BLASTX nr result
ID: Zanthoxylum22_contig00009120
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00009120
(2365 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr... 1306 0.0
gb|KDO52429.1| hypothetical protein CISIN_1g001050mg [Citrus sin... 1279 0.0
ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV a... 1133 0.0
ref|XP_008220676.1| PREDICTED: DNA-directed RNA polymerases IV a... 1113 0.0
ref|XP_008220675.1| PREDICTED: DNA-directed RNA polymerases IV a... 1113 0.0
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun... 1111 0.0
ref|XP_008379016.1| PREDICTED: DNA-directed RNA polymerases IV a... 1108 0.0
ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theob... 1107 0.0
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob... 1107 0.0
ref|XP_008357267.1| PREDICTED: DNA-directed RNA polymerases IV a... 1102 0.0
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [... 1101 0.0
ref|XP_009363651.1| PREDICTED: DNA-directed RNA polymerases IV a... 1099 0.0
ref|XP_009347298.1| PREDICTED: DNA-directed RNA polymerases IV a... 1097 0.0
gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like pr... 1097 0.0
gb|KJB07693.1| hypothetical protein B456_001G037900 [Gossypium r... 1090 0.0
ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D sub... 1090 0.0
ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV a... 1089 0.0
ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV a... 1075 0.0
ref|XP_010101029.1| DNA-directed RNA polymerase D subunit 2a [Mo... 1072 0.0
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ... 1068 0.0
>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Citrus sinensis]
gi|557545145|gb|ESR56123.1| hypothetical protein
CICLE_v10018562mg [Citrus clementina]
Length = 1198
Score = 1306 bits (3379), Expect = 0.0
Identities = 638/752 (84%), Positives = 690/752 (91%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXSINDIGEGFLKIFCRKASMAFFN 2078
MGASSNAKEDIAMSSKGE S+ D+GE FLK FCRKA+++FFN
Sbjct: 1 MGASSNAKEDIAMSSKGENISGQDDMDSDDNGFIDPTSLRDLGEEFLKTFCRKAAVSFFN 60
Query: 2077 ENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQVTLDK 1898
E GL+SHQINSYN+FIKNGLQ+AFDSFGETIVEPGYDPSKKGEGEWRYASM+FGQVTLDK
Sbjct: 61 EYGLVSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDPSKKGEGEWRYASMRFGQVTLDK 120
Query: 1897 PSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQFVQKE 1718
PSFFAG+ DEH+M PRHARLQNMTYS RMKV VQ Q+Y+ +RVTSDKFKTGREQ++QKE
Sbjct: 121 PSFFAGNGGDEHDMFPRHARLQNMTYSSRMKVKVQFQVYTQKRVTSDKFKTGREQYIQKE 180
Query: 1717 VHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICMKR 1538
V SDE DI+IGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQIC+KR
Sbjct: 181 VLSDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICLKR 240
Query: 1537 LWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFFAL 1358
LW+SNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFFAL
Sbjct: 241 LWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFFAL 300
Query: 1357 GVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFRKEWNALKHVEKLVKSTTFPP 1178
GV+SDKE+++LIDFT ED SILNILFASIHDAD+KCDEFRK NALK+V+KL+K TTFPP
Sbjct: 301 GVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFRKGRNALKYVDKLIKGTTFPP 360
Query: 1177 GESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRNKRLELAGEL 998
GES EEC++ YLFPSL G+KQKARFLGYMVKCLLQAYSGRRKCD+RD FRNKRLELAGEL
Sbjct: 361 GESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRDDFRNKRLELAGEL 420
Query: 997 LDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFSTGAWSHPYK 818
L+RELKVHIAHARKRM KALQRDLYGDRTVRPIEYYLDASI+TNGLSRAFSTGAWSHP+K
Sbjct: 421 LERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFSTGAWSHPFK 480
Query: 817 RSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKICFLSTPDGE 638
R+ERISGIVANLGRANPLQTLVDLRRTRQQV+YTGKVGDARYPHPSHWGKICFLSTPDGE
Sbjct: 481 RTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKICFLSTPDGE 540
Query: 637 NCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVNGDWVGVCLD 458
NCGLVKNLG+TGLVST+ L PI +QL +SGME L DD S SL GK+KVFV+GDW+GVC D
Sbjct: 541 NCGLVKNLGVTGLVSTSILEPIFEQLFNSGMEKLADDASYSLGGKFKVFVDGDWIGVCKD 600
Query: 457 SLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENLGRIKSQIGK 278
SLSFV ELR KRRR+ELP QVEIKRDE Q EVRIF+DAGRILRPLLVVEN+G+IKS GK
Sbjct: 601 SLSFVSELRRKRRRKELPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENMGKIKSLEGK 660
Query: 277 SYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELDMSFLLGLSC 98
+YTFQ+LLD+GIIELVGTEEEEDCCTAWGIK+LLK+ EDKKP KFTHCELDMSFLLGLSC
Sbjct: 661 NYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELDMSFLLGLSC 720
Query: 97 GIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
GIIPFANHDHARRVLYQSQKHSSQAIGFPTTN
Sbjct: 721 GIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 752
>gb|KDO52429.1| hypothetical protein CISIN_1g001050mg [Citrus sinensis]
Length = 1173
Score = 1279 bits (3310), Expect = 0.0
Identities = 619/712 (86%), Positives = 671/712 (94%)
Frame = -1
Query: 2137 DIGEGFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSK 1958
D+GE FLK FCRKA+++FFNE GL+SHQINSYN+FIKNGLQ+AFDSFGETIVEPGYDPSK
Sbjct: 16 DLGEEFLKTFCRKAAVSFFNEYGLVSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDPSK 75
Query: 1957 KGEGEWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQIYS 1778
KGEGEWRYASM+FGQVTLDKPSFFAG+ DEH+M PRHARLQNMTYS RMKV VQ Q+Y+
Sbjct: 76 KGEGEWRYASMRFGQVTLDKPSFFAGNGGDEHDMFPRHARLQNMTYSSRMKVKVQFQVYT 135
Query: 1777 HERVTSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGY 1598
+RVTSDKFKTGREQ++QKEV SDET +I+IGRIPVMVKSDLCWMKGVEKGDCDFDHGGY
Sbjct: 136 QKRVTSDKFKTGREQYIQKEVLSDETTNIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGY 195
Query: 1597 FIIKGAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEK 1418
FIIKGAEKVFVAQEQIC+KRLW+SNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEK
Sbjct: 196 FIIKGAEKVFVAQEQICLKRLWVSNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEK 255
Query: 1417 VLSVYFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFR 1238
VLSVYFLSTEIPIWILFFALGV+SDKE+++LIDFT ED SILNILFASIHDAD+KCDEFR
Sbjct: 256 VLSVYFLSTEIPIWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFR 315
Query: 1237 KEWNALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGR 1058
K NALK+V+KL+K TTFPPGES EEC++ YLFPSL G+KQKARFLGYMVKCLLQAYSGR
Sbjct: 316 KGRNALKYVDKLIKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGR 375
Query: 1057 RKCDSRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDAS 878
RKCD+RD FRNKRLELAGELL+RELKVHIAHARKRM KALQRDLYGDRTVRPIEYYLDAS
Sbjct: 376 RKCDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDAS 435
Query: 877 IITNGLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDA 698
I+TNGLSRAFSTGAWSHP+KR+ERISGIVANLGRANPLQTLVDLRRTRQQV+YTGKVGDA
Sbjct: 436 ILTNGLSRAFSTGAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDA 495
Query: 697 RYPHPSHWGKICFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTST 518
RYPHPSHWGKICFLSTPDGENCGLVKNLG+TGLVST+ L PI +QL +SGME L DD S
Sbjct: 496 RYPHPSHWGKICFLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNSGMEKLADDASY 555
Query: 517 SLEGKYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGR 338
SL GK+KVFV+GDW+GVC DSLSFV ELR KRRR+ELP QVEIKRDE Q EVRIF+DAGR
Sbjct: 556 SLGGKFKVFVDGDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQSEVRIFMDAGR 615
Query: 337 ILRPLLVVENLGRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDK 158
ILRPLLVVEN+G+IKS GK+YTFQ+LLD+GIIELVGTEEEEDCCTAWGIK+LLK+ EDK
Sbjct: 616 ILRPLLVVENMGKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDK 675
Query: 157 KPKKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
KP KFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN
Sbjct: 676 KPIKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 727
>ref|XP_012076429.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Jatropha curcas] gi|802626342|ref|XP_012076430.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Jatropha curcas] gi|643724314|gb|KDP33515.1|
hypothetical protein JCGZ_07086 [Jatropha curcas]
Length = 1209
Score = 1133 bits (2931), Expect = 0.0
Identities = 556/768 (72%), Positives = 640/768 (83%), Gaps = 16/768 (2%)
Frame = -1
Query: 2257 MGASSNA-KEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS---------------INDIGE 2126
MG S +A +EDI S+KGEK ++++GE
Sbjct: 1 MGESVDAMEEDIGTSNKGEKLSNGFDMDIDMNNDDDDDDYDSDDDVDFMELNTSLSEMGE 60
Query: 2125 GFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEG 1946
+LK FC++A+ FFNE GLISHQINSYNDFI NGLQ+AFDSFGE +VEPGYDPSKKGE
Sbjct: 61 PYLKDFCKRAATLFFNEYGLISHQINSYNDFIGNGLQKAFDSFGELVVEPGYDPSKKGEN 120
Query: 1945 EWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERV 1766
EWRYAS++FG+VTLDKPSF+ GS +HNMLPRHARLQNMTYS RMKVNV +++Y+ + +
Sbjct: 121 EWRYASVRFGKVTLDKPSFWGGSDGTDHNMLPRHARLQNMTYSSRMKVNVTVEVYTQKVI 180
Query: 1765 TSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIK 1586
SDKFKTG++QFV K V S + +DI+IGRIPVMVKSDLCWMK E+ DCDFDHGGYF+IK
Sbjct: 181 RSDKFKTGKDQFVDKVVLSTDNRDIIIGRIPVMVKSDLCWMKTAERSDCDFDHGGYFLIK 240
Query: 1585 GAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSV 1406
GAEKVF+AQEQ+C+KRLWISN WTV+YKSE KRNRLIVRLVD+SK EDIKG +K L+V
Sbjct: 241 GAEKVFIAQEQVCLKRLWISNIQSWTVSYKSEIKRNRLIVRLVDLSKVEDIKGEKKGLNV 300
Query: 1405 YFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFRKEWN 1226
YFLSTEIP+WILFFALG+ SDKEVIDLID+ +ED SI+NI FASIHDAD+KC+ FR +
Sbjct: 301 YFLSTEIPLWILFFALGITSDKEVIDLIDYNTEDASIVNIFFASIHDADEKCEGFRNDRE 360
Query: 1225 ALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCD 1046
AL +V K ++ T FPPGE+ E+CIS+YLFPSL +QKARFLGYMVKCLLQAYSG+RKCD
Sbjct: 361 ALGYVIKQIQGTRFPPGET-EDCISLYLFPSLHSPRQKARFLGYMVKCLLQAYSGQRKCD 419
Query: 1045 SRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITN 866
+RD FRNKR ELAGELLDRELKVHIAHAR+RM KALQ+DLYGDR VRPIE+YLDASI+TN
Sbjct: 420 NRDSFRNKRFELAGELLDRELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTN 479
Query: 865 GLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPH 686
GLSRAFSTGAWSHP+KR ERISG+VANLGR NPLQT+VDLR+TRQQV+YTGKVGDARYPH
Sbjct: 480 GLSRAFSTGAWSHPFKRMERISGVVANLGRTNPLQTMVDLRKTRQQVQYTGKVGDARYPH 539
Query: 685 PSHWGKICFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEG 506
PSHWG++CFLSTPDGENCGLVKNL ITGLVST L P++D L D GM+ LVDDT T L+
Sbjct: 540 PSHWGRVCFLSTPDGENCGLVKNLAITGLVSTEILEPLIDILFDCGMDKLVDDTHTKLDE 599
Query: 505 KYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRP 326
KYKVF+NG+WVGVC DS FV ELR RRR++LP QVEIKRDE+Q EVRIF DAGRILRP
Sbjct: 600 KYKVFLNGEWVGVCEDSNLFVAELRRLRRRKKLPRQVEIKRDEQQKEVRIFADAGRILRP 659
Query: 325 LLVVENLGRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKK 146
LLVVENL +IK+ G +YTFQSLLD GIIE +GTEEEEDC TAWGIK L+ + K+P K
Sbjct: 660 LLVVENLHKIKAFKGGNYTFQSLLDKGIIEFIGTEEEEDCSTAWGIKFLVAGVDKKQPLK 719
Query: 145 FTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
+THCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGFPTTN
Sbjct: 720 YTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTN 767
>ref|XP_008220676.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X2 [Prunus mume]
Length = 1200
Score = 1113 bits (2879), Expect = 0.0
Identities = 547/761 (71%), Positives = 642/761 (84%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASS+AK DI MSSKGE I+D+GEGFLKIFC++A++
Sbjct: 1 MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSTSIHDLGEGFLKIFCKEAAI 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
AFFNE GLISHQINSYNDFIKNG+Q+ FDSFGE IVEPGYDPSKKGE EWRYAS+KFG+V
Sbjct: 61 AFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL PSF+ GS ++ E+ MLPRHARLQNM+Y+ +MKVN+ +++Y+ + V+SDKFKTG+ Q
Sbjct: 121 TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKAQ 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
++ K++ S +T+DI+IG +PVMVKSDLCWMK EKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+KRL I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+WI
Sbjct: 241 SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDAD---DKCDE-FRKEWNALKHVEK 1205
FFALGV+SD+EV++LID+ SED SI NILFASI DAD DK D FR+ NALK+V++
Sbjct: 301 WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDE 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
+++ T FPPGES+EECIS+YLFP+L+G KQKARFLGYMVK LLQAY+GRRKCD+RD FRN
Sbjct: 361 VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+RM KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+KR ER+SG+VA +GRANPLQT+VD+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL TGLVSTN L ++ QLL GME LVDDT TSL GK KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP+QVEIKRD Q EVRIF DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
++KS G +FQ LDNGIIEL+G EEEEDC TAWGIK+L E++ K KFTHCELD
Sbjct: 661 NKVKSSKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
MSFLLGLSCGIIP+ANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 721 MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTN 761
>ref|XP_008220675.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
isoform X1 [Prunus mume]
Length = 1212
Score = 1113 bits (2879), Expect = 0.0
Identities = 547/761 (71%), Positives = 642/761 (84%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASS+AK DI MSSKGE I+D+GEGFLKIFC++A++
Sbjct: 1 MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSTSIHDLGEGFLKIFCKEAAI 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
AFFNE GLISHQINSYNDFIKNG+Q+ FDSFGE IVEPGYDPSKKGE EWRYAS+KFG+V
Sbjct: 61 AFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL PSF+ GS ++ E+ MLPRHARLQNM+Y+ +MKVN+ +++Y+ + V+SDKFKTG+ Q
Sbjct: 121 TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKAQ 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
++ K++ S +T+DI+IG +PVMVKSDLCWMK EKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+KRL I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+WI
Sbjct: 241 SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDAD---DKCDE-FRKEWNALKHVEK 1205
FFALGV+SD+EV++LID+ SED SI NILFASI DAD DK D FR+ NALK+V++
Sbjct: 301 WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDE 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
+++ T FPPGES+EECIS+YLFP+L+G KQKARFLGYMVK LLQAY+GRRKCD+RD FRN
Sbjct: 361 VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+RM KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+KR ER+SG+VA +GRANPLQT+VD+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL TGLVSTN L ++ QLL GME LVDDT TSL GK KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP+QVEIKRD Q EVRIF DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
++KS G +FQ LDNGIIEL+G EEEEDC TAWGIK+L E++ K KFTHCELD
Sbjct: 661 NKVKSSKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSAAKFTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
MSFLLGLSCGIIP+ANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 721 MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTN 761
>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
gi|462422378|gb|EMJ26641.1| hypothetical protein
PRUPE_ppa000410mg [Prunus persica]
Length = 1200
Score = 1111 bits (2873), Expect = 0.0
Identities = 545/761 (71%), Positives = 641/761 (84%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASS+AK DI MSSKGE I+D+GEGFLK FC++A++
Sbjct: 1 MGASSDAKGDIGMSSKGESFSDIADMDIDDNGYDDDYDYSTSIHDLGEGFLKFFCKEAAI 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
AFFNE GLISHQINSYNDFIKNG+Q+ FDSFGE IVEPGYDPSKKGE EWRYAS+KFG+V
Sbjct: 61 AFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSKKGESEWRYASVKFGKV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL PSF+ GS ++ E+ MLPRHARLQNM+Y+ +MKVN+ +++Y+ + V+SDKFKTG+ Q
Sbjct: 121 TLGMPSFWGGSDDEKEYKMLPRHARLQNMSYASKMKVNITVEVYTQKLVSSDKFKTGKSQ 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
++ K++ S +T+DI+IG +PVMVKSDLCWMK EKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 YLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+KRL I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+WI
Sbjct: 241 SCLKRLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWI 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDAD---DKCDE-FRKEWNALKHVEK 1205
FFALGV+SD+EV++LID+ SED SI NILFASI DAD DK D FR+ NALK+V++
Sbjct: 301 WFFALGVSSDREVMNLIDYDSEDASISNILFASIRDADKLNDKVDGGFRRGKNALKYVDE 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
+++ T FPPGES+EECIS+YLFP+L+G KQKARFLGYMVK LLQAY+GRRKCD+RD FRN
Sbjct: 361 VIRKTAFPPGESMEECISLYLFPNLKGLKQKARFLGYMVKSLLQAYAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+RM KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRAVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+KR ER+SG+VA +GRANPLQT+VD+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKRMERMSGVVATVGRANPLQTMVDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL TGLVSTN L ++ QLL GME LVDDT TSL GK KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTGLVSTNVLESLIPQLLTCGMEKLVDDTFTSLRGKDKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP+QVEIKRD Q EVRIF DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVLELRRMRRRKKLPHQVEIKRDVHQGEVRIFSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
++K+ G +FQ LDNGIIEL+G EEEEDC TAWGIK+L E++ K KFTHCELD
Sbjct: 661 NKVKASKGGKSSFQYFLDNGIIELIGAEEEEDCSTAWGIKYLFMEDKGKSATKFTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
MSFLLGLSCGIIP+ANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 721 MSFLLGLSCGIIPYANHDHARRVLYQAQKHSQQAIGFSTTN 761
>ref|XP_008379016.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Malus domestica] gi|657945275|ref|XP_008379020.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Malus domestica]
Length = 1203
Score = 1108 bits (2867), Expect = 0.0
Identities = 542/761 (71%), Positives = 635/761 (83%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASS+AK DI MSSKGE +ND+GEG LK FC++A+
Sbjct: 1 MGASSDAKGDIGMSSKGESFTNGVDMDIDDSDYDDEHDYSTSLNDLGEGLLKNFCKEAAT 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
+FFNE GLISHQINSYNDFIKNG+Q+ F SFGE +VEPGYDPSKKG+ EWRYA +KFG V
Sbjct: 61 SFFNEYGLISHQINSYNDFIKNGIQRVFSSFGEIVVEPGYDPSKKGDNEWRYALVKFGTV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL +PSF+ GS D E+NMLPRHARLQNMTY +MKVN+ +++Y+ V+SDKFKTG+E+
Sbjct: 121 TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCSKMKVNITVEVYNQRLVSSDKFKTGKER 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
F+ KE+ S +T+DI +G +PVMVKSDLCWMK VEKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 FLDKEILSTDTRDITVGSVPVMVKSDLCWMKDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+K+L I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+W+
Sbjct: 241 SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE----FRKEWNALKHVEK 1205
FFALGV+SD+EVIDLID+ SED SILNILFASI DAD ++ FR+ NALK+V+
Sbjct: 301 WFFALGVSSDREVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
++K T FPPGESIEECIS+YLFP+LRG KQKARFLGYMVK LLQA +GRRKCD+RD FRN
Sbjct: 361 VIKKTAFPPGESIEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+RM KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+KR ER+SG+VAN+GRANPLQT++D+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKRMERMSGVVANVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL TGLVSTN L +L +L GME LVDDTSTSL+GK KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTGLVSTNVLESLLPELSLCGMEKLVDDTSTSLQGKLKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP QVEIKRDE+Q EVR++ DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
+IK+ G Y FQ LD GII+L+G EEEEDC TAWGIK+L E + K K+THCELD
Sbjct: 661 NKIKAFKGGKYPFQYFLDKGIIDLIGAEEEEDCSTAWGIKYLFMEEKGKSAVKYTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
MSFLLGLSC IIPFANHDHARRVLYQ+QKHS+QAIGF TTN
Sbjct: 721 MSFLLGLSCSIIPFANHDHARRVLYQAQKHSAQAIGFSTTN 761
>ref|XP_007011719.1| DNA-directed RNA polymerase isoform 3 [Theobroma cacao]
gi|508782082|gb|EOY29338.1| DNA-directed RNA polymerase
isoform 3 [Theobroma cacao]
Length = 1073
Score = 1107 bits (2862), Expect = 0.0
Identities = 534/714 (74%), Positives = 621/714 (86%)
Frame = -1
Query: 2143 INDIGEGFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDP 1964
+ +GE FL+ FC++A+++FF E GLISHQ+NSYN FIK GLQ FDSFGE ++ GYDP
Sbjct: 29 VQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDP 88
Query: 1963 SKKGEGEWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQI 1784
SKKGEG+WR+A ++FG+VT+++P+F+A S +E NMLPRHARLQNMTYS RMKVNV LQ+
Sbjct: 89 SKKGEGDWRHARVRFGKVTVERPTFWAVSGGNELNMLPRHARLQNMTYSSRMKVNVDLQV 148
Query: 1783 YSHERVTSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHG 1604
Y+ + V SDKFKTGRE+FV++EV + +DI+IGRIPVMV+SDLCWM VEK DCDFDHG
Sbjct: 149 YTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCDFDHG 208
Query: 1603 GYFIIKGAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGG 1424
GYF+IKG EK+F+AQEQI MKRLWISNS GWT+AY+SE KRNRLI+RLV+ SK E IKGG
Sbjct: 209 GYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGG 268
Query: 1423 EKVLSVYFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE 1244
EKVL+VYFLSTEIP+W+LFFALGV+SDKEV++LID+ S D SI NILFASI +AD KC +
Sbjct: 269 EKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNADGKCYK 328
Query: 1243 FRKEWNALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYS 1064
F + NA+ +V KLVK T FPP E IEEC+S YLFP+LR KQKARFLGYMVKCLLQAY+
Sbjct: 329 FCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYT 388
Query: 1063 GRRKCDSRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLD 884
GR KCD+RD FRNKRLELAGELL+RELKVHIAHAR+RM K LQRDLY DRTVRPIE+YLD
Sbjct: 389 GRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLD 448
Query: 883 ASIITNGLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVG 704
ASI+TNGLSRAFSTGAWSHPYKR ERISG+VANLGRANPLQT+VDLR+TRQQV+YTGKVG
Sbjct: 449 ASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVG 508
Query: 703 DARYPHPSHWGKICFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDT 524
DARYPHPSHWGK+CFLSTPDGENCGLVKNL TGLVSTN + I+D+L DSGME LV+DT
Sbjct: 509 DARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDSGMEELVNDT 568
Query: 523 STSLEGKYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDA 344
+SL+GK KVF+NG+WVGVC DSLSF E+R KRR +E P+QVEIKRDE + EVRIF D
Sbjct: 569 CSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDG 628
Query: 343 GRILRPLLVVENLGRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENE 164
GRILRPLLVV+NL RIK+ G++YTFQ+LL+ GIIELVGTEEEEDC TAW IK+LL + E
Sbjct: 629 GRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVE 688
Query: 163 DKKPKKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
K+P K+THCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 689 GKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 742
>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
isoform 1 [Theobroma cacao]
Length = 1184
Score = 1107 bits (2862), Expect = 0.0
Identities = 534/714 (74%), Positives = 621/714 (86%)
Frame = -1
Query: 2143 INDIGEGFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDP 1964
+ +GE FL+ FC++A+++FF E GLISHQ+NSYN FIK GLQ FDSFGE ++ GYDP
Sbjct: 29 VQQLGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDP 88
Query: 1963 SKKGEGEWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQI 1784
SKKGEG+WR+A ++FG+VT+++P+F+A S +E NMLPRHARLQNMTYS RMKVNV LQ+
Sbjct: 89 SKKGEGDWRHARVRFGKVTVERPTFWAVSGGNELNMLPRHARLQNMTYSSRMKVNVDLQV 148
Query: 1783 YSHERVTSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHG 1604
Y+ + V SDKFKTGRE+FV++EV + +DI+IGRIPVMV+SDLCWM VEK DCDFDHG
Sbjct: 149 YTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCDFDHG 208
Query: 1603 GYFIIKGAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGG 1424
GYF+IKG EK+F+AQEQI MKRLWISNS GWT+AY+SE KRNRLI+RLV+ SK E IKGG
Sbjct: 209 GYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEVKRNRLIIRLVENSKVEYIKGG 268
Query: 1423 EKVLSVYFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE 1244
EKVL+VYFLSTEIP+W+LFFALGV+SDKEV++LID+ S D SI NILFASI +AD KC +
Sbjct: 269 EKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASIRNADGKCYK 328
Query: 1243 FRKEWNALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYS 1064
F + NA+ +V KLVK T FPP E IEEC+S YLFP+LR KQKARFLGYMVKCLLQAY+
Sbjct: 329 FCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYMVKCLLQAYT 388
Query: 1063 GRRKCDSRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLD 884
GR KCD+RD FRNKRLELAGELL+RELKVHIAHAR+RM K LQRDLY DRTVRPIE+YLD
Sbjct: 389 GRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLD 448
Query: 883 ASIITNGLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVG 704
ASI+TNGLSRAFSTGAWSHPYKR ERISG+VANLGRANPLQT+VDLR+TRQQV+YTGKVG
Sbjct: 449 ASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVG 508
Query: 703 DARYPHPSHWGKICFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDT 524
DARYPHPSHWGK+CFLSTPDGENCGLVKNL TGLVSTN + I+D+L DSGME LV+DT
Sbjct: 509 DARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDSGMEELVNDT 568
Query: 523 STSLEGKYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDA 344
+SL+GK KVF+NG+WVGVC DSLSF E+R KRR +E P+QVEIKRDE + EVRIF D
Sbjct: 569 CSSLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEHKGEVRIFSDG 628
Query: 343 GRILRPLLVVENLGRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENE 164
GRILRPLLVV+NL RIK+ G++YTFQ+LL+ GIIELVGTEEEEDC TAW IK+LL + E
Sbjct: 629 GRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAWSIKYLLTDVE 688
Query: 163 DKKPKKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
K+P K+THCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 689 GKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 742
>ref|XP_008357267.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Malus domestica]
Length = 1203
Score = 1102 bits (2849), Expect = 0.0
Identities = 538/761 (70%), Positives = 637/761 (83%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASS+AK DI MSSKGE + D+GEGFLK FC++A+
Sbjct: 1 MGASSDAKGDIGMSSKGESFTNGVDMDIDDSDYDDEYDYSTSLQDLGEGFLKNFCKEAAT 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
+FFNE GLISHQINSYNDFI+NG+Q+ F SFGE IVEPGYDPSKKG+ EWRYA +KFG+V
Sbjct: 61 SFFNEYGLISHQINSYNDFIQNGIQRVFSSFGEIIVEPGYDPSKKGDNEWRYALVKFGKV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL +PSF+ GS D E+NMLPRHARLQNMTY +MKVN+ +++Y+ V+SDKFKTG+E+
Sbjct: 121 TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCAKMKVNITVEVYNQRLVSSDKFKTGKER 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
F+ KE+ S +T+DI IG +PVMVKSDLCWM+ VEKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 FLDKEILSTDTRDITIGSVPVMVKSDLCWMRDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+K+L I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+W+
Sbjct: 241 SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE----FRKEWNALKHVEK 1205
FFALGV+SDKEVIDLID+ SED SILNILFASI DAD ++ FR+ NALK+V+
Sbjct: 301 WFFALGVSSDKEVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
++K T FPPGES+EECIS+YLFP+LRG KQKARFLGYMVK LLQA +GRRKCD+RD FRN
Sbjct: 361 VIKKTAFPPGESMEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+RM KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+K+ ER+SG+VA +GRANPLQT++D+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKKMERMSGVVATVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL T +VSTN L +L +L GME LVDDTSTSL+GK+KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTTIVSTNILESLLPELSLXGMEKLVDDTSTSLQGKFKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP QVEIKRDE+Q EVR++ DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
+IK+ G+ + F+ LL+ GIIEL+G EEEEDC TAWGIK+L E + K K+THCELD
Sbjct: 661 NKIKALKGEKHPFKYLLNKGIIELIGAEEEEDCSTAWGIKYLFMEEKGKSAVKYTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
MSFLLGLSC IIPFANHDHARRVLYQ+QKHSSQAIGF TTN
Sbjct: 721 MSFLLGLSCSIIPFANHDHARRVLYQAQKHSSQAIGFSTTN 761
>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1181
Score = 1101 bits (2848), Expect = 0.0
Identities = 538/753 (71%), Positives = 625/753 (83%), Gaps = 1/753 (0%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXSINDIGEGFLKIFCRKASMAFFN 2078
MGASS+ ED+ SSKGE ++N++G+ L+ FC+KA+ FF+
Sbjct: 1 MGASSDYMEDVGPSSKGE---VDDMDMDMDEDLMDTTNLNELGKETLQSFCKKAASLFFD 57
Query: 2077 ENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQVTLDK 1898
E GLISHQINSYN FI +GLQ+ FDSFGE VEPGYD SK+ +GEWR AS++FG+VTLD+
Sbjct: 58 EYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDSSKQKDGEWRRASVRFGKVTLDR 117
Query: 1897 PSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQFVQK 1721
PSF+ G+ D EHNM PRHARLQNMTYS RMK++V +Q+Y+ SDKFKTG ++ VQK
Sbjct: 118 PSFWGGTSSDAEHNMFPRHARLQNMTYSARMKIHVNVQVYTQTVGRSDKFKTGIDKVVQK 177
Query: 1720 EVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICMK 1541
V E ++I+IGRIPVMVKSDLCW+ VEKGDCDFDHGGYF+IKGAEKVF+AQEQICMK
Sbjct: 178 NVVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCDFDHGGYFLIKGAEKVFIAQEQICMK 237
Query: 1540 RLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFFA 1361
RLWISNS GWTV+YKSE KRNRLIVRLV++SK E IKG +K L VYFLSTEIP+WILFFA
Sbjct: 238 RLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWILFFA 297
Query: 1360 LGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFRKEWNALKHVEKLVKSTTFP 1181
LGV SDKEVIDLID+ S D SI+NI FASIHDAD+KC+ FR+E AL +V+KL+K T FP
Sbjct: 298 LGVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKKTRFP 357
Query: 1180 PGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRNKRLELAGE 1001
P ESIE+ IS YLFP L + KARFLGYMVKCLL+AY+G RKCD+RD FRNKR ELA E
Sbjct: 358 PKESIEDAISAYLFPRLNSRRHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFELASE 417
Query: 1000 LLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFSTGAWSHPY 821
LL+RELKVH++HA +RMTKALQRDLYGDR V PIE+YLDASI+TNGL+RAFSTGAW HP+
Sbjct: 418 LLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAWCHPF 477
Query: 820 KRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKICFLSTPDG 641
K ER+SG+V NLGRANPLQT++DLR+TRQQV YTGKVGDARYPHPSHWG++CFLSTPDG
Sbjct: 478 KWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDG 537
Query: 640 ENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVNGDWVGVCL 461
ENCGLVKNL +TG+VSTN ++D+L DSGME LVDDT T L+GK+KVF+NG+WVGVC
Sbjct: 538 ENCGLVKNLAVTGVVSTNISESLVDKLFDSGMEKLVDDTYTKLDGKHKVFLNGEWVGVCE 597
Query: 460 DSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENLGRIKSQIG 281
DS FV ELRS RRR+ELP QVEIKRDE+Q EVRIF DAGRILRPLLVVENL +IK+ G
Sbjct: 598 DSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILRPLLVVENLDKIKAFKG 657
Query: 280 KSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELDMSFLLGLS 101
+Y F SLLD GIIE +GTEEEEDCCTAWGIK LL + E K+P K++HCELDMSFLLGLS
Sbjct: 658 GNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYSHCELDMSFLLGLS 717
Query: 100 CGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
CGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 718 CGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 750
>ref|XP_009363651.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri] gi|694312758|ref|XP_009363658.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Pyrus x bretschneideri]
gi|694312760|ref|XP_009363667.1| PREDICTED: DNA-directed
RNA polymerases IV and V subunit 2-like [Pyrus x
bretschneideri] gi|694312763|ref|XP_009363676.1|
PREDICTED: DNA-directed RNA polymerases IV and V subunit
2-like [Pyrus x bretschneideri]
Length = 1203
Score = 1099 bits (2842), Expect = 0.0
Identities = 540/761 (70%), Positives = 630/761 (82%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASSNAK DI MSSKGE +ND+GEG L FC++A+
Sbjct: 1 MGASSNAKGDIGMSSKGESFTNGVDMDIDDSDYDDEHDYSTSLNDLGEGLLMNFCKEAAT 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
+FF E GLISHQINSYNDFIKNG+Q+ F SFGE +VEPGYDPSKKG+ EWRYA +KFG V
Sbjct: 61 SFFVEYGLISHQINSYNDFIKNGIQRVFSSFGEIVVEPGYDPSKKGDNEWRYALVKFGTV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL +PSF+ GS D E+NMLPRHARLQNMTY +MKVN+ +++Y+ V+SDKFKTG+E+
Sbjct: 121 TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCSKMKVNITVEVYNQRLVSSDKFKTGKER 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
F+ KE+ S +T+DI IG +PVMVKSDLCWMK VEKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 FLDKEILSTDTRDITIGSVPVMVKSDLCWMKDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+K+L I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+W+
Sbjct: 241 SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE----FRKEWNALKHVEK 1205
FFALGV+SD+EVIDLID+ SED SILNILFASI DAD ++ FR+ NALK+V+
Sbjct: 301 WFFALGVSSDREVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
++K T FPPGESIEECIS+YLFP+LRG KQKARFLGYMVK LLQA +GRRKCD+RD FRN
Sbjct: 361 VIKKTAFPPGESIEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+ M KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRGMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+KR ER+SG+VAN+GRANPLQT++D+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKRMERMSGVVANVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL TGLVSTN L +L +L GME LVDDTSTSL+GK KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTGLVSTNILESLLPELSLCGMEKLVDDTSTSLQGKLKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP QVEIKRDE+Q EVR++ DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
+IK+ G Y FQ LD GIIEL+G EEEEDC TAWGI +L E + K K+THCELD
Sbjct: 661 NKIKAFKGGKYPFQYFLDKGIIELIGAEEEEDCSTAWGISYLFMEEKGKSAVKYTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
SFLLGLSC IIPFANHDHARRVLYQ+QKHS+QAIGF TTN
Sbjct: 721 KSFLLGLSCSIIPFANHDHARRVLYQAQKHSAQAIGFSTTN 761
>ref|XP_009347298.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Pyrus x bretschneideri]
Length = 1203
Score = 1097 bits (2838), Expect = 0.0
Identities = 535/761 (70%), Positives = 635/761 (83%), Gaps = 9/761 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKASM 2090
MGASS+AK DI MSSKGE + D+GEGFLK FC++A+
Sbjct: 1 MGASSDAKGDIGMSSKGESFTNGVDMDIDDSDYDDEYDYSTSLQDLGEGFLKNFCKEAAT 60
Query: 2089 AFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQV 1910
+FFNE GLISHQINSYNDFI+NG+Q+ F SFGE IVEPGYDPSKKG+ EWRYA +KFG+V
Sbjct: 61 SFFNEYGLISHQINSYNDFIQNGIQRVFSSFGEIIVEPGYDPSKKGDNEWRYALVKFGKV 120
Query: 1909 TLDKPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
TL +PSF+ GS D E+NMLPRHARLQNMTY +MKVN+ +++Y+ V+SDKFKTG+ +
Sbjct: 121 TLGRPSFWGGSDNDKEYNMLPRHARLQNMTYCAKMKVNITVEVYNQRLVSSDKFKTGKXR 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
F+ KE+ S +T+DI +G +PVMVKSDLCWM+ VEKGDCDFDHGGYFIIKGAEK F+AQEQ
Sbjct: 181 FLDKEILSTDTRDITVGSVPVMVKSDLCWMRDVEKGDCDFDHGGYFIIKGAEKTFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
C+K+L I+N+ G TVAY+SE KR+RLI+RLV +SK E+I+G EKVL+VYF+STEIP+W+
Sbjct: 241 SCLKKLLITNNQGLTVAYRSEVKRHRLIIRLVGISKLENIEGVEKVLTVYFMSTEIPVWV 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE----FRKEWNALKHVEK 1205
FFALGV+SDKEVIDLID+ SED SILNILFASI DAD ++ FR+ NALK+V+
Sbjct: 301 WFFALGVSSDKEVIDLIDYGSEDASILNILFASIRDADKATEKVDGGFRRGKNALKYVDD 360
Query: 1204 LVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRN 1025
++K T FPPGES+EECIS+YLFP+LRG KQKARFLGYMVK LLQA +GRRKCD+RD FRN
Sbjct: 361 VIKKTAFPPGESMEECISLYLFPNLRGLKQKARFLGYMVKSLLQASAGRRKCDNRDDFRN 420
Query: 1024 KRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFS 845
KRL+LAGELL+RELK HI HAR+RM KALQRDLYGDR VRPIE+YLDASI+TNG+SRAFS
Sbjct: 421 KRLDLAGELLERELKAHIGHARRRMAKALQRDLYGDRVVRPIEHYLDASIVTNGISRAFS 480
Query: 844 TGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKI 665
TGAW HP+K+ ER+SG+VA +GRANPLQT++D+R+TRQQV+YTGKVGDARYPHPSHWGK+
Sbjct: 481 TGAWCHPFKKMERMSGVVATVGRANPLQTMIDMRKTRQQVQYTGKVGDARYPHPSHWGKV 540
Query: 664 CFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
CFLSTPDGENCGLVKNL T +VSTN L +L +L GME LVDDTSTSL+GK+KVF+N
Sbjct: 541 CFLSTPDGENCGLVKNLATTTIVSTNILESLLPELSLCGMEKLVDDTSTSLQGKFKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
GDWVGVC DSLSFV ELR RRR++LP QVEIKRDE+Q EVR++ DAGRILRPLLVVENL
Sbjct: 601 GDWVGVCEDSLSFVSELRRMRRRKKLPPQVEIKRDEKQGEVRVYSDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELD 125
+IK+ G+ + F+ L+ GIIEL+G EEEEDC TAWGIK+L E + K K+THCELD
Sbjct: 661 NKIKALKGEKHPFKYFLNKGIIELIGAEEEEDCSTAWGIKYLFMEEKGKSTVKYTHCELD 720
Query: 124 MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
MSFLLGLSC IIPFANHDHARRVLYQ+QKHSSQAIGF TTN
Sbjct: 721 MSFLLGLSCSIIPFANHDHARRVLYQAQKHSSQAIGFSTTN 761
>gb|KHG03399.1| DNA-directed RNA polymerase D subunit 2a -like protein [Gossypium
arboreum]
Length = 1204
Score = 1097 bits (2837), Expect = 0.0
Identities = 540/762 (70%), Positives = 633/762 (83%), Gaps = 10/762 (1%)
Frame = -1
Query: 2257 MGASSNAKEDIAM-SSKGEKXXXXXXXXXXXXXXXXXXS----INDIGEGFLKIFCRKAS 2093
MGAS + K ++ M S+ GEK + ++GE FL+ FCRKA+
Sbjct: 1 MGASPDGKGNVGMGSTSGEKFANGTDLNMDIDEDDDVFDELVSVQELGEEFLRNFCRKAA 60
Query: 2092 MAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQ 1913
++FFN+ GLISHQINSYNDFIK GLQ FDSFGE ++ GYDPSKKGEG+WR+A +KFG+
Sbjct: 61 VSFFNQYGLISHQINSYNDFIKYGLQNTFDSFGEFVIHSGYDPSKKGEGDWRHARVKFGK 120
Query: 1912 VTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQ 1733
VT+++P+F+A + +E NMLPRHARLQNMTYS RMKV V+LQ+Y+ + V SDKFKTGRE+
Sbjct: 121 VTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQVYTAKSVKSDKFKTGREE 180
Query: 1732 FVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQ 1553
V++E+ + ++I+IGRIPVMVKS+LCWM VEK DCDFDHGGYF+IKGAEK+F+AQEQ
Sbjct: 181 IVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHGGYFLIKGAEKIFIAQEQ 240
Query: 1552 ICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWI 1373
I +KRLWISN GWTVAY+SE KRNRLI+RLV+ SK E IKGGEK+L+V+FLS EIP+WI
Sbjct: 241 ISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGGEKILTVFFLSIEIPVWI 300
Query: 1372 LFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFRKEWNALKHVEKLVKS 1193
LFFALGV SDKEV+ LID+ S D SI NILFASI DAD KC FR+E AL H+++L K
Sbjct: 301 LFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDADWKCRNFREESAALNHLDRLRKE 360
Query: 1192 TTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRNKRLE 1013
T FPP ES+EEC+ YLFPSL+G KQKARFLGYMVKCLLQA++G RKCD+RD FRNKRLE
Sbjct: 361 TRFPPEESVEECLGKYLFPSLKGFKQKARFLGYMVKCLLQAFTGHRKCDNRDDFRNKRLE 420
Query: 1012 LAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFSTGAW 833
LAGELL+RE+KVHIAHAR+RM K LQRDLY DRTVRPIE+YLDASI+TNGLSRAFSTGAW
Sbjct: 421 LAGELLEREMKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLDASIVTNGLSRAFSTGAW 480
Query: 832 SHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKICFLS 653
SHPYK+ ERISG+VANLGRANPLQT+VDLR+TRQQV+YTGKVGDARYPHPSHWGK+CFLS
Sbjct: 481 SHPYKKMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVGDARYPHPSHWGKVCFLS 540
Query: 652 TPDGENCGLVKNLGITGLVSTN----TLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVN 485
TPDGENCGLVKNL T LVSTN + I+D L DSGME +V+DTS+SL+GK KVF+N
Sbjct: 541 TPDGENCGLVKNLATTALVSTNIVKSVVESIVDTLFDSGMEKVVNDTSSSLDGKDKVFLN 600
Query: 484 GDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENL 305
G+WVGVC DSL F ELR KRRR+ELP QVEIKRDE + EVRIF DAGRILRPLLVVENL
Sbjct: 601 GEWVGVCEDSLFFAAELRRKRRRRELPYQVEIKRDEHKGEVRIFTDAGRILRPLLVVENL 660
Query: 304 GRIKSQIGK-SYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCEL 128
++K+ GK +Y FQ LLD GI+EL+G EEEEDC TAWGI++LL E E K+P K+THCEL
Sbjct: 661 FKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYLLTEVEGKQPVKYTHCEL 720
Query: 127 DMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
DMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 721 DMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 762
>gb|KJB07693.1| hypothetical protein B456_001G037900 [Gossypium raimondii]
Length = 1038
Score = 1090 bits (2820), Expect = 0.0
Identities = 528/719 (73%), Positives = 618/719 (85%), Gaps = 5/719 (0%)
Frame = -1
Query: 2143 INDIGEGFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDP 1964
+ ++GE FL+ FCRKA+++FFN+ GL+SHQINSYNDFIK GLQ FDSFGE ++ GYDP
Sbjct: 44 VQELGEEFLRNFCRKAAVSFFNQYGLVSHQINSYNDFIKYGLQNTFDSFGEFVIHSGYDP 103
Query: 1963 SKKGEGEWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQI 1784
SKKGEG+WR+A +KFG+VT+++P+F+A + +E NMLPRHARLQNMTYS RMKV V+LQ+
Sbjct: 104 SKKGEGDWRHARVKFGKVTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQV 163
Query: 1783 YSHERVTSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHG 1604
Y+ + V SDKFKTGRE+ V++E+ + ++I+IGRIPVMVKS+LCWM VEK DCDFDHG
Sbjct: 164 YTAKSVKSDKFKTGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHG 223
Query: 1603 GYFIIKGAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGG 1424
GYF+IKGAEK+F+AQEQI +KRLWISN GWTVAY+SE KRNRLI+RLV+ SK E IKGG
Sbjct: 224 GYFLIKGAEKIFIAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGG 283
Query: 1423 EKVLSVYFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE 1244
EK+L+V+FLS EIP+WILFFALGV SDKEV+ LID+ S D SI NILFASI DAD KC
Sbjct: 284 EKILTVFFLSIEIPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDADWKCRN 343
Query: 1243 FRKEWNALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYS 1064
FR+E AL H+++L K T FPP ES+EEC+ YLFPSL+G KQKARFLGYMVK LLQA++
Sbjct: 344 FREESAALNHLDRLRKETRFPPEESVEECLGKYLFPSLKGFKQKARFLGYMVKSLLQAFT 403
Query: 1063 GRRKCDSRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLD 884
G RKCD+RD FRNKRLELAGELL+RE+KVHIAHAR+RM K LQRDLY DRTVRPIE+YLD
Sbjct: 404 GHRKCDNRDDFRNKRLELAGELLEREMKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLD 463
Query: 883 ASIITNGLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVG 704
ASI+TNGLSRAFSTGAWSHPYK+ ERISG+VANLGRANPLQT+VDLR+TRQQV+YTGKVG
Sbjct: 464 ASIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVG 523
Query: 703 DARYPHPSHWGKICFLSTPDGENCGLVKNLGITGLVSTN----TLGPILDQLLDSGMENL 536
DARYPHPSHWGK+CFLSTPDGENCGLVKNL T LVSTN + I+D L DSGME +
Sbjct: 524 DARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSTNIVKSVVESIVDTLFDSGMEKV 583
Query: 535 VDDTSTSLEGKYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRI 356
V+DTS+SL+GK KVF+NG+WVGVC DSL F ELR KRRR+ELP QVEIKRDE + EVRI
Sbjct: 584 VNDTSSSLDGKDKVFLNGEWVGVCEDSLFFAAELRRKRRRKELPYQVEIKRDEHKGEVRI 643
Query: 355 FLDAGRILRPLLVVENLGRIKSQIGK-SYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHL 179
F DAGRILRPLLVVENL ++K+ GK +Y FQ LLD GI+EL+G EEEEDC TAWGI++L
Sbjct: 644 FTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYL 703
Query: 178 LKENEDKKPKKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
L E E K+P K+THCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 704 LTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 762
>ref|XP_012452401.1| PREDICTED: DNA-directed RNA polymerase D subunit 2b-like [Gossypium
raimondii] gi|763740193|gb|KJB07692.1| hypothetical
protein B456_001G037900 [Gossypium raimondii]
Length = 1204
Score = 1090 bits (2820), Expect = 0.0
Identities = 528/719 (73%), Positives = 618/719 (85%), Gaps = 5/719 (0%)
Frame = -1
Query: 2143 INDIGEGFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDP 1964
+ ++GE FL+ FCRKA+++FFN+ GL+SHQINSYNDFIK GLQ FDSFGE ++ GYDP
Sbjct: 44 VQELGEEFLRNFCRKAAVSFFNQYGLVSHQINSYNDFIKYGLQNTFDSFGEFVIHSGYDP 103
Query: 1963 SKKGEGEWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQI 1784
SKKGEG+WR+A +KFG+VT+++P+F+A + +E NMLPRHARLQNMTYS RMKV V+LQ+
Sbjct: 104 SKKGEGDWRHARVKFGKVTVERPTFWAVTGGNELNMLPRHARLQNMTYSSRMKVTVELQV 163
Query: 1783 YSHERVTSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHG 1604
Y+ + V SDKFKTGRE+ V++E+ + ++I+IGRIPVMVKS+LCWM VEK DCDFDHG
Sbjct: 164 YTAKSVKSDKFKTGREEIVEEEIVHQDNREIIIGRIPVMVKSELCWMNEVEKSDCDFDHG 223
Query: 1603 GYFIIKGAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGG 1424
GYF+IKGAEK+F+AQEQI +KRLWISN GWTVAY+SE KRNRLI+RLV+ SK E IKGG
Sbjct: 224 GYFLIKGAEKIFIAQEQISLKRLWISNIQGWTVAYRSEVKRNRLIIRLVENSKVEYIKGG 283
Query: 1423 EKVLSVYFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE 1244
EK+L+V+FLS EIP+WILFFALGV SDKEV+ LID+ S D SI NILFASI DAD KC
Sbjct: 284 EKILTVFFLSIEIPVWILFFALGVRSDKEVVSLIDYGSSDSSISNILFASIRDADWKCRN 343
Query: 1243 FRKEWNALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYS 1064
FR+E AL H+++L K T FPP ES+EEC+ YLFPSL+G KQKARFLGYMVK LLQA++
Sbjct: 344 FREESAALNHLDRLRKETRFPPEESVEECLGKYLFPSLKGFKQKARFLGYMVKSLLQAFT 403
Query: 1063 GRRKCDSRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLD 884
G RKCD+RD FRNKRLELAGELL+RE+KVHIAHAR+RM K LQRDLY DRTVRPIE+YLD
Sbjct: 404 GHRKCDNRDDFRNKRLELAGELLEREMKVHIAHARRRMAKTLQRDLYADRTVRPIEHYLD 463
Query: 883 ASIITNGLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVG 704
ASI+TNGLSRAFSTGAWSHPYK+ ERISG+VANLGRANPLQT+VDLR+TRQQV+YTGKVG
Sbjct: 464 ASIVTNGLSRAFSTGAWSHPYKKMERISGVVANLGRANPLQTMVDLRKTRQQVQYTGKVG 523
Query: 703 DARYPHPSHWGKICFLSTPDGENCGLVKNLGITGLVSTN----TLGPILDQLLDSGMENL 536
DARYPHPSHWGK+CFLSTPDGENCGLVKNL T LVSTN + I+D L DSGME +
Sbjct: 524 DARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSTNIVKSVVESIVDTLFDSGMEKV 583
Query: 535 VDDTSTSLEGKYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRI 356
V+DTS+SL+GK KVF+NG+WVGVC DSL F ELR KRRR+ELP QVEIKRDE + EVRI
Sbjct: 584 VNDTSSSLDGKDKVFLNGEWVGVCEDSLFFAAELRRKRRRKELPYQVEIKRDEHKGEVRI 643
Query: 355 FLDAGRILRPLLVVENLGRIKSQIGK-SYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHL 179
F DAGRILRPLLVVENL ++K+ GK +Y FQ LLD GI+EL+G EEEEDC TAWGI++L
Sbjct: 644 FTDAGRILRPLLVVENLFKLKAFKGKENYAFQPLLDKGIVELIGAEEEEDCRTAWGIRYL 703
Query: 178 LKENEDKKPKKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
L E E K+P K+THCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 704 LTEVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 762
>ref|XP_011036682.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Populus euphratica]
Length = 1190
Score = 1089 bits (2817), Expect = 0.0
Identities = 533/753 (70%), Positives = 618/753 (82%), Gaps = 1/753 (0%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXSINDIGEGFLKIFCRKASMAFFN 2078
MGASS+ ED+ SSK ++N++G+ L+ FC+KA+ FF
Sbjct: 1 MGASSDYMEDVGPSSK-----VAVDDMDMDGDLMDTANLNELGKETLQSFCKKAASLFFE 55
Query: 2077 ENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQVTLDK 1898
E GLISHQINSYN FI +GLQ+ FDSFGE VEPGYD SK+ +GEW+ AS++ G+VTLD+
Sbjct: 56 EYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDSSKQKDGEWKRASVRLGKVTLDR 115
Query: 1897 PSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQFVQK 1721
PSF+ G+ D EHNM PRHARLQNMTYS RMK++ +Q+Y+ SDKFKTG ++ VQK
Sbjct: 116 PSFWGGTSSDAEHNMFPRHARLQNMTYSARMKIHANVQVYTQSVGRSDKFKTGIDKVVQK 175
Query: 1720 EVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICMK 1541
V E ++I+IGRIPVMVKSDLCW+ VEKGDCDFDHGGYF+IKGAEKVF+AQEQICMK
Sbjct: 176 NVVHTENREIIIGRIPVMVKSDLCWLTAVEKGDCDFDHGGYFLIKGAEKVFIAQEQICMK 235
Query: 1540 RLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFFA 1361
RLWISNS GWTV+YKSE KRNRLIVRLV++SK E IKG +K L VYFLSTEIP+WILFFA
Sbjct: 236 RLWISNSQGWTVSYKSEVKRNRLIVRLVELSKLEYIKGEKKGLCVYFLSTEIPLWILFFA 295
Query: 1360 LGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFRKEWNALKHVEKLVKSTTFP 1181
LGV SDKEVIDLID+ S D SI+NI FASIHDAD+KC+ FR+E AL +V+KL+K T FP
Sbjct: 296 LGVRSDKEVIDLIDYASNDASIVNIFFASIHDADEKCEHFRREDRALDYVDKLLKKTRFP 355
Query: 1180 PGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRNKRLELAGE 1001
P ESIE+ IS YLFP L KARFLGYMVKCLL+AY+G RKCD+RD FRNKR ELA E
Sbjct: 356 PKESIEDAISAYLFPRLNSRGHKARFLGYMVKCLLEAYTGHRKCDNRDSFRNKRFELASE 415
Query: 1000 LLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFSTGAWSHPY 821
LL+RELKVH++HA +RMTKALQRDLYGDR V PIE+YLDASI+TNGL+RAFSTGAW HP+
Sbjct: 416 LLERELKVHVSHALRRMTKALQRDLYGDRDVHPIEHYLDASIVTNGLTRAFSTGAWCHPF 475
Query: 820 KRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKICFLSTPDG 641
K ER+SG+V NLGRANPLQT++DLR+TRQQV YTGKVGDARYPHPSHWG++CFLSTPDG
Sbjct: 476 KWMERVSGVVGNLGRANPLQTMIDLRKTRQQVLYTGKVGDARYPHPSHWGRVCFLSTPDG 535
Query: 640 ENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVNGDWVGVCL 461
ENCGLVKNL +TG+VSTN ++D+L SGME LVDDT T L+GK+KVF+NG+WVGVC
Sbjct: 536 ENCGLVKNLAVTGVVSTNISESLVDKLFGSGMEKLVDDTYTKLDGKHKVFLNGEWVGVCE 595
Query: 460 DSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENLGRIKSQIG 281
DS FV ELRS RRR+ELP QVEIKRDE+Q EVRIF DAGRILRPLLVVENL +IK+ G
Sbjct: 596 DSCLFVGELRSMRRRRELPYQVEIKRDEQQREVRIFSDAGRILRPLLVVENLDKIKAFKG 655
Query: 280 KSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELDMSFLLGLS 101
+Y F SLLD GIIE +GTEEEEDCCTAWGIK LL + E K+P K+THCELDMSFLLGLS
Sbjct: 656 GNYIFTSLLDKGIIEFIGTEEEEDCCTAWGIKFLLADIEGKQPMKYTHCELDMSFLLGLS 715
Query: 100 CGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
CGIIPFANHDHARRVLYQ+QKHS QAIGF TTN
Sbjct: 716 CGIIPFANHDHARRVLYQAQKHSQQAIGFSTTN 748
>ref|XP_008452849.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
[Cucumis melo]
Length = 1197
Score = 1075 bits (2779), Expect = 0.0
Identities = 522/756 (69%), Positives = 625/756 (82%), Gaps = 7/756 (0%)
Frame = -1
Query: 2248 SSNAKEDIAMSSKGE--KXXXXXXXXXXXXXXXXXXSINDIGEGFLKIFCRKASMAFFNE 2075
+S K+DI M+S+GE +IND+GE FLK FC+K+SMAFFN+
Sbjct: 3 TSGTKDDIEMNSEGEDLSPGMDLDTDDDDDYYSEPVNINDLGEAFLKDFCKKSSMAFFNQ 62
Query: 2074 NGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQVTLDKP 1895
GLISHQINSYNDFIKNG+Q+AFD FG+ +V+PGYDPSKKG+GEWRYAS+KFG+VTLDKP
Sbjct: 63 YGLISHQINSYNDFIKNGVQKAFDFFGDILVQPGYDPSKKGDGEWRYASVKFGKVTLDKP 122
Query: 1894 SFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQFVQKE 1718
F+ G+ E+NMLPRHARLQNMTYS RMK+N+ L+IY+ + V+SDKFKTG++Q+V KE
Sbjct: 123 KFWGGAASGKEYNMLPRHARLQNMTYSSRMKINISLEIYTQKLVSSDKFKTGKDQYVDKE 182
Query: 1717 V--HSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICM 1544
+ + +D+ IGR+PVMV SDLCWMK +K DC+FD GGYF+IKGAEK+F+AQEQIC+
Sbjct: 183 PVEGASDNRDVFIGRLPVMVNSDLCWMKDEQKRDCEFDRGGYFLIKGAEKIFIAQEQICL 242
Query: 1543 KRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFF 1364
+RLWISN GWTVAY+SE KRNRLI+RLV+ SK ED+K EKVL+VYFLSTE+P+WILFF
Sbjct: 243 RRLWISNVQGWTVAYRSEVKRNRLIIRLVENSKSEDLKSKEKVLNVYFLSTEVPVWILFF 302
Query: 1363 ALGVNSDKEVIDLIDFTSEDRSILNILFASIH--DADDKCDEFRKEWNALKHVEKLVKST 1190
ALGV+SDKE++DLID+ +D ++LNILFAS+ D DDK +FR+ AL ++ ++ T
Sbjct: 303 ALGVSSDKEIVDLIDYGRDDPTVLNILFASVREVDNDDKWKDFRRGKRALTFLDNEIRKT 362
Query: 1189 TFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRNKRLEL 1010
+FPP E IE+C+++YLF SL+G KQK FLGYMVKCLLQAY+GRRKCD+RD FRNKR EL
Sbjct: 363 SFPPAEKIEDCLNLYLFASLKGLKQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFEL 422
Query: 1009 AGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFSTGAWS 830
A ELL+RELKVHIAHAR+RM KALQRDLYGDR VRPIE+YLDASIITNGLSRAFSTGAW+
Sbjct: 423 AAELLERELKVHIAHARRRMEKALQRDLYGDRQVRPIEHYLDASIITNGLSRAFSTGAWA 482
Query: 829 HPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKICFLST 650
H +KR ERISG+VA LGRANPLQT+ +LRRTRQQV YTGKVGDARYPHPSHWG++CFLST
Sbjct: 483 HAFKRMERISGVVATLGRANPLQTMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLST 542
Query: 649 PDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVNGDWVG 470
PDGENCGL+KNL TGLVS NT PI+ L GMENL D+TSTSL GKY++F++G+WVG
Sbjct: 543 PDGENCGLIKNLSGTGLVSLNTTKPIIPTLFCCGMENLADNTSTSLCGKYRIFLDGEWVG 602
Query: 469 VCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENLGRIKS 290
VC DSLSFV ++R KRRR +QVE+KRDE+ EVRIF DAGRILRPLLVVENL RI
Sbjct: 603 VCEDSLSFVTKVRRKRRRNPFLHQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDK 662
Query: 289 QIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELDMSFLL 110
G++YTFQSLLD GIIELVGTEEEEDC AW IKHL+ ED+ K++HCELDMSFLL
Sbjct: 663 SKGENYTFQSLLDKGIIELVGTEEEEDCRVAWSIKHLM---EDEGTTKYSHCELDMSFLL 719
Query: 109 GLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
GLSCG++PFANHDHARR L+QSQKHS+QAIGF TTN
Sbjct: 720 GLSCGLVPFANHDHARRALFQSQKHSNQAIGFSTTN 755
>ref|XP_010101029.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
gi|587898230|gb|EXB86677.1| DNA-directed RNA polymerase D
subunit 2a [Morus notabilis]
Length = 1196
Score = 1072 bits (2772), Expect = 0.0
Identities = 528/754 (70%), Positives = 620/754 (82%), Gaps = 2/754 (0%)
Frame = -1
Query: 2257 MGASSNAKEDIAMSSKGEKXXXXXXXXXXXXXXXXXXS-INDIGEGFLKIFCRKASMAFF 2081
MGASS+AKED+AMSSKGEK + I ++GE FL+ FC++AS +FF
Sbjct: 1 MGASSDAKEDVAMSSKGEKFSGSVDMDIDDEEEFNELTSIKELGEVFLQNFCKEASTSFF 60
Query: 2080 NENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDPSKKGEGEWRYASMKFGQVTLD 1901
+E GLISHQINSYNDFI+NG+Q+ FDSFG+ IVEPGYDPSKK + EWRYA ++FG+VTLD
Sbjct: 61 SEYGLISHQINSYNDFIRNGVQKVFDSFGDLIVEPGYDPSKKRQNEWRYALVRFGKVTLD 120
Query: 1900 KPSFFAGSKED-EHNMLPRHARLQNMTYSCRMKVNVQLQIYSHERVTSDKFKTGREQFVQ 1724
PSF+ G+ +D E+N+LPRHARLQNMTYS RMKVNV +++Y+ + V SDKFKTG+EQF+
Sbjct: 121 LPSFWGGADKDKEYNLLPRHARLQNMTYSSRMKVNVHIEVYTQKLVRSDKFKTGKEQFLD 180
Query: 1723 KEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQICM 1544
KE+ S E KD++IGRIPVMVKSDLCWMK EKGDC FDHGGYFIIKGAEK F+AQEQIC
Sbjct: 181 KEIISTEDKDVMIGRIPVMVKSDLCWMKDAEKGDCYFDHGGYFIIKGAEKTFIAQEQICR 240
Query: 1543 KRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGGEKVLSVYFLSTEIPIWILFF 1364
KRLWI++ TVAY+SE KRNRLI+RL S ED + VL VYFLSTEIP+WILFF
Sbjct: 241 KRLWITSHQNLTVAYQSEVKRNRLILRLAQ-SGLEDTTVEKDVLCVYFLSTEIPVWILFF 299
Query: 1363 ALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDEFRKEWNALKHVEKLVKSTTF 1184
ALGV+SDKEV+DLIDF ++D SILNILF SI +D+ C FR++ AL VEK +K T F
Sbjct: 300 ALGVSSDKEVVDLIDFPTDDASILNILFPSIQISDEVCAGFRRQKKALGFVEKHIKKTQF 359
Query: 1183 PPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYSGRRKCDSRDHFRNKRLELAG 1004
PP ES EEC+ M+LFP+LRG QKARFLGYMVKCLLQA++GRRKC+++D FRNKRL+LAG
Sbjct: 360 PPRESAEECLDMFLFPNLRGMLQKARFLGYMVKCLLQAFTGRRKCNNKDDFRNKRLDLAG 419
Query: 1003 ELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLDASIITNGLSRAFSTGAWSHP 824
ELL+REL+ ++HARKR KALQRDLYGD+ +R IE+YLDASI+TNGLSRAFSTGAW HP
Sbjct: 420 ELLERELRAQVSHARKRTAKALQRDLYGDKGLRQIEFYLDASIVTNGLSRAFSTGAWCHP 479
Query: 823 YKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVGDARYPHPSHWGKICFLSTPD 644
+K++ERISG+VAN+GR NPLQT+VD+R+TRQQV+YTGKVGDARYPHPSHWGK+CFLSTPD
Sbjct: 480 FKKTERISGVVANVGRTNPLQTVVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPD 539
Query: 643 GENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDTSTSLEGKYKVFVNGDWVGVC 464
GENCGLVKNL TGLVS N ++ L DSGMENL +DT T L K+KVF+NGDW+GVC
Sbjct: 540 GENCGLVKNLAATGLVSINIAESLISTLCDSGMENLANDTYTPLHEKHKVFLNGDWIGVC 599
Query: 463 LDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDAGRILRPLLVVENLGRIKSQI 284
DSL+FV ELR KRRR ELP+QVEIKRDE+ EVRIF D+GRILRPLLVVENL RIK
Sbjct: 600 ADSLAFVTELRRKRRRNELPHQVEIKRDEQHGEVRIFSDSGRILRPLLVVENLNRIKPSK 659
Query: 283 GKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENEDKKPKKFTHCELDMSFLLGL 104
YTF SLLD GIIEL+G EEEEDC TAWGIK+L E + KP +THCELDMSFLL +
Sbjct: 660 EGKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLFME-DGGKPVNYTHCELDMSFLLSV 718
Query: 103 SCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
SCGIIPFANHDHARRVLYQ+QKHS QAIGFPTTN
Sbjct: 719 SCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTN 752
>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
subunit, putative [Ricinus communis]
Length = 1203
Score = 1068 bits (2761), Expect = 0.0
Identities = 518/714 (72%), Positives = 607/714 (85%)
Frame = -1
Query: 2143 INDIGEGFLKIFCRKASMAFFNENGLISHQINSYNDFIKNGLQQAFDSFGETIVEPGYDP 1964
+ DIGE LK FC KA+ FFNE GLISHQINSYNDFI NG+Q+AFDSFGE +VEPGYDP
Sbjct: 51 LTDIGEAKLKDFCNKAATLFFNEYGLISHQINSYNDFINNGIQKAFDSFGELVVEPGYDP 110
Query: 1963 SKKGEGEWRYASMKFGQVTLDKPSFFAGSKEDEHNMLPRHARLQNMTYSCRMKVNVQLQI 1784
SKKGE EWRYAS+KFG+V L+KP+F++G+ DEH MLPRHARLQNMTYS +MKVNV +++
Sbjct: 111 SKKGENEWRYASVKFGKVALEKPTFWSGA--DEHKMLPRHARLQNMTYSSKMKVNVSVEV 168
Query: 1783 YSHERVTSDKFKTGREQFVQKEVHSDETKDIVIGRIPVMVKSDLCWMKGVEKGDCDFDHG 1604
Y+ + V SDKFKTG++Q+V KEV + + ++I IG +PVMVKSDLCWMK EKGDCDFDHG
Sbjct: 169 YTRKVVRSDKFKTGKDQYVDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHG 228
Query: 1603 GYFIIKGAEKVFVAQEQICMKRLWISNSMGWTVAYKSENKRNRLIVRLVDMSKFEDIKGG 1424
GYF+IKGAEKVF+AQEQIC+KRLWISN GWTV+YKSE KRNRLIVRLV +S ED+K
Sbjct: 229 GYFLIKGAEKVFIAQEQICLKRLWISNIQGWTVSYKSEIKRNRLIVRLVGLSALEDVKAE 288
Query: 1423 EKVLSVYFLSTEIPIWILFFALGVNSDKEVIDLIDFTSEDRSILNILFASIHDADDKCDE 1244
+K L+VYFLSTEIP+WILFFALGV SDKEVIDLI + S D I+NI FASIHDAD+K +
Sbjct: 289 KKCLTVYFLSTEIPLWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEG 348
Query: 1243 FRKEWNALKHVEKLVKSTTFPPGESIEECISMYLFPSLRGSKQKARFLGYMVKCLLQAYS 1064
FR+ AL++V + ++ T FPPGE+ E+ +YLFP+L +QKARFLGYMVKCLLQAY+
Sbjct: 349 FRRGKEALEYVVRQIRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYN 407
Query: 1063 GRRKCDSRDHFRNKRLELAGELLDRELKVHIAHARKRMTKALQRDLYGDRTVRPIEYYLD 884
G+RKC++ D FRNKR ELA ELL+RELKVHIAHAR+RM KALQ+DLYGDR VRPIE+YLD
Sbjct: 408 GQRKCNNWDSFRNKRFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLD 467
Query: 883 ASIITNGLSRAFSTGAWSHPYKRSERISGIVANLGRANPLQTLVDLRRTRQQVRYTGKVG 704
ASI+TNGLSRAFSTGAWSHPYKR ERISG+VANLGRANPLQT+VDLR+TR V+YTGKVG
Sbjct: 468 ASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVG 527
Query: 703 DARYPHPSHWGKICFLSTPDGENCGLVKNLGITGLVSTNTLGPILDQLLDSGMENLVDDT 524
DAR+PHPSHWG++CFLSTPDGENCGLVKNL TGLVS N L P++D+L+ GME + +D+
Sbjct: 528 DARFPHPSHWGRVCFLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPEDS 587
Query: 523 STSLEGKYKVFVNGDWVGVCLDSLSFVDELRSKRRRQELPNQVEIKRDEEQCEVRIFLDA 344
+ L+ K KVF+NG+WVGVC DS FV ELR RRR++LP QVEIKRDE+Q EVRIF DA
Sbjct: 588 HSDLDEKDKVFLNGEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDA 647
Query: 343 GRILRPLLVVENLGRIKSQIGKSYTFQSLLDNGIIELVGTEEEEDCCTAWGIKHLLKENE 164
GRILRPLLVV+NL +I++ G + TFQSLLD GIIE VGTEEEEDC TAWGIK LL +
Sbjct: 648 GRILRPLLVVQNLHKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVD 707
Query: 163 DKKPKKFTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTN 2
K+ K+THCELDMSFLLGLSCGIIPFANHDHARRVLYQ+QKHS QAIGFPTTN
Sbjct: 708 GKQSLKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTN 761