BLASTX nr result
ID: Zanthoxylum22_contig00013316
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00013316
(1271 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006444725.1| hypothetical protein CICLE_v10021531mg [Citr... 407 e-111
gb|KDO86621.1| hypothetical protein CISIN_1g022096mg [Citrus sin... 382 e-103
ref|XP_006444727.1| hypothetical protein CICLE_v10021531mg [Citr... 382 e-103
ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ri... 288 9e-75
ref|XP_010661497.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 283 2e-73
ref|XP_004140529.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 278 5e-72
ref|XP_008459818.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 278 9e-72
ref|XP_010661496.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 271 1e-69
ref|XP_002320231.2| hypothetical protein POPTR_0014s10140g [Popu... 264 1e-67
gb|KFK42499.1| hypothetical protein AALP_AA1G001400 [Arabis alpina] 263 3e-67
ref|XP_011039304.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 261 7e-67
ref|XP_006418378.1| hypothetical protein EUTSA_v10008355mg [Eutr... 260 2e-66
ref|XP_009119667.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 259 3e-66
ref|XP_013666348.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop... 259 3e-66
emb|CDX90008.1| BnaA10g00740D [Brassica napus] 259 3e-66
ref|XP_013586384.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 258 8e-66
ref|XP_013696288.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 258 8e-66
ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp.... 256 3e-65
ref|XP_004306614.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 255 6e-65
ref|NP_171616.1| RNA-binding (RRM/RBD/RNP motifs) family protein... 254 1e-64
>ref|XP_006444725.1| hypothetical protein CICLE_v10021531mg [Citrus clementina]
gi|567904476|ref|XP_006444726.1| hypothetical protein
CICLE_v10021531mg [Citrus clementina]
gi|568876610|ref|XP_006491370.1| PREDICTED: 31 kDa
ribonucleoprotein, chloroplastic-like isoform X1 [Citrus
sinensis] gi|557546987|gb|ESR57965.1| hypothetical
protein CICLE_v10021531mg [Citrus clementina]
gi|557546988|gb|ESR57966.1| hypothetical protein
CICLE_v10021531mg [Citrus clementina]
gi|641867936|gb|KDO86620.1| hypothetical protein
CISIN_1g022096mg [Citrus sinensis]
Length = 284
Score = 407 bits (1047), Expect = e-111
Identities = 209/284 (73%), Positives = 233/284 (82%)
Frame = -3
Query: 1206 APATACLTXXXXSLFTKITPPTLPKRFVSFSLPNLINFQYPKLSSCWPPSNPSRFGSVLA 1027
A AT LT LFTKITPP PKRF SLP LINFQYPKLSSCW S+P+ F SVLA
Sbjct: 2 AAATGFLTTSSS-LFTKITPPATPKRFGFTSLPTLINFQYPKLSSCWSRSHPAGFRSVLA 60
Query: 1026 VEDAEAVAFEXXXXXXXXXXXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMF 847
V D EAV E VEEP++RARPCELYVCNLPRS D +ELLEMF
Sbjct: 61 VVDEEAVVVEDEINGKDNVGGNEVDDDSSVEEPRSRARPCELYVCNLPRSFDISELLEMF 120
Query: 846 KPFGTVISVEVSRNPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMN 667
KPFGTV+SVEVSRNPETGISRGC Y+TMGSINSAKNAIIALDGSD+GGREMRVRFS+DMN
Sbjct: 121 KPFGTVLSVEVSRNPETGISRGCGYLTMGSINSAKNAIIALDGSDVGGREMRVRFSIDMN 180
Query: 666 SRTRDTETLISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRG 487
SRTR+ E LISPPKKIFVYESP+KLYVGN+SWA+KP+DL++HF +FG+VVS RVLHDR+G
Sbjct: 181 SRTRNAEALISPPKKIFVYESPHKLYVGNLSWAVKPEDLRNHFGRFGTVVSARVLHDRKG 240
Query: 486 RTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMIVKVGVDRTES 355
+TTRVFGF+SFSS AERDAALSLNGTDF GR++IV+ GVDRTES
Sbjct: 241 QTTRVFGFISFSSDAERDAALSLNGTDFRGRTIIVREGVDRTES 284
>gb|KDO86621.1| hypothetical protein CISIN_1g022096mg [Citrus sinensis]
Length = 302
Score = 382 bits (981), Expect = e-103
Identities = 196/266 (73%), Positives = 217/266 (81%)
Frame = -3
Query: 1206 APATACLTXXXXSLFTKITPPTLPKRFVSFSLPNLINFQYPKLSSCWPPSNPSRFGSVLA 1027
A AT LT LFTKITPP PKRF SLP LINFQYPKLSSCW S+P+ F SVLA
Sbjct: 2 AAATGFLTTSSS-LFTKITPPATPKRFGFTSLPTLINFQYPKLSSCWSRSHPAGFRSVLA 60
Query: 1026 VEDAEAVAFEXXXXXXXXXXXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMF 847
V D EAV E VEEP++RARPCELYVCNLPRS D +ELLEMF
Sbjct: 61 VVDEEAVVVEDEINGKDNVGGNEVDDDSSVEEPRSRARPCELYVCNLPRSFDISELLEMF 120
Query: 846 KPFGTVISVEVSRNPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMN 667
KPFGTV+SVEVSRNPETGISRGC Y+TMGSINSAKNAIIALDGSD+GGREMRVRFS+DMN
Sbjct: 121 KPFGTVLSVEVSRNPETGISRGCGYLTMGSINSAKNAIIALDGSDVGGREMRVRFSIDMN 180
Query: 666 SRTRDTETLISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRG 487
SRTR+ E LISPPKKIFVYESP+KLYVGN+SWA+KP+DL++HF +FG+VVS RVLHDR+G
Sbjct: 181 SRTRNAEALISPPKKIFVYESPHKLYVGNLSWAVKPEDLRNHFGRFGTVVSARVLHDRKG 240
Query: 486 RTTRVFGFLSFSSVAERDAALSLNGT 409
+TTRVFGF+SFSS AERDAALSLNGT
Sbjct: 241 QTTRVFGFISFSSDAERDAALSLNGT 266
>ref|XP_006444727.1| hypothetical protein CICLE_v10021531mg [Citrus clementina]
gi|557546989|gb|ESR57967.1| hypothetical protein
CICLE_v10021531mg [Citrus clementina]
Length = 267
Score = 382 bits (981), Expect = e-103
Identities = 196/266 (73%), Positives = 217/266 (81%)
Frame = -3
Query: 1206 APATACLTXXXXSLFTKITPPTLPKRFVSFSLPNLINFQYPKLSSCWPPSNPSRFGSVLA 1027
A AT LT LFTKITPP PKRF SLP LINFQYPKLSSCW S+P+ F SVLA
Sbjct: 2 AAATGFLTTSSS-LFTKITPPATPKRFGFTSLPTLINFQYPKLSSCWSRSHPAGFRSVLA 60
Query: 1026 VEDAEAVAFEXXXXXXXXXXXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMF 847
V D EAV E VEEP++RARPCELYVCNLPRS D +ELLEMF
Sbjct: 61 VVDEEAVVVEDEINGKDNVGGNEVDDDSSVEEPRSRARPCELYVCNLPRSFDISELLEMF 120
Query: 846 KPFGTVISVEVSRNPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMN 667
KPFGTV+SVEVSRNPETGISRGC Y+TMGSINSAKNAIIALDGSD+GGREMRVRFS+DMN
Sbjct: 121 KPFGTVLSVEVSRNPETGISRGCGYLTMGSINSAKNAIIALDGSDVGGREMRVRFSIDMN 180
Query: 666 SRTRDTETLISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRG 487
SRTR+ E LISPPKKIFVYESP+KLYVGN+SWA+KP+DL++HF +FG+VVS RVLHDR+G
Sbjct: 181 SRTRNAEALISPPKKIFVYESPHKLYVGNLSWAVKPEDLRNHFGRFGTVVSARVLHDRKG 240
Query: 486 RTTRVFGFLSFSSVAERDAALSLNGT 409
+TTRVFGF+SFSS AERDAALSLNGT
Sbjct: 241 QTTRVFGFISFSSDAERDAALSLNGT 266
>ref|XP_002515076.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223545556|gb|EEF47060.1| ribonucleoprotein,
chloroplast, putative [Ricinus communis]
Length = 281
Score = 288 bits (736), Expect = 9e-75
Identities = 152/280 (54%), Positives = 188/280 (67%), Gaps = 17/280 (6%)
Frame = -3
Query: 1146 PTLPKRFVSFSLPNLINFQYPKLS-----------------SCWPPSNPSRFGSVLAVED 1018
P+LP SF P L + +PK S S WP + R ++LA+ +
Sbjct: 8 PSLPS---SFRTPTLPSLPFPKFSCFLQSHSREIPLLSSSSSLWPANKSKRVFAILALVN 64
Query: 1017 AEAVAFEXXXXXXXXXXXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMFKPF 838
E+V E + K + RPCELYVCNLPRSCD AEL+E+FKP+
Sbjct: 65 EESVVAEEVDREENENESEEDELG---RQLKKQPRPCELYVCNLPRSCDIAELVELFKPY 121
Query: 837 GTVISVEVSRNPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMNSRT 658
GTVISVEVSRNPETGISRGC +VTMGSINSAKNAI ALDGSD+GGREMRV+FSVDMNS
Sbjct: 122 GTVISVEVSRNPETGISRGCGFVTMGSINSAKNAIAALDGSDIGGREMRVKFSVDMNSGR 181
Query: 657 RDTETLISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTT 478
R+ E L S P K YESP+K+YVGN++W +KP++L+D FS+FG+VVS RVL+DR+
Sbjct: 182 RNPEPLSSAPTKNLFYESPFKVYVGNLAWTVKPEELRDQFSKFGTVVSARVLYDRKAGKN 241
Query: 477 RVFGFLSFSSVAERDAALSLNGTDFGGRSMIVKVGVDRTE 358
R +GFLSFSS ERDAALS NG DF GR ++V+ GV+R +
Sbjct: 242 RAYGFLSFSSTKERDAALSFNGKDFRGRILVVRKGVERED 281
>ref|XP_010661497.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X2
[Vitis vinifera]
Length = 269
Score = 283 bits (725), Expect = 2e-73
Identities = 151/265 (56%), Positives = 188/265 (70%), Gaps = 1/265 (0%)
Frame = -3
Query: 1146 PTLPKRFVSFSLPNLINFQYPKLSSCWPPS-NPSRFGSVLAVEDAEAVAFEXXXXXXXXX 970
PT PKR+VS SLP+ I+F +PKLS S + +RF +V+AV AE + +
Sbjct: 22 PTAPKRYVSSSLPSSIHFAHPKLSCSISISLSRTRFSTVVAVA-AEDINTDDSSP----- 75
Query: 969 XXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGI 790
+E K+ RPCELYVCNLPRSC +ELL MFKP GTV S+EV RN ETG+
Sbjct: 76 -----------QESKSSVRPCELYVCNLPRSCGISELLSMFKPHGTVQSIEVCRNAETGV 124
Query: 789 SRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMNSRTRDTETLISPPKKIFVY 610
SRG YVTM S+ AK AI ALDGSD+GGREMRVRFS DMN R R++E L S P + ++
Sbjct: 125 SRGSGYVTMSSMREAKAAIAALDGSDVGGREMRVRFSTDMNFRRRNSEALNSAPMRNLIF 184
Query: 609 ESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDA 430
ESPYKLYVGN++WAIKP+DL++HFSQFG+VVS RV+HDR+ R +GFLSFSS AE +A
Sbjct: 185 ESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHDRKAGKHRAYGFLSFSSAAECEA 244
Query: 429 ALSLNGTDFGGRSMIVKVGVDRTES 355
A+SLNG +F GRS++V G+ R ES
Sbjct: 245 AMSLNGKEFRGRSLVVSAGMKRVES 269
>ref|XP_004140529.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis
sativus] gi|778711941|ref|XP_011656820.1| PREDICTED: 28
kDa ribonucleoprotein, chloroplastic [Cucumis sativus]
gi|778711944|ref|XP_011656821.1| PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic [Cucumis sativus]
gi|700191269|gb|KGN46473.1| hypothetical protein
Csa_6G095890 [Cucumis sativus]
Length = 286
Score = 278 bits (712), Expect = 5e-72
Identities = 132/194 (68%), Positives = 166/194 (85%)
Frame = -3
Query: 936 EEPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGS 757
+E K ARPCELYVCNLPRSCD AEL+EMFKP+GTV++ EVSRNPETGIS+GC YVTMGS
Sbjct: 93 QEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGS 152
Query: 756 INSAKNAIIALDGSDLGGREMRVRFSVDMNSRTRDTETLISPPKKIFVYESPYKLYVGNI 577
INSAK +I ALDGSD+GGREMRVRF+VDMNS+ R+ L S PKK +YESPYK+YVGN+
Sbjct: 153 INSAKVSITALDGSDVGGREMRVRFAVDMNSKKRNLNNLHSSPKKNIIYESPYKVYVGNL 212
Query: 576 SWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGG 397
SW +KP DL++ FS+FG+VVS +VL+DRR +RV+GFLSFSS AERDA++SL+GT++
Sbjct: 213 SWDVKPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASISLDGTEYNN 272
Query: 396 RSMIVKVGVDRTES 355
R ++V+ G++R+ES
Sbjct: 273 RKLVVREGLERSES 286
>ref|XP_008459818.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis melo]
gi|659119741|ref|XP_008459819.1| PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic [Cucumis melo]
gi|659119743|ref|XP_008459820.1| PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic [Cucumis melo]
Length = 284
Score = 278 bits (710), Expect = 9e-72
Identities = 144/254 (56%), Positives = 183/254 (72%)
Frame = -3
Query: 1116 SLPNLINFQYPKLSSCWPPSNPSRFGSVLAVEDAEAVAFEXXXXXXXXXXXXXXXXXXXV 937
S P+ +F Y KL S ++ RF + V D E+ E
Sbjct: 36 SFPSSFHFDYTKLVSL-RHNHGERFPVLFTVLDNESALTEEAIVEGDVKSESSVSN---- 90
Query: 936 EEPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGS 757
+E K ARPCELYVCNLPRSCD AEL+EMFKP+GTV++ EVSRNPETGIS+GC YVTMGS
Sbjct: 91 QEVKKLARPCELYVCNLPRSCDIAELVEMFKPYGTVLAAEVSRNPETGISKGCGYVTMGS 150
Query: 756 INSAKNAIIALDGSDLGGREMRVRFSVDMNSRTRDTETLISPPKKIFVYESPYKLYVGNI 577
INSAK +I ALDGSD+GGREMRVRF+VDMN + R+ L S PKK +YESPYK+YVGN+
Sbjct: 151 INSAKVSIAALDGSDVGGREMRVRFAVDMNPKNRNLNNLNSSPKKNIIYESPYKVYVGNL 210
Query: 576 SWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGG 397
SW ++P DL++ FS+FG+VVS +VL+DRR +RV+GFLSFSS AERDA++SL+GT+F
Sbjct: 211 SWDVQPGDLRNLFSRFGTVVSAKVLNDRRAGKSRVYGFLSFSSAAERDASISLDGTEFNK 270
Query: 396 RSMIVKVGVDRTES 355
R ++V+ G +R+ES
Sbjct: 271 RKLVVREGFERSES 284
>ref|XP_010661496.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic isoform X1
[Vitis vinifera]
Length = 291
Score = 271 bits (692), Expect = 1e-69
Identities = 151/287 (52%), Positives = 188/287 (65%), Gaps = 23/287 (8%)
Frame = -3
Query: 1146 PTLPKRFVSFSLPNLINFQYPKLSSCWPPS-NPSRFGSVLAVEDAEAVAFEXXXXXXXXX 970
PT PKR+VS SLP+ I+F +PKLS S + +RF +V+AV AE + +
Sbjct: 22 PTAPKRYVSSSLPSSIHFAHPKLSCSISISLSRTRFSTVVAVA-AEDINTDDSSP----- 75
Query: 969 XXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGI 790
+E K+ RPCELYVCNLPRSC +ELL MFKP GTV S+EV RN ETG+
Sbjct: 76 -----------QESKSSVRPCELYVCNLPRSCGISELLSMFKPHGTVQSIEVCRNAETGV 124
Query: 789 SRGCCYVTMGSINSAKNAIIALDGS----------------------DLGGREMRVRFSV 676
SRG YVTM S+ AK AI ALDGS D+GGREMRVRFS
Sbjct: 125 SRGSGYVTMSSMREAKAAIAALDGSLQHLSLSLSIKESFTRLSPAVKDVGGREMRVRFST 184
Query: 675 DMNSRTRDTETLISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHD 496
DMN R R++E L S P + ++ESPYKLYVGN++WAIKP+DL++HFSQFG+VVS RV+HD
Sbjct: 185 DMNFRRRNSEALNSAPMRNLIFESPYKLYVGNLAWAIKPEDLRNHFSQFGTVVSARVVHD 244
Query: 495 RRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMIVKVGVDRTES 355
R+ R +GFLSFSS AE +AA+SLNG +F GRS++V G+ R ES
Sbjct: 245 RKAGKHRAYGFLSFSSAAECEAAMSLNGKEFRGRSLVVSAGMKRVES 291
>ref|XP_002320231.2| hypothetical protein POPTR_0014s10140g [Populus trichocarpa]
gi|550323885|gb|EEE98546.2| hypothetical protein
POPTR_0014s10140g [Populus trichocarpa]
Length = 287
Score = 264 bits (674), Expect = 1e-67
Identities = 146/276 (52%), Positives = 183/276 (66%), Gaps = 5/276 (1%)
Frame = -3
Query: 1167 LFTKITPPTLPKRFVSFSLPNLINFQYPKLSSCWPPSNP-----SRFGSVLAVEDAEAVA 1003
L TK PP+ +S P I Q+PKL SN +F +VLAV D E V
Sbjct: 19 LKTKTRPPSAAAASISSFCPP-IQLQHPKLCCSLSLSNTLCLRSRKFLAVLAVVDKETVI 77
Query: 1002 FEXXXXXXXXXXXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVIS 823
E E K +A+PCELYVCNLPRS D A+L+EMFKPFG+V+S
Sbjct: 78 TEEINHVREEIDDF--------ELKKKQAKPCELYVCNLPRSSDIADLVEMFKPFGSVLS 129
Query: 822 VEVSRNPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMNSRTRDTET 643
VEVSRNPETG+SRGC Y+TMGS+ SA+NA+ ALDGSD+GGREMRVR+SV+++S R+ E
Sbjct: 130 VEVSRNPETGVSRGCGYITMGSVESARNAVSALDGSDVGGREMRVRYSVEISSGRRNPEA 189
Query: 642 LISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGF 463
L S P K YESP+KLYVGN+ W+ KP +L++ F+ FG VVS RVL DR+G R + F
Sbjct: 190 LNSAPTKHLFYESPHKLYVGNLPWSTKPDELRNLFNHFGIVVSARVLSDRKGGKNRTYAF 249
Query: 462 LSFSSVAERDAALSLNGTDFGGRSMIVKVGVDRTES 355
LSF S AERDAALS+NGT+F R ++VK GV++ S
Sbjct: 250 LSFLSDAERDAALSMNGTEFYDRMLVVKRGVEKRPS 285
>gb|KFK42499.1| hypothetical protein AALP_AA1G001400 [Arabis alpina]
Length = 277
Score = 263 bits (671), Expect = 3e-67
Identities = 128/190 (67%), Positives = 159/190 (83%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
++RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNP+TG SRG YVTMGSINSAK
Sbjct: 88 KSRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAK 147
Query: 741 NAIIALDGSDLGGREMRVRFSVDMNSRT-RDTETLISPPKKIFVYESPYKLYVGNISWAI 565
NAI +LDG ++GGREMRVR+SVDMN T R+ E L S PKKI +YES YK+YVGN+ W
Sbjct: 148 NAITSLDGKEVGGREMRVRYSVDMNPGTSRNPEVLNSTPKKIMIYESQYKVYVGNLPWFT 207
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P L++HFS+FG++VS RVLHDR+ RVF FLSF+++ ER+AALSLNGT++ GR +I
Sbjct: 208 QPDGLREHFSKFGTIVSARVLHDRKTGRNRVFAFLSFTNLQERNAALSLNGTEYEGRKLI 267
Query: 384 VKVGVDRTES 355
V+ G++RTES
Sbjct: 268 VREGIERTES 277
>ref|XP_011039304.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Populus
euphratica]
Length = 309
Score = 261 bits (668), Expect = 7e-67
Identities = 145/278 (52%), Positives = 183/278 (65%), Gaps = 7/278 (2%)
Frame = -3
Query: 1167 LFTKITPPTLPKRFVSFSLPNLINFQYPKLSSCWPPSNPS-------RFGSVLAVEDAEA 1009
L + + T P S S I Q+PKL C S P+ +F +VLAV D E
Sbjct: 40 LSSPLKTKTRPAAAASISFSPPIQLQHPKL--CCSLSLPNTLCLRSRKFLAVLAVVDKET 97
Query: 1008 VAFEXXXXXXXXXXXXXXXXXXXVEEPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTV 829
V E E K +A+PCELYVCNLPRS D A+L+EMFKPFG+V
Sbjct: 98 VITEEINHVSEGIDDF--------ELKKKQAKPCELYVCNLPRSSDIADLVEMFKPFGSV 149
Query: 828 ISVEVSRNPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMNSRTRDT 649
+SVEVSRNPETG+SRGC Y+TMGS+ SA+NA+ ALDGSD+GGREMRVR+SV+++S R+
Sbjct: 150 LSVEVSRNPETGVSRGCGYITMGSVESARNAVSALDGSDVGGREMRVRYSVEISSGRRNP 209
Query: 648 ETLISPPKKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVF 469
E L S P K YESP+KLYVGN+ W+ KP +L++ F+ FG VVS RVL DR+G R +
Sbjct: 210 EALNSAPTKHLFYESPHKLYVGNLPWSTKPDELRNLFNHFGIVVSARVLSDRKGGKNRAY 269
Query: 468 GFLSFSSVAERDAALSLNGTDFGGRSMIVKVGVDRTES 355
FLSF S AERDAALS+NGT+F R ++VK GV++ S
Sbjct: 270 AFLSFLSDAERDAALSMNGTEFYDRMLVVKRGVEKRPS 307
>ref|XP_006418378.1| hypothetical protein EUTSA_v10008355mg [Eutrema salsugineum]
gi|567156511|ref|XP_006418379.1| hypothetical protein
EUTSA_v10008355mg [Eutrema salsugineum]
gi|557096149|gb|ESQ36731.1| hypothetical protein
EUTSA_v10008355mg [Eutrema salsugineum]
gi|557096150|gb|ESQ36732.1| hypothetical protein
EUTSA_v10008355mg [Eutrema salsugineum]
Length = 292
Score = 260 bits (665), Expect = 2e-66
Identities = 129/190 (67%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
+ RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNPETG SRG YVTMGSINSAK
Sbjct: 103 KPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPETGESRGSGYVTMGSINSAK 162
Query: 741 NAIIALDGSDLGGREMRVRFSVDMNSRT-RDTETLISPPKKIFVYESPYKLYVGNISWAI 565
AI +LDG+++GGREMRVR+SVDMN T R+ + L S PKKI +YES YK+YVGN+ W
Sbjct: 163 IAIASLDGTEVGGREMRVRYSVDMNPGTRRNPQVLNSTPKKILMYESQYKVYVGNLPWFT 222
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P L++HFS+FG++VS RVLHDR+ RVF FLSFS++ ERDAALSLNGT++ GR +I
Sbjct: 223 QPNGLREHFSRFGTIVSARVLHDRKNGKNRVFAFLSFSNLEERDAALSLNGTEYEGRRII 282
Query: 384 VKVGVDRTES 355
V+ GV++TES
Sbjct: 283 VREGVEKTES 292
>ref|XP_009119667.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Brassica rapa]
Length = 291
Score = 259 bits (663), Expect = 3e-66
Identities = 128/190 (67%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
+ RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNP+TG SRG +VTMGSINSAK
Sbjct: 102 KPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPQTGESRGSGFVTMGSINSAK 161
Query: 741 NAIIALDGSDLGGREMRVRFSVDMN-SRTRDTETLISPPKKIFVYESPYKLYVGNISWAI 565
NAI +LD ++GGREMRVR+SV+MN R++ L S PKKI +YES YK+YVGN+ W+
Sbjct: 162 NAIASLDMKEVGGREMRVRYSVEMNPGARRNSAALNSTPKKILMYESQYKVYVGNLPWST 221
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P DL+DHFS FG+VVS RVLHDR+ RVF FLSF+S+ ERDAALSLNGT++ GR +I
Sbjct: 222 QPDDLRDHFSSFGTVVSARVLHDRKTGKNRVFAFLSFASLEERDAALSLNGTEYEGRKII 281
Query: 384 VKVGVDRTES 355
V+ G++RTES
Sbjct: 282 VREGIERTES 291
>ref|XP_013666348.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Brassica
napus]
Length = 295
Score = 259 bits (662), Expect = 3e-66
Identities = 128/190 (67%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
+ RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNP+TG SRG +VTMGSINSAK
Sbjct: 106 KPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPQTGESRGSGFVTMGSINSAK 165
Query: 741 NAIIALDGSDLGGREMRVRFSVDMN-SRTRDTETLISPPKKIFVYESPYKLYVGNISWAI 565
NAI +LD ++GGREMRVR+SV+MN R++ L S PKKI +YES YK+YVGN+ W+
Sbjct: 166 NAIASLDMKEVGGREMRVRYSVEMNPGARRNSAALNSTPKKILMYESQYKVYVGNLPWST 225
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P DL+DHFS FG+VVS RVLHDR+ RVF FLSF+S+ ERDAALSLNGT++ GR +I
Sbjct: 226 QPDDLRDHFSSFGTVVSARVLHDRKTGKNRVFAFLSFASLEERDAALSLNGTEYEGRRII 285
Query: 384 VKVGVDRTES 355
V+ G++RTES
Sbjct: 286 VREGIERTES 295
>emb|CDX90008.1| BnaA10g00740D [Brassica napus]
Length = 293
Score = 259 bits (662), Expect = 3e-66
Identities = 128/190 (67%), Positives = 157/190 (82%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
+ RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNP+TG SRG +VTMGSINSAK
Sbjct: 104 KPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPQTGESRGSGFVTMGSINSAK 163
Query: 741 NAIIALDGSDLGGREMRVRFSVDMN-SRTRDTETLISPPKKIFVYESPYKLYVGNISWAI 565
NAI +LD ++GGREMRVR+SV+MN R++ L S PKKI +YES YK+YVGN+ W+
Sbjct: 164 NAIASLDMKEVGGREMRVRYSVEMNPGARRNSAALNSTPKKILMYESQYKVYVGNLPWST 223
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P DL+DHFS FG+VVS RVLHDR+ RVF FLSF+S+ ERDAALSLNGT++ GR +I
Sbjct: 224 QPDDLRDHFSSFGTVVSARVLHDRKTGKNRVFAFLSFASLEERDAALSLNGTEYEGRRII 283
Query: 384 VKVGVDRTES 355
V+ G++RTES
Sbjct: 284 VREGIERTES 293
>ref|XP_013586384.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform X1
[Brassica oleracea var. oleracea]
Length = 287
Score = 258 bits (659), Expect = 8e-66
Identities = 127/190 (66%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
+ RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNP++G SRG +VTMGSINSAK
Sbjct: 98 KPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPQSGESRGSGFVTMGSINSAK 157
Query: 741 NAIIALDGSDLGGREMRVRFSVDMNSRT-RDTETLISPPKKIFVYESPYKLYVGNISWAI 565
NAI +LD ++GGREMRVR+SV+MN T R++ L S PKKI +YES YK+YVGN+ W+
Sbjct: 158 NAIASLDMKEVGGREMRVRYSVEMNPGTRRNSAALNSTPKKILMYESQYKVYVGNLPWST 217
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P DL+DHFS FG+VVS RVLHDR+ RVF FLSF+++ ERDAALSLNGT++ GR +I
Sbjct: 218 QPDDLRDHFSSFGTVVSARVLHDRKTGKNRVFAFLSFANLEERDAALSLNGTEYEGRRII 277
Query: 384 VKVGVDRTES 355
V+ G++RTES
Sbjct: 278 VREGIERTES 287
>ref|XP_013696288.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Brassica
napus] gi|674918011|emb|CDY15203.1| BnaC05g00820D
[Brassica napus]
Length = 287
Score = 258 bits (659), Expect = 8e-66
Identities = 127/190 (66%), Positives = 158/190 (83%), Gaps = 1/190 (0%)
Frame = -3
Query: 921 RARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSINSAK 742
+ RPCELYVCN+PRS D A+LLEMF+PFGTVISVEVSRNP++G SRG +VTMGSINSAK
Sbjct: 98 KPRPCELYVCNIPRSYDIAQLLEMFQPFGTVISVEVSRNPQSGESRGSGFVTMGSINSAK 157
Query: 741 NAIIALDGSDLGGREMRVRFSVDMNSRT-RDTETLISPPKKIFVYESPYKLYVGNISWAI 565
NAI +LD ++GGREMRVR+SV+MN T R++ L S PKKI +YES YK+YVGN+ W+
Sbjct: 158 NAIASLDMKEVGGREMRVRYSVEMNPGTRRNSAALNSTPKKILMYESQYKVYVGNLPWST 217
Query: 564 KPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGGRSMI 385
+P DL+DHFS FG+VVS RVLHDR+ RVF FLSF+++ ERDAALSLNGT++ GR +I
Sbjct: 218 QPDDLRDHFSSFGTVVSARVLHDRKTGKNRVFAFLSFANLEERDAALSLNGTEYEGRRII 277
Query: 384 VKVGVDRTES 355
V+ G++RTES
Sbjct: 278 VREGIERTES 287
>ref|XP_002889386.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335228|gb|EFH65645.1| predicted protein
[Arabidopsis lyrata subsp. lyrata]
Length = 298
Score = 256 bits (654), Expect = 3e-65
Identities = 126/194 (64%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Frame = -3
Query: 933 EPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSI 754
EP + RPCELYVCN+PRS D A+LL+MF+PFGTVISVEVSRNP+TG SRG YVTMGSI
Sbjct: 105 EPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSI 164
Query: 753 NSAKNAIIALDGSDLGGREMRVRFSVDMN-SRTRDTETLISPPKKIFVYESPYKLYVGNI 577
NSAK AI +LDG+++GGREMRVR+SVDMN R+ E L S PKKI +YES YK+YVGN+
Sbjct: 165 NSAKIAIASLDGTEVGGREMRVRYSVDMNPGARRNPEVLNSTPKKILMYESQYKVYVGNL 224
Query: 576 SWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGG 397
W +P L+DHFS+FG++VS RVLHDR+ RVF FLSF++ ERDAALSLNGT + G
Sbjct: 225 PWFTQPDGLRDHFSKFGTIVSTRVLHDRKTGKNRVFAFLSFTNSEERDAALSLNGTQYEG 284
Query: 396 RSMIVKVGVDRTES 355
R +IV+ G++++E+
Sbjct: 285 RRIIVREGIEKSEA 298
>ref|XP_004306614.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Fragaria vesca
subsp. vesca]
Length = 293
Score = 255 bits (651), Expect = 6e-65
Identities = 140/263 (53%), Positives = 173/263 (65%), Gaps = 7/263 (2%)
Frame = -3
Query: 1146 PTLPKRFVSFSLPNLINFQYPK------LSSCWPPSNPSRFGSVLAVEDAEAVAFEXXXX 985
P KRFV S+P ++ YPK L++ S++A E+ + V
Sbjct: 27 PVALKRFVLSSVP--LSLSYPKNNRGGVLTALAVVEEEHAAVSLVAEEEEQVVGDNGYEE 84
Query: 984 XXXXXXXXXXXXXXXVEEPKNRA-RPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSR 808
E +NR RPCELYVCNLPRS D +L+EMFKP GTV SVEV R
Sbjct: 85 CERHNDDDVSGEEGLEMEKQNRQPRPCELYVCNLPRSSDIEDLMEMFKPHGTVFSVEVCR 144
Query: 807 NPETGISRGCCYVTMGSINSAKNAIIALDGSDLGGREMRVRFSVDMNSRTRDTETLISPP 628
+PETG+SRGC YVTMGSI+SAK AI ALDG D+ GREMRVRFSV M+ RTR++E L S P
Sbjct: 145 SPETGLSRGCGYVTMGSIDSAKAAIAALDGIDVAGREMRVRFSVHMSPRTRNSEALNSTP 204
Query: 627 KKIFVYESPYKLYVGNISWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSS 448
K VYESPYKLYVGN+SWA++P L+ HFS+FG+V S RVLHDR+ R +GF+SFSS
Sbjct: 205 VKNLVYESPYKLYVGNLSWAVQPHALRSHFSKFGTVASARVLHDRKAGKNRAYGFISFSS 264
Query: 447 VAERDAALSLNGTDFGGRSMIVK 379
AERD A SL+GT+F GR +I++
Sbjct: 265 AAERDKAASLDGTEFCGRRIIIR 287
>ref|NP_171616.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana] gi|16930401|gb|AAL31886.1|AF419554_1
At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|21554268|gb|AAM63343.1| ribonucleoprotein, putative
[Arabidopsis thaliana] gi|22135777|gb|AAM91045.1|
At1g01080/T25K16_7 [Arabidopsis thaliana]
gi|332189110|gb|AEE27231.1| RNA-binding (RRM/RBD/RNP
motifs) family protein [Arabidopsis thaliana]
Length = 293
Score = 254 bits (649), Expect = 1e-64
Identities = 126/194 (64%), Positives = 157/194 (80%), Gaps = 1/194 (0%)
Frame = -3
Query: 933 EPKNRARPCELYVCNLPRSCDDAELLEMFKPFGTVISVEVSRNPETGISRGCCYVTMGSI 754
EP + RPCELYVCN+PRS D A+LL+MF+PFGTVISVEVSRNP+TG SRG YVTMGSI
Sbjct: 100 EPVKKPRPCELYVCNIPRSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSI 159
Query: 753 NSAKNAIIALDGSDLGGREMRVRFSVDMNSRT-RDTETLISPPKKIFVYESPYKLYVGNI 577
NSAK AI +LDG+++GGREMRVR+SVDMN T R+ E L S PKKI +YES +K+YVGN+
Sbjct: 160 NSAKIAIASLDGTEVGGREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNL 219
Query: 576 SWAIKPQDLKDHFSQFGSVVSVRVLHDRRGRTTRVFGFLSFSSVAERDAALSLNGTDFGG 397
W +P L++HFS+FG++VS RVLHDR+ RVF FLSF+S ERDAALS NGT + G
Sbjct: 220 PWFTQPDGLRNHFSKFGTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEG 279
Query: 396 RSMIVKVGVDRTES 355
R +IV+ G++++ES
Sbjct: 280 RRIIVREGIEKSES 293