BLASTX nr result
ID: Zanthoxylum22_contig00008894
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00008894
(400 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 169 1e-39
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 164 2e-38
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 161 2e-37
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|1337118... 160 3e-37
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 159 8e-37
ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892... 157 2e-36
emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana] 157 3e-36
gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thal... 156 5e-36
emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group] 156 7e-36
ref|XP_013653992.1| PREDICTED: uncharacterized protein LOC106358... 155 9e-36
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 155 9e-36
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 155 9e-36
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 155 9e-36
pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrot... 155 9e-36
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 155 1e-35
gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group... 155 1e-35
emb|CAA31653.1| polyprotein [Arabidopsis thaliana] 154 2e-35
gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Ar... 154 2e-35
gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidop... 154 2e-35
pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis t... 154 3e-35
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 169 bits (427), Expect = 1e-39
Identities = 79/132 (59%), Positives = 105/132 (79%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K QTW LVP P+ K V+CKWLFK+K+G+ +P ++K+RLVAKGF+Q+E + YNE+
Sbjct: 939 SLRKNQTWELVPLPEGVKPVDCKWLFKIKDGISXDEPPKYKSRLVAKGFSQKEGIDYNEV 998
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK K+IR++LA+V+ +NLEL+ LDVKTAFLHG LE++IY+ Q GFVD ++VC
Sbjct: 999 FSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQPEGFVDSEKSDHVC 1058
Query: 40 LLNKSLHGLKQS 5
L KSL+GLKQS
Sbjct: 1059 FLKKSLYGLKQS 1070
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 164 bits (416), Expect = 2e-38
Identities = 79/132 (59%), Positives = 105/132 (79%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL + QTWTL+P P N++L+ CKW+FK EG+ +P ++KARLVA+GFTQRE V +NEI
Sbjct: 839 SLQRNQTWTLIPNPGNKRLINCKWIFKRNEGIPDVEPPKYKARLVARGFTQREGVDFNEI 898
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR++LA+VA +LELE +DVKTAFLHG LE++I ++Q GF K+ +YVC
Sbjct: 899 FSPVVKHSSIRILLAMVALLDLELEQMDVKTAFLHGNLEEQILMAQPEGFECKDKEDYVC 958
Query: 40 LLNKSLHGLKQS 5
LL+KSL+GLKQS
Sbjct: 959 LLHKSLYGLKQS 970
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 161 bits (407), Expect = 2e-37
Identities = 77/132 (58%), Positives = 101/132 (76%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K W LVPKPK +KLV CKW+F+ KEG+ D + +KARLVAKG++Q+E V Y+EI
Sbjct: 807 SLHKNSVWELVPKPKERKLVGCKWVFRKKEGIHEDDAITYKARLVAKGYSQKEGVDYDEI 866
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR++L++ AQY++E+E +DVKTAFLHG+LE+ IY+SQ GFV+ VC
Sbjct: 867 FSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQPEGFVETGKENLVC 926
Query: 40 LLNKSLHGLKQS 5
L KSL+GLKQS
Sbjct: 927 RLKKSLYGLKQS 938
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] gi|133711819|gb|ABO36636.1|
copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 160 bits (406), Expect = 3e-37
Identities = 79/132 (59%), Positives = 102/132 (77%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K QTW LV +P +K++ CKW+FK KEG+ P++ V++KAR+VA+GF QRE V YNEI
Sbjct: 816 SLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEI 875
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VV+ +IR++LA+VA NLELE LDVKTAFLHGELE++IY++Q GF +VC
Sbjct: 876 FSPVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMTQPDGFQVPGKENHVC 935
Query: 40 LLNKSLHGLKQS 5
L KSL+GLKQS
Sbjct: 936 KLKKSLYGLKQS 947
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 159 bits (402), Expect = 8e-37
Identities = 80/132 (60%), Positives = 98/132 (74%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV PK +K V CKW+FK KEGL PS+P RFKARLVAKGF+Q V YN++
Sbjct: 831 SLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIVGVDYNDV 890
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR ++VA ++LELE LDVKTAFLHGELE++IY+ Q GF+ +YVC
Sbjct: 891 FSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEDYVC 950
Query: 40 LLNKSLHGLKQS 5
L +SL+GLKQS
Sbjct: 951 KLKRSLYGLKQS 962
>ref|XP_010676254.1| PREDICTED: uncharacterized protein LOC104892119 [Beta vulgaris subsp.
vulgaris]
Length = 1947
Score = 157 bits (398), Expect = 2e-36
Identities = 81/132 (61%), Positives = 100/132 (75%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K QTW LV P+ +K+V CKW+FK KEG + VR+KARLVAKGF+QRE V YNEI
Sbjct: 929 SLHKNQTWELVRIPQGRKVVGCKWVFKRKEGTSEGESVRYKARLVAKGFSQREGVDYNEI 988
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VV+ +IR++LA+VA ++LELE LDVKTAFLHGELE+ I +SQ GFV ++ C
Sbjct: 989 FSPVVRHTSIRVLLAMVAHFDLELEQLDVKTAFLHGELEEDILMSQPEGFVVPGKEKFAC 1048
Query: 40 LLNKSLHGLKQS 5
L KSL+GLKQS
Sbjct: 1049 SLKKSLYGLKQS 1060
>emb|CAA37920.1| unnamed protein product [Arabidopsis thaliana]
Length = 494
Score = 157 bits (397), Expect = 3e-36
Identities = 75/132 (56%), Positives = 102/132 (77%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV KPK++K++ C+WLFK+K G+ +PVR+KARLVAKG+TQRE V Y EI
Sbjct: 96 SLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYTQREGVDYQEI 155
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
F+ V K +IR+++++V +LELE +DVKTAFLHGELE+++Y+ Q GF+ ++ VC
Sbjct: 156 FAPVAKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPDGFISEDGENKVC 215
Query: 40 LLNKSLHGLKQS 5
LL KSL+GLKQS
Sbjct: 216 LLKKSLYGLKQS 227
>gb|AAK38381.1|AC079028_5 polyprotein, putative [Arabidopsis thaliana]
Length = 855
Score = 156 bits (395), Expect = 5e-36
Identities = 75/132 (56%), Positives = 101/132 (76%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV KP N+K++ C+WLFK+K G+ +PVRFKARLVAKG+TQRE V Y EI
Sbjct: 542 SLIKNGTWDLVDKPTNRKIIGCRWLFKLKSGIPGVEPVRFKARLVAKGYTQREGVDYQEI 601
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
F+ VVK +IR+++++V ++ELE +DVKTAFLHG+LE+++Y+ Q GF+ + VC
Sbjct: 602 FAPVVKHTSIRVLMSVVVDQDMELEQMDVKTAFLHGDLEEELYMEQPEGFITDKTKDKVC 661
Query: 40 LLNKSLHGLKQS 5
LL KSL+GLKQS
Sbjct: 662 LLKKSLYGLKQS 673
>emb|CAE03834.3| OSJNBb0013J13.11 [Oryza sativa Japonica Group]
Length = 576
Score = 156 bits (394), Expect = 7e-36
Identities = 79/132 (59%), Positives = 96/132 (72%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV PK +K V CKW+FK KEGL PS+P RFKARLVAKGF+Q V YN++
Sbjct: 164 SLEKNGTWKLVHLPKQKKPVHCKWIFKRKEGLSPSEPPRFKARLVAKGFSQIAGVDYNDV 223
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR ++VA +LEL+ LDVKT FLHGELED+IY+ Q GF+ +YVC
Sbjct: 224 FSPVVKHSSIRTFFSIVAMDDLELKQLDVKTTFLHGELEDEIYMDQPEGFIVPGKEDYVC 283
Query: 40 LLNKSLHGLKQS 5
L +SL+GLKQS
Sbjct: 284 KLKRSLYGLKQS 295
>ref|XP_013653992.1| PREDICTED: uncharacterized protein LOC106358726 [Brassica napus]
Length = 461
Score = 155 bits (393), Expect = 9e-36
Identities = 76/132 (57%), Positives = 102/132 (77%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
S K TW LV P +K+V CKW++K+KEG P + V++K+R+VA+GF+QRE V YNEI
Sbjct: 269 SHEKNHTWDLVTLPPGRKVVTCKWIYKLKEGQSPEEGVKYKSRVVARGFSQREGVDYNEI 328
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VV+ +IRM+LA+VA+ +LELE LDVKTAFLHGELE++IY++Q GF+ ++VC
Sbjct: 329 FSPVVRHTSIRMLLAIVARQDLELEQLDVKTAFLHGELEEEIYMTQPEGFLFPGKEDHVC 388
Query: 40 LLNKSLHGLKQS 5
L KSL+GLKQS
Sbjct: 389 KLRKSLYGLKQS 400
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 155 bits (393), Expect = 9e-36
Identities = 75/132 (56%), Positives = 98/132 (74%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW +VP PK +K + CKW+FK KEGL S+P ++KARLVA+G++Q V YN++
Sbjct: 842 SLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDV 901
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR L++VA ++LELE LDVKTAFLHGELE+ IY+ Q GF+ +YVC
Sbjct: 902 FSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVC 961
Query: 40 LLNKSLHGLKQS 5
L +SL+GLKQS
Sbjct: 962 KLKRSLYGLKQS 973
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 155 bits (393), Expect = 9e-36
Identities = 75/132 (56%), Positives = 98/132 (74%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW +VP PK +K + CKW+FK KEGL S+P ++KARLVA+G++Q V YN++
Sbjct: 842 SLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDV 901
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR L++VA ++LELE LDVKTAFLHGELE+ IY+ Q GF+ +YVC
Sbjct: 902 FSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVC 961
Query: 40 LLNKSLHGLKQS 5
L +SL+GLKQS
Sbjct: 962 KLKRSLYGLKQS 973
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 155 bits (393), Expect = 9e-36
Identities = 75/132 (56%), Positives = 98/132 (74%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW +VP PK +K + CKW+FK KEGL S+P ++KARLVA+G++Q V YN++
Sbjct: 842 SLEKNSTWEVVPLPKKKKTISCKWIFKRKEGLSSSEPPKYKARLVARGYSQIPGVDYNDV 901
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR L++VA ++LELE LDVKTAFLHGELE+ IY+ Q GF+ +YVC
Sbjct: 902 FSPVVKHSSIRTFLSIVASHDLELEQLDVKTAFLHGELEEDIYMDQPEGFIVPGKEKYVC 961
Query: 40 LLNKSLHGLKQS 5
L +SL+GLKQS
Sbjct: 962 KLKRSLYGLKQS 973
>pir||S23319 hypothetical protein 2 - Arabidopsis thaliana retrotransposon Ta1-2
(strain Landsberg) (fragment) gi|16384|emb|CAA37924.1|
unnamed protein product [Arabidopsis thaliana]
Length = 1084
Score = 155 bits (393), Expect = 9e-36
Identities = 74/132 (56%), Positives = 101/132 (76%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV KPK++K++ C+WLFK+K G+ +PVR+KARLVAKG+TQRE V Y EI
Sbjct: 771 SLIKNGTWVLVDKPKDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYTQREGVDYQEI 830
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
F+ V K +IR+++++V +LELE +DVKT FLHGELE+++Y+ Q GF+ ++ VC
Sbjct: 831 FAPVAKHTSIRILMSVVVDQDLELEQMDVKTTFLHGELEEELYMEQPDGFISEDGENKVC 890
Query: 40 LLNKSLHGLKQS 5
LL KSL+GLKQS
Sbjct: 891 LLKKSLYGLKQS 902
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 155 bits (392), Expect = 1e-35
Identities = 78/132 (59%), Positives = 96/132 (72%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV PK +K V CKW+FK KEGL PS+P RFKA+LVAKGF+Q V YN++
Sbjct: 515 SLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKAKLVAKGFSQIAGVDYNDV 574
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR ++VA ++LELE LDVKTAFLHGELE++IY+ Q GF+ YVC
Sbjct: 575 FSPVVKHSSIRTFFSIVAMHDLELEQLDVKTAFLHGELEEEIYMDQPEGFIVPGKEGYVC 634
Query: 40 LLNKSLHGLKQS 5
L +S +GLKQS
Sbjct: 635 KLKRSFYGLKQS 646
>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
gi|53370655|gb|AAU89150.1| integrase core domain
containing protein [Oryza sativa Japonica Group]
gi|108710286|gb|ABF98081.1| retrotransposon protein,
putative, Ty1-copia subclass [Oryza sativa Japonica
Group]
Length = 1322
Score = 155 bits (391), Expect = 1e-35
Identities = 77/132 (58%), Positives = 95/132 (71%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV PK +K V CKW+FK KEGL PS+P RFK RLVAKGF+Q V YN++
Sbjct: 831 SLEKNGTWELVHLPKQKKPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGFSQIAGVDYNDV 890
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FS VVK +IR ++V ++LELE LDVKT FLHGELE++IY+ Q GF+ +YVC
Sbjct: 891 FSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQPEGFIVPGKEDYVC 950
Query: 40 LLNKSLHGLKQS 5
L +SL+GLKQS
Sbjct: 951 KLKRSLYGLKQS 962
>emb|CAA31653.1| polyprotein [Arabidopsis thaliana]
Length = 1291
Score = 154 bits (389), Expect = 2e-35
Identities = 74/132 (56%), Positives = 101/132 (76%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV KP+N+K++ C+WLFK+K G +PVR+KA+LVAKG+T RE V Y EI
Sbjct: 871 SLIKNGTWVLVDKPQNRKIIGCRWLFKLKSGSPGVEPVRYKAQLVAKGYTHREGVDYQEI 930
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
F+LVVK +IR+++++V +LELE +DVKTAFLHGELE+++Y+ Q G + ++ VC
Sbjct: 931 FALVVKHTSIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGCISEDGENKVC 990
Query: 40 LLNKSLHGLKQS 5
LL KSL+GLKQS
Sbjct: 991 LLKKSLYGLKQS 1002
>gb|AAF19226.1|AC007505_2 Highly similar to Ta1-3 polyprotein [Arabidopsis thaliana]
Length = 1356
Score = 154 bits (389), Expect = 2e-35
Identities = 75/132 (56%), Positives = 99/132 (75%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV KPK++K++ C+WLFK+K G+ +P RFKARLVAKG+TQRE V Y EI
Sbjct: 864 SLMKNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEI 923
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
F+ VVK +IR++++LV +LELE +DVKT FLHG+LE+++Y+ Q GFV + VC
Sbjct: 924 FAPVVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVC 983
Query: 40 LLNKSLHGLKQS 5
L KSL+GLKQS
Sbjct: 984 RLKKSLYGLKQS 995
>gb|AAD17414.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1166
Score = 154 bits (389), Expect = 2e-35
Identities = 74/132 (56%), Positives = 99/132 (75%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
S K TW L+ KP+ QKL+ CKW+FK+K G+ + R+KARLVAKGF+Q+E + YNE+
Sbjct: 758 SHKKSHTWDLIEKPEKQKLIGCKWIFKLKPGIPGVEKQRYKARLVAKGFSQQEGIDYNEV 817
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
FSLVVK +IR+ML+L+ + ELE +DVKTAFLHG LE++I +SQ GF+ + + VC
Sbjct: 818 FSLVVKHVSIRLMLSLMVNMDYELEQMDVKTAFLHGNLEERILMSQPEGFIQEGNENKVC 877
Query: 40 LLNKSLHGLKQS 5
LL KSL+GLKQS
Sbjct: 878 LLRKSLYGLKQS 889
>pir||S23312 retrovirus-related polyprotein KAS-1 - Arabidopsis thaliana
retrotransposon Ta1 (fragment) gi|16356|emb|CAA37917.1|
reverse transcriptase [Arabidopsis thaliana]
Length = 587
Score = 154 bits (388), Expect = 3e-35
Identities = 74/132 (56%), Positives = 101/132 (76%)
Frame = -1
Query: 400 SLSKKQTWTLVPKPKNQKLVECKWLFKVKEGLLPSDPVRFKARLVAKGFTQREWVYYNEI 221
SL K TW LV KP+++K++ C+WLFK+K G+ +PVR+KARLVAKG+TQRE V Y EI
Sbjct: 95 SLIKNGTWVLVDKPQDRKIIGCRWLFKMKSGIPGVEPVRYKARLVAKGYTQREGVDYQEI 154
Query: 220 FSLVVKFKTIRMMLALVAQYNLELE*LDVKTAFLHGELEDKIYISQSAGFVDKNHHEYVC 41
F+ VVK IR+++++V +LELE +DVKTAFLHGELE+++Y+ Q GF+ ++ VC
Sbjct: 155 FAPVVKHTFIRILMSVVVDQDLELEQMDVKTAFLHGELEEELYMEQPEGFISEDGKNKVC 214
Query: 40 LLNKSLHGLKQS 5
LL K L+GLKQS
Sbjct: 215 LLKKLLYGLKQS 226