BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00009350
         (1387 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   323   3e-85
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   321   1e-84
gb|KDO41300.1| hypothetical protein CISIN_1g0102242mg, partial [...   274   1e-70
ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts...   261   1e-66
ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts...   261   1e-66
ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts...   261   1e-66
ref|XP_012066696.1| PREDICTED: regulator of nonsense transcripts...   247   2e-62
ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts...   247   2e-62
ref|XP_002526435.1| conserved hypothetical protein [Ricinus comm...   241   1e-60
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   238   7e-60
ref|XP_011047886.1| PREDICTED: regulator of nonsense transcripts...   238   9e-60
ref|XP_011047883.1| PREDICTED: regulator of nonsense transcripts...   237   2e-59
ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts...   237   2e-59
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   236   4e-59
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ...   236   5e-59
ref|XP_011047887.1| PREDICTED: regulator of nonsense transcripts...   235   8e-59
ref|XP_011047885.1| PREDICTED: regulator of nonsense transcripts...   234   1e-58
ref|XP_011028363.1| PREDICTED: regulator of nonsense transcripts...   234   1e-58
ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocar...   229   4e-57
ref|XP_012436519.1| PREDICTED: regulator of nonsense transcripts...   215   8e-53

>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  323 bits (827), Expect = 3e-85
 Identities = 174/302 (57%), Positives = 194/302 (64%), Gaps = 3/302 (0%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAKNSSG DKSTY LVPK+DDQ FDKP                    N D     
Sbjct: 213  YVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSATGSEVVLEESGVPANSDGGKKK 272

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHRS 361
                   EREI               K I+ SPA K+NQRRE++GRII+GILLNK+A ++
Sbjct: 273  VLLLKGKEREISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGILLNKDARQN 332

Query: 362  QAE---QQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLHSKKQERRTRNKDR 532
            QA     + Q S+LEKDKRPPRP HVQLV+KDTNGV D K IVNDLHS+KQERRTRNKDR
Sbjct: 333  QASGLHSEQQISNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDLHSEKQERRTRNKDR 392

Query: 533  PDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEVKTVRC 712
            PDR  WTLRR                          EG+ GDGK D+SN+RSGEVK V  
Sbjct: 393  PDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGG 452

Query: 713  GHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWVQKSSP 892
            G SSHSS+DNGSHRHI RRGP H K DGS V+SEGKPL+ G +SGYGSHEKQVWVQKSS 
Sbjct: 453  GRSSHSSVDNGSHRHIGRRGPTHVKDDGSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSS 512

Query: 893  GS 898
            GS
Sbjct: 513  GS 514


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  321 bits (822), Expect = 1e-84
 Identities = 173/302 (57%), Positives = 193/302 (63%), Gaps = 3/302 (0%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAKNSSG DKSTY LVPK+DDQ FDKP                    N D     
Sbjct: 213  YVLRDTAKNSSGKDKSTYILVPKRDDQDFDKPVSSSSATGSEVVLEESGVPANSDGGKKK 272

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHRS 361
                   EREI               KNI+ SPA K+NQRRE++GRII+GILLNK+A ++
Sbjct: 273  VLLLKGKEREISQVSGSVSHQQSASVKNIISSPALKQNQRRENSGRIIRGILLNKDARQN 332

Query: 362  QAE---QQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLHSKKQERRTRNKDR 532
            QA     + Q S+LEKDKRPPRP HV LV+KDTNGV D K IVNDLHS+KQERRTRNKDR
Sbjct: 333  QASGLHSEQQISNLEKDKRPPRPSHVHLVMKDTNGVSDDKVIVNDLHSEKQERRTRNKDR 392

Query: 533  PDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEVKTVRC 712
            PDR  WTLRR                          EG+ GDGK D+SN+RSGEVK V  
Sbjct: 393  PDRAAWTLRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGG 452

Query: 713  GHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWVQKSSP 892
            G SSHSS+DNGSHRHI RRGP H K D S V+SEGKPL+ G +SGYGSHEKQVWVQKSS 
Sbjct: 453  GRSSHSSVDNGSHRHIGRRGPTHVKDDSSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSS 512

Query: 893  GS 898
            GS
Sbjct: 513  GS 514


>gb|KDO41300.1| hypothetical protein CISIN_1g0102242mg, partial [Citrus sinensis]
           gi|641821657|gb|KDO41301.1| hypothetical protein
           CISIN_1g0102242mg, partial [Citrus sinensis]
          Length = 253

 Score =  274 bits (701), Expect = 1e-70
 Identities = 144/235 (61%), Positives = 163/235 (69%), Gaps = 3/235 (1%)
 Frame = +2

Query: 203 EREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHRSQAE---Q 373
           EREI               K I+ SPA K+NQRRE++GRII+GILLNK+A ++QA     
Sbjct: 19  EREISQVSGSVSHQQSASVKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLHS 78

Query: 374 QMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLHSKKQERRTRNKDRPDRGVWT 553
           + Q S+LEKDKRPPRP HVQLV+KDTNGV D K IVNDLHS+KQERRTRNKDRPDR  WT
Sbjct: 79  EQQISNLEKDKRPPRPSHVQLVMKDTNGVSDDKVIVNDLHSEKQERRTRNKDRPDRAAWT 138

Query: 554 LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEVKTVRCGHSSHSS 733
           LRR                          EG+ GDGK D+SN+RSGEVK V  G SSHSS
Sbjct: 139 LRRSDGSYQSDESLSSSASQLSLSAVDSSEGNLGDGKFDLSNMRSGEVKAVGGGRSSHSS 198

Query: 734 LDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWVQKSSPGS 898
           +DNGSHRHI RRGP H K DGS V+SEGKPL+ G +SGYGSHEKQVWVQKSS GS
Sbjct: 199 VDNGSHRHIGRRGPTHVKDDGSPVMSEGKPLRRGGASGYGSHEKQVWVQKSSSGS 253


>ref|XP_010657969.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X3 [Vitis
            vinifera]
          Length = 514

 Score =  261 bits (666), Expect = 1e-66
 Identities = 155/310 (50%), Positives = 185/310 (59%), Gaps = 12/310 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRDTAK++S  DKST+ LVPK+DDQ   DK                       DA   
Sbjct: 213  YVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKK 272

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHR 358
                    EREI               KNILG+ APK+NQRRE +GRII+ ILLNK+A +
Sbjct: 273  KVLLLKGKEREISHNVTSPV-------KNILGANAPKQNQRREGSGRIIRSILLNKDARQ 325

Query: 359  SQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQERR 514
            SQ+     EQQ Q S+LEK+KRPPRPPH+QL  K+TNG  D K + ND+H   S+KQ++R
Sbjct: 326  SQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKR 385

Query: 515  TRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            TRNKDRPDRGVWT LRR                          EGS G+ + D+SN RSG
Sbjct: 386  TRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSG 443

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHS--KVDGSSVISEGKPLKSGNSSGYGSHEK 865
            EVK +  G   HS+LDNGSH+H  RRGP HS    DGSS++SEGK  K G++ GYGSHEK
Sbjct: 444  EVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEK 503

Query: 866  QVWVQKSSPG 895
            QVWVQKSS G
Sbjct: 504  QVWVQKSSSG 513


>ref|XP_010657968.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X2 [Vitis
            vinifera]
          Length = 515

 Score =  261 bits (666), Expect = 1e-66
 Identities = 155/310 (50%), Positives = 185/310 (59%), Gaps = 12/310 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRDTAK++S  DKST+ LVPK+DDQ   DK                       DA   
Sbjct: 213  YVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKK 272

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHR 358
                    EREI               KNILG+ APK+NQRRE +GRII+ ILLNK+A +
Sbjct: 273  KVLLLKGKEREISHQNVTSPV------KNILGANAPKQNQRREGSGRIIRSILLNKDARQ 326

Query: 359  SQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQERR 514
            SQ+     EQQ Q S+LEK+KRPPRPPH+QL  K+TNG  D K + ND+H   S+KQ++R
Sbjct: 327  SQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKR 386

Query: 515  TRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            TRNKDRPDRGVWT LRR                          EGS G+ + D+SN RSG
Sbjct: 387  TRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSG 444

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHS--KVDGSSVISEGKPLKSGNSSGYGSHEK 865
            EVK +  G   HS+LDNGSH+H  RRGP HS    DGSS++SEGK  K G++ GYGSHEK
Sbjct: 445  EVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEK 504

Query: 866  QVWVQKSSPG 895
            QVWVQKSS G
Sbjct: 505  QVWVQKSSSG 514


>ref|XP_010657967.1| PREDICTED: regulator of nonsense transcripts UPF3 isoform X1 [Vitis
            vinifera] gi|297739512|emb|CBI29694.3| unnamed protein
            product [Vitis vinifera]
          Length = 519

 Score =  261 bits (666), Expect = 1e-66
 Identities = 155/310 (50%), Positives = 185/310 (59%), Gaps = 12/310 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRDTAK++S  DKST+ LVPK+DDQ   DK                       DA   
Sbjct: 213  YVLRDTAKSTSAKDKSTFILVPKRDDQLLSDKSVNLAAGGGAEALEEESGVSGAVDAGKK 272

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHR 358
                    EREI               KNILG+ APK+NQRRE +GRII+ ILLNK+A +
Sbjct: 273  KVLLLKGKEREISHHLLQQNVTSPV--KNILGANAPKQNQRREGSGRIIRSILLNKDARQ 330

Query: 359  SQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQERR 514
            SQ+     EQQ Q S+LEK+KRPPRPPH+QL  K+TNG  D K + ND+H   S+KQ++R
Sbjct: 331  SQSSMFQTEQQSQASNLEKEKRPPRPPHIQLASKETNGAQDDKVVGNDVHSFVSEKQDKR 390

Query: 515  TRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            TRNKDRPDRGVWT LRR                          EGS G+ + D+SN RSG
Sbjct: 391  TRNKDRPDRGVWTPLRR--SDGSHASDESLSSSASQPTSSDFPEGSHGEMRSDMSNARSG 448

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHS--KVDGSSVISEGKPLKSGNSSGYGSHEK 865
            EVK +  G   HS+LDNGSH+H  RRGP HS    DGSS++SEGK  K G++ GYGSHEK
Sbjct: 449  EVKALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHEK 508

Query: 866  QVWVQKSSPG 895
            QVWVQKSS G
Sbjct: 509  QVWVQKSSSG 518


>ref|XP_012066696.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Jatropha curcas]
          Length = 509

 Score =  247 bits (631), Expect = 2e-62
 Identities = 152/309 (49%), Positives = 180/309 (58%), Gaps = 10/309 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRDTAK++SG DKSTY LVPK+DDQ   DK                       DA   
Sbjct: 211  YVLRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTASGAEVLEDESGASGITDAGKK 270

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHR 358
                    E+EI               KN++ S A K+NQRRE++GRII+ ILLNKE+ +
Sbjct: 271  KILLLKGKEKEISDNAASFD-------KNVISS-AVKQNQRREASGRIIRSILLNKESRQ 322

Query: 359  SQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLHS---KKQERR 514
            +Q+     E QMQ S+ EK+KRPPRPPHVQLV+ +TNG  D K ++NDLH    +KQE+R
Sbjct: 323  NQSSGIQSEHQMQTSNSEKEKRPPRPPHVQLVL-NTNGALDDKVVINDLHGFSGEKQEKR 381

Query: 515  TRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            TRNKDRPDR VWT LRR                          +G+ GD K+D SN RSG
Sbjct: 382  TRNKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSGVDSSQGNLGDLKVDPSNSRSG 441

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQV 871
            EVKT+  G  SHSSLDNGSH+H  RRGP H   D      EGK  K G +SGYGSHEKQV
Sbjct: 442  EVKTLT-GRGSHSSLDNGSHKHFGRRGPSHPVRDADGSSGEGKASKRGGASGYGSHEKQV 500

Query: 872  WVQKSSPGS 898
            WVQKSS GS
Sbjct: 501  WVQKSSSGS 509


>ref|XP_012066695.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Jatropha curcas] gi|643736043|gb|KDP42459.1|
            hypothetical protein JCGZ_00256 [Jatropha curcas]
          Length = 510

 Score =  247 bits (631), Expect = 2e-62
 Identities = 152/309 (49%), Positives = 180/309 (58%), Gaps = 10/309 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRDTAK++SG DKSTY LVPK+DDQ   DK                       DA   
Sbjct: 211  YVLRDTAKSTSGKDKSTYILVPKRDDQQLSDKAVTLGTASGAEVLEDESGASGITDAGKK 270

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHR 358
                    E+EI               KN++ S A K+NQRRE++GRII+ ILLNKE+ +
Sbjct: 271  KILLLKGKEKEISDQNAASFD------KNVISS-AVKQNQRREASGRIIRSILLNKESRQ 323

Query: 359  SQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLHS---KKQERR 514
            +Q+     E QMQ S+ EK+KRPPRPPHVQLV+ +TNG  D K ++NDLH    +KQE+R
Sbjct: 324  NQSSGIQSEHQMQTSNSEKEKRPPRPPHVQLVL-NTNGALDDKVVINDLHGFSGEKQEKR 382

Query: 515  TRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            TRNKDRPDR VWT LRR                          +G+ GD K+D SN RSG
Sbjct: 383  TRNKDRPDRVVWTPLRRSDGSYASDESLSLSASQSTQSGVDSSQGNLGDLKVDPSNSRSG 442

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQV 871
            EVKT+  G  SHSSLDNGSH+H  RRGP H   D      EGK  K G +SGYGSHEKQV
Sbjct: 443  EVKTLT-GRGSHSSLDNGSHKHFGRRGPSHPVRDADGSSGEGKASKRGGASGYGSHEKQV 501

Query: 872  WVQKSSPGS 898
            WVQKSS GS
Sbjct: 502  WVQKSSSGS 510


>ref|XP_002526435.1| conserved hypothetical protein [Ricinus communis]
            gi|223534215|gb|EEF35930.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 472

 Score =  241 bits (614), Expect = 1e-60
 Identities = 148/310 (47%), Positives = 179/310 (57%), Gaps = 11/310 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRD+AK++SG DKSTY LVPK+DDQ F DK                      C     
Sbjct: 177  YVLRDSAKSTSGKDKSTYLLVPKRDDQQFSDKSTPFASASGTEVLEDESELYHLCLLI-- 234

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHR 358
                       +               KN+  S A K++QRRES+GRII+ ILLNK++ +
Sbjct: 235  -----------VQLSGGMSKQNAASFDKNVTSS-AIKQSQRRESSGRIIRSILLNKDSRQ 282

Query: 359  SQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLHS---KKQERR 514
            +Q+     EQQ+Q+S+LEK+KR PRP HVQLV+KD NG  D K + NDLH    +KQE+R
Sbjct: 283  NQSSGFQSEQQIQSSNLEKEKRLPRPAHVQLVLKDVNGSSDDKFVGNDLHGFSGEKQEKR 342

Query: 515  TRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            TRNKDRPDR VWT LRR                          +G+ GD K+D SN RSG
Sbjct: 343  TRNKDRPDRVVWTPLRRSDGSYASDESLSSSASQSTHTGQDSSQGNLGDIKVDSSNSRSG 402

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLK-SGNSSGYGSHEKQ 868
            +VKT+  G SSHSSLDNGSH+H  RRGP H+  D      EGKP K  G +SGYGSHEKQ
Sbjct: 403  DVKTLGSGRSSHSSLDNGSHKHFGRRGPSHTVRDADGSSLEGKPSKRGGGASGYGSHEKQ 462

Query: 869  VWVQKSSPGS 898
            VWVQKSS GS
Sbjct: 463  VWVQKSSSGS 472


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
            gi|550312328|gb|ERP48419.1| hypothetical protein
            POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  238 bits (608), Expect = 7e-60
 Identities = 144/307 (46%), Positives = 169/307 (55%), Gaps = 8/307 (2%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDT K +SG +KS Y+ VPK DD+   K                             
Sbjct: 212  YVLRDTVKGTSGKEKSIYAQVPKLDDRQLSKAVTLGSGSGTEVSEEETAVSGITGTGKKK 271

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHRS 361
                   E+EI               +NI+ S A K +QR ES+GR+IK ILLNK++ R 
Sbjct: 272  ILLLKGKEKEISLQQSISPSD-----RNIISSTALK-SQRHESSGRVIKSILLNKDSRRI 325

Query: 362  QA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQERRT 517
            Q+     E QMQ S+LEKDKRPPRPPH  LV+KD NG PD K + NDLH   ++KQERRT
Sbjct: 326  QSSGVQSEPQMQTSNLEKDKRPPRPPHA-LVLKDANGTPDDKVVGNDLHGFPNEKQERRT 384

Query: 518  RNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEV 697
            RNKDRPDR VWTLRR                          + + GD K D  N+RSGEV
Sbjct: 385  RNKDRPDRVVWTLRRSEGSYASDESLSSSAYLSTQSGFDSSQVNHGDVKADTLNLRSGEV 444

Query: 698  KTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWV 877
            K +  G S+HSSLDNGSH+H  RRGP H   D      EGK LK G +SGYGSHEKQVWV
Sbjct: 445  KALGSGRSNHSSLDNGSHKHSGRRGPPHPVRDADGSTVEGKSLKRGGASGYGSHEKQVWV 504

Query: 878  QKSSPGS 898
            QKSS GS
Sbjct: 505  QKSSSGS 511


>ref|XP_011047886.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X3
            [Populus euphratica]
          Length = 511

 Score =  238 bits (607), Expect = 9e-60
 Identities = 142/307 (46%), Positives = 171/307 (55%), Gaps = 8/307 (2%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK +SG +KS Y+ VPK DD+   K                       D     
Sbjct: 212  YVLRDTAKGTSGKEKSIYAQVPKLDDRRLSKAVTLGSGSGTEVSEEETAVSGITDTGKKK 271

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHRS 361
                   E+EI               +NI+ S A K +QR ES+GR+IK ILL+K++ R 
Sbjct: 272  ILLLKGKEKEISLQQSISTSD-----RNIISSTALK-SQRHESSGRVIKSILLHKDSRRI 325

Query: 362  QA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQERRT 517
            Q+     E QMQ S+LEKDKRPPRPPH  LV+KD NG PD + + NDLH   ++KQERRT
Sbjct: 326  QSSGVQSEPQMQTSNLEKDKRPPRPPHT-LVLKDANGTPDDQAVANDLHGFPNEKQERRT 384

Query: 518  RNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEV 697
            RNKDRPDR VWTLRR                          + + GD K+D  N+RSGEV
Sbjct: 385  RNKDRPDRVVWTLRRSEGSCASDESLSSSASLSTQSGFDSSQVNHGDVKVDTLNLRSGEV 444

Query: 698  KTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWV 877
            K +  G S+HSSLDNGS +H  RRGP H   D      EGK +K G +SGYGSHEKQVWV
Sbjct: 445  KALGSGRSNHSSLDNGSQKHSGRRGPPHPVRDADGSTVEGKTVKRGGASGYGSHEKQVWV 504

Query: 878  QKSSPGS 898
            QKSS GS
Sbjct: 505  QKSSSGS 511


>ref|XP_011047883.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Populus euphratica] gi|743908840|ref|XP_011047884.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X1 [Populus euphratica]
          Length = 518

 Score =  237 bits (605), Expect = 2e-59
 Identities = 142/309 (45%), Positives = 171/309 (55%), Gaps = 10/309 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK +SG +KS Y+ VPK DD+   K                       D     
Sbjct: 212  YVLRDTAKGTSGKEKSIYAQVPKLDDRRLSKAVTLGSGSGTEVSEEETAVSGITDTGKKK 271

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEAH 355
                   E+EI                 +NI+ S A K +QR ES+GR+IK ILL+K++ 
Sbjct: 272  ILLLKGKEKEISLVTGITSQQQSISTSDRNIISSTALK-SQRHESSGRVIKSILLHKDSR 330

Query: 356  RSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQER 511
            R Q+     E QMQ S+LEKDKRPPRPPH  LV+KD NG PD + + NDLH   ++KQER
Sbjct: 331  RIQSSGVQSEPQMQTSNLEKDKRPPRPPHT-LVLKDANGTPDDQAVANDLHGFPNEKQER 389

Query: 512  RTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            RTRNKDRPDR VWTLRR                          + + GD K+D  N+RSG
Sbjct: 390  RTRNKDRPDRVVWTLRRSEGSCASDESLSSSASLSTQSGFDSSQVNHGDVKVDTLNLRSG 449

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQV 871
            EVK +  G S+HSSLDNGS +H  RRGP H   D      EGK +K G +SGYGSHEKQV
Sbjct: 450  EVKALGSGRSNHSSLDNGSQKHSGRRGPPHPVRDADGSTVEGKTVKRGGASGYGSHEKQV 509

Query: 872  WVQKSSPGS 898
            WVQKSS GS
Sbjct: 510  WVQKSSSGS 518


>ref|XP_011028362.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Populus euphratica]
          Length = 521

 Score =  237 bits (605), Expect = 2e-59
 Identities = 141/310 (45%), Positives = 172/310 (55%), Gaps = 11/310 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK++SG DKSTY  VPK+D Q                           D+    
Sbjct: 213  YVLRDTAKSTSGKDKSTYVQVPKRDGQQLSNAVTLGSGSGTAVLEDESGVSGITDSGKKK 272

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEAH 355
                   E+EI                 +NI+ S   K +QRRE++GR+I+ ILLNK++ 
Sbjct: 273  ILLLKGKEKEISLVTGTMAQQQSISSSDRNIISSTVLK-SQRRETSGRMIRSILLNKDSR 331

Query: 356  RSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQER 511
              ++     E QMQ S+LEKDKRPPRPPH QL +KD NG PD K + NDLH   ++KQE+
Sbjct: 332  HIRSSGVHSEPQMQTSNLEKDKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEK 391

Query: 512  RTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRS 688
            RTRNKDRPDRGVWT LRR                          +G+ GD K+D  N+RS
Sbjct: 392  RTRNKDRPDRGVWTPLRRSDGSYASDESLSSSASQSTQSVFDSSQGNHGDVKVDNLNLRS 451

Query: 689  GEVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQ 868
            GEVK +  G S+HSSLDNGSH+H  RRGP H   D      E K  K G +SGYGSHEKQ
Sbjct: 452  GEVKVLGSGRSNHSSLDNGSHKHFGRRGPSHIVRDAEGSAVEAKTPKRGGASGYGSHEKQ 511

Query: 869  VWVQKSSPGS 898
            VWVQKS+ GS
Sbjct: 512  VWVQKSTSGS 521


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  236 bits (602), Expect = 4e-59
 Identities = 140/307 (45%), Positives = 171/307 (55%), Gaps = 11/307 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK++SG DKSTY  VPK+DDQ                           D+    
Sbjct: 213  YVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTLGSGSGTAVLEDESVVSGITDSGKKK 272

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEAH 355
                   E+EI                 +NI+ S A K +QRRE++GR+I+ ILLNK++ 
Sbjct: 273  ILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALK-SQRRETSGRMIRSILLNKDSR 331

Query: 356  RSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQER 511
              ++     E QMQ S+LEK+KRPPRPPH QL +KD NG PD K + NDLH   ++KQE+
Sbjct: 332  HIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEK 391

Query: 512  RTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRS 688
            RTRNKDRPDRGVWT LRR                          +G+ GD K+D  N+RS
Sbjct: 392  RTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFDSSQGNHGDVKVDSLNLRS 451

Query: 689  GEVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQ 868
            GEVK +  G  +HSSLDNGSH+H  RRGP H   D      E K  K G SSGYGSHEKQ
Sbjct: 452  GEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKRGGSSGYGSHEKQ 511

Query: 869  VWVQKSS 889
            VWVQKS+
Sbjct: 512  VWVQKST 518


>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
            gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  236 bits (601), Expect = 5e-59
 Identities = 148/309 (47%), Positives = 180/309 (58%), Gaps = 10/309 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRD+ KN+SG DKSTY LV K+D+Q   DK                       DA   
Sbjct: 213  YVLRDSLKNASGKDKSTYILVSKRDEQQLSDKHVALASSMGTEISEEESGVPGITDAVKK 272

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEA 352
                    E+EI                 K ILGS   K+N RRE  GR+I+GILLNK+A
Sbjct: 273  KVLLLKGKEKEISPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNKDA 330

Query: 353  HRSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH-SKKQERR 514
             ++Q+     EQQ++ S+LEKD+RPPR  H  LV+KDTN   D K + NDLH S+K ERR
Sbjct: 331  RQNQSSGVQSEQQIRTSNLEKDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHGSEKPERR 390

Query: 515  TRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGE 694
             RNKDRPDRGVWTLRR                          EG++GD K+D+SNVRS +
Sbjct: 391  CRNKDRPDRGVWTLRRSDGSYASDESMSSSASQSALIPLDPLEGTYGDTKVDLSNVRSVQ 450

Query: 695  VKTVRCGHSSHSSLDNGSH-RHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQV 871
            VKTV  G   +SSLDNGSH +H+ RRG +    DGSSV+S+GKP K G ++GYGSHEKQV
Sbjct: 451  VKTV--GSGRNSSLDNGSHNKHVSRRGAV---ADGSSVMSDGKPGKRGCAAGYGSHEKQV 505

Query: 872  WVQKSSPGS 898
            WVQKSS GS
Sbjct: 506  WVQKSSSGS 514


>ref|XP_011047887.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X4
            [Populus euphratica]
          Length = 510

 Score =  235 bits (599), Expect = 8e-59
 Identities = 142/307 (46%), Positives = 171/307 (55%), Gaps = 8/307 (2%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK +SG +KS Y+ VPK DD+   K                       D     
Sbjct: 212  YVLRDTAKGTSGKEKSIYAQVPKLDDRRLSKAVTLGSGSGTEVSEEETVSGIT-DTGKKK 270

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXXKNILGSPAPKRNQRRESNGRIIKGILLNKEAHRS 361
                   E+EI               +NI+ S A K +QR ES+GR+IK ILL+K++ R 
Sbjct: 271  ILLLKGKEKEISLQQSISTSD-----RNIISSTALK-SQRHESSGRVIKSILLHKDSRRI 324

Query: 362  QA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQERRT 517
            Q+     E QMQ S+LEKDKRPPRPPH  LV+KD NG PD + + NDLH   ++KQERRT
Sbjct: 325  QSSGVQSEPQMQTSNLEKDKRPPRPPHT-LVLKDANGTPDDQAVANDLHGFPNEKQERRT 383

Query: 518  RNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEV 697
            RNKDRPDR VWTLRR                          + + GD K+D  N+RSGEV
Sbjct: 384  RNKDRPDRVVWTLRRSEGSCASDESLSSSASLSTQSGFDSSQVNHGDVKVDTLNLRSGEV 443

Query: 698  KTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWV 877
            K +  G S+HSSLDNGS +H  RRGP H   D      EGK +K G +SGYGSHEKQVWV
Sbjct: 444  KALGSGRSNHSSLDNGSQKHSGRRGPPHPVRDADGSTVEGKTVKRGGASGYGSHEKQVWV 503

Query: 878  QKSSPGS 898
            QKSS GS
Sbjct: 504  QKSSSGS 510


>ref|XP_011047885.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Populus euphratica]
          Length = 517

 Score =  234 bits (597), Expect = 1e-58
 Identities = 142/309 (45%), Positives = 171/309 (55%), Gaps = 10/309 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK +SG +KS Y+ VPK DD+   K                       D     
Sbjct: 212  YVLRDTAKGTSGKEKSIYAQVPKLDDRRLSKAVTLGSGSGTEVSEEETVSGIT-DTGKKK 270

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEAH 355
                   E+EI                 +NI+ S A K +QR ES+GR+IK ILL+K++ 
Sbjct: 271  ILLLKGKEKEISLVTGITSQQQSISTSDRNIISSTALK-SQRHESSGRVIKSILLHKDSR 329

Query: 356  RSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQER 511
            R Q+     E QMQ S+LEKDKRPPRPPH  LV+KD NG PD + + NDLH   ++KQER
Sbjct: 330  RIQSSGVQSEPQMQTSNLEKDKRPPRPPHT-LVLKDANGTPDDQAVANDLHGFPNEKQER 388

Query: 512  RTRNKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSG 691
            RTRNKDRPDR VWTLRR                          + + GD K+D  N+RSG
Sbjct: 389  RTRNKDRPDRVVWTLRRSEGSCASDESLSSSASLSTQSGFDSSQVNHGDVKVDTLNLRSG 448

Query: 692  EVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQV 871
            EVK +  G S+HSSLDNGS +H  RRGP H   D      EGK +K G +SGYGSHEKQV
Sbjct: 449  EVKALGSGRSNHSSLDNGSQKHSGRRGPPHPVRDADGSTVEGKTVKRGGASGYGSHEKQV 508

Query: 872  WVQKSSPGS 898
            WVQKSS GS
Sbjct: 509  WVQKSSSGS 517


>ref|XP_011028363.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Populus euphratica]
          Length = 520

 Score =  234 bits (597), Expect = 1e-58
 Identities = 141/310 (45%), Positives = 172/310 (55%), Gaps = 11/310 (3%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK++SG DKSTY  VPK+D Q                           D+    
Sbjct: 213  YVLRDTAKSTSGKDKSTYVQVPKRDGQQLSNAVTLGSGSGTAVLEDERVSGIT-DSGKKK 271

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEAH 355
                   E+EI                 +NI+ S   K +QRRE++GR+I+ ILLNK++ 
Sbjct: 272  ILLLKGKEKEISLVTGTMAQQQSISSSDRNIISSTVLK-SQRRETSGRMIRSILLNKDSR 330

Query: 356  RSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQER 511
              ++     E QMQ S+LEKDKRPPRPPH QL +KD NG PD K + NDLH   ++KQE+
Sbjct: 331  HIRSSGVHSEPQMQTSNLEKDKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEK 390

Query: 512  RTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRS 688
            RTRNKDRPDRGVWT LRR                          +G+ GD K+D  N+RS
Sbjct: 391  RTRNKDRPDRGVWTPLRRSDGSYASDESLSSSASQSTQSVFDSSQGNHGDVKVDNLNLRS 450

Query: 689  GEVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQ 868
            GEVK +  G S+HSSLDNGSH+H  RRGP H   D      E K  K G +SGYGSHEKQ
Sbjct: 451  GEVKVLGSGRSNHSSLDNGSHKHFGRRGPSHIVRDAEGSAVEAKTPKRGGASGYGSHEKQ 510

Query: 869  VWVQKSSPGS 898
            VWVQKS+ GS
Sbjct: 511  VWVQKSTSGS 520


>ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa]
            gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
            [Populus trichocarpa]
          Length = 527

 Score =  229 bits (584), Expect = 4e-57
 Identities = 140/314 (44%), Positives = 171/314 (54%), Gaps = 18/314 (5%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGFDKPXXXXXXXXXXXXXXXXXXXXNCDAXXXX 181
            YVLRDTAK++SG DKSTY  VPK+DDQ                           D+    
Sbjct: 213  YVLRDTAKSTSGKDKSTYVHVPKRDDQQLSNAVTLGSGSGTAVLEDESVVSGITDSGKKK 272

Query: 182  XXXXXXXEREIXXXXXXXXXXXXXXX--KNILGSPAPKRNQRRESNGRIIKGILLNKEAH 355
                   E+EI                 +NI+ S A K +QRRE++GR+I+ ILLNK++ 
Sbjct: 273  ILLLKGKEKEISLVTGTMSQQQSISSSDRNIISSTALK-SQRRETSGRMIRSILLNKDSR 331

Query: 356  RSQA-----EQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH---SKKQER 511
              ++     E QMQ S+LEK+KRPPRPPH QL +KD NG PD K + NDLH   ++KQE+
Sbjct: 332  HIRSSGVHSEPQMQTSNLEKEKRPPRPPHAQLGLKDANGTPDDKVVGNDLHGFPNEKQEK 391

Query: 512  RTRNKDRPDRGVWT-LRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRS 688
            RTRNKDRPDRGVWT LRR                          +G+ GD K+D  N+RS
Sbjct: 392  RTRNKDRPDRGVWTPLRRSDGSYASDESLLSSASQSTQSVFDSSQGNHGDVKVDSLNLRS 451

Query: 689  GEVKTVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHE-- 862
            GEVK +  G  +HSSLDNGSH+H  RRGP H   D      E K  K G SSGYGSHE  
Sbjct: 452  GEVKVLGSGRGNHSSLDNGSHKHFGRRGPSHIVRDADGSTVEAKTPKRGGSSGYGSHEVC 511

Query: 863  -----KQVWVQKSS 889
                 KQVWVQKS+
Sbjct: 512  SLDSQKQVWVQKST 525


>ref|XP_012436519.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Gossypium raimondii] gi|823204582|ref|XP_012436520.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X1 [Gossypium raimondii]
          Length = 523

 Score =  215 bits (547), Expect = 8e-53
 Identities = 141/306 (46%), Positives = 168/306 (54%), Gaps = 7/306 (2%)
 Frame = +2

Query: 2    YVLRDTAKNSSGNDKSTYSLVPKQDDQGF-DKPXXXXXXXXXXXXXXXXXXXXNCDAXXX 178
            YVLRD+ KN+SG DKS Y LV K+DD+   DK                       DA   
Sbjct: 227  YVLRDSLKNASGKDKSAYILVSKRDDKQLSDKHATLATPVGTQISEEESGVSGITDAGKK 286

Query: 179  XXXXXXXXEREIXXXXXXXXXXXXXXXK--NILGSPAPKRNQRRESNGRIIKGILLNKEA 352
                    ERE                    ILGS   K+N  RE  GRII+G+LLNK+A
Sbjct: 287  KVLLLKGKEREFSHVAGSMLRQQDIASPITKILGSTPIKQNVGRE--GRIIRGVLLNKDA 344

Query: 353  HRS---QAEQQMQNSDLEKDKRPPRPPHVQLVVKDTNGVPDGKHIVNDLH-SKKQERRTR 520
              S   Q+EQQ+Q  +LEKD+RP R  H QLV+KDTN   D   + +DLH S+K ERR R
Sbjct: 345  RESSRVQSEQQLQAPNLEKDRRPSRHSHAQLVLKDTNSSDD--KVGSDLHGSEKPERRRR 402

Query: 521  NKDRPDRGVWTLRRXXXXXXXXXXXXXXXXXXXXXXXXXXEGSFGDGKIDVSNVRSGEVK 700
            NKDRPDRGVWTLRR                          EG++GD K+D+SNVRS + K
Sbjct: 403  NKDRPDRGVWTLRRSDGSYASDESLSSSASQSAQMPLDSSEGAYGDTKVDLSNVRSMQPK 462

Query: 701  TVRCGHSSHSSLDNGSHRHIDRRGPIHSKVDGSSVISEGKPLKSGNSSGYGSHEKQVWVQ 880
            TVR G +S  S D GS +H  R G +    DGSSV+S+GKP K GN+S YGSHEKQVWVQ
Sbjct: 463  TVRSGRNS--SFDGGSSKHGSRCGAV---ADGSSVVSDGKPGKRGNASAYGSHEKQVWVQ 517

Query: 881  KSSPGS 898
            KSS GS
Sbjct: 518  KSSSGS 523