD----- 332
            +SS+   +KV   ++ S  W T+A+W  + SG   ++V  P +   SGW     +     
Sbjct: 1413 ESSDVPAKKVQEESEHSIGWDTKAAWQTNISGGTPKSVPEPDS--WSGWETRKNEVPDDH 1470

Query: 331  ---KQENVGR-SDINPSSGWGTKA-----SWGKSSEEKME-KVGSP-----AKSSSEWGT 197
                QE  GR  D +  + WG +A     SWGK    ++    G+P     A S   W  
Sbjct: 1471 GRKAQEETGRPGDHDAGAAWGRRAEVDDNSWGKPKSPQVSLSWGTPKEPVNAGSLRGWDL 1530

Query: 196  EASWGKSSGDKQENVG-SPATKPSSGWG------KSSGDKQENV-GSSATKPSTGWGTRA 41
              + G +  + Q   G S   + S GWG      K++G  Q N  GS ATK    W    
Sbjct: 1531 PKAGGSNGSEIQPQWGKSKPPEGSHGWGSSNEPVKAAGWNQPNAGGSDATKRQQQWEKPK 1590

Query: 40   S------WGKSSE 20
            S      WG S E
Sbjct: 1591 SPEASHGWGPSKE 1603


>gb|KDP40529.1| hypothetical protein JCGZ_24528 [Jatropha curcas]
          Length = 1821

 Score = 1623 bits (4203), Expect = 0.0
 Identities = 871/1393 (62%), Positives = 1028/1393 (73%), Gaps = 45/1393 (3%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS++MLKKVLKQVEII+SSRSG+PNFES EVEA DLQ AV QYL+VRGTAK SRDV
Sbjct: 82   MSSDLSISMLKKVLKQVEIIKSSRSGSPNFESHEVEAIDLQSAVDQYLQVRGTAKGSRDV 141

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            ++ +G  ++ N SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNEIG+PFEIAQRI
Sbjct: 142  ESRFGIHKESNDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGIPFEIAQRI 201

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERV+VHN+KYLQELVDNKLC+TYRDGSS+YSLR+GSKGHTFLRPGQVVHRRIMDGD 
Sbjct: 202  TFEERVSVHNVKYLQELVDNKLCMTYRDGSSTYSLRDGSKGHTFLRPGQVVHRRIMDGDT 261

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDC+HLFYPQSLAAKAEV
Sbjct: 262  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEV 321

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+GNLNLQL TD+LLSLK MFK YFLD+A AQQLAMFV   LP+P L
Sbjct: 322  LELFSVEKQLLSSHSGNLNLQLTTDSLLSLKSMFKAYFLDRAAAQQLAMFVSFSLPQPTL 381

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
            WK   S P WT LQILQ+ LP+  DC G+RY I K +++K DF RD++QSVINEIV SIF
Sbjct: 382  WKVPYSDPIWTVLQILQTALPSQFDCTGERYFISKGDIIKIDFSRDVVQSVINEIVISIF 441

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKGP+ V +FF+SLQPLLMENLF++GFSV LED  +S+A +++IH++ + I  LL   R
Sbjct: 442  FEKGPDAVFKFFNSLQPLLMENLFSEGFSVCLEDLYISRAVIESIHKDFKVISPLLSQLR 501

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR VK+ VA+FI++SS++G LI               GFLGLQ+SD
Sbjct: 502  STYNELVELQLENHIRQVKLRVAEFIVRSSSIGDLIDYKSDSAMTKVVQQIGFLGLQISD 561

Query: 2626 KGKFYSKTLVEDVASHFERIYPMD-PNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            +GKFYSKTLVED+ SHFER YP +   YP+A+YGLI+ CFFHGLDPYEE+VHSIS REV+
Sbjct: 562  RGKFYSKTLVEDMVSHFERKYPSEVVEYPSAQYGLIQSCFFHGLDPYEEMVHSISTREVI 621

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNAR-KSHSLFPAG 2273
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQF+Y V A  K+ SLFPAG
Sbjct: 622  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKAGIKAQSLFPAG 681

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLCRV+F ND  DRR+ILYLNDCG
Sbjct: 682  EPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCRVNFKNDLTDRRIILYLNDCG 741

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR YCQE+AAY VKN L++V LKD A  F+IEYK+  T+      DVGL GHIHL+KM 
Sbjct: 742  CGRNYCQEKAAYKVKNHLQKVILKDIANHFMIEYKRQHTI-----ADVGLAGHIHLDKMK 796

Query: 1912 LEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMP 1733
            LE L +SM  I  KC ET                  +  +S S+CCSFQ+SCAD+ S  P
Sbjct: 797  LENLKVSMEVIHQKCTET---VNFFRKKKKLALFFKRIEVSASQCCSFQESCADEWSGSP 853

Query: 1732 CLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNP 1553
            CL F  Q++  +  ++++S + A+MI PVLLET+IKGD RI +ANI WISPDTTTWIRNP
Sbjct: 854  CLTFFWQDS--DIRIERISNLFADMICPVLLETVIKGDHRISNANITWISPDTTTWIRNP 911

Query: 1552 SKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGIS 1373
            S+ QKGELALDVV+EKS VKQSGDAWR VLDSCLPV HLIDT RS+PYAIKQ+QELLG+S
Sbjct: 912  SRTQKGELALDVVIEKSAVKQSGDAWRIVLDSCLPVLHLIDTTRSIPYAIKQIQELLGVS 971

Query: 1372 CAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPF 1193
            CAF++AVQRLS SVT+VAKG+LKEHLILLANSMTCAGNLVGFNSGGYK+LSRSL+++VPF
Sbjct: 972  CAFDQAVQRLSTSVTIVAKGVLKEHLILLANSMTCAGNLVGFNSGGYKSLSRSLDVQVPF 1031

Query: 1192 TEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQED 1013
            T+ATLFTPRKCFE+AAEKCH D LSS+VA+CSWGK+VAVGTGSRFDVLWD K    +QE 
Sbjct: 1032 TDATLFTPRKCFERAAEKCHVDTLSSIVASCSWGKNVAVGTGSRFDVLWDKKEACLDQEG 1091

Query: 1012 GIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEI-DWSLSPEHNLSSDKPVFEDFV 842
             IDVY FL+MVR S    ES T CLG +VD  ML+D + DW+LSPEHN  SDKP FED  
Sbjct: 1092 SIDVYEFLNMVRCSANGEES-TACLGADVDDLMLDDGMDDWNLSPEHNFGSDKPTFEDRA 1150

Query: 841  EDQSWLENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSE 662
            E Q+ L+N  +  +WE+ S   +   S + G W  +       E+ W   G   A + + 
Sbjct: 1151 EFQNCLDN--QPADWEKASY--AVNGSSSGGNWGGDKNMETDKENSWSGWGRNAAETQNA 1206

Query: 661  WGTDASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKPSSGWG---- 494
              T A       +  +  G       GW  ++ GK+    + NV  +D    SGWG    
Sbjct: 1207 LSTKAHEESDKSNSWDTAG-------GWQAQANGKA----ENNVAETD--SWSGWGTRKT 1253

Query: 493  KSSEEKMEKVGSPAKSSSEWGTEASWGKS-SGDKLENVGSPATKPSSGWGKSSGD----- 332
            +SS+   +KV   ++ S  W T+A+W  + SG   ++V  P +   SGW     +     
Sbjct: 1254 ESSDVPAKKVQEESEHSIGWDTKAAWQTNISGGTPKSVPEPDS--WSGWETRKNEVPDDH 1311

Query: 331  ---KQENVGR-SDINPSSGWGTKA-----SWGKSSEEKME-KVGSP-----AKSSSEWGT 197
                QE  GR  D +  + WG +A     SWGK    ++    G+P     A S   W  
Sbjct: 1312 GRKAQEETGRPGDHDAGAAWGRRAEVDDNSWGKPKSPQVSLSWGTPKEPVNAGSLRGWDL 1371

Query: 196  EASWGKSSGDKQENVG-SPATKPSSGWG------KSSGDKQENV-GSSATKPSTGWGTRA 41
              + G +  + Q   G S   + S GWG      K++G  Q N  GS ATK    W    
Sbjct: 1372 PKAGGSNGSEIQPQWGKSKPPEGSHGWGSSNEPVKAAGWNQPNAGGSDATKRQQQWEKPK 1431

Query: 40   S------WGKSSE 20
            S      WG S E
Sbjct: 1432 SPEASHGWGPSKE 1444


>ref|XP_007011001.1| DNA-directed RNA polymerase E subunit 1, putative isoform 3
            [Theobroma cacao] gi|508727914|gb|EOY19811.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            3 [Theobroma cacao]
          Length = 1675

 Score = 1622 bits (4199), Expect = 0.0
 Identities = 876/1403 (62%), Positives = 1017/1403 (72%), Gaps = 50/1403 (3%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS AMLKKVLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR++
Sbjct: 231  MSSDLSTAMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNI 290

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG S+D + SSTKAWLEKMRTLFIRKGSGFSSR VITGD YKKVNEIG+P EIAQRI
Sbjct: 291  DARYGISKDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRI 350

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDGSS+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 351  TFEERVNMHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 410

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 411  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 470

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSHNGNLNLQLATD+LLSL+VM K     KA AQQL+MF+ S LP+PA 
Sbjct: 471  FELFSVEKQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAF 530

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +  GP WTALQILQ+  PACLDC GDRYLI KS++L  DF RD++QSVINE+VTSIF
Sbjct: 531  LKGNSFGPCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIF 590

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKGP+EV+ FFDSLQPLLMEN+FA+GFSVSLEDFS+S+  +QNI ++IQ I  LLY  R
Sbjct: 591  FEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLR 650

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELV LQ+E+HIR  K  VA FIL SS LG LI               GFLGLQLS+
Sbjct: 651  STYNELVGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSN 710

Query: 2626 KGKFYSKTLVEDVASHFERIYPMD-PNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFFHGLDPYE +VHSIS REV+
Sbjct: 711  KGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVI 770

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRN+ SNSIIQF Y +NAR +   FPAGE
Sbjct: 771  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNAR-TKPQFPAGE 829

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLC+VS  ND +DRRVILYL DC C
Sbjct: 830  PVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDC 889

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L++V LKD AVE + EYK+ QTV ES   + GLVGHI LNK +L
Sbjct: 890  GRKYCQENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSES---EAGLVGHILLNKAVL 946

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL+ISM E+  KCQET                  +T L  SECCS QQSC     +M C
Sbjct: 947  KELNISMQEVHMKCQET---IISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSC 1003

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T ++ +LD     L ++IYPVLLET+IKGDPRI SANIIW+SPDTTTWIR+PS
Sbjct: 1004 LMFFCRNTKDD-HLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPS 1062

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELALDVVLEKS VKQ+GDAWRTV+D CLPV +LIDT+RS+PYAIKQVQELLGISC
Sbjct: 1063 KTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISC 1122

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MVA+G+LKEHLILLANSMTCAGNL+GFNSGGYKALSRSLNI+VPF+
Sbjct: 1123 AFEQAVQRLSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFS 1182

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDG 1010
            EATLFTPRKCFE+AAEKCH D+LSS+VA+CSWGKHVAVGTGSRFDVLWD K  GF+Q+ G
Sbjct: 1183 EATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSG 1242

Query: 1009 IDVYNFLHMVRSSTGIVESDTGCLGEEVDMLED---EIDWSLSPEHNLSSDKPVFEDFVE 839
            IDVYNFLHM+ S++G   S T CLGEEVD L D     +WSLSPEH+   DKPVFED  +
Sbjct: 1243 IDVYNFLHMLSSASG-PSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAAD 1301

Query: 838  DQSWLENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSS--S 665
             ++ L+ +   ++WE+  +       D    WN  +A  K +ED  +K    + +++  S
Sbjct: 1302 FENDLDFQPAESSWEKGVS------LDKVSSWNVSSAWNKKAED-GDKFAAALTSTTKQS 1354

Query: 664  EWGTDASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQE----NVGRSDIKPSSGW 497
            +W     WG S     +   + T  +       WG S    QE      G ++      W
Sbjct: 1355 DW---CDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQEVAATVTGTAEQNEWCDW 1411

Query: 496  GKSSEEKMEKVGSPAKSSS------EWGTEAS-------------------WGKSS---- 404
             ++S+ K++ V +   S++      +WGT  S                   WGK      
Sbjct: 1412 -RTSKSKIQVVAAAVTSTTKQSEWGDWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQ 1470

Query: 403  --GDKLENVGSPATKPSSGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEKVG 230
                K++          S WG    D Q+         S+G  T  SWG   +E  +   
Sbjct: 1471 DVSPKVDGTCVNEQTKLSDWGLKKNDTQDVSMEEKTFKSNGADTGTSWGTMGKESEKPDA 1530

Query: 229  SPAKSSSEWGTE--------ASWGKSSGDKQENVGSPATKPSSGWGKSSGDKQENVGSSA 74
            + A   S WGT+            KSSG +Q+     + + S GWG      Q       
Sbjct: 1531 NDALPWSGWGTQDVIPTKTLDDSSKSSGWEQQK----SPECSQGWGSLDESNQ------- 1579

Query: 73   TKPSTGWGTRASWGKSSEEKMEK 5
               S GW T    G +  EK  +
Sbjct: 1580 PASSNGWDTPNGLGSTQSEKQHQ 1602


>ref|XP_007010999.1| DNA-directed RNA polymerase E subunit 1, putative isoform 1
            [Theobroma cacao] gi|590569189|ref|XP_007011000.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727912|gb|EOY19809.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao] gi|508727913|gb|EOY19810.1|
            DNA-directed RNA polymerase E subunit 1, putative isoform
            1 [Theobroma cacao]
          Length = 1788

 Score = 1622 bits (4199), Expect = 0.0
 Identities = 876/1403 (62%), Positives = 1017/1403 (72%), Gaps = 50/1403 (3%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS AMLKKVLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR++
Sbjct: 231  MSSDLSTAMLKKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRNI 290

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG S+D + SSTKAWLEKMRTLFIRKGSGFSSR VITGD YKKVNEIG+P EIAQRI
Sbjct: 291  DARYGISKDASDSSTKAWLEKMRTLFIRKGSGFSSRGVITGDPYKKVNEIGIPSEIAQRI 350

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDGSS+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 351  TFEERVNMHNMRYLQNLVDNKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 410

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 411  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 470

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSHNGNLNLQLATD+LLSL+VM K     KA AQQL+MF+ S LP+PA 
Sbjct: 471  FELFSVEKQLLSSHNGNLNLQLATDSLLSLRVMLKTLLFKKADAQQLSMFLSSALPQPAF 530

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +  GP WTALQILQ+  PACLDC GDRYLI KS++L  DF RD++QSVINE+VTSIF
Sbjct: 531  LKGNSFGPCWTALQILQTAFPACLDCSGDRYLISKSDILTVDFSRDLMQSVINEVVTSIF 590

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKGP+EV+ FFDSLQPLLMEN+FA+GFSVSLEDFS+S+  +QNI ++IQ I  LLY  R
Sbjct: 591  FEKGPKEVLNFFDSLQPLLMENVFAEGFSVSLEDFSVSREVIQNIQKDIQDISPLLYQLR 650

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELV LQ+E+HIR  K  VA FIL SS LG LI               GFLGLQLS+
Sbjct: 651  STYNELVGLQMENHIRVAKAPVANFILNSSALGDLIDSKSDSTVNKVVQQIGFLGLQLSN 710

Query: 2626 KGKFYSKTLVEDVASHFERIYPMD-PNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFFHGLDPYE +VHSIS REV+
Sbjct: 711  KGKFYSKTLVEDVAYQFQSIYPSDGVDYPSAEFGLIKSCFFHGLDPYEGMVHSISTREVI 770

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRN+ SNSIIQF Y +NAR +   FPAGE
Sbjct: 771  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNISSNSIIQFQYGLNAR-TKPQFPAGE 829

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLC+VS  ND +DRRVILYL DC C
Sbjct: 830  PVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVSLKNDLVDRRVILYLKDCDC 889

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L++V LKD AVE + EYK+ QTV ES   + GLVGHI LNK +L
Sbjct: 890  GRKYCQENAAYLVKNHLRKVKLKDTAVELIFEYKQQQTVSES---EAGLVGHILLNKAVL 946

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL+ISM E+  KCQET                  +T L  SECCS QQSC     +M C
Sbjct: 947  KELNISMQEVHMKCQET---IISFRKKKKTADTFKRTDLFFSECCSIQQSCGGKWLDMSC 1003

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T ++ +LD     L ++IYPVLLET+IKGDPRI SANIIW+SPDTTTWIR+PS
Sbjct: 1004 LMFFCRNTKDD-HLDCTLQDLVDIIYPVLLETVIKGDPRICSANIIWVSPDTTTWIRSPS 1062

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELALDVVLEKS VKQ+GDAWRTV+D CLPV +LIDT+RS+PYAIKQVQELLGISC
Sbjct: 1063 KTQKGELALDVVLEKSAVKQNGDAWRTVIDCCLPVINLIDTQRSIPYAIKQVQELLGISC 1122

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MVA+G+LKEHLILLANSMTCAGNL+GFNSGGYKALSRSLNI+VPF+
Sbjct: 1123 AFEQAVQRLSTSVSMVARGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRSLNIQVPFS 1182

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDG 1010
            EATLFTPRKCFE+AAEKCH D+LSS+VA+CSWGKHVAVGTGSRFDVLWD K  GF+Q+ G
Sbjct: 1183 EATLFTPRKCFERAAEKCHVDSLSSIVASCSWGKHVAVGTGSRFDVLWDRKEVGFDQKSG 1242

Query: 1009 IDVYNFLHMVRSSTGIVESDTGCLGEEVDMLED---EIDWSLSPEHNLSSDKPVFEDFVE 839
            IDVYNFLHM+ S++G   S T CLGEEVD L D     +WSLSPEH+   DKPVFED  +
Sbjct: 1243 IDVYNFLHMLSSASG-PSSTTTCLGEEVDDLMDVDNMAEWSLSPEHSNGLDKPVFEDAAD 1301

Query: 838  DQSWLENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSS--S 665
             ++ L+ +   ++WE+  +       D    WN  +A  K +ED  +K    + +++  S
Sbjct: 1302 FENDLDFQPAESSWEKGVS------LDKVSSWNVSSAWNKKAED-GDKFAAALTSTTKQS 1354

Query: 664  EWGTDASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQE----NVGRSDIKPSSGW 497
            +W     WG S     +   + T  +       WG S    QE      G ++      W
Sbjct: 1355 DW---CDWGTSKSKTQDAAAAATSTTKKTEWCDWGTSKSKTQEVAATVTGTAEQNEWCDW 1411

Query: 496  GKSSEEKMEKVGSPAKSSS------EWGTEAS-------------------WGKSS---- 404
             ++S+ K++ V +   S++      +WGT  S                   WGK      
Sbjct: 1412 -RTSKSKIQVVAAAVTSTTKQSEWGDWGTSKSKTQDVAAAVTGTMETEWGDWGKGKSKTQ 1470

Query: 403  --GDKLENVGSPATKPSSGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEKVG 230
                K++          S WG    D Q+         S+G  T  SWG   +E  +   
Sbjct: 1471 DVSPKVDGTCVNEQTKLSDWGLKKNDTQDVSMEEKTFKSNGADTGTSWGTMGKESEKPDA 1530

Query: 229  SPAKSSSEWGTE--------ASWGKSSGDKQENVGSPATKPSSGWGKSSGDKQENVGSSA 74
            + A   S WGT+            KSSG +Q+     + + S GWG      Q       
Sbjct: 1531 NDALPWSGWGTQDVIPTKTLDDSSKSSGWEQQK----SPECSQGWGSLDESNQ------- 1579

Query: 73   TKPSTGWGTRASWGKSSEEKMEK 5
               S GW T    G +  EK  +
Sbjct: 1580 PASSNGWDTPNGLGSTQSEKQHQ 1602


>gb|KJB67889.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1883

 Score = 1607 bits (4160), Expect = 0.0
 Identities = 861/1362 (63%), Positives = 1016/1362 (74%), Gaps = 15/1362 (1%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS +ML+KVLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR +
Sbjct: 230  MSSDLSTSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSI 289

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG ++D + SSTKAWLEKMRTLFIRKGSGFSSRSVITGD YKKVNEIG+P EIAQRI
Sbjct: 290  DARYGVNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRI 349

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 350  TFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 409

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSL+AKAEV
Sbjct: 410  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEV 469

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSH+GNLNLQLATD+LLSL+VM K +   KA AQQL+MF+ S LP PA 
Sbjct: 470  YELFSVEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAF 529

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +   P WTA QILQ+  PACLDC  DRYLI KS++LK DF++D++QSVINE+V SIF
Sbjct: 530  LKCNHVAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIF 589

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            +EKGP+EV+ FFDSLQPLLMEN+FA+GF+V LEDFS+S+  ++NI ++IQ I  LLY  R
Sbjct: 590  YEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLR 649

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR  K  +A FILK+S+LG LI               GFLG+QLSD
Sbjct: 650  STYNELVELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSD 709

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFF GLDPYE IVHSIS REVM
Sbjct: 710  KGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVM 769

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRS+RGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF Y ++AR +   FPAGE
Sbjct: 770  VRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSAR-TRPQFPAGE 828

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+VSF NDPIDRRVILYL DC C
Sbjct: 829  PVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDC 888

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L+RV LKD AV+F+IEY++ Q V E    + GLVGHI LNK LL
Sbjct: 889  GRKYCQENAAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLL 945

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL +S+ EI  KCQET                   T L VSE CS QQSC D   +MPC
Sbjct: 946  KELSVSVQEIHMKCQETINSFRKKKKTAETFKR---TDLFVSESCSIQQSCVDKWLDMPC 1002

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T++++ LD    +LA++IYPVLL+T+IKGDPRI SA IIW++PD TTWIRNPS
Sbjct: 1003 LMFFFRNTNDDN-LDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPS 1061

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELAL+VVLEKS VKQ+GDAWRTV+D CLPV ++IDT RS+PYAIKQV++LLGISC
Sbjct: 1062 KTQKGELALEVVLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISC 1121

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MV +G+LKEHL+LLANSMTC GNL+GFNSGGYK LSRSLNI+VPFT
Sbjct: 1122 AFEQAVQRLSTSVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFT 1181

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDG 1010
            EATLFTPRKCFE+AAEKC+ D+LSS+VA+CSWGK VAVGTGSRFD+LW+ ++ G +Q  G
Sbjct: 1182 EATLFTPRKCFERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQES-GSDQMSG 1240

Query: 1009 IDVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQS 830
            +DVYNFLHMV S  G   S+T CLGEEVD L DE  W LSP+H+   DKPVFED  E ++
Sbjct: 1241 MDVYNFLHMV-SGAGGSNSNTACLGEEVDDLMDE--WCLSPDHSTGLDKPVFEDAAEFEN 1297

Query: 829  WLENKQENTNWE-EVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGT 653
             L+ +  + NWE +VS +          GWN  A       DK+    T  +   +EW  
Sbjct: 1298 NLDGQSASANWEKDVSLDKVSDVGWDASGWNKNA----EDVDKFAAAATS-SEKQNEW-- 1350

Query: 652  DASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKPS--SGWGKSSEE 479
             + WG S  +  ++VG      SGW   +     GDK      S  K +  S WG +S+ 
Sbjct: 1351 -SGWGASKSNS-QDVGWDAL--SGWNKNA---EDGDKFAAAATSSKKQNECSDWG-ASKS 1402

Query: 478  KMEKVGSPAKSSSEWGTEASWGKSS--GDKLENVGSPATKPS--SGWGKSSGDKQENVGR 311
            K + V SP K    W   ++W K++  GD      S + K S  S WG S    Q+   +
Sbjct: 1403 KSQDVVSP-KVDVGWDALSAWHKNAEDGDNFAAAASSSKKQSEWSDWGMSKSKSQDVSPK 1461

Query: 310  SD------INPSSGWGTKASWGKSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKQENVG 149
            +D          SGW  K    K     +  V   A   + W + ASWG  S + +E + 
Sbjct: 1462 TDGTCMKEQTELSGWEMK----KFDTRDVLPVEERASKPNGWDSGASWGIMSKESEE-LD 1516

Query: 148  SPATKPSSGWGKSSGDKQENVGSSATKPSTGWGTRASWGKSS 23
            + A  P SGWG      ++++    T  S+ W T +SWG+ +
Sbjct: 1517 ASAAAPWSGWGTKDSSPKKSLDK--TSKSSSWDTVSSWGRKT 1556


>ref|XP_012449583.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X1
            [Gossypium raimondii] gi|763800932|gb|KJB67887.1|
            hypothetical protein B456_010G216600 [Gossypium
            raimondii]
          Length = 1966

 Score = 1607 bits (4160), Expect = 0.0
 Identities = 861/1362 (63%), Positives = 1016/1362 (74%), Gaps = 15/1362 (1%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS +ML+KVLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR +
Sbjct: 230  MSSDLSTSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSI 289

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG ++D + SSTKAWLEKMRTLFIRKGSGFSSRSVITGD YKKVNEIG+P EIAQRI
Sbjct: 290  DARYGVNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRI 349

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 350  TFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 409

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSL+AKAEV
Sbjct: 410  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEV 469

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSH+GNLNLQLATD+LLSL+VM K +   KA AQQL+MF+ S LP PA 
Sbjct: 470  YELFSVEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAF 529

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +   P WTA QILQ+  PACLDC  DRYLI KS++LK DF++D++QSVINE+V SIF
Sbjct: 530  LKCNHVAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIF 589

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            +EKGP+EV+ FFDSLQPLLMEN+FA+GF+V LEDFS+S+  ++NI ++IQ I  LLY  R
Sbjct: 590  YEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLR 649

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR  K  +A FILK+S+LG LI               GFLG+QLSD
Sbjct: 650  STYNELVELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSD 709

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFF GLDPYE IVHSIS REVM
Sbjct: 710  KGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVM 769

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRS+RGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF Y ++AR +   FPAGE
Sbjct: 770  VRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSAR-TRPQFPAGE 828

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+VSF NDPIDRRVILYL DC C
Sbjct: 829  PVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDC 888

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L+RV LKD AV+F+IEY++ Q V E    + GLVGHI LNK LL
Sbjct: 889  GRKYCQENAAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLL 945

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL +S+ EI  KCQET                   T L VSE CS QQSC D   +MPC
Sbjct: 946  KELSVSVQEIHMKCQETINSFRKKKKTAETFKR---TDLFVSESCSIQQSCVDKWLDMPC 1002

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T++++ LD    +LA++IYPVLL+T+IKGDPRI SA IIW++PD TTWIRNPS
Sbjct: 1003 LMFFFRNTNDDN-LDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPS 1061

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELAL+VVLEKS VKQ+GDAWRTV+D CLPV ++IDT RS+PYAIKQV++LLGISC
Sbjct: 1062 KTQKGELALEVVLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISC 1121

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MV +G+LKEHL+LLANSMTC GNL+GFNSGGYK LSRSLNI+VPFT
Sbjct: 1122 AFEQAVQRLSTSVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFT 1181

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDG 1010
            EATLFTPRKCFE+AAEKC+ D+LSS+VA+CSWGK VAVGTGSRFD+LW+ ++ G +Q  G
Sbjct: 1182 EATLFTPRKCFERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQES-GSDQMSG 1240

Query: 1009 IDVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQS 830
            +DVYNFLHMV S  G   S+T CLGEEVD L DE  W LSP+H+   DKPVFED  E ++
Sbjct: 1241 MDVYNFLHMV-SGAGGSNSNTACLGEEVDDLMDE--WCLSPDHSTGLDKPVFEDAAEFEN 1297

Query: 829  WLENKQENTNWE-EVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGT 653
             L+ +  + NWE +VS +          GWN  A       DK+    T  +   +EW  
Sbjct: 1298 NLDGQSASANWEKDVSLDKVSDVGWDASGWNKNA----EDVDKFAAAATS-SEKQNEW-- 1350

Query: 652  DASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKPS--SGWGKSSEE 479
             + WG S  +  ++VG      SGW   +     GDK      S  K +  S WG +S+ 
Sbjct: 1351 -SGWGASKSNS-QDVGWDAL--SGWNKNA---EDGDKFAAAATSSKKQNECSDWG-ASKS 1402

Query: 478  KMEKVGSPAKSSSEWGTEASWGKSS--GDKLENVGSPATKPS--SGWGKSSGDKQENVGR 311
            K + V SP K    W   ++W K++  GD      S + K S  S WG S    Q+   +
Sbjct: 1403 KSQDVVSP-KVDVGWDALSAWHKNAEDGDNFAAAASSSKKQSEWSDWGMSKSKSQDVSPK 1461

Query: 310  SD------INPSSGWGTKASWGKSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKQENVG 149
            +D          SGW  K    K     +  V   A   + W + ASWG  S + +E + 
Sbjct: 1462 TDGTCMKEQTELSGWEMK----KFDTRDVLPVEERASKPNGWDSGASWGIMSKESEE-LD 1516

Query: 148  SPATKPSSGWGKSSGDKQENVGSSATKPSTGWGTRASWGKSS 23
            + A  P SGWG      ++++    T  S+ W T +SWG+ +
Sbjct: 1517 ASAAAPWSGWGTKDSSPKKSLDK--TSKSSSWDTVSSWGRKT 1556


>ref|XP_012449584.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 isoform X2
            [Gossypium raimondii]
          Length = 1921

 Score = 1604 bits (4153), Expect = 0.0
 Identities = 857/1381 (62%), Positives = 1020/1381 (73%), Gaps = 36/1381 (2%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS +ML+KVLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR +
Sbjct: 230  MSSDLSTSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSI 289

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG ++D + SSTKAWLEKMRTLFIRKGSGFSSRSVITGD YKKVNEIG+P EIAQRI
Sbjct: 290  DARYGVNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRI 349

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 350  TFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 409

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSL+AKAEV
Sbjct: 410  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEV 469

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSH+GNLNLQLATD+LLSL+VM K +   KA AQQL+MF+ S LP PA 
Sbjct: 470  YELFSVEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAF 529

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +   P WTA QILQ+  PACLDC  DRYLI KS++LK DF++D++QSVINE+V SIF
Sbjct: 530  LKCNHVAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIF 589

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            +EKGP+EV+ FFDSLQPLLMEN+FA+GF+V LEDFS+S+  ++NI ++IQ I  LLY  R
Sbjct: 590  YEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLR 649

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR  K  +A FILK+S+LG LI               GFLG+QLSD
Sbjct: 650  STYNELVELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSD 709

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFF GLDPYE IVHSIS REVM
Sbjct: 710  KGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVM 769

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRS+RGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF Y ++AR +   FPAGE
Sbjct: 770  VRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSAR-TRPQFPAGE 828

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+VSF NDPIDRRVILYL DC C
Sbjct: 829  PVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDC 888

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L+RV LKD AV+F+IEY++ Q V    E + GLVGHI LNK LL
Sbjct: 889  GRKYCQENAAYLVKNHLRRVKLKDIAVDFIIEYQQQQIV---SEIEAGLVGHILLNKDLL 945

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL +S+ EI  KCQET                  +T L VSE CS QQSC D   +MPC
Sbjct: 946  KELSVSVQEIHMKCQET---INSFRKKKKTAETFKRTDLFVSESCSIQQSCVDKWLDMPC 1002

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T++++ LD    +LA++IYPVLL+T+IKGDPRI SA IIW++PD TTWIRNPS
Sbjct: 1003 LMFFFRNTNDDN-LDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPS 1061

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELAL+VVLEKS VKQ+GDAWRTV+D CLPV ++IDT RS+PYAIKQV++LLGISC
Sbjct: 1062 KTQKGELALEVVLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISC 1121

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MV +G+LKEHL+LLANSMTC GNL+GFNSGGYK LSRSLNI+VPFT
Sbjct: 1122 AFEQAVQRLSTSVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFT 1181

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDG 1010
            EATLFTPRKCFE+AAEKC+ D+LSS+VA+CSWGK VAVGTGSRFD+LW+ +  G +Q  G
Sbjct: 1182 EATLFTPRKCFERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QESGSDQMSG 1240

Query: 1009 IDVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQS 830
            +DVYNFLHMV S  G   S+T CLGEEVD L DE  W LSP+H+   DKPVFED  E ++
Sbjct: 1241 MDVYNFLHMV-SGAGGSNSNTACLGEEVDDLMDE--WCLSPDHSTGLDKPVFEDAAEFEN 1297

Query: 829  WLENKQENTNWE-EVSNNGSFQKSDAWGGWNSE-------AACGKSSEDKWEKLGTPIAN 674
             L+ +  + NWE +VS +          GWN         AA   SSE + E  G   + 
Sbjct: 1298 NLDGQSASANWEKDVSLDKVSDVGWDASGWNKNAEDVDKFAAAATSSEKQNEWSGWGASK 1357

Query: 673  SSSE---------WGTDASWGKSS--GDKLENVGSTTKPSSGWGTESWGKSSGDKQENVG 527
            S+S+         W   ++W K++  GD      S++K  S W    WG S    Q+   
Sbjct: 1358 SNSQVVSPKVDVGWDALSAWHKNAEDGDNFAAAASSSKKQSEW--SDWGMSKSKSQDVSP 1415

Query: 526  RSD---IKPS---SGW--GKSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKLENVGSPA 371
            ++D   +K     SGW   K     +  V   A   + W + ASWG  S +  E + + A
Sbjct: 1416 KTDGTCMKEQTELSGWEMKKFDTRDVLPVEERASKPNGWDSGASWGIMSKES-EELDASA 1474

Query: 370  TKPSSGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEK--VGS-----PAKSS 212
              P SGWG      ++++ ++  + SS W T +SWG+ +    E   +G+       +  
Sbjct: 1475 AAPWSGWGTKDSSPKKSLDKT--SKSSSWDTVSSWGRKTAAVHESGFIGNDNQPGQGRIE 1532

Query: 211  SEWGTEASWGKSSGDKQENVGSPATKPSSGWGKSSGDKQENVGSSATKPSTGWGTRASWG 32
            +EW  +AS  K              + +SGW     ++         + ++ W  +ASW 
Sbjct: 1533 NEWDNKASQVK------------PVQSASGWNNKVTEEM------VVQSTSSWDEKASWE 1574

Query: 31   K 29
            K
Sbjct: 1575 K 1575


>gb|KHG00588.1| DNA-directed RNA polymerase E subunit 1 -like protein [Gossypium
            arboreum]
          Length = 1996

 Score = 1601 bits (4146), Expect = 0.0
 Identities = 865/1389 (62%), Positives = 1017/1389 (73%), Gaps = 44/1389 (3%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS +ML+KVLKQVEII+SSRSG PNFES EVEANDLQ AV QYL+VRGT K+SR +
Sbjct: 230  MSSDLSTSMLRKVLKQVEIIKSSRSGNPNFESHEVEANDLQSAVEQYLQVRGTVKASRSI 289

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG ++D + SSTKAWLEKMRTLFIRKGSGFSSRSVITGD YKKVNEIG+P EIAQRI
Sbjct: 290  DARYGVNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRI 349

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 350  TFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 409

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSL+AKAEV
Sbjct: 410  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEV 469

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSH+GNLNLQLATD+LLSL+VM K +   KA AQQL+MF+ S LP PA 
Sbjct: 470  YELFSVEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAF 529

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +   P WTA QILQ+  PACLDC  DRYLI KS++LK DF++D++QSVINE+V SIF
Sbjct: 530  LKGNHVAPCWTAFQILQTAFPACLDCSCDRYLIGKSDILKVDFNKDLMQSVINEVVASIF 589

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            +EKGP+EV+ FFDSLQPLLMEN+FA+GF+V LEDFS+S+  ++NI ++IQ I  LLY  R
Sbjct: 590  YEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLR 649

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR  K  +A FILK+S+LG LI               GFLG+QLSD
Sbjct: 650  STYNELVELQMENHIRVAKAPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSD 709

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFF GLDPYE IVHSIS REVM
Sbjct: 710  KGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVM 769

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRS+RGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF Y ++AR +   FPAGE
Sbjct: 770  VRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSAR-TRPQFPAGE 828

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+VSF NDPIDRRVILYL DC C
Sbjct: 829  PVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDC 888

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L+RV LKD AV+F+IEY++ Q V E    + GLVGHI LNK LL
Sbjct: 889  GRKYCQENAAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLL 945

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL +S+ EI  KCQET                   T L VSE CS QQSC D   +MPC
Sbjct: 946  KELSVSVQEIHMKCQETINSFRKKKKTAETFKR---TDLFVSESCSIQQSCVDKWLDMPC 1002

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T++++ LD    +LA++IYPVLL+T+IKGDPRI SA IIW++PD TTWIRNPS
Sbjct: 1003 LMFFFRNTNDDN-LDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPS 1061

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELAL+VVLEKS VKQ+GDAWRTV+D CLPV ++IDT RS+PYAIKQV++LLGISC
Sbjct: 1062 KTQKGELALEVVLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISC 1121

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MV +G+LKEHL+LLANSMTC GNL+GFNSGGYKALSRSLNI+VPFT
Sbjct: 1122 AFEQAVQRLSTSVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKALSRSLNIQVPFT 1181

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNE------- 1031
            EATLFTPRKCFE+AAEKC+ D+LSS+VA+CSWGK VAVGTGSRFD+LW+ + E       
Sbjct: 1182 EATLFTPRKCFERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQELEISESTKL 1241

Query: 1030 -------------------GFNQEDGIDVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDE 908
                               G +Q  G+DVYNFLHMV S  G   S+T CLGEEVD L DE
Sbjct: 1242 DQVAALTRISFFSSIPFQSGSDQMSGMDVYNFLHMV-SGAGGSNSNTACLGEEVDDLMDE 1300

Query: 907  IDWSLSPEHNLSSDKPVFEDFVEDQSWLENKQENTNWE-EVSNNGSFQKSDAWGGWNSEA 731
              W LSP+H+   DKPVFED  E ++ L+ +  + NWE +VS +          GWN   
Sbjct: 1301 --WCLSPDHSTGLDKPVFEDAAEFENNLDGQSASANWEKDVSLDKVSDVGWDASGWNKNV 1358

Query: 730  ACGKSSEDKWEKLGTPIANSSSEWGTDASWGKSSGDKLENVGSTTKPSSGWGTES-WGKS 554
                   DK+    T  +   +EW   + WG S   K  +   + K   GW   S W K+
Sbjct: 1359 ----EDVDKFAAAATS-SEKQNEW---SGWGVS---KSNSQVVSPKVDVGWDALSGWNKN 1407

Query: 553  S--GDKQENVGRSDIKPS--SGWGKSSEEKMEKVGSPAKSSSEWGTEASWGKSS--GDKL 392
            +  GDK      S  K +  S WG +S+ K + V SP K    W   ++W K++  GD  
Sbjct: 1408 AEDGDKFAAAATSSKKKNECSDWG-ASKSKSQDVVSP-KVDVGWDALSAWNKNAEDGDNF 1465

Query: 391  ENVGSPATKPS--SGWGKSSGDKQENVGRSD------INPSSGWGTKASWGKSSEEKMEK 236
                S + K S  S WG S    Q+   ++D          SGWG K    K     +  
Sbjct: 1466 AAAASSSKKQSEWSDWGMSKSKSQDVSSKTDGTCMKEQTELSGWGMK----KFDTRDVLP 1521

Query: 235  VGSPAKSSSEWGTEASWGKSSGDKQENVGSPATKPSSGWGKSSGDKQENVGSSATKPSTG 56
            V   A   + W + ASWG  S + +E + + A  P SGWG      ++++    T  S+ 
Sbjct: 1522 VEEGASKPNGWDSGASWGIMSKESEE-LDASAAAPWSGWGTKDSTPKKSLDE--TSKSSS 1578

Query: 55   WGTRASWGK 29
            W T +SWGK
Sbjct: 1579 WDTVSSWGK 1587



 Score = 88.2 bits (217), Expect = 6e-14
 Identities = 118/477 (24%), Positives = 174/477 (36%), Gaps = 106/477 (22%)
 Frame = -1

Query: 1159 FEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDGIDVYNFLHMV 980
            FE AAE    +NL    A+ +W K V++   S  DV WD      N ED   V  F    
Sbjct: 1316 FEDAAE--FENNLDGQSASANWEKDVSLDKVS--DVGWDASGWNKNVED---VDKFAAAA 1368

Query: 979  RSST--------GIVESDTGCLGEEVDMLEDEID-WSLSPEH--------------NLSS 869
             SS         G+ +S++  +  +VD+  D +  W+ + E               N  S
Sbjct: 1369 TSSEKQNEWSGWGVSKSNSQVVSPKVDVGWDALSGWNKNAEDGDKFAAAATSSKKKNECS 1428

Query: 868  D----KPVFEDFVEDQ---------SWLENKQENTNWEEVSNNGSFQKSDAWGGWN---- 740
            D    K   +D V  +         +W +N ++  N+   ++  S +K   W  W     
Sbjct: 1429 DWGASKSKSQDVVSPKVDVGWDALSAWNKNAEDGDNFAAAAS--SSKKQSEWSDWGMSKS 1486

Query: 739  --------SEAACGKSSEDK--W--EKLGT----PIANSSSE---WGTDASWGKSSGDKL 617
                    ++  C K   +   W  +K  T    P+   +S+   W + ASWG  S +  
Sbjct: 1487 KSQDVSSKTDGTCMKEQTELSGWGMKKFDTRDVLPVEEGASKPNGWDSGASWGIMSKESE 1546

Query: 616  ENVGSTTKPSSGWGTE---------------------SWGK----------SSGDKQENV 530
            E   S   P SGWGT+                     SWGK          +  D Q + 
Sbjct: 1547 ELDASAAAPWSGWGTKDSTPKKSLDETSKSSSWDTVSSWGKKIAAVHESGFTGNDNQPDQ 1606

Query: 529  GR---------SDIKP---SSGWG-KSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKLE 389
            GR         S +KP   +SGW  K +EEK+       +S+S W  +ASW K       
Sbjct: 1607 GRIENEWDNKASHVKPVQSASGWNNKVTEEKV------VQSTSSWDEKASWEKP------ 1654

Query: 388  NVGSPATKPSSGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEKVGSPAKSSS 209
                   +  SGW  SS      V  SD +P+ GW   ++W +   + M       KS +
Sbjct: 1655 ------VQSMSGWVSSS------VAGSDESPTKGWSKNSAWDQQKSQTMNNAWDQQKSPA 1702

Query: 208  EWGTEASWGKSSGDKQENVGSPATKP-SSGWGKSSGDKQENVGSSATKP--STGWGT 47
               T +SW +       N       P +S W +       N       P  S GWGT
Sbjct: 1703 ---TNSSWDRQKSSTANNSWDQQKPPANSSWDQEKSPTMNNSWDQQKSPECSQGWGT 1756


>gb|KJB67890.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1841

 Score = 1593 bits (4124), Expect = 0.0
 Identities = 853/1356 (62%), Positives = 1009/1356 (74%), Gaps = 15/1356 (1%)
 Frame = -1

Query: 4045 VAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDVDAHYGT 3866
            V+++  VLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR +DA YG 
Sbjct: 227  VSVMSSVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSIDARYGV 286

Query: 3865 SQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRITFEERV 3689
            ++D + SSTKAWLEKMRTLFIRKGSGFSSRSVITGD YKKVNEIG+P EIAQRITFEERV
Sbjct: 287  NKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRITFEERV 346

Query: 3688 NVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRP 3509
            N+HN++YLQ LVDNKLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRP
Sbjct: 347  NMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDIVFINRP 406

Query: 3508 PTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEVLELFSV 3329
            PTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSL+AKAEV ELFSV
Sbjct: 407  PTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEVYELFSV 466

Query: 3328 EKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPALWKAHCS 3149
            EKQLLSSH+GNLNLQLATD+LLSL+VM K +   KA AQQL+MF+ S LP PA  K +  
Sbjct: 467  EKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAFLKCNHV 526

Query: 3148 GPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIFFEKGPE 2969
             P WTA QILQ+  PACLDC  DRYLI KS++LK DF++D++QSVINE+V SIF+EKGP+
Sbjct: 527  APCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIFYEKGPK 586

Query: 2968 EVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWRSTQNEL 2789
            EV+ FFDSLQPLLMEN+FA+GF+V LEDFS+S+  ++NI ++IQ I  LLY  RST NEL
Sbjct: 587  EVLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLRSTYNEL 646

Query: 2788 VELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSDKGKFYS 2609
            VELQ+E+HIR  K  +A FILK+S+LG LI               GFLG+QLSDKGKFYS
Sbjct: 647  VELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSDKGKFYS 706

Query: 2608 KTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVMVRSSRG 2432
            KTLVEDVA  F+ IYP D  +YP+A++GLIK CFF GLDPYE IVHSIS REVMVRS+RG
Sbjct: 707  KTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVMVRSTRG 766

Query: 2431 LSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGEPVGVLA 2252
            LSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF Y ++AR +   FPAGEPVGVLA
Sbjct: 767  LSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSAR-TRPQFPAGEPVGVLA 825

Query: 2251 ATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGCGREYCQ 2072
            ATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+VSF NDPIDRRVILYL DC CGR+YCQ
Sbjct: 826  ATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDCGRKYCQ 885

Query: 2071 ERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLLEELDIS 1892
            E AAY+VKN L+RV LKD AV+F+IEY++ Q V E    + GLVGHI LNK LL+EL +S
Sbjct: 886  ENAAYLVKNHLRRVKLKDIAVDFIIEYQQQQIVSE---IEAGLVGHILLNKDLLKELSVS 942

Query: 1891 MHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPCLMFVLQ 1712
            + EI  KCQET                   T L VSE CS QQSC D   +MPCLMF  +
Sbjct: 943  VQEIHMKCQETINSFRKKKKTAETFKR---TDLFVSESCSIQQSCVDKWLDMPCLMFFFR 999

Query: 1711 ETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPSKIQKGE 1532
             T++++ LD    +LA++IYPVLL+T+IKGDPRI SA IIW++PD TTWIRNPSK QKGE
Sbjct: 1000 NTNDDN-LDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPSKTQKGE 1058

Query: 1531 LALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISCAFERAV 1352
            LAL+VVLEKS VKQ+GDAWRTV+D CLPV ++IDT RS+PYAIKQV++LLGISCAFE+AV
Sbjct: 1059 LALEVVLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISCAFEQAV 1118

Query: 1351 QRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFTEATLFT 1172
            QRLS SV+MV +G+LKEHL+LLANSMTC GNL+GFNSGGYK LSRSLNI+VPFTEATLFT
Sbjct: 1119 QRLSTSVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFTEATLFT 1178

Query: 1171 PRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDGIDVYNF 992
            PRKCFE+AAEKC+ D+LSS+VA+CSWGK VAVGTGSRFD+LW+ ++ G +Q  G+DVYNF
Sbjct: 1179 PRKCFERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWNQES-GSDQMSGMDVYNF 1237

Query: 991  LHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQSWLENKQ 812
            LHMV S  G   S+T CLGEEVD L DE  W LSP+H+   DKPVFED  E ++ L+ + 
Sbjct: 1238 LHMV-SGAGGSNSNTACLGEEVDDLMDE--WCLSPDHSTGLDKPVFEDAAEFENNLDGQS 1294

Query: 811  ENTNWE-EVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGTDASWGK 635
             + NWE +VS +          GWN  A       DK+    T  +   +EW   + WG 
Sbjct: 1295 ASANWEKDVSLDKVSDVGWDASGWNKNA----EDVDKFAAAATS-SEKQNEW---SGWGA 1346

Query: 634  SSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKPS--SGWGKSSEEKMEKVG 461
            S  +  ++VG      SGW   +     GDK      S  K +  S WG +S+ K + V 
Sbjct: 1347 SKSNS-QDVGWDAL--SGWNKNA---EDGDKFAAAATSSKKQNECSDWG-ASKSKSQDVV 1399

Query: 460  SPAKSSSEWGTEASWGKSS--GDKLENVGSPATKPS--SGWGKSSGDKQENVGRSD---- 305
            SP K    W   ++W K++  GD      S + K S  S WG S    Q+   ++D    
Sbjct: 1400 SP-KVDVGWDALSAWHKNAEDGDNFAAAASSSKKQSEWSDWGMSKSKSQDVSPKTDGTCM 1458

Query: 304  --INPSSGWGTKASWGKSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKQENVGSPATKP 131
                  SGW  K    K     +  V   A   + W + ASWG  S + +E + + A  P
Sbjct: 1459 KEQTELSGWEMK----KFDTRDVLPVEERASKPNGWDSGASWGIMSKESEE-LDASAAAP 1513

Query: 130  SSGWGKSSGDKQENVGSSATKPSTGWGTRASWGKSS 23
             SGWG      ++++    T  S+ W T +SWG+ +
Sbjct: 1514 WSGWGTKDSSPKKSLDK--TSKSSSWDTVSSWGRKT 1547


>emb|CBI40152.3| unnamed protein product [Vitis vinifera]
          Length = 1890

 Score = 1589 bits (4115), Expect = 0.0
 Identities = 850/1411 (60%), Positives = 1027/1411 (72%), Gaps = 61/1411 (4%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLSV+MLKKVLKQ+E+I+ SRSG PNFES ++EAN+LQ ++ QYLEVRGTAK+SR +
Sbjct: 290  MSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSL 349

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            D  +G+S++PN SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNEIG+PFEIAQRI
Sbjct: 350  DTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRI 409

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVNVHN+K+LQ LVD KLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 410  TFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 469

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDC+HLFYPQSL AKAEV
Sbjct: 470  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEV 529

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+GNLNLQLATD+LLSLKV+F++YFL+KA AQQL MFV   LPRPAL
Sbjct: 530  LELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPAL 589

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K+ CSGP WTALQILQ+ LP+  DC G+R+ I KS +LK D++RD++QS++NEIVTSIF
Sbjct: 590  LKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIF 649

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
             EKGP EV++FFDSLQPLLMENLF++GFSVSLEDFS+     QNI + ++ I SLLY+ R
Sbjct: 650  SEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLR 709

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            S  NEL++LQ E+H+R  K+ VA FIL SS LG LI               GFLG QLS+
Sbjct: 710  SMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSE 769

Query: 2626 KGKFYSKTLVEDVASHFERIYPM-DPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYS+TLVE +A  F+  YP    +YP+ ++GLI+ CFFHGLDPYEE+VHSIS RE++
Sbjct: 770  KGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREII 829

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNAR-KSHSLFPAG 2273
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQF+Y V AR K    FPAG
Sbjct: 830  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAG 889

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+V+F ND IDRRVILYLNDC 
Sbjct: 890  EPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCD 949

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR+YC+E AAY+VKNQLK+ SLKD AVEF+IEY K   V  S E   GLVGHIHLNK+L
Sbjct: 950  CGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLL 1009

Query: 1912 LEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMP 1733
            L++L++SM E+  KC+ET                     LS  ECC+FQ SC    S+MP
Sbjct: 1010 LQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKII---LSFRECCTFQHSCQSKGSDMP 1066

Query: 1732 CLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNP 1553
            CL+F  Q   +++ L+++  +LA+ I PVLL+TIIKGD R+ + NIIWISPDTTTWIRNP
Sbjct: 1067 CLLFFWQGNRDDN-LEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNP 1125

Query: 1552 SKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGIS 1373
             K +KGELALD+VLEK+ VKQ GDAWR VLD+CLPV HLIDTRRS+PYAIKQVQELLGIS
Sbjct: 1126 CKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGIS 1185

Query: 1372 CAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPF 1193
            CAF++AVQRLS SVTMVAKG+LKEHLILLANSMTCAGNL+GFNSGGYKALSR+LN++VPF
Sbjct: 1186 CAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPF 1245

Query: 1192 TEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQED 1013
            TEATLFTPRKCFEKA+EKCHTD+LSS+VA+CSWGKHV VGTGSRFDVLWDTK  G  Q+ 
Sbjct: 1246 TEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDG 1305

Query: 1012 GIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDE-IDWSLSPEHNLSSDKPVFEDFV 842
            GID+Y+FLH+VRS +   E DT CLG EV+  +LEDE ++  +SPEH+ + +KPVFED  
Sbjct: 1306 GIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSA 1365

Query: 841  EDQSWLENKQENT--NW---EEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIA 677
            E Q+  EN    +  +W   +      S  K  AW  W ++     + +D +       +
Sbjct: 1366 EFQNTWENHVPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKV---TMKDTFSTREPDES 1422

Query: 676  NSSSEWGTDASWG--KSSGDKLENVGSTTKPSSG-----------WGTESWGKSSGDKQE 536
            + S+ W    +WG  K+           +  SSG           + + +WGK   D+ +
Sbjct: 1423 SRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKI-DEAD 1481

Query: 535  NVG--RSDIKPSSGWGKSSEEKMEKVGSPAKSSSEWG----TEASWGKS--SGDKLENVG 380
              G  ++D KP     + S +   KV     + S +G    T   W K+    + +++  
Sbjct: 1482 KTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDE 1541

Query: 379  SPATK----------------PSSGWGKSSGDKQENVGRSDINPSSGWGTKA--SWGKSS 254
            SP  +                 S GW  S+G  ++   R   +PS      A  SW  S 
Sbjct: 1542 SPVNEHSWDANLPEDPLAQATTSVGWDSSTG--KDWTKRKLQSPSEQQRDPAIKSWSSSH 1599

Query: 253  EEKMEKVGSPAKSSSEWGTEASWGKSSGDKQEN-------VGSPATKPSSGWGKSSGDKQ 95
                E+   PA S+  W +  + G +  ++Q         V +  ++ S GWG S+   Q
Sbjct: 1600 NVMKEQSNQPA-STHGWDSPGAKGWNDVEEQSQWNQRGSAVKNDQSESSHGWGPSNEQNQ 1658

Query: 94   ENVGSSATKPSTGWG----TRASWGKSSEEK 14
                     P+ G G    T++ WG+ S +K
Sbjct: 1659 LPSSQGWGSPNAGAGHESETQSQWGQPSGKK 1689


>ref|XP_002265533.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Vitis vinifera]
            gi|731435545|ref|XP_010645605.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Vitis vinifera]
          Length = 1830

 Score = 1589 bits (4115), Expect = 0.0
 Identities = 850/1411 (60%), Positives = 1027/1411 (72%), Gaps = 61/1411 (4%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLSV+MLKKVLKQ+E+I+ SRSG PNFES ++EAN+LQ ++ QYLEVRGTAK+SR +
Sbjct: 230  MSSDLSVSMLKKVLKQIEVIKGSRSGEPNFESHKIEANNLQSSIEQYLEVRGTAKTSRSL 289

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            D  +G+S++PN SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNEIG+PFEIAQRI
Sbjct: 290  DTRFGSSKEPNESSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEIGLPFEIAQRI 349

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVNVHN+K+LQ LVD KLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 350  TFEERVNVHNMKHLQNLVDEKLCLTYRDGLSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 409

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDC+HLFYPQSL AKAEV
Sbjct: 410  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCVHLFYPQSLGAKAEV 469

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+GNLNLQLATD+LLSLKV+F++YFL+KA AQQL MFV   LPRPAL
Sbjct: 470  LELFSVEKQLLSSHSGNLNLQLATDSLLSLKVLFERYFLNKAAAQQLVMFVSMSLPRPAL 529

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K+ CSGP WTALQILQ+ LP+  DC G+R+ I KS +LK D++RD++QS++NEIVTSIF
Sbjct: 530  LKSPCSGPCWTALQILQTALPSYFDCIGERHWISKSAILKVDYNRDVLQSLVNEIVTSIF 589

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
             EKGP EV++FFDSLQPLLMENLF++GFSVSLEDFS+     QNI + ++ I SLLY+ R
Sbjct: 590  SEKGPNEVLKFFDSLQPLLMENLFSEGFSVSLEDFSIPSEVTQNIQKNVEDISSLLYNLR 649

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            S  NEL++LQ E+H+R  K+ VA FIL SS LG LI               GFLG QLS+
Sbjct: 650  SMYNELLQLQAENHLRLTKVPVANFILNSSALGNLIDSKSDSAINKVVQQIGFLGQQLSE 709

Query: 2626 KGKFYSKTLVEDVASHFERIYPM-DPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYS+TLVE +A  F+  YP    +YP+ ++GLI+ CFFHGLDPYEE+VHSIS RE++
Sbjct: 710  KGKFYSRTLVEGMAYLFKSKYPFHGADYPSGEFGLIRSCFFHGLDPYEEMVHSISTREII 769

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNAR-KSHSLFPAG 2273
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQF+Y V AR K    FPAG
Sbjct: 770  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVKARTKPQHFFPAG 829

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+V+F ND IDRRVILYLNDC 
Sbjct: 830  EPVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCQVNFKNDLIDRRVILYLNDCD 889

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR+YC+E AAY+VKNQLK+ SLKD AVEF+IEY K   V  S E   GLVGHIHLNK+L
Sbjct: 890  CGRKYCRENAAYLVKNQLKKASLKDTAVEFMIEYVKQHAVSGSSEPGTGLVGHIHLNKLL 949

Query: 1912 LEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMP 1733
            L++L++SM E+  KC+ET                     LS  ECC+FQ SC    S+MP
Sbjct: 950  LQDLNVSMQEVCQKCEETINSFRKKKNVGPFFKKII---LSFRECCTFQHSCQSKGSDMP 1006

Query: 1732 CLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNP 1553
            CL+F  Q   +++ L+++  +LA+ I PVLL+TIIKGD R+ + NIIWISPDTTTWIRNP
Sbjct: 1007 CLLFFWQGNRDDN-LEQILHILAHKICPVLLQTIIKGDSRVCTVNIIWISPDTTTWIRNP 1065

Query: 1552 SKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGIS 1373
             K +KGELALD+VLEK+ VKQ GDAWR VLD+CLPV HLIDTRRS+PYAIKQVQELLGIS
Sbjct: 1066 CKSRKGELALDIVLEKAAVKQRGDAWRIVLDACLPVLHLIDTRRSIPYAIKQVQELLGIS 1125

Query: 1372 CAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPF 1193
            CAF++AVQRLS SVTMVAKG+LKEHLILLANSMTCAGNL+GFNSGGYKALSR+LN++VPF
Sbjct: 1126 CAFDQAVQRLSKSVTMVAKGVLKEHLILLANSMTCAGNLIGFNSGGYKALSRALNLQVPF 1185

Query: 1192 TEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQED 1013
            TEATLFTPRKCFEKA+EKCHTD+LSS+VA+CSWGKHV VGTGSRFDVLWDTK  G  Q+ 
Sbjct: 1186 TEATLFTPRKCFEKASEKCHTDSLSSIVASCSWGKHVTVGTGSRFDVLWDTKEIGPAQDG 1245

Query: 1012 GIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDE-IDWSLSPEHNLSSDKPVFEDFV 842
            GID+Y+FLH+VRS +   E DT CLG EV+  +LEDE ++  +SPEH+ + +KPVFED  
Sbjct: 1246 GIDIYSFLHLVRSGSYGKEPDTACLGAEVEDLILEDENLELGMSPEHSSNFEKPVFEDSA 1305

Query: 841  EDQSWLENKQENT--NW---EEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIA 677
            E Q+  EN    +  +W   +      S  K  AW  W ++     + +D +       +
Sbjct: 1306 EFQNTWENHVPGSGGDWAVNQNKETTASTLKPSAWSSWGTDKV---TMKDTFSTREPDES 1362

Query: 676  NSSSEWGTDASWG--KSSGDKLENVGSTTKPSSG-----------WGTESWGKSSGDKQE 536
            + S+ W    +WG  K+           +  SSG           + + +WGK   D+ +
Sbjct: 1363 SRSAGWDDKGTWGTDKAQNTAFRRTHEDSPRSSGRDETFRDGRPQFASSAWGKKI-DEAD 1421

Query: 535  NVG--RSDIKPSSGWGKSSEEKMEKVGSPAKSSSEWG----TEASWGKS--SGDKLENVG 380
              G  ++D KP     + S +   KV     + S +G    T   W K+    + +++  
Sbjct: 1422 KTGWNKNDGKPQMDKLRESYDWDCKVAQEKTTQSTYGGISSTTGDWKKNELQMEVVQHDE 1481

Query: 379  SPATK----------------PSSGWGKSSGDKQENVGRSDINPSSGWGTKA--SWGKSS 254
            SP  +                 S GW  S+G  ++   R   +PS      A  SW  S 
Sbjct: 1482 SPVNEHSWDANLPEDPLAQATTSVGWDSSTG--KDWTKRKLQSPSEQQRDPAIKSWSSSH 1539

Query: 253  EEKMEKVGSPAKSSSEWGTEASWGKSSGDKQEN-------VGSPATKPSSGWGKSSGDKQ 95
                E+   PA S+  W +  + G +  ++Q         V +  ++ S GWG S+   Q
Sbjct: 1540 NVMKEQSNQPA-STHGWDSPGAKGWNDVEEQSQWNQRGSAVKNDQSESSHGWGPSNEQNQ 1598

Query: 94   ENVGSSATKPSTGWG----TRASWGKSSEEK 14
                     P+ G G    T++ WG+ S +K
Sbjct: 1599 LPSSQGWGSPNAGAGHESETQSQWGQPSGKK 1629


>ref|XP_008231662.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Prunus mume]
          Length = 1855

 Score = 1587 bits (4110), Expect = 0.0
 Identities = 866/1418 (61%), Positives = 1016/1418 (71%), Gaps = 70/1418 (4%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MS+D S++MLKKVLKQVEIIRSSRSG PNFESQ VEAN+LQ  + QYL+VRGT K SRD+
Sbjct: 233  MSADPSISMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDI 292

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA +G +++ N SSTKAWLEKMRTLFIRKGSGFSSRSVITGDA+++VNE+G+P+EIAQRI
Sbjct: 293  DARFGVNKELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRI 352

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEE+VN HNI+YLQELVD+KLCLTY+DGSS+YSLREGSKGHTFLRPGQVVHRRIMDGD+
Sbjct: 353  TFEEKVNDHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDL 412

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VF+NRPPTTHKHSLQAL VYVHDDH VKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 413  VFVNRPPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 472

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+G  NLQLATDALLSLK+MFKKYFLDKA AQQLAMF  S LPRPAL
Sbjct: 473  LELFSVEKQLLSSHSGKPNLQLATDALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPAL 532

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             KA+ +  +WTA QILQ+ LPA  DC GD YL+ KSE+L  DF    + +V+N+I TS+F
Sbjct: 533  LKANSAHSYWTAFQILQTALPAHFDCNGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVF 592

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKG E V++FFDSLQPLLMENLF++GFSV LEDFS+S+A++Q+I + IQ    LLYH R
Sbjct: 593  FEKGGEAVLKFFDSLQPLLMENLFSEGFSVGLEDFSMSRASIQDIQKNIQDSSDLLYHLR 652

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NE VE Q+++ IR VK+ V+ FIL+SS LG LI               GFLGLQLSD
Sbjct: 653  STYNEFVEFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSD 712

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVMV 2447
            KG+FYSKTLVEDVAS     YP D +YP+A+YGL++ CFFHGLDPYE IVHSI+ REV+V
Sbjct: 713  KGRFYSKTLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIV 772

Query: 2446 RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHS-LFPAGE 2270
            RSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQF+Y VN    H  LFPAGE
Sbjct: 773  RSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNTGSRHQHLFPAGE 832

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLC+V+F N+ IDRRVILYLN+CGC
Sbjct: 833  PVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCGC 892

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YC+ERAA +VKNQLK+VSLKD AVEF+IEY    + L SL  D GLVGHIHLN+ +L
Sbjct: 893  GRKYCRERAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLVNDAGLVGHIHLNEDML 952

Query: 1909 EELDISMHEILPKCQET---XXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSN 1739
             EL++ +H+IL KCQET                      T L  SE CSF  S A+  S+
Sbjct: 953  RELNVGVHDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSSAEKRSD 1012

Query: 1738 MPCLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIR 1559
             PCLMF LQ T +      L    A++I PVLLETIIKGDPRI SANIIWI PDTTTWIR
Sbjct: 1013 SPCLMFFLQATDDLETTTTLQ-YYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWIR 1071

Query: 1558 NPSKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLG 1379
            +P+K QKGE ALDVVLEKSV+KQSGDAWRTVLDSCLPV HLIDTRRS+PYAIKQ+QELLG
Sbjct: 1072 SPNKSQKGEWALDVVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELLG 1131

Query: 1378 ISCAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEV 1199
            +SCAF++AVQRLS +VTMVAKG+LKEHLILLANSMTCAGN VGFNS GYKALSR+LNI+V
Sbjct: 1132 VSCAFDQAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQV 1191

Query: 1198 PFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQ 1019
            PFTEATLFTPRKCFE+AAEKCH D+L+S+VA+CSWGKHVAVGTG+RFDVLWDT+   F Q
Sbjct: 1192 PFTEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGARFDVLWDTREVEFTQ 1251

Query: 1018 EDGIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEI-DWSLSPEHNLSSDKPVFED 848
            E G+DV+NFLHMV S+  + E  TG LG EVD  ML DE+ D S SPE N S D+PVFED
Sbjct: 1252 EGGLDVFNFLHMV-STANVEEETTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFED 1310

Query: 847  FVEDQSWLENKQENTNWEEVS----------------NNGSFQKSDAWGGWNSEAACGKS 716
             VE    L +  E +NWE+ S                N G+    D W  W +E    + 
Sbjct: 1311 LVEFDDKLGDLPEKSNWEKDSSFHTDSSGGKDWSVDKNVGTVAVPDVWSSWGTEKGKTQD 1370

Query: 715  SEDKWEKLGTPIANSSSEWGTDASWGKSSG--DKLENVGSTTKPSSGWGTESWGKSSGDK 542
            S     +L    +  SS   T ++WGK+    +     G+TT   + W     G S  D 
Sbjct: 1371 SNSAEAQLD---SKKSSVLDTSSAWGKNPAKENTTSTWGTTTASENDWCGR--GVSEDDS 1425

Query: 541  QENVGRSD--IKPSSGWGKSS--EEKMEKVG-SPAK--SSSEWGT----EASW-----GK 410
                G+    +  SS W  ++  E+     G +PAK  ++S WGT    E  W     G+
Sbjct: 1426 ASLSGKKSGVLNTSSAWATNTAREDAASAWGTNPAKENTTSTWGTTMASENDWCGRGVGQ 1485

Query: 409  SSGDKLENVGSPATKPSSGWGKSSG--DKQENVGR--SDINPSSGWG-TKAS---W---- 266
                 L    S  +  SS W  ++   D     G+  +  N +S WG TKAS   W    
Sbjct: 1486 DDSASLSGKKSSVSDTSSAWAANTAREDAASAWGKHPAKENTTSTWGTTKASENDWCGGG 1545

Query: 265  --GKSSEEKMEKVGSPAKSSSEWGTE-------ASWGKS-SGDKQENVGSPATKPSSGWG 116
                 S     K  S   +SS W          ++WGK+ + +   +     T   + W 
Sbjct: 1546 VGHDDSASLSGKKSSVLNTSSVWAANTAREDATSAWGKNPAKENTTSTWGTTTASENDWC 1605

Query: 115  KSSGDKQENVGSSATKPS------TGWGTRASWGKSSE 20
                 K E V    TKP       +GW +    G S E
Sbjct: 1606 GREAGKVEPVDLQPTKPQDDSASLSGWDSPTGDGNSGE 1643


>ref|XP_009361958.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus x
            bretschneideri] gi|694366759|ref|XP_009361959.1|
            PREDICTED: DNA-directed RNA polymerase V subunit 1 [Pyrus
            x bretschneideri]
          Length = 1960

 Score = 1585 bits (4105), Expect = 0.0
 Identities = 849/1405 (60%), Positives = 1017/1405 (72%), Gaps = 55/1405 (3%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MS+D S++ML+KVLKQ+E+IRSSRSG PNFESQ VEAN+LQ  V QYL+VRGT K+SRD+
Sbjct: 233  MSADPSISMLRKVLKQIEVIRSSRSGIPNFESQIVEANELQAIVDQYLQVRGTGKASRDI 292

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA  G +++ N SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYK+VNE+G+P+EIAQRI
Sbjct: 293  DARLGVNRELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKRVNEVGIPYEIAQRI 352

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEE+VN HNI+YLQ+LVD KLCLTYRDGSS+YSLREGSKGHTFLRPGQVVHRRI+DGD+
Sbjct: 353  TFEEKVNDHNIRYLQQLVDKKLCLTYRDGSSTYSLREGSKGHTFLRPGQVVHRRILDGDL 412

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VF+NRPPTTHKHSLQAL VYVHDDH VKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 413  VFVNRPPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 472

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+G  NLQ+ATD+LLSLK+MFK YFLDK+ AQQLAMF  S LPRPAL
Sbjct: 473  LELFSVEKQLLSSHSGKPNLQMATDSLLSLKMMFKNYFLDKSAAQQLAMFASSSLPRPAL 532

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             KA+ +  +WTALQILQ+ LPA  D CG++YL+ KSE+LK DF    + +V+N++ TS+F
Sbjct: 533  LKANAARSYWTALQILQTALPAHFDYCGEKYLVNKSEILKIDFSTSEVSAVMNDVATSVF 592

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKG E+V++FFDSLQPLLMEN+F++GFSV LEDF +SK ++Q+I + IQ    LLYH R
Sbjct: 593  FEKGGEDVLKFFDSLQPLLMENIFSEGFSVGLEDFYMSKTSIQDIQKNIQDTSDLLYHLR 652

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NE VE Q+ES I+++K+ V+ FIL+SS  G LI               GFLGLQLSD
Sbjct: 653  STYNEFVEFQLESRIKNLKVPVSCFILESSAFGDLIDSKSDSAINKVVQQIGFLGLQLSD 712

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVMV 2447
            KG+FYSKTLVEDVAS +   Y  +  YP+A+YGL++ CFFHGLDPYEEIVHSI+ REV+V
Sbjct: 713  KGRFYSKTLVEDVASLYHNKYSFNMEYPSAEYGLVQSCFFHGLDPYEEIVHSIATREVIV 772

Query: 2446 RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA-RKSHSLFPAGE 2270
            RSSRGL+EPGTLFKNLMA+LRDVVICYDGTVRNVCSNS+IQF+Y VN+  +  +LFPAGE
Sbjct: 773  RSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSVIQFEYGVNSGSRPPNLFPAGE 832

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLC+V+F N+ IDRRVILYL++CGC
Sbjct: 833  PVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLSNCGC 892

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR +C+ERAA +VKNQLK+VSLKD AVEF+IEY    + L S+  + GLVGHIHLN+ LL
Sbjct: 893  GRTFCRERAACLVKNQLKKVSLKDTAVEFMIEYSNQLSSLGSMVNEAGLVGHIHLNEELL 952

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXK---TSLSVSECCSFQQSCADDCSN 1739
             EL++ + EI  KCQET                      T L  SE CSF  SCAD  S+
Sbjct: 953  RELNVGVDEIQQKCQETVNSFRRKRVGKKKFNIGYLFKNTVLFASEHCSFHHSCADKRSD 1012

Query: 1738 MPCLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIR 1559
             PCLMF LQ T E   L+  S   A++I PVLLETIIKGDPRI SANIIWI PDTTTWIR
Sbjct: 1013 SPCLMFFLQATEE---LETTSQYYADLICPVLLETIIKGDPRISSANIIWIDPDTTTWIR 1069

Query: 1558 NPSKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLG 1379
            +P+K QKGE ALDVVLEKSVVKQSGDAWR VLDSCLPV HLIDTRRS+PYAIKQ+QELLG
Sbjct: 1070 SPNKSQKGEWALDVVLEKSVVKQSGDAWRIVLDSCLPVLHLIDTRRSIPYAIKQIQELLG 1129

Query: 1378 ISCAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEV 1199
            +SCAF++AVQRL+ +VTMVAKG+LKEHLILLANSMTCAGN VGFNS GYKALSR+LNI+V
Sbjct: 1130 VSCAFDQAVQRLATAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQV 1189

Query: 1198 PFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQ 1019
            PFTEATLFTPRKCFE+AAEKCH D+LSS+VA+CSWGKHVAVGTGSRFD+LWDT+  G NQ
Sbjct: 1190 PFTEATLFTPRKCFERAAEKCHMDSLSSIVASCSWGKHVAVGTGSRFDILWDTREGGLNQ 1249

Query: 1018 EDGIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEI-DWSLSPEHNLSSDKPVFED 848
            E G+DV+NFLHMV ++ G  E+ TG LG EVD  M+ DE+ D  LSPE +   D+PVFED
Sbjct: 1250 EGGLDVFNFLHMVSTANG-EEATTGALGAEVDDLMVVDELADSCLSPELDSGLDRPVFED 1308

Query: 847  FVEDQSWLENKQENTNWEEVSN--NGSFQKSDAWGGWNSEAA---------CGKSSEDKW 701
             +E +   E     ++WE  S+    +  + DA   W    A           K++ED  
Sbjct: 1309 IIEFEDKSETPPGKSSWENDSSVWGTNSTREDATSSWGKTPAREATTTTWGIDKAAEDTT 1368

Query: 700  EKLGTPIANSSSEWGTDASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQE----N 533
               GT   N++ E  T A WGK+  + + + G   K S    T SWGK+   +       
Sbjct: 1369 PAWGT---NTAREDATSA-WGKTR-EHITSAGGADKTSEN-DTSSWGKTLAKEPAASSWG 1422

Query: 532  VGRSDIKPSSGWG-KSSEEKMEKVGSPAKSSSEWGTEA-------SWGKSSGDKLEN--- 386
            + ++       WG  ++ E   K G P  S+  WG          SWGK+   +      
Sbjct: 1423 IAKAAEDTPPAWGTNTAREDAAKTGEPPTSA--WGASKVSQNDTPSWGKTPAKETSTSTW 1480

Query: 385  -VGSPATKPSSGWGKSSGDKQENVGRSDINPSSGWGTKASWGKSSEEKMEKVGSPAKSSS 209
             +   A   +  WG S+        R D  P+        WGKS E          K++S
Sbjct: 1481 GIDKAAEDTTPVWGTSTA-------REDATPA--------WGKSRE----------KTAS 1515

Query: 208  EWGTE-------ASWGKSSGDKQEN----VGSPATKPSSGWGKSSG--DKQENVGSSATK 68
             WGT+       +SWGK+   K       +   A   +  WG S+   D     G S   
Sbjct: 1516 AWGTDKESDNDTSSWGKNPARKPTTSTWGIDKAAEDTTPAWGTSTAREDATPAWGKSREN 1575

Query: 67   PSTGWGT-------RASWGKSSEEK 14
             ++ WGT       R+SWGK+   K
Sbjct: 1576 TASAWGTDKESENDRSSWGKTPARK 1600


>ref|XP_007218881.1| hypothetical protein PRUPE_ppa000088mg [Prunus persica]
            gi|462415343|gb|EMJ20080.1| hypothetical protein
            PRUPE_ppa000088mg [Prunus persica]
          Length = 1855

 Score = 1584 bits (4101), Expect = 0.0
 Identities = 862/1422 (60%), Positives = 1017/1422 (71%), Gaps = 74/1422 (5%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MS+D S++MLKKVLKQVEIIRSSRSG PNFESQ VEAN+LQ  + QYL+VRGT K SRD+
Sbjct: 233  MSADPSISMLKKVLKQVEIIRSSRSGIPNFESQIVEANELQAIIDQYLQVRGTGKPSRDI 292

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA +G +++ N SSTKAWLEKMRTLFIRKGSGFSSRSVITGDA+++VNE+G+P+EIAQRI
Sbjct: 293  DARFGVNKELNASSTKAWLEKMRTLFIRKGSGFSSRSVITGDAFRRVNEVGIPYEIAQRI 352

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEE+VN HNI+YLQELVD+KLCLTY+DGSS+YSLREGSKGHTFLRPGQVVHRRIMDGD+
Sbjct: 353  TFEEKVNDHNIRYLQELVDSKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDL 412

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VF+NRPPTTHKHSLQAL VYVHDDH VKINPLIC PLSADFDGDCIHLFYPQSLAAKAEV
Sbjct: 413  VFVNRPPTTHKHSLQALQVYVHDDHVVKINPLICGPLSADFDGDCIHLFYPQSLAAKAEV 472

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+G  NLQLA DALLSLK+MFKKYFLDKA AQQLAMF  S LPRPAL
Sbjct: 473  LELFSVEKQLLSSHSGKPNLQLAADALLSLKMMFKKYFLDKAAAQQLAMFASSSLPRPAL 532

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             KA+ +  +WTA QILQ+ LPA  DC GD YL+ KSE+L  DF    + +V+N+I TS+F
Sbjct: 533  LKANSAHSYWTAFQILQTALPAHFDCSGDNYLVNKSEILNIDFSTSSVAAVMNDIATSVF 592

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKG E+V++FFDSLQPLLMENLF++GFSV LEDF +S+ ++Q+I + IQ    LLYH R
Sbjct: 593  FEKGGEDVLKFFDSLQPLLMENLFSEGFSVGLEDFYMSRTSIQDIQKNIQDSSDLLYHLR 652

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NE VE Q+++ IR VK+ V+ FIL+SS LG LI               GFLGLQLSD
Sbjct: 653  STYNEFVEFQLQNRIRSVKVPVSHFILESSALGDLIDSKSDSAINKIVQQIGFLGLQLSD 712

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDPNYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVMV 2447
            KG+FYSKTLVEDVAS     YP D +YP+A+YGL++ CFFHGLDPYE IVHSI+ REV+V
Sbjct: 713  KGRFYSKTLVEDVASLCHSKYPSDIDYPSAEYGLVQSCFFHGLDPYEAIVHSIATREVIV 772

Query: 2446 RSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVN--ARKSHSLFPAG 2273
            RSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQF+Y VN  +R  H LFPAG
Sbjct: 773  RSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQFEYGVNIGSRPQH-LFPAG 831

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDS+PSSN+SWELMKEILLC+V+F N+ IDRRVILYLN+CG
Sbjct: 832  EPVGVLAATAMSNPAYKAVLDSTPSSNSSWELMKEILLCKVNFKNELIDRRVILYLNNCG 891

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR+YC+ERAA +VKNQLK+VSLKD AVEF+IEY    + L SL  D GLVGHIHLN+ +
Sbjct: 892  CGRKYCRERAACLVKNQLKKVSLKDTAVEFMIEYNNQLSGLGSLINDAGLVGHIHLNEDM 951

Query: 1912 LEELDISMHEILPKCQET---XXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCS 1742
            L EL+I +H+IL KCQET                      T L  SE CSF  SCA+  S
Sbjct: 952  LRELNIGVHDILQKCQETINSFRRKKVGKKKFNIGYHFKNTVLFASEHCSFHHSCAEKRS 1011

Query: 1741 NMPCLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWI 1562
            + PCLMF LQ T +      L    A++I PVLLETIIKGDPRI SANIIWI PDTTTWI
Sbjct: 1012 DSPCLMFFLQATDDLETTTTLQ-YYADLICPVLLETIIKGDPRIGSANIIWIDPDTTTWI 1070

Query: 1561 RNPSKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELL 1382
            R+P+K QKGE ALD+VLEKSV+KQSGDAWRTVLDSCLPV HLIDTRRS+PYAIKQ+QELL
Sbjct: 1071 RSPNKSQKGEWALDIVLEKSVIKQSGDAWRTVLDSCLPVLHLIDTRRSIPYAIKQIQELL 1130

Query: 1381 GISCAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIE 1202
            G+SCAF++AVQRLS +VTMVAKG+LKEHLILLANSMTCAGN VGFNS GYKALSR+LNI+
Sbjct: 1131 GVSCAFDQAVQRLSTAVTMVAKGVLKEHLILLANSMTCAGNFVGFNSSGYKALSRALNIQ 1190

Query: 1201 VPFTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFN 1022
            VPFTEATLFTPRKCFE+AAEKCH D+L+S+VA+CSWGKHVAVGTG RFDVLWDT+     
Sbjct: 1191 VPFTEATLFTPRKCFERAAEKCHMDSLASIVASCSWGKHVAVGTGVRFDVLWDTREVELT 1250

Query: 1021 QEDGIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEI-DWSLSPEHNLSSDKPVFE 851
            QE G+DV+NFLHMV S+  + E+ TG LG EVD  ML DE+ D S SPE N S D+PVFE
Sbjct: 1251 QEGGLDVFNFLHMV-STANVEEATTGALGAEVDDLMLVDEMADSSFSPELNSSFDRPVFE 1309

Query: 850  DFVEDQSWLENKQENTNWEEVS----------------NNGSFQKSDAWGGWNSEAACGK 719
            D VE    L +  E +NWE+ S                N G+    D W  W +E    +
Sbjct: 1310 DLVEFDDKLGDLPEKSNWEKDSSFHTDSNGGKDWSVDKNVGTVAVPDVWSSWGTEKGKTQ 1369

Query: 718  SSEDKWEKLGTPIANSSSEWGTDASWGKSSG--DKLENVGSTTKPSSGWGTESWGKSSGD 545
             S     +L    +  SS   T ++WGK+    +     G+TT   + W     G+    
Sbjct: 1370 DSNSAEAQLD---SKKSSVLDTSSAWGKNPAKENTTSTWGTTTASENDWCGRGVGEDDSA 1426

Query: 544  KQENVGRSDIKPSSGWGKSS--EEKMEKVG-SPAK--SSSEWGT----EASW-GKSSGDK 395
                     +  SS W  ++  E+     G +PAK  S+S WGT    E  W G+  G  
Sbjct: 1427 TLSGKKSGVLNTSSAWATNTAREDAASAWGTNPAKENSTSTWGTTRANENDWCGREVGQ- 1485

Query: 394  LENVGSPATKPSSGWGKSSGDKQENVGRSDINPSSGWG-------TKASWGKSSEEKME- 239
             ++  S + K SS    SS     N  R D   +S WG       T ++WG ++  + + 
Sbjct: 1486 -DDSASLSVKKSSVLDTSSA-WATNTARED--AASAWGKHPAKENTTSTWGTTTASENDW 1541

Query: 238  ---------------KVGSPAKSSSEWGTE-------ASWGKS-SGDKQENVGSPATKPS 128
                           K  S   +SS W T        ++WGK+ + +   +     T   
Sbjct: 1542 CGRGVGHDDSASLSGKKSSVLNTSSVWATNTAREDATSAWGKNPAKENTTSTWGTTTASE 1601

Query: 127  SGWGKSSGDKQENVGSSATKPS------TGWGTRASWGKSSE 20
            + W      K E V    TKP       +GW +    G S E
Sbjct: 1602 NDWCGREAGKVEPVDLQPTKPQDDSASLSGWDSPTGDGNSGE 1643


>ref|XP_002303926.2| hypothetical protein POPTR_0003s19630g [Populus trichocarpa]
            gi|550343552|gb|EEE78905.2| hypothetical protein
            POPTR_0003s19630g [Populus trichocarpa]
          Length = 1920

 Score = 1572 bits (4071), Expect = 0.0
 Identities = 853/1426 (59%), Positives = 1010/1426 (70%), Gaps = 77/1426 (5%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS++MLKKVLKQ E+IRSSRSG PNF++ + EA  LQ  V QYL+VRGT K+SRDV
Sbjct: 236  MSSDLSISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDV 295

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            D  YG  ++ + S+TKAWLEKMRTLFIRKGSGFSSRSVITGDAY  VN++G+P+EIAQRI
Sbjct: 296  DTRYGVKKESSESTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRI 355

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERV+VHN++YLQELVDNKLCLTY+DGSS+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 356  TFEERVSVHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 415

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDH VKINPLIC PLSADFDGDC+HLFYPQSLAAKAEV
Sbjct: 416  VFINRPPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEV 475

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+GNLNLQL TD+LLSLK+MFK  FL K+ AQQLAMF+   LP+PAL
Sbjct: 476  LELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPAL 535

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +C  PHWTA QILQ  LPAC +C G+R+LI+ S  LK DF+RD++ SVINEI+ S+F
Sbjct: 536  LKVNCFFPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISMF 595

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKG   V++FF+SLQP+LMENLF++GFSVSLEDFS+S+A  Q I +  +AI  LL + R
Sbjct: 596  FEKGSGAVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPLLCNLR 655

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR VK  V +FIL SS LGYLI               GFLGLQ+SD
Sbjct: 656  STFNELVELQVENHIRDVKQPVREFILTSSALGYLIDSKSDAAVTKVVQQIGFLGLQVSD 715

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            +GK YSKTLVED+ASHF   YP +  +YP+A+YGLI+  FFHGLD YEE+ HSIS REV+
Sbjct: 716  RGKLYSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVI 775

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVN-ARKSHSLFPAG 2273
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF+Y V    +S SLFPAG
Sbjct: 776  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFEYGVKVGTESQSLFPAG 835

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDS+PSSN SW++MKEILLC+V F ND  DRRVILYLNDCG
Sbjct: 836  EPVGVLAATAMSNPAYKAVLDSTPSSNCSWDMMKEILLCKVGFKNDLADRRVILYLNDCG 895

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR YCQERAAY+VKN L++VSLKD A  F+IEYK  Q + ES  +D GLVGH+HL+K  
Sbjct: 896  CGRNYCQERAAYLVKNHLEKVSLKDIAKCFMIEYKS-QQIPESFGSDAGLVGHVHLDKRK 954

Query: 1912 LEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMP 1733
            L++L+I+   IL KCQET                  KT L VSE CSFQQ C D+    P
Sbjct: 955  LQDLNITAQVILEKCQET---VNTFRKKKKVGNLFKKTILLVSESCSFQQ-CIDE---SP 1007

Query: 1732 CLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNP 1553
            CLMF  Q  +++ +L++ S +LA+MI PVLLETIIKGD RI  ANIIW +P+T TWIRNP
Sbjct: 1008 CLMFFWQ-GADDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETNTWIRNP 1066

Query: 1552 SKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGIS 1373
            S+ QKGELALD+VLEKSVVK+SGDAWR VLDSCLPV HLI+T RS+PYAIKQVQELLG+S
Sbjct: 1067 SRTQKGELALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVS 1126

Query: 1372 CAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPF 1193
            CAF+ AVQRLS SVTMVAKG+LKEHLILL NSMTCAG+L+GF +GGYK LSRSL+I+VPF
Sbjct: 1127 CAFDTAVQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPF 1186

Query: 1192 TEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQED 1013
            TEATLFTPRKCFEKAAEKCHTD+LSS+VA+C+WGKHV VGTGS FDVLWDTK    N E 
Sbjct: 1187 TEATLFTPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEG 1246

Query: 1012 GIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEIDWSLSPEHNLSSDKPVFEDFVE 839
             +DVY+FL+MVRS+ G  ES T CLG EVD  MLEDE DW+LSPEHN SSDKP FED  E
Sbjct: 1247 SMDVYSFLNMVRSTAGGEESVTACLGAEVDDLMLEDE-DWNLSPEHNSSSDKPTFEDSAE 1305

Query: 838  DQSWLENKQENTNWEEVSN---------NGSFQKSD--------------------AWGG 746
             Q +L N+   +NWE++S+         N    K+D                    A  G
Sbjct: 1306 FQDFLGNQPAESNWEKISSLKDRSRSSGNWDVDKNDGAVKEKPWSLGMNTAEANDVASSG 1365

Query: 745  WNSEAACGKSSEDKWEK-----------------------LGTPI---ANSSSEWGTDAS 644
            W++ AA  +++ + W                           T +     +S++W   A+
Sbjct: 1366 WDTAAA--RTTNNSWNSENNVAQSNSFSGWATKKPEPHNGFATKVQEEPTTSNDWDAGAA 1423

Query: 643  WGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKP--SSGWGKSSEEKME 470
            WG+   D+      T    S WG  + G  SG  +    R + +   + GW     +   
Sbjct: 1424 WGRK--DRDNKFAETNASKSWWGKVTDGDESGQNKSKNKRPEDQDVGTHGWDDKMSQDQS 1481

Query: 469  KVGSPAKSSSEWGTEASWGKSSGDKLENVGSPATKPSSGWG--KSSGDK--QENVGRSDI 302
              G  +K++ E  TE+    S G+      +   K +S WG   + GDK   + V  +  
Sbjct: 1482 ISGWASKTTQEATTESLGWDSKGNSNPGDAACGWKAASTWGAENTDGDKLWGKEVSSNQA 1541

Query: 301  NPSSGWGTKAS------WGKSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKQENVGSPA 140
            + +SGWG   S      WG + E          KS   WG  +S G      +    +  
Sbjct: 1542 DTASGWGKPKSPEISLGWGSTKES--------VKSDRGWGVSSSGGGRDKKTENQSLAGQ 1593

Query: 139  TKPSSGWGKSSGDKQENVGSSATKP-----STGWGTRASWGKSSEE 17
             K S GWG      Q +  S   KP     S GWG     GK   E
Sbjct: 1594 GKESGGWGNKVTSNQADTASGWGKPKSSENSQGWGLSKESGKEVHE 1639



 Score = 79.3 bits (194), Expect = 3e-11
 Identities = 77/286 (26%), Positives = 116/286 (40%), Gaps = 33/286 (11%)
 Frame = -1

Query: 823  ENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGTDAS 644
            E   E+  W+   + G+    DA  GW + +  G  + D  +  G  +  SS++  T + 
Sbjct: 1492 EATTESLGWD---SKGNSNPGDAACGWKAASTWGAENTDGDKLWGKEV--SSNQADTASG 1546

Query: 643  WGKSSGDKLENVGSTTKPS----SGWGTESWGKSSGDKQENVGRSDI-KPSSGWGKSSEE 479
            WGK    ++     +TK S     GWG  S G     K EN   +   K S GWG     
Sbjct: 1547 WGKPKSPEISLGWGSTKESVKSDRGWGVSSSGGGRDKKTENQSLAGQGKESGGWGN---- 1602

Query: 478  KMEKVGSPAKSSSEWGTEAS------WG--KSSGDKLENVGSPATKPSSGWGKSSGDKQE 323
              +   + A ++S WG   S      WG  K SG ++   G P +  + G G  + +  E
Sbjct: 1603 --KVTSNQADTASGWGKPKSSENSQGWGLSKESGKEVHEWGVPNS--AGGNGSETNNNNE 1658

Query: 322  NVGRSDINPSSGWGTKAS---------WGKSSEEKM-EKVGSP---AKSSSEWGTEASWG 182
            N    +    SGW  KAS         WGK     + E  GSP    K+   WG   S G
Sbjct: 1659 NQSLVEQGKESGWDNKASSNQEGTASGWGKPKSPALSEGWGSPREPVKAVHGWGVPNSGG 1718

Query: 181  KSSGDKQENVGSPATK-------PSSGWGKSSGDKQENVGSSATKP 65
             +   + +  G  + +        S GWG ++GD  +N  +  +KP
Sbjct: 1719 GNGSGRDQQWGQQSREFKKDRFEGSRGWGSNNGD-WKNKRNRPSKP 1763


>ref|XP_011020393.1| PREDICTED: DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica] gi|743817375|ref|XP_011020394.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica] gi|743817379|ref|XP_011020395.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica] gi|743817383|ref|XP_011020396.1| PREDICTED:
            DNA-directed RNA polymerase V subunit 1-like [Populus
            euphratica]
          Length = 1916

 Score = 1567 bits (4057), Expect = 0.0
 Identities = 844/1368 (61%), Positives = 1008/1368 (73%), Gaps = 20/1368 (1%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS++MLKKVLKQ E+IRSSRSG PNF++ + EA  LQ  V QYL+VRGT K+SRDV
Sbjct: 232  MSSDLSISMLKKVLKQAEVIRSSRSGAPNFDAHKDEATSLQSMVDQYLQVRGTTKTSRDV 291

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            D  YG  ++ + S+TKAWLEKMRTLFIRKGSGFSSRSVITGDAY  VN++G+P+EIAQRI
Sbjct: 292  DTRYGVKKESSKSTTKAWLEKMRTLFIRKGSGFSSRSVITGDAYTLVNQVGIPYEIAQRI 351

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERV++HN++YLQELVDNKLCLTY+DGSS+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 352  TFEERVSMHNMRYLQELVDNKLCLTYKDGSSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 411

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDH VKINPLIC PLSADFDGDC+HLFYPQSLAAKAEV
Sbjct: 412  VFINRPPTTHKHSLQALSVYVHDDHAVKINPLICGPLSADFDGDCVHLFYPQSLAAKAEV 471

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            LELFSVEKQLLSSH+GNLNLQL TD+LLSLK+MFK  FL K+ AQQLAMF+   LP+PAL
Sbjct: 472  LELFSVEKQLLSSHSGNLNLQLTTDSLLSLKMMFKACFLGKSAAQQLAMFISPYLPQPAL 531

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +C  PHWTA QILQ  LPAC +C G+R+LI+ S  LK DF+RD++ SVINEI+ S+F
Sbjct: 532  LKVNCFFPHWTAHQILQMALPACFNCSGERFLIINSNFLKVDFNRDVVASVINEILISMF 591

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            FEKG   V++FF+SLQP+LMENLF++GFSVSLEDFS+S+A  Q I +  +AI  LL + R
Sbjct: 592  FEKGSGAVLKFFNSLQPMLMENLFSEGFSVSLEDFSISRAVKQRIPESFKAISPLLCNLR 651

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR VK  V +FIL SS  GYLI               GFLGLQ+SD
Sbjct: 652  STFNELVELQVENHIRDVKQPVREFILTSSAFGYLIDSKSDAAVTKVVQQIGFLGLQVSD 711

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            +GK YSKTLVED+ASHF   YP +  +YP+A+YGLI+  FFHGLD YEE+ HSIS REV+
Sbjct: 712  RGKLYSKTLVEDLASHFLSKYPANLFDYPSAQYGLIQNSFFHGLDAYEEMAHSISTREVI 771

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVN-ARKSHSLFPAG 2273
            VRSSRGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQFDY V    +S SLFPAG
Sbjct: 772  VRSSRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFDYGVKVGTESQSLFPAG 831

Query: 2272 EPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCG 2093
            EPVGVLAATAMSNPAYKAVLDS+PSSN+SW++MKEILLC+V F ND  DRRVILYLNDCG
Sbjct: 832  EPVGVLAATAMSNPAYKAVLDSTPSSNSSWDMMKEILLCKVGFKNDLADRRVILYLNDCG 891

Query: 2092 CGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKML 1913
            CGR YCQERAAY+VKN L++VSLKD A  F+IEYK  Q + ES  +D GLVGH+HL+K  
Sbjct: 892  CGRNYCQERAAYLVKNHLEKVSLKDIAKCFMIEYKS-QQIPESFGSDAGLVGHVHLDKRK 950

Query: 1912 LEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMP 1733
            L++L+I+   IL KCQET                  KT L VSE CSFQQ   +     P
Sbjct: 951  LQDLNITAQVILEKCQET---VNSFRKKKKVGNLFKKTILLVSESCSFQQFIDES----P 1003

Query: 1732 CLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNP 1553
            CLMF  Q  +++ +L++ S +LA+MI PVLLETIIKGD RI  ANIIW +P+TTTWIRNP
Sbjct: 1004 CLMFFWQ-GADDVHLERTSNILADMICPVLLETIIKGDHRISCANIIWATPETTTWIRNP 1062

Query: 1552 SKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGIS 1373
            S+ QKGELALD+VLEKSVVK+SGDAWR VLDSCLPV HLI+T RS+PYAIKQVQELLG+S
Sbjct: 1063 SRTQKGELALDIVLEKSVVKKSGDAWRIVLDSCLPVLHLINTTRSIPYAIKQVQELLGVS 1122

Query: 1372 CAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPF 1193
            CAF+ AVQRLS SVTMVAKG+LKEHLILL NSMTCAG+L+GF +GGYK LSRSL+I+VPF
Sbjct: 1123 CAFDTAVQRLSKSVTMVAKGVLKEHLILLGNSMTCAGSLIGFYTGGYKTLSRSLDIQVPF 1182

Query: 1192 TEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQED 1013
            TEATLFTPRKCFEKAAEKCHTD+LSS+VA+C+WGKHV VGTGS FDVLWDTK    N E 
Sbjct: 1183 TEATLFTPRKCFEKAAEKCHTDSLSSIVASCAWGKHVTVGTGSHFDVLWDTKEACLNPEG 1242

Query: 1012 GIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEIDWSLSPEHNLSSDKPVFEDFVE 839
             +D Y+FL+MVRS+ G  ES T CLG EVD  MLEDE DW+LSPEHN SSDKP FED  E
Sbjct: 1243 SMDAYSFLNMVRSTAGGEESVTACLGAEVDDLMLEDE-DWNLSPEHNSSSDKPTFEDSAE 1301

Query: 838  DQSWLENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWE-KLGTPIAN--SS 668
             Q +L N+   +NWE++S+     +S   G W+ +   G   E  W   + T  AN  +S
Sbjct: 1302 FQDFLGNQPAESNWEKISSLKDRPRSS--GNWDVDKNDGAVKEKPWSLGMNTAEANDVAS 1359

Query: 667  SEWGTDASWGKSSGDKLENVGSTTKPSSGWGTESWGKSSGDKQENVGRSDIKPSSGWGKS 488
            S W T  +   ++   LEN  + +   SGW T+                  +P +G+   
Sbjct: 1360 SGWDTATARMTNNSWNLENNVAQSNSFSGWATKKH----------------EPHNGF--- 1400

Query: 487  SEEKMEKVGSPAKSSSEWGTEASWGKSSGDKLENVGSPATKPSSGWGK-SSGDKQ-ENVG 314
                + KV     +S++W   A+WG+   D   N  +      S WGK + GD+  +N  
Sbjct: 1401 ----VTKVQEEPTTSNDWDAGAAWGRKDRD---NKFAETNTTKSWWGKVTDGDESGQNKS 1453

Query: 313  RSDINPSSGWGTKASWGKSSEEKMEKVGSPAKSSSEWGTEASWGKSSGDKQENVGSPATK 134
            ++        GT     K S++++   G  +K++ E  TE+    S G+      +   K
Sbjct: 1454 KNKRPEDQDVGTHGWVDKMSQDQLIS-GWASKTTREATTESLSWDSKGNSNPGDAACGWK 1512

Query: 133  PSSGWG--KSSGDK--QENVGSSATKPSTGWGTRAS------WGKSSE 20
             +S WG   ++GDK   + V S+    ++GWG   S      WG   E
Sbjct: 1513 AASTWGAENTAGDKLWGKEVSSNQADTASGWGKPKSPEISLGWGSPKE 1560



 Score = 72.0 bits (175), Expect = 4e-09
 Identities = 72/270 (26%), Positives = 103/270 (38%), Gaps = 29/270 (10%)
 Frame = -1

Query: 823  ENKQENTNWEEVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGTDAS 644
            E   E+ +W+   + G+    DA  GW + +  G  +    +  G  +  SS++  T + 
Sbjct: 1488 EATTESLSWD---SKGNSNPGDAACGWKAASTWGAENTAGDKLWGKEV--SSNQADTASG 1542

Query: 643  WGKSSGDKLENVGSTTKPS----SGWGTESWGKSSGDKQENVGRSDI-KPSSGWGKSSEE 479
            WGK    ++     + K S     GWG  S G     K EN   +   K + GWG     
Sbjct: 1543 WGKPKSPEISLGWGSPKESVKSVRGWGASSSGGGRDKKTENQSLAGQGKEAGGWGNKLTS 1602

Query: 478  KMEKVGSPAKSSSEWGTEASWG--KSSGDKLENVGSPATKPSSGWGKSSG--DKQENVGR 311
                 GS             WG  K SG ++   G P    +S  G  SG  +K EN   
Sbjct: 1603 NQADTGSGWGKPKSSENSQGWGLSKESGKEVHGWGVP----NSAGGNRSGTNNKNENQSL 1658

Query: 310  SDINPSSGWGTKAS---------WGK-SSEEKMEKVGS---PAKSSSEWGTEASWGKSSG 170
             +    SGW  KAS         WGK  S    E  GS   P K+   WG   S G +  
Sbjct: 1659 VEQGKESGWDNKASSNQEAMASGWGKPKSPALSEGWGSPREPVKAVHGWGVPHSGGGNGS 1718

Query: 169  DKQENVGSPAT-------KPSSGWGKSSGD 101
             + +  G  +        + S GWG ++GD
Sbjct: 1719 GRDQQWGQQSREFKKDRFEGSRGWGLNNGD 1748


>gb|KJB67888.1| hypothetical protein B456_010G216600 [Gossypium raimondii]
          Length = 1406

 Score = 1552 bits (4018), Expect = 0.0
 Identities = 801/1150 (69%), Positives = 926/1150 (80%), Gaps = 3/1150 (0%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSDLS +ML+KVLKQVEII+SSRSGTPNFES EVEANDLQ AV QYL+VRGT K+SR +
Sbjct: 230  MSSDLSTSMLRKVLKQVEIIKSSRSGTPNFESHEVEANDLQSAVEQYLQVRGTVKASRSI 289

Query: 3883 DAHYGTSQDPN-SSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA YG ++D + SSTKAWLEKMRTLFIRKGSGFSSRSVITGD YKKVNEIG+P EIAQRI
Sbjct: 290  DARYGVNKDASDSSTKAWLEKMRTLFIRKGSGFSSRSVITGDPYKKVNEIGIPSEIAQRI 349

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERVN+HN++YLQ LVDNKLCLTYRDG S+YSLREGSKGHTFLRPGQVVHRRIMDGDI
Sbjct: 350  TFEERVNMHNMRYLQNLVDNKLCLTYRDGGSTYSLREGSKGHTFLRPGQVVHRRIMDGDI 409

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQALSVYVHDDHTVKINPLIC PLSADFDGDCIHLFYPQSL+AKAEV
Sbjct: 410  VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICGPLSADFDGDCIHLFYPQSLSAKAEV 469

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
             ELFSVEKQLLSSH+GNLNLQLATD+LLSL+VM K +   KA AQQL+MF+ S LP PA 
Sbjct: 470  YELFSVEKQLLSSHSGNLNLQLATDSLLSLRVMLKTFLFKKADAQQLSMFLSSALPEPAF 529

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
             K +   P WTA QILQ+  PACLDC  DRYLI KS++LK DF++D++QSVINE+V SIF
Sbjct: 530  LKCNHVAPCWTAFQILQTAFPACLDCSSDRYLIGKSDILKVDFNKDLMQSVINEVVASIF 589

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            +EKGP+EV+ FFDSLQPLLMEN+FA+GF+V LEDFS+S+  ++NI ++IQ I  LLY  R
Sbjct: 590  YEKGPKEVLNFFDSLQPLLMENIFAEGFTVCLEDFSVSREVIENIQKDIQVISPLLYQLR 649

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+HIR  K  +A FILK+S+LG LI               GFLG+QLSD
Sbjct: 650  STYNELVELQMENHIRVAKEPIADFILKTSSLGNLIDSRSDSAVNKVVQQIGFLGMQLSD 709

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KGKFYSKTLVEDVA  F+ IYP D  +YP+A++GLIK CFF GLDPYE IVHSIS REVM
Sbjct: 710  KGKFYSKTLVEDVAHQFQSIYPSDAIDYPSAEFGLIKSCFFRGLDPYEGIVHSISTREVM 769

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNARKSHSLFPAGE 2270
            VRS+RGLSEPGTLFKNLMA+LRDVVICYDGTVRNV SNSIIQF Y ++AR +   FPAGE
Sbjct: 770  VRSTRGLSEPGTLFKNLMAILRDVVICYDGTVRNVSSNSIIQFQYGLSAR-TRPQFPAGE 828

Query: 2269 PVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDCGC 2090
            PVGVLAATAMSNPAYKAVLDSSPSSN+SWELMKEILLC+VSF NDPIDRRVILYL DC C
Sbjct: 829  PVGVLAATAMSNPAYKAVLDSSPSSNSSWELMKEILLCKVSFKNDPIDRRVILYLKDCDC 888

Query: 2089 GREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKMLL 1910
            GR+YCQE AAY+VKN L+RV LKD AV+F+IEY++ Q V    E + GLVGHI LNK LL
Sbjct: 889  GRKYCQENAAYLVKNHLRRVKLKDIAVDFIIEYQQQQIV---SEIEAGLVGHILLNKDLL 945

Query: 1909 EELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNMPC 1730
            +EL +S+ EI  KCQET                  +T L VSE CS QQSC D   +MPC
Sbjct: 946  KELSVSVQEIHMKCQET---INSFRKKKKTAETFKRTDLFVSESCSIQQSCVDKWLDMPC 1002

Query: 1729 LMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRNPS 1550
            LMF  + T++++ LD    +LA++IYPVLL+T+IKGDPRI SA IIW++PD TTWIRNPS
Sbjct: 1003 LMFFFRNTNDDN-LDSAIQILADIIYPVLLQTVIKGDPRICSAKIIWVNPDATTWIRNPS 1061

Query: 1549 KIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGISC 1370
            K QKGELAL+VVLEKS VKQ+GDAWRTV+D CLPV ++IDT RS+PYAIKQV++LLGISC
Sbjct: 1062 KTQKGELALEVVLEKSAVKQNGDAWRTVIDCCLPVLNIIDTHRSIPYAIKQVEQLLGISC 1121

Query: 1369 AFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVPFT 1190
            AFE+AVQRLS SV+MV +G+LKEHL+LLANSMTC GNL+GFNSGGYK LSRSLNI+VPFT
Sbjct: 1122 AFEQAVQRLSTSVSMVTRGVLKEHLMLLANSMTCCGNLIGFNSGGYKTLSRSLNIQVPFT 1181

Query: 1189 EATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQEDG 1010
            EATLFTPRKCFE+AAEKC+ D+LSS+VA+CSWGK VAVGTGSRFD+LW+ +  G +Q  G
Sbjct: 1182 EATLFTPRKCFERAAEKCYDDSLSSIVASCSWGKRVAVGTGSRFDLLWN-QESGSDQMSG 1240

Query: 1009 IDVYNFLHMVRSSTGIVESDTGCLGEEVDMLEDEIDWSLSPEHNLSSDKPVFEDFVEDQS 830
            +DVYNFLHMV S  G   S+T CLGEEVD L DE  W LSP+H+   DKPVFED  E ++
Sbjct: 1241 MDVYNFLHMV-SGAGGSNSNTACLGEEVDDLMDE--WCLSPDHSTGLDKPVFEDAAEFEN 1297

Query: 829  WLENKQENTNWE-EVSNNGSFQKSDAWGGWNSEAACGKSSEDKWEKLGTPIANSSSEWGT 653
             L+ +  + NWE +VS +          GWN  A       DK+    T  +   +EW  
Sbjct: 1298 NLDGQSASANWEKDVSLDKVSDVGWDASGWNKNA----EDVDKFAAAATS-SEKQNEW-- 1350

Query: 652  DASWGKSSGD 623
             + WG S  +
Sbjct: 1351 -SGWGASKSN 1359


>ref|XP_008465860.1| PREDICTED: DNA-directed RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072503|ref|XP_008465867.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
            gi|659072505|ref|XP_008465874.1| PREDICTED: DNA-directed
            RNA polymerase V subunit 1 [Cucumis melo]
          Length = 1964

 Score = 1544 bits (3997), Expect = 0.0
 Identities = 834/1438 (57%), Positives = 1010/1438 (70%), Gaps = 84/1438 (5%)
 Frame = -1

Query: 4063 MSSDLSVAMLKKVLKQVEIIRSSRSGTPNFESQEVEANDLQLAVGQYLEVRGTAKSSRDV 3884
            MSSD +V+MLKK+LKQVEII+ SRSG PNFES EVEANDLQLAV QYL+VRGT K+SR +
Sbjct: 234  MSSDPAVSMLKKILKQVEIIKGSRSGAPNFESHEVEANDLQLAVDQYLQVRGTVKASRGI 293

Query: 3883 DAHYGTSQDPNS-STKAWLEKMRTLFIRKGSGFSSRSVITGDAYKKVNEIGVPFEIAQRI 3707
            DA +G +++ N  STKAWLEKMRTLFIRKGSGFSSRSVITGDAYK VNEIGVPFE+AQRI
Sbjct: 294  DARFGVNKELNDPSTKAWLEKMRTLFIRKGSGFSSRSVITGDAYKLVNEIGVPFEVAQRI 353

Query: 3706 TFEERVNVHNIKYLQELVDNKLCLTYRDGSSSYSLREGSKGHTFLRPGQVVHRRIMDGDI 3527
            TFEERV+VHNI+YLQELVD KLCLTYRDGSS+YSLREGS GHT+L+PGQ+VHRRIMDGDI
Sbjct: 354  TFEERVSVHNIRYLQELVDKKLCLTYRDGSSAYSLREGSMGHTYLKPGQIVHRRIMDGDI 413

Query: 3526 VFINRPPTTHKHSLQALSVYVHDDHTVKINPLICAPLSADFDGDCIHLFYPQSLAAKAEV 3347
            VFINRPPTTHKHSLQAL VY+HDDH VKINPLIC  LSADFDGDCIHLFYPQS+AAKAEV
Sbjct: 414  VFINRPPTTHKHSLQALRVYLHDDHVVKINPLICGSLSADFDGDCIHLFYPQSIAAKAEV 473

Query: 3346 LELFSVEKQLLSSHNGNLNLQLATDALLSLKVMFKKYFLDKAFAQQLAMFVLSPLPRPAL 3167
            L LFSVEKQLLSSH+GNLNLQLA D+LLSLK+MF+KYFL KA AQQLAMFV S LP PAL
Sbjct: 474  LGLFSVEKQLLSSHSGNLNLQLANDSLLSLKMMFRKYFLGKAAAQQLAMFVSSYLPPPAL 533

Query: 3166 WKAHCSGPHWTALQILQSVLPACLDCCGDRYLIMKSEVLKGDFDRDIIQSVINEIVTSIF 2987
                    HWTALQILQ+VLPAC DC GD YLI  S  LK DFD+D + S+INEI+TSIF
Sbjct: 534  LGVRSGSLHWTALQILQTVLPACFDCHGDSYLIKNSNFLKFDFDKDAMPSLINEILTSIF 593

Query: 2986 FEKGPEEVMEFFDSLQPLLMENLFADGFSVSLEDFSLSKAALQNIHQEIQAIHSLLYHWR 2807
            F+KGPEEV++FFDSLQPLLME++F++GFSV L+D+S+  A LQ + + IQ +  LLY  R
Sbjct: 594  FQKGPEEVLKFFDSLQPLLMEHIFSEGFSVGLDDYSMPMAFLQALQKNIQVLSPLLYQLR 653

Query: 2806 STQNELVELQIESHIRHVKILVAKFILKSSTLGYLIXXXXXXXXXXXXXXAGFLGLQLSD 2627
            ST NELVELQ+E+H+R VK+    FILK S+LG L                GFLGLQLSD
Sbjct: 654  STFNELVELQLENHLRSVKVPFTNFILKLSSLGKLFDSKSESAINKVVQQIGFLGLQLSD 713

Query: 2626 KGKFYSKTLVEDVASHFERIYPMDP-NYPTAKYGLIKGCFFHGLDPYEEIVHSISNREVM 2450
            KG+FYSK+L+EDVAS F   Y  D  +YP+A++GL+KGCFFHGLDPYEE+VHSIS REVM
Sbjct: 714  KGRFYSKSLIEDVASLFHNRYSSDKIDYPSAEFGLVKGCFFHGLDPYEEMVHSISTREVM 773

Query: 2449 VRSSRGLSEPGTLFKNLMAVLRDVVICYDGTVRNVCSNSIIQFDYAVNA--RKSHSLFPA 2276
            VRSSRGL+EPGTLFKNLMA+LRDVVICYDGTVRNVCSNSIIQ +Y + A   + +SLFP 
Sbjct: 774  VRSSRGLTEPGTLFKNLMAILRDVVICYDGTVRNVCSNSIIQLEYGMKAGMMQPYSLFPP 833

Query: 2275 GEPVGVLAATAMSNPAYKAVLDSSPSSNNSWELMKEILLCRVSFNNDPIDRRVILYLNDC 2096
            GEPVGVLAATAMS PAYKAVLDS+PSSN+SW++MKEILLC+VSF N+PIDRRVILYLN+C
Sbjct: 834  GEPVGVLAATAMSTPAYKAVLDSTPSSNSSWDMMKEILLCKVSFKNEPIDRRVILYLNNC 893

Query: 2095 GCGREYCQERAAYMVKNQLKRVSLKDAAVEFLIEYKKPQTVLESLETDVGLVGHIHLNKM 1916
             CGR+YC E AAY+VK+ LK+V+LKD AV+F+IEY +  T         GLVGH+HLN+M
Sbjct: 894  ACGRKYCNENAAYVVKSHLKKVTLKDVAVDFMIEYNRQPT---PSGLGPGLVGHVHLNRM 950

Query: 1915 LLEELDISMHEILPKCQETXXXXXXXXXXXXXXXXXXKTSLSVSECCSFQQSCADDCSNM 1736
            LL+EL+I+M E+L +CQET                      ++SE C+F Q    +  +M
Sbjct: 951  LLKELNINMTEVLRRCQET-----MSSFKKKKKKVAHALRFAISEHCAFHQWNGVESIDM 1005

Query: 1735 PCLMFVLQETSENSYLDKLSGVLANMIYPVLLETIIKGDPRIYSANIIWISPDTTTWIRN 1556
            PCL+F     + + +L++ + +LA++++P+L ETIIKGDPRI SA++IWISPD+T+W +N
Sbjct: 1006 PCLIF--WHETRDVHLERTAHILADIVFPLLSETIIKGDPRIKSASVIWISPDSTSWQKN 1063

Query: 1555 PSKIQKGELALDVVLEKSVVKQSGDAWRTVLDSCLPVFHLIDTRRSVPYAIKQVQELLGI 1376
            PS+ Q GELALDV LEKS +KQ+GDAWR VLD CLPV HLIDTRRSVPYAIKQVQELLGI
Sbjct: 1064 PSRWQDGELALDVCLEKSALKQNGDAWRNVLDCCLPVLHLIDTRRSVPYAIKQVQELLGI 1123

Query: 1375 SCAFERAVQRLSASVTMVAKGILKEHLILLANSMTCAGNLVGFNSGGYKALSRSLNIEVP 1196
            SCAF++ +QRLS SV+MV+KG+L +HLILLANSMTC GN++GFNSGGYKALSR+LNI+VP
Sbjct: 1124 SCAFDQMIQRLSKSVSMVSKGVLGDHLILLANSMTCTGNMIGFNSGGYKALSRALNIQVP 1183

Query: 1195 FTEATLFTPRKCFEKAAEKCHTDNLSSVVAACSWGKHVAVGTGSRFDVLWDTKNEGFNQE 1016
            FTEATLFTPRKCFEKAAEKCH D+LSS+VA+CSWGKHVAVGTGSRFD+LWD K  G  Q+
Sbjct: 1184 FTEATLFTPRKCFEKAAEKCHKDSLSSIVASCSWGKHVAVGTGSRFDILWDQKELGCKQD 1243

Query: 1015 DGIDVYNFLHMVRSSTGIVESDTGCLGEEVD--MLEDEI-DWSLSPEHNLSSDKPVFEDF 845
            D +DVYNFLHMVRS     E  + CLGEEV+  M+EDE  + +LSPE   +S+KPVFED 
Sbjct: 1244 DVVDVYNFLHMVRSGKS-EEPTSACLGEEVEDIMVEDEYGELTLSPEPFSTSEKPVFEDS 1302

Query: 844  VEDQSWLENKQENTNWE---------------EVSNNGSFQKS---DAWGGWNSEAACGK 719
             E +  L+N    + WE               E + NG   KS   + W GW  +A    
Sbjct: 1303 AEFEHCLDNDPGESKWEKAPSLGAVSTGGGQWESNGNGKATKSSDDNDWSGWGRKAEPDV 1362

Query: 718  SSEDKWEKLGTPIANSSSEWG-------TDASWGKSSGDKLENVGST----TKPSSGWGT 572
            +  +  E       +++S WG        D  W   S  ++E    T    T  S GW T
Sbjct: 1363 TVTNAQENTSNSAWDTTSSWGNKATITSNDNDWSNCSTKEVERDSFTSMEKTPKSGGWDT 1422

Query: 571  ES-WGKSSGDKQENVGRSDIKPSSGWGKSSEEKME------KVGSPAKSSSEW------- 434
             S WG  + D   N G +  + S+ W    ++K E      K    A  SS W       
Sbjct: 1423 ASTWGTKTKDDSFN-GETAPEKSNQWSSLQKDKAETQDAFHKKAEMASKSSGWEDKAWSR 1481

Query: 433  ---GTEASWGKSSGDKLENVGSPATKPSS---GWGKSSGDKQENVGRSDINPSSGWG--- 281
                TE +W     DK E+   P  K SS   GWG + G  + + G  D    +GW    
Sbjct: 1482 GTSKTEDNWSGQVKDKAESFQVPVQKVSSKTNGWGSTGGWTKNSGG--DHQAEAGWNDGQ 1539

Query: 280  -------TKASWGKSSEEKMEKVGSPAKSSSEWGTEA---------SWGKSSGDKQENVG 149
                       W + + +K+E     +  +S WG+           S     GD   N  
Sbjct: 1540 ASMDREEASDRWDRKATQKLE-----SHQTSSWGSPTVCDSKDSFPSKAVDHGDSVVNHS 1594

Query: 148  SPATK-PSSGWGKSSGDKQENVGSSATKPS--------TGWGTRASWGKSSEEKMEKV 2
                K P +  G  +   Q+       KPS        +GWG++    + S+   ++V
Sbjct: 1595 WDRQKSPEASQGFGNDAWQQQKSQDVIKPSHANNESNRSGWGSQIESNEGSDHGFDQV 1652