BLASTX nr result
ID: Zanthoxylum22_contig00013144
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00013144
(614 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 248 1e-63
ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citr... 248 1e-63
gb|KDO70243.1| hypothetical protein CISIN_1g002019mg [Citrus sin... 247 4e-63
gb|KDO70242.1| hypothetical protein CISIN_1g002019mg [Citrus sin... 247 4e-63
gb|KDO70241.1| hypothetical protein CISIN_1g002019mg [Citrus sin... 247 4e-63
gb|KDO70240.1| hypothetical protein CISIN_1g002019mg [Citrus sin... 247 4e-63
gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indi... 236 7e-60
ref|XP_010091652.1| DNA-directed RNA polymerase 1 [Morus notabil... 206 6e-51
ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 206 8e-51
ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prun... 206 1e-50
ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 204 3e-50
ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/m... 204 3e-50
ref|XP_010551348.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 204 4e-50
ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 203 7e-50
ref|XP_008351039.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 202 1e-49
ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 202 1e-49
ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 201 2e-49
ref|XP_010044351.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 200 4e-49
ref|XP_010044350.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 200 4e-49
gb|KCW86440.1| hypothetical protein EUGRSUZ_B03109 [Eucalyptus g... 200 4e-49
>ref|XP_006484275.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Citrus sinensis]
Length = 980
Score = 248 bits (634), Expect = 1e-63
Identities = 125/155 (80%), Positives = 137/155 (88%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++GVS++DSS+ L +QP K GMG+AKYYMLKRRQIK+ET AWEQ AKEYQ+L+ADMCE
Sbjct: 110 EKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCE 169
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
QKLAPNLPYVKSLFLGWFEPLRDAI+KDQ TA K KHMTYAPYF+ LPADMMAVI MHK
Sbjct: 170 QKLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHK 229
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEARCR 149
LVGLLMTNAGE VRVVQAACQIGEAIENEAR R
Sbjct: 230 LVGLLMTNAGE---VRVVQAACQIGEAIENEARIR 261
Score = 99.4 bits (246), Expect = 1e-18
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGKGRRYGVI 2
CRLIQLLMETAYIQPPVDQLGDSPPDI PAFVHTLKS TKEA KGRRYGVI
Sbjct: 337 CRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKGRRYGVI 387
>ref|XP_006437832.1| hypothetical protein CICLE_v10030633mg [Citrus clementina]
gi|557540028|gb|ESR51072.1| hypothetical protein
CICLE_v10030633mg [Citrus clementina]
Length = 980
Score = 248 bits (634), Expect = 1e-63
Identities = 125/155 (80%), Positives = 137/155 (88%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++GVS++DSS+ L +QP K GMG+AKYYMLKRRQIK+ET AWEQ AKEYQ+L+ADMCE
Sbjct: 110 EKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCE 169
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
QKLAPNLPYVKSLFLGWFEPLRDAI+KDQ TA K KHMTYAPYF+ LPADMMAVI MHK
Sbjct: 170 QKLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHK 229
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEARCR 149
LVGLLMTNAGE VRVVQAACQIGEAIENEAR R
Sbjct: 230 LVGLLMTNAGE---VRVVQAACQIGEAIENEARIR 261
Score = 99.4 bits (246), Expect = 1e-18
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGKGRRYGVI 2
CRLIQLLMETAYIQPPVDQLGDSPPDI PAFVHTLKS TKEA KGRRYGVI
Sbjct: 337 CRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKGRRYGVI 387
>gb|KDO70243.1| hypothetical protein CISIN_1g002019mg [Citrus sinensis]
Length = 492
Score = 247 bits (630), Expect = 4e-63
Identities = 124/153 (81%), Positives = 136/153 (88%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++GVS++DSS+ L +QP K GMG+AKYYMLKRRQIK+ET AWEQ AKEYQ+L+ADMCE
Sbjct: 110 EKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCE 169
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
QKLAPNLPYVKSLFLGWFEPLRDAI+KDQ TA K KHMTYAPYF+ LPADMMAVI MHK
Sbjct: 170 QKLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHK 229
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEAR 155
LVGLLMTNAGE VRVVQAACQIGEAIENEAR
Sbjct: 230 LVGLLMTNAGE---VRVVQAACQIGEAIENEAR 259
Score = 99.4 bits (246), Expect = 1e-18
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGKGRRYGVI 2
CRLIQLLMETAYIQPPVDQLGDSPPDI PAFVHTLKS TKEA KGRRYGVI
Sbjct: 337 CRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKGRRYGVI 387
>gb|KDO70242.1| hypothetical protein CISIN_1g002019mg [Citrus sinensis]
Length = 686
Score = 247 bits (630), Expect = 4e-63
Identities = 124/153 (81%), Positives = 136/153 (88%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++GVS++DSS+ L +QP K GMG+AKYYMLKRRQIK+ET AWEQ AKEYQ+L+ADMCE
Sbjct: 110 EKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCE 169
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
QKLAPNLPYVKSLFLGWFEPLRDAI+KDQ TA K KHMTYAPYF+ LPADMMAVI MHK
Sbjct: 170 QKLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHK 229
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEAR 155
LVGLLMTNAGE VRVVQAACQIGEAIENEAR
Sbjct: 230 LVGLLMTNAGE---VRVVQAACQIGEAIENEAR 259
Score = 99.4 bits (246), Expect = 1e-18
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGKGRRYGVI 2
CRLIQLLMETAYIQPPVDQLGDSPPDI PAFVHTLKS TKEA KGRRYGVI
Sbjct: 337 CRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKGRRYGVI 387
>gb|KDO70241.1| hypothetical protein CISIN_1g002019mg [Citrus sinensis]
Length = 858
Score = 247 bits (630), Expect = 4e-63
Identities = 124/153 (81%), Positives = 136/153 (88%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++GVS++DSS+ L +QP K GMG+AKYYMLKRRQIK+ET AWEQ AKEYQ+L+ADMCE
Sbjct: 110 EKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCE 169
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
QKLAPNLPYVKSLFLGWFEPLRDAI+KDQ TA K KHMTYAPYF+ LPADMMAVI MHK
Sbjct: 170 QKLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHK 229
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEAR 155
LVGLLMTNAGE VRVVQAACQIGEAIENEAR
Sbjct: 230 LVGLLMTNAGE---VRVVQAACQIGEAIENEAR 259
Score = 99.4 bits (246), Expect = 1e-18
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGKGRRYGVI 2
CRLIQLLMETAYIQPPVDQLGDSPPDI PAFVHTLKS TKEA KGRRYGVI
Sbjct: 337 CRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKGRRYGVI 387
>gb|KDO70240.1| hypothetical protein CISIN_1g002019mg [Citrus sinensis]
Length = 980
Score = 247 bits (630), Expect = 4e-63
Identities = 124/153 (81%), Positives = 136/153 (88%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++GVS++DSS+ L +QP K GMG+AKYYMLKRRQIK+ET AWEQ AKEYQ+L+ADMCE
Sbjct: 110 EKGVSILDSSSMLDKQPKKKGTGMGTAKYYMLKRRQIKIETEAWEQAAKEYQDLLADMCE 169
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
QKLAPNLPYVKSLFLGWFEPLRDAI+KDQ TA K KHMTYAPYF+ LPADMMAVI MHK
Sbjct: 170 QKLAPNLPYVKSLFLGWFEPLRDAIAKDQATAQDKWKHMTYAPYFNNLPADMMAVITMHK 229
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEAR 155
LVGLLMTNAGE VRVVQAACQIGEAIENEAR
Sbjct: 230 LVGLLMTNAGE---VRVVQAACQIGEAIENEAR 259
Score = 99.4 bits (246), Expect = 1e-18
Identities = 48/51 (94%), Positives = 48/51 (94%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGKGRRYGVI 2
CRLIQLLMETAYIQPPVDQLGDSPPDI PAFVHTLKS TKEA KGRRYGVI
Sbjct: 337 CRLIQLLMETAYIQPPVDQLGDSPPDIRPAFVHTLKSFTKEALKGRRYGVI 387
>gb|EAZ08263.1| hypothetical protein OsI_30516 [Oryza sativa Indica Group]
Length = 845
Score = 236 bits (602), Expect = 7e-60
Identities = 115/186 (61%), Positives = 141/186 (75%)
Frame = -2
Query: 589 SSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLP 410
S H + G+G KY ML+RRQI++ET AWEQ A+EY+EL+ADMC+QKLAPNLP
Sbjct: 99 SGRGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLP 158
Query: 409 YVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTN 230
YVKSLFLGWFEPLRD I +QE + ++A YF+ LPADMMAVI MHKL+GLLMT
Sbjct: 159 YVKSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTG 218
Query: 229 AGEVGCVRVVQAACQIGEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTL 50
+G+ G VRV+QAACQIGEAIE+E RLI+L++ETAYIQPP Q D PPDI PAF H +
Sbjct: 219 SGD-GSVRVIQAACQIGEAIEHEVGSRLIELMIETAYIQPPASQSADGPPDIRPAFTHEM 277
Query: 49 KSVTKE 32
++V +E
Sbjct: 278 RTVARE 283
>ref|XP_010091652.1| DNA-directed RNA polymerase 1 [Morus notabilis]
gi|587854893|gb|EXB44918.1| DNA-directed RNA polymerase
1 [Morus notabilis]
Length = 1023
Score = 206 bits (525), Expect = 6e-51
Identities = 97/153 (63%), Positives = 122/153 (79%)
Frame = -2
Query: 613 KQGVSMIDSSTALHRQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCE 434
++ +S +++ + P + + GMG+AKY L++RQIK+ET AWEQ AKEY+EL+ DMCE
Sbjct: 124 EEEISRENNAETYSKAPKRTVAGMGTAKYQKLRKRQIKIETEAWEQAAKEYRELMVDMCE 183
Query: 433 QKLAPNLPYVKSLFLGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHK 254
+KLAPNLPYVKSL LGWFEPLRDAI+ DQE TYAPYFD LPAD+MAVIAMHK
Sbjct: 184 RKLAPNLPYVKSLLLGWFEPLRDAIAADQEACREMKNKPTYAPYFDHLPADVMAVIAMHK 243
Query: 253 LVGLLMTNAGEVGCVRVVQAACQIGEAIENEAR 155
L+GL+MTN+G VGC+RVVQAA QIGEA+E+E +
Sbjct: 244 LMGLMMTNSGIVGCIRVVQAASQIGEALEHEVK 276
Score = 85.1 bits (209), Expect = 3e-14
Identities = 42/52 (80%), Positives = 45/52 (86%), Gaps = 1/52 (1%)
Frame = -2
Query: 154 CRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGVI 2
CRLIQLLMETAYIQPPVDQL DSPPDI PAFVH+LK+V K+ K RRYGVI
Sbjct: 356 CRLIQLLMETAYIQPPVDQLDDSPPDIRPAFVHSLKTVVKDTRKTSRRYGVI 407
>ref|XP_008243783.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Prunus
mume]
Length = 1006
Score = 206 bits (524), Expect = 8e-51
Identities = 96/139 (69%), Positives = 116/139 (83%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+QP +++ GMG KY +L++RQIK+ET AW++ AKEYQEL+ADMCEQKLAPNLPY+KSLF
Sbjct: 138 KQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLRDAI+ DQ++ + ++APYFD LPAD MAVI MHKL+GLLMTN G VG
Sbjct: 198 LGWFEPLRDAIAADQDSCKQTNSRQSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGVGS 257
Query: 211 VRVVQAACQIGEAIENEAR 155
VRVVQAAC IGEAIE+E R
Sbjct: 258 VRVVQAACAIGEAIEHEVR 276
Score = 86.3 bits (212), Expect = 1e-14
Identities = 41/61 (67%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ+GD PPDI PAFVH LK++TK+ K RRYGV
Sbjct: 353 GQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITKDTQKTSRRYGV 412
Query: 4 I 2
I
Sbjct: 413 I 413
>ref|XP_007225383.1| hypothetical protein PRUPE_ppa000780mg [Prunus persica]
gi|462422319|gb|EMJ26582.1| hypothetical protein
PRUPE_ppa000780mg [Prunus persica]
Length = 1006
Score = 206 bits (523), Expect = 1e-50
Identities = 95/139 (68%), Positives = 116/139 (83%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+QP +++ GMG KY +L++RQIK+ET AW++ AKEYQEL+ADMCEQKLAPNLPY+KSLF
Sbjct: 138 KQPKRVVVGMGVGKYNLLRKRQIKLETEAWQEAAKEYQELLADMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLRDAI+ DQ++ + ++APYFD LPAD MAVI MHKL+GLLMTN G +G
Sbjct: 198 LGWFEPLRDAIAADQDSCKQPNSRQSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGIGS 257
Query: 211 VRVVQAACQIGEAIENEAR 155
VRVVQAAC IGEAIE+E R
Sbjct: 258 VRVVQAACAIGEAIEHEVR 276
Score = 85.1 bits (209), Expect = 3e-14
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ+GD PPDI PAFVH LK++T++ K RRYGV
Sbjct: 353 GQEAHVKVGCRLIQLLMDTAYIQPPVDQIGDGPPDIRPAFVHNLKTITRDTQKTSRRYGV 412
Query: 4 I 2
I
Sbjct: 413 I 413
>ref|XP_009355625.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus
x bretschneideri]
Length = 1007
Score = 204 bits (519), Expect = 3e-50
Identities = 100/165 (60%), Positives = 125/165 (75%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+QP K++ G+G KY +L++RQIK+ET AWE+ A EYQEL+ DMCEQKLAPNLPY+KSLF
Sbjct: 138 KQPKKVVAGIGVGKYNLLRKRQIKLETEAWEEAANEYQELLVDMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLR+AI++DQE + +++APY D LPAD MAVI MHKL+GLLMTN G VG
Sbjct: 198 LGWFEPLRNAIAEDQEACRQPNNRVSHAPYIDHLPADKMAVITMHKLMGLLMTNNGGVGS 257
Query: 211 VRVVQAACQIGEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPD 77
VRVVQAAC IGEAIENE R+ + L +T + P D+ + D
Sbjct: 258 VRVVQAACAIGEAIENEV--RIHRFLEKTKKKKNPTDKKPEDESD 300
Score = 80.9 bits (198), Expect = 5e-13
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ GD P DI PAFVH LK++TK+ K RRYGV
Sbjct: 354 GQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGV 413
Query: 4 I 2
I
Sbjct: 414 I 414
>ref|XP_002514571.1| DNA-directed RNA polymerase 2, chloroplast/mitochondrial precursor,
putative [Ricinus communis] gi|223546175|gb|EEF47677.1|
DNA-directed RNA polymerase 2, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
Length = 997
Score = 204 bits (519), Expect = 3e-50
Identities = 98/139 (70%), Positives = 115/139 (82%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+Q K I GMG KY +LK+RQIKMET AWE+ A+EYQEL+ DMCEQKLAPNLPY+KSLF
Sbjct: 135 QQRKKTIAGMGIGKYTILKKRQIKMETEAWEEAAREYQELLTDMCEQKLAPNLPYIKSLF 194
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLRDAI+K+QE + K+ +++ PYFD LPADMMAVI MHKL+GLLMT G G
Sbjct: 195 LGWFEPLRDAIAKEQELSREKNNKLSHGPYFDALPADMMAVITMHKLMGLLMTTNGGNGS 254
Query: 211 VRVVQAACQIGEAIENEAR 155
VRVVQAAC +GEAIE+EAR
Sbjct: 255 VRVVQAACAVGEAIEHEAR 273
Score = 80.5 bits (197), Expect = 7e-13
Identities = 40/61 (65%), Positives = 48/61 (78%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + + CRLIQLL+ETAYIQPPV+QLGD PDI PAF+HTLK+V K+ K RRYGV
Sbjct: 344 GQEAQVKVGCRLIQLLIETAYIQPPVNQLGDGLPDIRPAFMHTLKNVMKDTQKTSRRYGV 403
Query: 4 I 2
I
Sbjct: 404 I 404
>ref|XP_010551348.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Tarenaya
hassleriana]
Length = 992
Score = 204 bits (518), Expect = 4e-50
Identities = 96/138 (69%), Positives = 117/138 (84%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+QP +M+ G+G+AKYYMLKRRQIKMET AWE+ AKEYQEL+ DMC+QKLAP+LPYVK+LF
Sbjct: 131 QQPKRMVGGLGAAKYYMLKRRQIKMETEAWEEAAKEYQELLEDMCQQKLAPSLPYVKALF 190
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLRDAI + ++ K +APY ++LPADMMAVI MHK++GLLMTN+ VG
Sbjct: 191 LGWFEPLRDAIQAELDSFKGKKMKAPHAPYMEQLPADMMAVITMHKMMGLLMTNSKGVGN 250
Query: 211 VRVVQAACQIGEAIENEA 158
VRVVQAACQIGEA+E+EA
Sbjct: 251 VRVVQAACQIGEAVEHEA 268
Score = 85.5 bits (210), Expect = 2e-14
Identities = 41/61 (67%), Positives = 50/61 (81%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + + RLIQLLME AYIQPPVDQ+GD PPDI PAFVH+LK++TKE+ K G+RYGV
Sbjct: 339 GQEAQVKVGSRLIQLLMENAYIQPPVDQIGDGPPDIRPAFVHSLKTITKESTKTGKRYGV 398
Query: 4 I 2
I
Sbjct: 399 I 399
>ref|XP_009356470.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial-like [Pyrus
x bretschneideri]
Length = 1007
Score = 203 bits (516), Expect = 7e-50
Identities = 96/139 (69%), Positives = 114/139 (82%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+Q K++ GMG KY +L++RQIK+ET AWE+ A EYQEL+ DMCEQKLAPNLPY+KSLF
Sbjct: 138 KQTKKVVGGMGVGKYNLLRKRQIKLETEAWEEAANEYQELLVDMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLR+AI++DQE + +++APYFD LPAD MAVI MHKL+GLLMTN G VG
Sbjct: 198 LGWFEPLRNAIAEDQEACRQPNSRVSHAPYFDHLPADKMAVITMHKLMGLLMTNNGGVGS 257
Query: 211 VRVVQAACQIGEAIENEAR 155
VRVVQAAC IGEAIENE R
Sbjct: 258 VRVVQAACAIGEAIENEVR 276
Score = 77.8 bits (190), Expect = 4e-12
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ GD DI PAFVH LK++TK+ K RRYGV
Sbjct: 354 GQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDGSLDIRPAFVHVLKTITKDTQKTSRRYGV 413
Query: 4 I 2
I
Sbjct: 414 I 414
>ref|XP_008351039.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 1,
mitochondrial-like [Malus domestica]
Length = 487
Score = 202 bits (514), Expect = 1e-49
Identities = 96/139 (69%), Positives = 113/139 (81%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+Q K++ GMG KY +L++RQIK+ET AWE+ A EYQEL+ DMCEQKLAPNLPY+KSLF
Sbjct: 138 KQTKKVVGGMGVGKYNLLRKRQIKLETEAWEEAANEYQELLVDMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLR+AI++DQE + ++APYFD LPAD MAVI MHKL+GLLMTN G VG
Sbjct: 198 LGWFEPLRNAIAEDQEACRQPNSRASHAPYFDHLPADKMAVITMHKLMGLLMTNNGGVGS 257
Query: 211 VRVVQAACQIGEAIENEAR 155
VRVVQAAC IGEAIENE R
Sbjct: 258 VRVVQAACAIGEAIENEVR 276
Score = 77.4 bits (189), Expect = 6e-12
Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ GD+ DI PAFVH LK+VTK+ K RRYG+
Sbjct: 354 GQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDASLDIRPAFVHVLKTVTKDTQKTSRRYGM 413
Query: 4 I 2
I
Sbjct: 414 I 414
>ref|XP_008389363.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Malus
domestica]
Length = 1007
Score = 202 bits (514), Expect = 1e-49
Identities = 96/139 (69%), Positives = 113/139 (81%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+Q K++ GMG KY +L++RQIK+ET AWE+ A EYQEL+ DMCEQKLAPNLPY+KSLF
Sbjct: 138 KQTKKVVGGMGVGKYNLLRKRQIKLETEAWEEAANEYQELLVDMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLR+AI++DQE + ++APYFD LPAD MAVI MHKL+GLLMTN G VG
Sbjct: 198 LGWFEPLRNAIAEDQEACRQPNSRASHAPYFDHLPADKMAVITMHKLMGLLMTNNGGVGS 257
Query: 211 VRVVQAACQIGEAIENEAR 155
VRVVQAAC IGEAIENE R
Sbjct: 258 VRVVQAACAIGEAIENEVR 276
Score = 77.4 bits (189), Expect = 6e-12
Identities = 39/61 (63%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ GD+ DI PAFVH LK+VTK+ K RRYG+
Sbjct: 354 GQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDASLDIRPAFVHVLKTVTKDTQKTSRRYGM 413
Query: 4 I 2
I
Sbjct: 414 I 414
>ref|XP_008339743.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Malus domestica]
Length = 1007
Score = 201 bits (512), Expect = 2e-49
Identities = 100/165 (60%), Positives = 123/165 (74%)
Frame = -2
Query: 571 RQPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLF 392
+QP K++ G+G KY L++RQIK+ET AWE+ A EYQEL+ DMCEQKLAPNLPY+KSLF
Sbjct: 138 KQPKKVVAGIGVGKYNXLRKRQIKLETEAWEEAANEYQELLVDMCEQKLAPNLPYIKSLF 197
Query: 391 LGWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGC 212
LGWFEPLR+AI++DQE +++APY D LPAD MAVI MHKL+GLLMTN G VG
Sbjct: 198 LGWFEPLRNAIAEDQEACRQPHNRVSHAPYIDLLPADKMAVITMHKLMGLLMTNNGGVGS 257
Query: 211 VRVVQAACQIGEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPD 77
VRVVQAAC IGEAIENE R+ + L +T + P D+ + D
Sbjct: 258 VRVVQAACAIGEAIENEV--RIHRFLDKTKKKKNPTDKKPEDESD 300
Score = 80.9 bits (198), Expect = 5e-13
Identities = 40/61 (65%), Positives = 46/61 (75%), Gaps = 1/61 (1%)
Frame = -2
Query: 181 GEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVTKEAGK-GRRYGV 5
G+ + CRLIQLLM+TAYIQPPVDQ GD P DI PAFVH LK++TK+ K RRYGV
Sbjct: 354 GQEAHVKVGCRLIQLLMDTAYIQPPVDQSGDDPLDIRPAFVHVLKTITKDTQKTSRRYGV 413
Query: 4 I 2
I
Sbjct: 414 I 414
>ref|XP_010044351.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X2
[Eucalyptus grandis]
Length = 973
Score = 200 bits (509), Expect = 4e-49
Identities = 97/137 (70%), Positives = 112/137 (81%)
Frame = -2
Query: 568 QPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLFL 389
Q K I GMG +KY+MLK+RQ+KMET AWE+ A+EYQEL+ADMCEQKLAPNLPYVKSLFL
Sbjct: 131 QQQKRIAGMGMSKYHMLKKRQVKMETEAWEEAAREYQELLADMCEQKLAPNLPYVKSLFL 190
Query: 388 GWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGCV 209
GWFEPLRDAI +QE K ++AP+ D+LPADMMAVI MHKL+GLL++ G G
Sbjct: 191 GWFEPLRDAIVAEQELCRKKKSKPSHAPFIDQLPADMMAVITMHKLMGLLLSTNGGNGSC 250
Query: 208 RVVQAACQIGEAIENEA 158
RVVQAACQIGEAIENEA
Sbjct: 251 RVVQAACQIGEAIENEA 267
Score = 88.6 bits (218), Expect = 2e-15
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -2
Query: 217 GCVRVVQAACQIGEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVT 38
G V+ + G+ + CRLIQLLMETAYIQPP+DQLGD PPD+ PAF H LK++T
Sbjct: 324 GIVKAQDESRPWGQENHVKIGCRLIQLLMETAYIQPPIDQLGDGPPDVRPAFTHVLKTLT 383
Query: 37 KEAGKG-RRYGVI 2
K+A KG RRYGVI
Sbjct: 384 KDAQKGSRRYGVI 396
>ref|XP_010044350.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial isoform X1
[Eucalyptus grandis]
Length = 989
Score = 200 bits (509), Expect = 4e-49
Identities = 97/137 (70%), Positives = 112/137 (81%)
Frame = -2
Query: 568 QPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLFL 389
Q K I GMG +KY+MLK+RQ+KMET AWE+ A+EYQEL+ADMCEQKLAPNLPYVKSLFL
Sbjct: 131 QQQKRIAGMGMSKYHMLKKRQVKMETEAWEEAAREYQELLADMCEQKLAPNLPYVKSLFL 190
Query: 388 GWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGCV 209
GWFEPLRDAI +QE K ++AP+ D+LPADMMAVI MHKL+GLL++ G G
Sbjct: 191 GWFEPLRDAIVAEQELCRKKKSKPSHAPFIDQLPADMMAVITMHKLMGLLLSTNGGNGSC 250
Query: 208 RVVQAACQIGEAIENEA 158
RVVQAACQIGEAIENEA
Sbjct: 251 RVVQAACQIGEAIENEA 267
Score = 88.6 bits (218), Expect = 2e-15
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -2
Query: 217 GCVRVVQAACQIGEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVT 38
G V+ + G+ + CRLIQLLMETAYIQPP+DQLGD PPD+ PAF H LK++T
Sbjct: 324 GIVKAQDESRPWGQENHVKIGCRLIQLLMETAYIQPPIDQLGDGPPDVRPAFTHVLKTLT 383
Query: 37 KEAGKG-RRYGVI 2
K+A KG RRYGVI
Sbjct: 384 KDAQKGSRRYGVI 396
>gb|KCW86440.1| hypothetical protein EUGRSUZ_B03109 [Eucalyptus grandis]
Length = 931
Score = 200 bits (509), Expect = 4e-49
Identities = 97/137 (70%), Positives = 112/137 (81%)
Frame = -2
Query: 568 QPNKMIFGMGSAKYYMLKRRQIKMETAAWEQTAKEYQELVADMCEQKLAPNLPYVKSLFL 389
Q K I GMG +KY+MLK+RQ+KMET AWE+ A+EYQEL+ADMCEQKLAPNLPYVKSLFL
Sbjct: 73 QQQKRIAGMGMSKYHMLKKRQVKMETEAWEEAAREYQELLADMCEQKLAPNLPYVKSLFL 132
Query: 388 GWFEPLRDAISKDQETANAKSKHMTYAPYFDKLPADMMAVIAMHKLVGLLMTNAGEVGCV 209
GWFEPLRDAI +QE K ++AP+ D+LPADMMAVI MHKL+GLL++ G G
Sbjct: 133 GWFEPLRDAIVAEQELCRKKKSKPSHAPFIDQLPADMMAVITMHKLMGLLLSTNGGNGSC 192
Query: 208 RVVQAACQIGEAIENEA 158
RVVQAACQIGEAIENEA
Sbjct: 193 RVVQAACQIGEAIENEA 209
Score = 88.6 bits (218), Expect = 2e-15
Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Frame = -2
Query: 217 GCVRVVQAACQIGEAIENEARCRLIQLLMETAYIQPPVDQLGDSPPDIHPAFVHTLKSVT 38
G V+ + G+ + CRLIQLLMETAYIQPP+DQLGD PPD+ PAF H LK++T
Sbjct: 266 GIVKAQDESRPWGQENHVKIGCRLIQLLMETAYIQPPIDQLGDGPPDVRPAFTHVLKTLT 325
Query: 37 KEAGKG-RRYGVI 2
K+A KG RRYGVI
Sbjct: 326 KDAQKGSRRYGVI 338