BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00008822
         (2796 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006469668.1| PREDICTED: ATP-dependent helicase rhp16-like...  1411   0.0  
ref|XP_006447582.1| hypothetical protein CICLE_v10014220mg [Citr...  1411   0.0  
ref|XP_006469670.1| PREDICTED: ATP-dependent helicase rhp16-like...  1343   0.0  
ref|XP_006447583.1| hypothetical protein CICLE_v10014220mg [Citr...  1276   0.0  
ref|XP_007046385.1| Helicase protein with RING/U-box domain isof...  1130   0.0  
ref|XP_007046386.1| Helicase protein with RING/U-box domain isof...  1120   0.0  
ref|XP_012478613.1| PREDICTED: DNA repair protein RAD16 isoform ...  1115   0.0  
ref|XP_012478612.1| PREDICTED: DNA repair protein RAD16 isoform ...  1115   0.0  
gb|KJB30317.1| hypothetical protein B456_005G137100 [Gossypium r...  1113   0.0  
gb|KJB30318.1| hypothetical protein B456_005G137100 [Gossypium r...  1112   0.0  
gb|KHG22444.1| ATP-dependent helicase rhp16 [Gossypium arboreum]     1109   0.0  
gb|KJB30319.1| hypothetical protein B456_005G137100 [Gossypium r...  1108   0.0  
ref|XP_011047250.1| PREDICTED: DNA repair protein RAD16 isoform ...  1097   0.0  
ref|XP_011047248.1| PREDICTED: DNA repair protein RAD16 isoform ...  1097   0.0  
ref|XP_002320469.2| hypothetical protein POPTR_0014s15270g [Popu...  1094   0.0  
ref|XP_010657210.1| PREDICTED: DNA repair protein RAD16 [Vitis v...  1090   0.0  
emb|CBI28814.3| unnamed protein product [Vitis vinifera]             1081   0.0  
ref|XP_009627930.1| PREDICTED: DNA repair protein RAD16 [Nicotia...  1080   0.0  
ref|XP_009795276.1| PREDICTED: DNA repair protein RAD16 isoform ...  1079   0.0  
ref|XP_011047249.1| PREDICTED: DNA repair protein RAD16 isoform ...  1078   0.0  

>ref|XP_006469668.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X1 [Citrus
            sinensis]
          Length = 885

 Score = 1411 bits (3653), Expect = 0.0
 Identities = 714/873 (81%), Positives = 757/873 (86%), Gaps = 1/873 (0%)
 Frame = -1

Query: 2796 GNSVERDRKGKGIIDISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLS 2617
            GNS E D KGKGIID+SD+SD+ I VPSSDSD      S  SDDECKI GD+  ++LGLS
Sbjct: 25   GNSGEGDSKGKGIIDLSDVSDDEIYVPSSDSD------SFHSDDECKIYGDRHILKLGLS 78

Query: 2616 LETNNFPRSSVSDDFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXXXXXX 2437
            LETNN   SSV+ +FS+ L+AEPAA+R + GPSNLVY  +   QA               
Sbjct: 79   LETNNLTSSSVTGEFSIDLNAEPAAEREEVGPSNLVYCREQPAQAKGKKNESNKKKKTRG 138

Query: 2436 XXXXXXGPPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKE 2257
                  G  LLWE+WEE +E+WID HE DDVDLDQQNA +TETAE+PPDLITPLLRYQKE
Sbjct: 139  KKRQRTGSSLLWEIWEEEHERWIDMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKE 198

Query: 2256 WLAWALKQEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSSSSTGFPGI 2077
            WLAWALKQEE AIRGGILADEMGMGKTIQAIALVLAKRE+R  IGELDASSSSSTG  GI
Sbjct: 199  WLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGI 258

Query: 2076 KGTLVICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEA 1897
            K TLVICPVAAVTQWVSEIN+FT +GSTKVLIYHG NRERSTKQFS FDFVITTYSIIEA
Sbjct: 259  KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGLNRERSTKQFSEFDFVITTYSIIEA 318

Query: 1896 DYRKHVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXX 1717
            DYRKHVMPPK KCQYCGKSFYQKKL +HLKYFCGPSAVRT             S      
Sbjct: 319  DYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRTEKQSKQEKKKMKSSVYEGYP 378

Query: 1716 XXXXXXKTSVEMDSSAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALE 1537
                  K+SV      GGVQ P  GKSPLHS+KWERIILDE HFIKDRRSNTAKAVLALE
Sbjct: 379  GKKNGKKSSV------GGVQKPSGGKSPLHSLKWERIILDEAHFIKDRRSNTAKAVLALE 432

Query: 1536 SSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQECPNCPHNSVR 1357
            SSYKWALSGTPLQNRVGELYSLVRFLQITP SYYFCKDCDC+VLDYS+ ECPNCPHNSVR
Sbjct: 433  SSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKDCDCKVLDYSSAECPNCPHNSVR 492

Query: 1356 HFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLR 1177
            HFCWWNRYVATPIQTHGN  GGRRAMILLKHKVL+S++LRRTKKGRAADLALPPRIVSLR
Sbjct: 493  HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLR 552

Query: 1176 RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSR 997
            RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS+
Sbjct: 553  RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSK 612

Query: 996  TAALRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSI 820
            TA+LRG  EAD EH QQVCGLC DLADDPVVTNCGH FCKACLFDSSASKFVA CPTCSI
Sbjct: 613  TASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSI 672

Query: 819  PLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGS 640
            PLTVDF++NEGAGN+T KTTIKGFK+SSILNRIQLD+FQ+STKIEALREEIRFMVERDGS
Sbjct: 673  PLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGS 732

Query: 639  AKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLK 460
            AKGIVFSQFTSFLDLINYSLHKSG+NCVQLVGSMSIPARDAAI RFTEDP CKIFLMSLK
Sbjct: 733  AKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPHCKIFLMSLK 792

Query: 459  AGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKL 280
            AGGVALNLTVASHVFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRF+IENT+EERILKL
Sbjct: 793  AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 852

Query: 279  QDKKKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            Q+KKKLVFEGTVGGSADA GKLTEADMRFLFVT
Sbjct: 853  QEKKKLVFEGTVGGSADAFGKLTEADMRFLFVT 885


>ref|XP_006447582.1| hypothetical protein CICLE_v10014220mg [Citrus clementina]
            gi|568830792|ref|XP_006469669.1| PREDICTED: ATP-dependent
            helicase rhp16-like isoform X2 [Citrus sinensis]
            gi|557550193|gb|ESR60822.1| hypothetical protein
            CICLE_v10014220mg [Citrus clementina]
          Length = 883

 Score = 1411 bits (3653), Expect = 0.0
 Identities = 714/873 (81%), Positives = 757/873 (86%), Gaps = 1/873 (0%)
 Frame = -1

Query: 2796 GNSVERDRKGKGIIDISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLS 2617
            GNS E D KGKGIID+SD+SD+ I VPSSDSD      S  SDDECKI GD+  ++LGLS
Sbjct: 23   GNSGEGDSKGKGIIDLSDVSDDEIYVPSSDSD------SFHSDDECKIYGDRHILKLGLS 76

Query: 2616 LETNNFPRSSVSDDFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXXXXXX 2437
            LETNN   SSV+ +FS+ L+AEPAA+R + GPSNLVY  +   QA               
Sbjct: 77   LETNNLTSSSVTGEFSIDLNAEPAAEREEVGPSNLVYCREQPAQAKGKKNESNKKKKTRG 136

Query: 2436 XXXXXXGPPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKE 2257
                  G  LLWE+WEE +E+WID HE DDVDLDQQNA +TETAE+PPDLITPLLRYQKE
Sbjct: 137  KKRQRTGSSLLWEIWEEEHERWIDMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKE 196

Query: 2256 WLAWALKQEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSSSSTGFPGI 2077
            WLAWALKQEE AIRGGILADEMGMGKTIQAIALVLAKRE+R  IGELDASSSSSTG  GI
Sbjct: 197  WLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGI 256

Query: 2076 KGTLVICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEA 1897
            K TLVICPVAAVTQWVSEIN+FT +GSTKVLIYHG NRERSTKQFS FDFVITTYSIIEA
Sbjct: 257  KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGLNRERSTKQFSEFDFVITTYSIIEA 316

Query: 1896 DYRKHVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXX 1717
            DYRKHVMPPK KCQYCGKSFYQKKL +HLKYFCGPSAVRT             S      
Sbjct: 317  DYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRTEKQSKQEKKKMKSSVYEGYP 376

Query: 1716 XXXXXXKTSVEMDSSAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALE 1537
                  K+SV      GGVQ P  GKSPLHS+KWERIILDE HFIKDRRSNTAKAVLALE
Sbjct: 377  GKKNGKKSSV------GGVQKPSGGKSPLHSLKWERIILDEAHFIKDRRSNTAKAVLALE 430

Query: 1536 SSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQECPNCPHNSVR 1357
            SSYKWALSGTPLQNRVGELYSLVRFLQITP SYYFCKDCDC+VLDYS+ ECPNCPHNSVR
Sbjct: 431  SSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKDCDCKVLDYSSAECPNCPHNSVR 490

Query: 1356 HFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLR 1177
            HFCWWNRYVATPIQTHGN  GGRRAMILLKHKVL+S++LRRTKKGRAADLALPPRIVSLR
Sbjct: 491  HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLR 550

Query: 1176 RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSR 997
            RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS+
Sbjct: 551  RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSK 610

Query: 996  TAALRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSI 820
            TA+LRG  EAD EH QQVCGLC DLADDPVVTNCGH FCKACLFDSSASKFVA CPTCSI
Sbjct: 611  TASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSI 670

Query: 819  PLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGS 640
            PLTVDF++NEGAGN+T KTTIKGFK+SSILNRIQLD+FQ+STKIEALREEIRFMVERDGS
Sbjct: 671  PLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGS 730

Query: 639  AKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLK 460
            AKGIVFSQFTSFLDLINYSLHKSG+NCVQLVGSMSIPARDAAI RFTEDP CKIFLMSLK
Sbjct: 731  AKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPHCKIFLMSLK 790

Query: 459  AGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKL 280
            AGGVALNLTVASHVFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRF+IENT+EERILKL
Sbjct: 791  AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 850

Query: 279  QDKKKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            Q+KKKLVFEGTVGGSADA GKLTEADMRFLFVT
Sbjct: 851  QEKKKLVFEGTVGGSADAFGKLTEADMRFLFVT 883


>ref|XP_006469670.1| PREDICTED: ATP-dependent helicase rhp16-like isoform X3 [Citrus
            sinensis]
          Length = 846

 Score = 1343 bits (3475), Expect = 0.0
 Identities = 689/873 (78%), Positives = 726/873 (83%), Gaps = 1/873 (0%)
 Frame = -1

Query: 2796 GNSVERDRKGKGIIDISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLS 2617
            GNS E D KGKGIID+SD+SD+ I VPSSDSD      S  SDDE               
Sbjct: 25   GNSGEGDSKGKGIIDLSDVSDDEIYVPSSDSD------SFHSDDE--------------- 63

Query: 2616 LETNNFPRSSVSDDFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXXXXXX 2437
                                    ++R + GPSNLVY  +   QA               
Sbjct: 64   ------------------------SEREEVGPSNLVYCREQPAQAKGKKNESNKKKKTRG 99

Query: 2436 XXXXXXGPPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKE 2257
                  G  LLWE+WEE +E+WID HE DDVDLDQQNA +TETAE+PPDLITPLLRYQKE
Sbjct: 100  KKRQRTGSSLLWEIWEEEHERWIDMHEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKE 159

Query: 2256 WLAWALKQEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSSSSTGFPGI 2077
            WLAWALKQEE AIRGGILADEMGMGKTIQAIALVLAKRE+R  IGELDASSSSSTG  GI
Sbjct: 160  WLAWALKQEESAIRGGILADEMGMGKTIQAIALVLAKREIRGTIGELDASSSSSTGLLGI 219

Query: 2076 KGTLVICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEA 1897
            K TLVICPVAAVTQWVSEIN+FT +GSTKVLIYHG NRERSTKQFS FDFVITTYSIIEA
Sbjct: 220  KATLVICPVAAVTQWVSEINRFTSVGSTKVLIYHGLNRERSTKQFSEFDFVITTYSIIEA 279

Query: 1896 DYRKHVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXX 1717
            DYRKHVMPPK KCQYCGKSFYQKKL +HLKYFCGPSAVRT             S      
Sbjct: 280  DYRKHVMPPKQKCQYCGKSFYQKKLVVHLKYFCGPSAVRTEKQSKQEKKKMKSSVYEGYP 339

Query: 1716 XXXXXXKTSVEMDSSAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALE 1537
                  K+SV      GGVQ P  GKSPLHS+KWERIILDE HFIKDRRSNTAKAVLALE
Sbjct: 340  GKKNGKKSSV------GGVQKPSGGKSPLHSLKWERIILDEAHFIKDRRSNTAKAVLALE 393

Query: 1536 SSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQECPNCPHNSVR 1357
            SSYKWALSGTPLQNRVGELYSLVRFLQITP SYYFCKDCDC+VLDYS+ ECPNCPHNSVR
Sbjct: 394  SSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYFCKDCDCKVLDYSSAECPNCPHNSVR 453

Query: 1356 HFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLR 1177
            HFCWWNRYVATPIQTHGN  GGRRAMILLKHKVL+S++LRRTKKGRAADLALPPRIVSLR
Sbjct: 454  HFCWWNRYVATPIQTHGNSYGGRRAMILLKHKVLRSVILRRTKKGRAADLALPPRIVSLR 513

Query: 1176 RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSR 997
            RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS+
Sbjct: 514  RDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSK 573

Query: 996  TAALRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSI 820
            TA+LRG  EAD EH QQVCGLC DLADDPVVTNCGH FCKACLFDSSASKFVA CPTCSI
Sbjct: 574  TASLRGETEADAEHVQQVCGLCNDLADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSI 633

Query: 819  PLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGS 640
            PLTVDF++NEGAGN+T KTTIKGFK+SSILNRIQLD+FQ+STKIEALREEIRFMVERDGS
Sbjct: 634  PLTVDFTANEGAGNRTSKTTIKGFKSSSILNRIQLDEFQSSTKIEALREEIRFMVERDGS 693

Query: 639  AKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLK 460
            AKGIVFSQFTSFLDLINYSLHKSG+NCVQLVGSMSIPARDAAI RFTEDP CKIFLMSLK
Sbjct: 694  AKGIVFSQFTSFLDLINYSLHKSGVNCVQLVGSMSIPARDAAINRFTEDPHCKIFLMSLK 753

Query: 459  AGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKL 280
            AGGVALNLTVASHVFLMDPWWNPAVE+QAQDRIHRIGQ+KPIRIVRF+IENT+EERILKL
Sbjct: 754  AGGVALNLTVASHVFLMDPWWNPAVEQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKL 813

Query: 279  QDKKKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            Q+KKKLVFEGTVGGSADA GKLTEADMRFLFVT
Sbjct: 814  QEKKKLVFEGTVGGSADAFGKLTEADMRFLFVT 846


>ref|XP_006447583.1| hypothetical protein CICLE_v10014220mg [Citrus clementina]
            gi|557550194|gb|ESR60823.1| hypothetical protein
            CICLE_v10014220mg [Citrus clementina]
          Length = 723

 Score = 1276 bits (3303), Expect = 0.0
 Identities = 638/728 (87%), Positives = 665/728 (91%), Gaps = 1/728 (0%)
 Frame = -1

Query: 2361 HENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQEECAIRGGILADEMGMG 2182
            HE DDVDLDQQNA +TETAE+PPDLITPLLRYQKEWLAWALKQEE AIRGGILADEMGMG
Sbjct: 2    HEKDDVDLDQQNAFMTETAEDPPDLITPLLRYQKEWLAWALKQEESAIRGGILADEMGMG 61

Query: 2181 KTIQAIALVLAKREVRQAIGELDASSSSSTGFPGIKGTLVICPVAAVTQWVSEINQFTLI 2002
            KTIQAIALVLAKRE+R  IGELDASSSSSTG  GIK TLVICPVAAVTQWVSEIN+FT +
Sbjct: 62   KTIQAIALVLAKREIRGTIGELDASSSSSTGLLGIKATLVICPVAAVTQWVSEINRFTSV 121

Query: 2001 GSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHVMPPKHKCQYCGKSFYQKKL 1822
            GSTKVLIYHG NRERSTKQFS FDFVITTYSIIEADYRKHVMPPK KCQYCGKSFYQKKL
Sbjct: 122  GSTKVLIYHGLNRERSTKQFSEFDFVITTYSIIEADYRKHVMPPKQKCQYCGKSFYQKKL 181

Query: 1821 SIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXXKTSVEMDSSAGGVQNPCRG 1642
             +HLKYFCGPSAVRT             S            K+SV      GGVQ P  G
Sbjct: 182  VVHLKYFCGPSAVRTEKQSKQEKKKMKSSVYEGYPGKKNGKKSSV------GGVQKPSGG 235

Query: 1641 KSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 1462
            KSPLHS+KWERIILDE HFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF
Sbjct: 236  KSPLHSLKWERIILDEAHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 295

Query: 1461 LQITPCSYYFCKDCDCRVLDYSAQECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRA 1282
            LQITP SYYFCKDCDC+VLDYS+ ECPNCPHNSVRHFCWWNRYVATPIQTHGN  GGRRA
Sbjct: 296  LQITPYSYYFCKDCDCKVLDYSSAECPNCPHNSVRHFCWWNRYVATPIQTHGNSYGGRRA 355

Query: 1281 MILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 1102
            MILLKHKVL+S++LRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT
Sbjct: 356  MILLKHKVLRSVILRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 415

Query: 1101 YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAALRGGIEADTEH-QQVCGLCQDL 925
            YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYS+TA+LRG  EAD EH QQVCGLC DL
Sbjct: 416  YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSKTASLRGETEADAEHVQQVCGLCNDL 475

Query: 924  ADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFK 745
            ADDPVVTNCGH FCKACLFDSSASKFVA CPTCSIPLTVDF++NEGAGN+T KTTIKGFK
Sbjct: 476  ADDPVVTNCGHAFCKACLFDSSASKFVAKCPTCSIPLTVDFTANEGAGNRTSKTTIKGFK 535

Query: 744  TSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGI 565
            +SSILNRIQLD+FQ+STKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSG+
Sbjct: 536  SSSILNRIQLDEFQSSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGV 595

Query: 564  NCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 385
            NCVQLVGSMSIPARDAAI RFTEDP CKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV
Sbjct: 596  NCVQLVGSMSIPARDAAINRFTEDPHCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 655

Query: 384  EEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEA 205
            E+QAQDRIHRIGQ+KPIRIVRF+IENT+EERILKLQ+KKKLVFEGTVGGSADA GKLTEA
Sbjct: 656  EQQAQDRIHRIGQYKPIRIVRFLIENTIEERILKLQEKKKLVFEGTVGGSADAFGKLTEA 715

Query: 204  DMRFLFVT 181
            DMRFLFVT
Sbjct: 716  DMRFLFVT 723


>ref|XP_007046385.1| Helicase protein with RING/U-box domain isoform 1 [Theobroma cacao]
            gi|508710320|gb|EOY02217.1| Helicase protein with
            RING/U-box domain isoform 1 [Theobroma cacao]
          Length = 896

 Score = 1130 bits (2923), Expect = 0.0
 Identities = 596/892 (66%), Positives = 667/892 (74%), Gaps = 28/892 (3%)
 Frame = -1

Query: 2772 KGKGIIDISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLSLETNNFPR 2593
            K    I + DLSD+ I VPSSDSD                 G+ E  +L     T     
Sbjct: 24   KADDFIQLDDLSDQEIYVPSSDSD----------------QGEVEIFDLNHKPMTATAVS 67

Query: 2592 SSVSDDFSVHLSAEPAAKRVKAGPSNLVYN-GDLSVQAXXXXXXXXXXXXXXXXXXXXXG 2416
                   +V   AEP+  R  A   +   N GD                           
Sbjct: 68   HLAFAPITVSDFAEPSTNRSNAEQQSTEQNEGDYDFYVSSRKKRNNVKRKKKKARSG--- 124

Query: 2415 PPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALK 2236
            P L+WEVWE+ +EKWIDE+   DVDLDQQNA+ITET+E  PDLI PLLRYQKEWLAWALK
Sbjct: 125  PLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALK 184

Query: 2235 QEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASS---SSSTGFPGIKGTL 2065
            QE+ A +GGILADEMGMGKTIQAIALVLAKRE+ + I E + SS   SSST  P I+GTL
Sbjct: 185  QEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTL 244

Query: 2064 VICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRK 1885
            VICPV AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQF  +DFVITTYSI+EA+YRK
Sbjct: 245  VICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRK 304

Query: 1884 HVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXX 1705
            ++MPPK KC YCGKSFYQKKLS+HLKY+CGP AV+T                        
Sbjct: 305  YMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSN 364

Query: 1704 XXKT-------------------SVEMDSSAGGVQNPC-RGKSPLHSVKWERIILDEGHF 1585
                                     E D +  GV++   +GKS LHSVKWERIILDE HF
Sbjct: 365  YETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHF 424

Query: 1584 IKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVL 1405
            +KDRR NTAKAVL LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR L
Sbjct: 425  VKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTL 484

Query: 1404 DYSAQ-ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTK 1228
            DYS+  +C NCPHNSVRHFCWWN+YVATPIQ  GN + G+RAMILLKHK+LK+IVLRRTK
Sbjct: 485  DYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTK 544

Query: 1227 KGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL 1048
            KGRAADLALPPRIVSLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL
Sbjct: 545  KGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL 604

Query: 1047 TRLRQAVDHPYLVVYSRTAALRGG--IEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKA 877
            TRLRQAVDHPYLVVYS TA+ R G  + +D  + +QVCG+C D  ++PVVT C H FCKA
Sbjct: 605  TRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKA 664

Query: 876  CLFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTS 697
            CL D SAS    +CP+CS  LTVD ++   AG Q+ +TT+KGFK+SSILNRIQL+DFQTS
Sbjct: 665  CLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTS 724

Query: 696  TKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDA 517
            TKIEALREEI  MVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMS+ ARDA
Sbjct: 725  TKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDA 784

Query: 516  AIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKP 337
            AIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KP
Sbjct: 785  AIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKP 844

Query: 336  IRIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            IRIVRFVIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFVT
Sbjct: 845  IRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT 896


>ref|XP_007046386.1| Helicase protein with RING/U-box domain isoform 2 [Theobroma cacao]
            gi|590701383|ref|XP_007046388.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
            gi|508710321|gb|EOY02218.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
            gi|508710323|gb|EOY02220.1| Helicase protein with
            RING/U-box domain isoform 2 [Theobroma cacao]
          Length = 836

 Score = 1120 bits (2898), Expect = 0.0
 Identities = 569/772 (73%), Positives = 633/772 (81%), Gaps = 27/772 (3%)
 Frame = -1

Query: 2415 PPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALK 2236
            P L+WEVWE+ +EKWIDE+   DVDLDQQNA+ITET+E  PDLI PLLRYQKEWLAWALK
Sbjct: 65   PLLMWEVWEQEHEKWIDENLTADVDLDQQNAVITETSEASPDLIIPLLRYQKEWLAWALK 124

Query: 2235 QEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASS---SSSTGFPGIKGTL 2065
            QE+ A +GGILADEMGMGKTIQAIALVLAKRE+ + I E + SS   SSST  P I+GTL
Sbjct: 125  QEDSATKGGILADEMGMGKTIQAIALVLAKRELLRTIAEPNGSSLTPSSSTDLPMIRGTL 184

Query: 2064 VICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRK 1885
            VICPV AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQF  +DFVITTYSI+EA+YRK
Sbjct: 185  VICPVVAVSQWVSEIDRFTSRGSTKVLVYHGTNRGKNIKQFLDYDFVITTYSIVEAEYRK 244

Query: 1884 HVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXX 1705
            ++MPPK KC YCGKSFYQKKLS+HLKY+CGP AV+T                        
Sbjct: 245  YMMPPKEKCPYCGKSFYQKKLSVHLKYYCGPDAVKTEKQSKQERKKSKSVFKSDREHTSN 304

Query: 1704 XXKT-------------------SVEMDSSAGGVQNPC-RGKSPLHSVKWERIILDEGHF 1585
                                     E D +  GV++   +GKS LHSVKWERIILDE HF
Sbjct: 305  YETDMRKGAGKKKSKHNEEDKDLDFEFDDTFAGVEHSLPQGKSLLHSVKWERIILDEAHF 364

Query: 1584 IKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVL 1405
            +KDRR NTAKAVL LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR L
Sbjct: 365  VKDRRCNTAKAVLTLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTL 424

Query: 1404 DYSAQ-ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTK 1228
            DYS+  +C NCPHNSVRHFCWWN+YVATPIQ  GN + G+RAMILLKHK+LK+IVLRRTK
Sbjct: 425  DYSSSTQCSNCPHNSVRHFCWWNKYVATPIQQCGNGEIGKRAMILLKHKILKNIVLRRTK 484

Query: 1227 KGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL 1048
            KGRAADLALPPRIVSLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL
Sbjct: 485  KGRAADLALPPRIVSLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLL 544

Query: 1047 TRLRQAVDHPYLVVYSRTAALRGG--IEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKA 877
            TRLRQAVDHPYLVVYS TA+ R G  + +D  + +QVCG+C D  ++PVVT C H FCKA
Sbjct: 545  TRLRQAVDHPYLVVYSSTASQRAGSIVNSDKNNDEQVCGICHDPTEEPVVTACAHVFCKA 604

Query: 876  CLFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTS 697
            CL D SAS    +CP+CS  LTVD ++   AG Q+ +TT+KGFK+SSILNRIQL+DFQTS
Sbjct: 605  CLIDFSASLGQVSCPSCSRLLTVDLTTKADAGGQSSRTTLKGFKSSSILNRIQLNDFQTS 664

Query: 696  TKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDA 517
            TKIEALREEI  MVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMS+ ARDA
Sbjct: 665  TKIEALREEISLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSMAARDA 724

Query: 516  AIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKP 337
            AIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KP
Sbjct: 725  AIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKP 784

Query: 336  IRIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            IRIVRFVIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFVT
Sbjct: 785  IRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFVT 836


>ref|XP_012478613.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Gossypium raimondii]
            gi|763763062|gb|KJB30316.1| hypothetical protein
            B456_005G137100 [Gossypium raimondii]
          Length = 884

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 590/885 (66%), Positives = 660/885 (74%), Gaps = 27/885 (3%)
 Frame = -1

Query: 2757 IDISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLSLETNNFPRSSVSD 2578
            I + DLSD    VPSSDSD                 G++E ++L         P      
Sbjct: 28   IQLDDLSDSETYVPSSDSDL----------------GEEEILDLNHKAVK---PAPITIS 68

Query: 2577 DFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXXXXXXXXXXXXGPPLLWE 2398
            DF+     EP   R   G    + +     Q                      G PL+WE
Sbjct: 69   DFT-----EPPTNR---GNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWE 120

Query: 2397 VWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQEECAI 2218
            VWE+ +EKWIDE+   DVDLDQQNA+ITET++   DLI PLLRYQKEWLAWALKQE+   
Sbjct: 121  VWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNT 180

Query: 2217 RGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSS---SSTGFPGIKGTLVICPVA 2047
            +GGILADEMGMGKTIQAIALVLAKR+V   IGE + SS    SST  P I+ TLVICPV 
Sbjct: 181  KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVV 240

Query: 2046 AVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHVMPPK 1867
            AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQFS +DFVITTYSI+EA+YRK +MPPK
Sbjct: 241  AVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPK 300

Query: 1866 HKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXXKTSV 1687
             KC YCGKSF+QKKLS+HLKY+CGP A++T                            S 
Sbjct: 301  EKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSR 360

Query: 1686 EMDS--------------------SAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRS 1567
            +  S                    SAG   N   GKS LHSVKWERIILDE HF+KDRR 
Sbjct: 361  KRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRC 420

Query: 1566 NTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQ- 1390
            NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDYS+  
Sbjct: 421  NTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSST 480

Query: 1389 ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAAD 1210
            +CPNCPHNSVRHFCWWN+YVATPIQ +GN + G+RAMILLKHK+LK+IVLRRTKKGRAAD
Sbjct: 481  QCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD 540

Query: 1209 LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 1030
            LALPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA
Sbjct: 541  LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 600

Query: 1029 VDHPYLVVYSRTAALRGG--IEAD-TEHQQVCGLCQDLADDPVVTNCGHTFCKACLFDSS 859
            VDHPYLVVYS TAA R G  +  D  + +QVCG+C D A+DPVVT C H FCKACL D S
Sbjct: 601  VDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFS 660

Query: 858  ASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEAL 679
            AS    +CP+CS  LTVD ++N   G Q+ KTT+KGFK+SSILNRIQL+DFQTSTKIEAL
Sbjct: 661  ASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKIEAL 719

Query: 678  REEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFT 499
            REEIRFMVERDGSAKGIVFSQFTSFLD+I YSLHKS I CVQLVGSMS+ ARDAAIK FT
Sbjct: 720  REEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFT 779

Query: 498  EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRF 319
            EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KPIRIVRF
Sbjct: 780  EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRIVRF 839

Query: 318  VIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFV 184
            VIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFV
Sbjct: 840  VIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 884


>ref|XP_012478612.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Gossypium raimondii]
            gi|763763058|gb|KJB30312.1| hypothetical protein
            B456_005G137100 [Gossypium raimondii]
          Length = 885

 Score = 1115 bits (2884), Expect = 0.0
 Identities = 590/885 (66%), Positives = 660/885 (74%), Gaps = 27/885 (3%)
 Frame = -1

Query: 2757 IDISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLSLETNNFPRSSVSD 2578
            I + DLSD    VPSSDSD                 G++E ++L         P      
Sbjct: 29   IQLDDLSDSETYVPSSDSDL----------------GEEEILDLNHKAVK---PAPITIS 69

Query: 2577 DFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXXXXXXXXXXXXGPPLLWE 2398
            DF+     EP   R   G    + +     Q                      G PL+WE
Sbjct: 70   DFT-----EPPTNR---GNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWE 121

Query: 2397 VWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQEECAI 2218
            VWE+ +EKWIDE+   DVDLDQQNA+ITET++   DLI PLLRYQKEWLAWALKQE+   
Sbjct: 122  VWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNT 181

Query: 2217 RGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSS---SSTGFPGIKGTLVICPVA 2047
            +GGILADEMGMGKTIQAIALVLAKR+V   IGE + SS    SST  P I+ TLVICPV 
Sbjct: 182  KGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVV 241

Query: 2046 AVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHVMPPK 1867
            AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQFS +DFVITTYSI+EA+YRK +MPPK
Sbjct: 242  AVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPK 301

Query: 1866 HKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXXKTSV 1687
             KC YCGKSF+QKKLS+HLKY+CGP A++T                            S 
Sbjct: 302  EKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSR 361

Query: 1686 EMDS--------------------SAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRS 1567
            +  S                    SAG   N   GKS LHSVKWERIILDE HF+KDRR 
Sbjct: 362  KRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRC 421

Query: 1566 NTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQ- 1390
            NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDYS+  
Sbjct: 422  NTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSST 481

Query: 1389 ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAAD 1210
            +CPNCPHNSVRHFCWWN+YVATPIQ +GN + G+RAMILLKHK+LK+IVLRRTKKGRAAD
Sbjct: 482  QCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAAD 541

Query: 1209 LALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 1030
            LALPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA
Sbjct: 542  LALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQA 601

Query: 1029 VDHPYLVVYSRTAALRGG--IEAD-TEHQQVCGLCQDLADDPVVTNCGHTFCKACLFDSS 859
            VDHPYLVVYS TAA R G  +  D  + +QVCG+C D A+DPVVT C H FCKACL D S
Sbjct: 602  VDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFS 661

Query: 858  ASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEAL 679
            AS    +CP+CS  LTVD ++N   G Q+ KTT+KGFK+SSILNRIQL+DFQTSTKIEAL
Sbjct: 662  ASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKIEAL 720

Query: 678  REEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFT 499
            REEIRFMVERDGSAKGIVFSQFTSFLD+I YSLHKS I CVQLVGSMS+ ARDAAIK FT
Sbjct: 721  REEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFT 780

Query: 498  EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRF 319
            EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KPIRIVRF
Sbjct: 781  EDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRIVRF 840

Query: 318  VIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFV 184
            VIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFV
Sbjct: 841  VIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 885


>gb|KJB30317.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 926

 Score = 1113 bits (2880), Expect = 0.0
 Identities = 589/883 (66%), Positives = 659/883 (74%), Gaps = 27/883 (3%)
 Frame = -1

Query: 2751 ISDLSDENISVPSSDSDYDTSVPSLDSDDECKINGDKEFVELGLSLETNNFPRSSVSDDF 2572
            + DLSD    VPSSDSD                 G++E ++L         P      DF
Sbjct: 72   LDDLSDSETYVPSSDSDL----------------GEEEILDLNHKAVK---PAPITISDF 112

Query: 2571 SVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXXXXXXXXXXXXGPPLLWEVW 2392
            +     EP   R   G    + +     Q                      G PL+WEVW
Sbjct: 113  T-----EPPTNR---GNGEQILSEQNESQFDFNVSTAKKRNNTKRKKKARSGQPLMWEVW 164

Query: 2391 EEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQEECAIRG 2212
            E+ +EKWIDE+   DVDLDQQNA+ITET++   DLI PLLRYQKEWLAWALKQE+   +G
Sbjct: 165  EQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQEDSNTKG 224

Query: 2211 GILADEMGMGKTIQAIALVLAKREVRQAIGELDASSS---SSTGFPGIKGTLVICPVAAV 2041
            GILADEMGMGKTIQAIALVLAKR+V   IGE + SS    SST  P I+ TLVICPV AV
Sbjct: 225  GILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVICPVVAV 284

Query: 2040 TQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHVMPPKHK 1861
            +QWVSEI++FT  GSTKVL+YHG+NR ++ KQFS +DFVITTYSI+EA+YRK +MPPK K
Sbjct: 285  SQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMMPPKEK 344

Query: 1860 CQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXXKTSVEM 1681
            C YCGKSF+QKKLS+HLKY+CGP A++T                            S + 
Sbjct: 345  CPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEADSRKR 404

Query: 1680 DS--------------------SAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNT 1561
             S                    SAG   N   GKS LHSVKWERIILDE HF+KDRR NT
Sbjct: 405  GSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKDRRCNT 464

Query: 1560 AKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQ-EC 1384
            AKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDYS+  +C
Sbjct: 465  AKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYSSSTQC 524

Query: 1383 PNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLA 1204
            PNCPHNSVRHFCWWN+YVATPIQ +GN + G+RAMILLKHK+LK+IVLRRTKKGRAADLA
Sbjct: 525  PNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGRAADLA 584

Query: 1203 LPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVD 1024
            LPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVD
Sbjct: 585  LPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVD 644

Query: 1023 HPYLVVYSRTAALRGG--IEAD-TEHQQVCGLCQDLADDPVVTNCGHTFCKACLFDSSAS 853
            HPYLVVYS TAA R G  +  D  + +QVCG+C D A+DPVVT C H FCKACL D SAS
Sbjct: 645  HPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLIDFSAS 704

Query: 852  KFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALRE 673
                +CP+CS  LTVD ++N   G Q+ KTT+KGFK+SSILNRIQL+DFQTSTKIEALRE
Sbjct: 705  LGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKIEALRE 763

Query: 672  EIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTED 493
            EIRFMVERDGSAKGIVFSQFTSFLD+I YSLHKS I CVQLVGSMS+ ARDAAIK FTED
Sbjct: 764  EIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIKSFTED 823

Query: 492  PDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVI 313
            PDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KPIRIVRFVI
Sbjct: 824  PDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRIVRFVI 883

Query: 312  ENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFV 184
            ENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFV
Sbjct: 884  ENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 926


>gb|KJB30318.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 840

 Score = 1112 bits (2876), Expect = 0.0
 Identities = 566/770 (73%), Positives = 628/770 (81%), Gaps = 27/770 (3%)
 Frame = -1

Query: 2412 PLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQ 2233
            PL+WEVWE+ +EKWIDE+   DVDLDQQNA+ITET++   DLI PLLRYQKEWLAWALKQ
Sbjct: 72   PLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQ 131

Query: 2232 EECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSS---SSTGFPGIKGTLV 2062
            E+   +GGILADEMGMGKTIQAIALVLAKR+V   IGE + SS    SST  P I+ TLV
Sbjct: 132  EDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLV 191

Query: 2061 ICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKH 1882
            ICPV AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQFS +DFVITTYSI+EA+YRK 
Sbjct: 192  ICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKF 251

Query: 1881 VMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXX 1702
            +MPPK KC YCGKSF+QKKLS+HLKY+CGP A++T                         
Sbjct: 252  MMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNY 311

Query: 1701 XKTSVEMDS--------------------SAGGVQNPCRGKSPLHSVKWERIILDEGHFI 1582
               S +  S                    SAG   N   GKS LHSVKWERIILDE HF+
Sbjct: 312  EADSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 371

Query: 1581 KDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLD 1402
            KDRR NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LD
Sbjct: 372  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLD 431

Query: 1401 YSAQ-ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKK 1225
            YS+  +CPNCPHNSVRHFCWWN+YVATPIQ +GN + G+RAMILLKHK+LK+IVLRRTKK
Sbjct: 432  YSSSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 491

Query: 1224 GRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 1045
            GRAADLALPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT
Sbjct: 492  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 551

Query: 1044 RLRQAVDHPYLVVYSRTAALRGG--IEAD-TEHQQVCGLCQDLADDPVVTNCGHTFCKAC 874
            RLRQAVDHPYLVVYS TAA R G  +  D  + +QVCG+C D A+DPVVT C H FCKAC
Sbjct: 552  RLRQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 611

Query: 873  LFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTST 694
            L D SAS    +CP+CS  LTVD ++N   G Q+ KTT+KGFK+SSILNRIQL+DFQTST
Sbjct: 612  LIDFSASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTST 670

Query: 693  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAA 514
            KIEALREEIRFMVERDGSAKGIVFSQFTSFLD+I YSLHKS I CVQLVGSMS+ ARDAA
Sbjct: 671  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAA 730

Query: 513  IKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPI 334
            IK FTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KPI
Sbjct: 731  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 790

Query: 333  RIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFV 184
            RIVRFVIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFV
Sbjct: 791  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 840


>gb|KHG22444.1| ATP-dependent helicase rhp16 [Gossypium arboreum]
          Length = 885

 Score = 1109 bits (2869), Expect = 0.0
 Identities = 564/770 (73%), Positives = 628/770 (81%), Gaps = 27/770 (3%)
 Frame = -1

Query: 2412 PLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQ 2233
            PL+WEVWE+ +EKWIDE+   DVDLDQQNA+ITET++   DLI PLLRYQKEWLAWALKQ
Sbjct: 117  PLMWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQ 176

Query: 2232 EECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSS---SSTGFPGIKGTLV 2062
            E+   +GGILADEMGMGKTIQAIALVLAKR+V   IGE + SS    SST  P I+ TLV
Sbjct: 177  EDSNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLV 236

Query: 2061 ICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKH 1882
            ICPV AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQFS +DFVITTYSI+EA+YRK 
Sbjct: 237  ICPVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKF 296

Query: 1881 VMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXX 1702
            +MPPK KC YCGKSF+QKKLS+HLKY+CGP A++T                         
Sbjct: 297  MMPPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNY 356

Query: 1701 XKTSVEM--------------------DSSAGGVQNPCRGKSPLHSVKWERIILDEGHFI 1582
               S +                     ++SAG   N   GKS LHSVKWERIILDE HF+
Sbjct: 357  EADSRKRASKKKAKHNKEDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFV 416

Query: 1581 KDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLD 1402
            KDRR NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDC+ LD
Sbjct: 417  KDRRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCKTLD 476

Query: 1401 YSAQ-ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKK 1225
            YS+  +CP CPHNSVRHFCWWN+YVATPIQ +GN + G+RAMILLKHK+LK+IVLRRTKK
Sbjct: 477  YSSSTQCPKCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKK 536

Query: 1224 GRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 1045
            GRAADLALPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT
Sbjct: 537  GRAADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLT 596

Query: 1044 RLRQAVDHPYLVVYSRTAALRGG--IEAD-TEHQQVCGLCQDLADDPVVTNCGHTFCKAC 874
            RLRQAVDHPYLVVYS TAA R G  +  D  + +QVCG+C D A+DPVVT C H FCKAC
Sbjct: 597  RLRQAVDHPYLVVYSSTAAQRAGNIVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKAC 656

Query: 873  LFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTST 694
            L D SAS    +CP+CS  LTVD ++N   G Q+ KTT+KGFK+SSILNRIQL+DFQTST
Sbjct: 657  LIDFSASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTST 715

Query: 693  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAA 514
            KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLI YSLHKS I CVQLVGSMS+ ARDAA
Sbjct: 716  KIEALREEIRFMVERDGSAKGIVFSQFTSFLDLIKYSLHKSSIKCVQLVGSMSLAARDAA 775

Query: 513  IKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPI 334
            IK FTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KPI
Sbjct: 776  IKSFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPI 835

Query: 333  RIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFV 184
            RIVRFVIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFV
Sbjct: 836  RIVRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 885


>gb|KJB30319.1| hypothetical protein B456_005G137100 [Gossypium raimondii]
          Length = 767

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 564/768 (73%), Positives = 626/768 (81%), Gaps = 27/768 (3%)
 Frame = -1

Query: 2406 LWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQEE 2227
            +WEVWE+ +EKWIDE+   DVDLDQQNA+ITET++   DLI PLLRYQKEWLAWALKQE+
Sbjct: 1    MWEVWEQEHEKWIDENLTVDVDLDQQNAVITETSDASSDLIIPLLRYQKEWLAWALKQED 60

Query: 2226 CAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSS---SSTGFPGIKGTLVIC 2056
               +GGILADEMGMGKTIQAIALVLAKR+V   IGE + SS    SST  P I+ TLVIC
Sbjct: 61   SNTKGGILADEMGMGKTIQAIALVLAKRQVLHTIGEPNVSSQTAGSSTDLPRIRCTLVIC 120

Query: 2055 PVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHVM 1876
            PV AV+QWVSEI++FT  GSTKVL+YHG+NR ++ KQFS +DFVITTYSI+EA+YRK +M
Sbjct: 121  PVVAVSQWVSEIDRFTSRGSTKVLVYHGANRGKNVKQFSEYDFVITTYSIVEAEYRKFMM 180

Query: 1875 PPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXXK 1696
            PPK KC YCGKSF+QKKLS+HLKY+CGP A++T                           
Sbjct: 181  PPKEKCPYCGKSFHQKKLSVHLKYYCGPDAIKTENQSKQERKKPKSMFKSGKKHASNYEA 240

Query: 1695 TSVEMDS--------------------SAGGVQNPCRGKSPLHSVKWERIILDEGHFIKD 1576
             S +  S                    SAG   N   GKS LHSVKWERIILDE HF+KD
Sbjct: 241  DSRKRGSKKKAKHNREDKDRDFEFDETSAGKEHNLPEGKSLLHSVKWERIILDEAHFVKD 300

Query: 1575 RRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYS 1396
            RR NTAKAVL+LES YKWALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDYS
Sbjct: 301  RRCNTAKAVLSLESLYKWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYS 360

Query: 1395 AQ-ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGR 1219
            +  +CPNCPHNSVRHFCWWN+YVATPIQ +GN + G+RAMILLKHK+LK+IVLRRTKKGR
Sbjct: 361  SSTQCPNCPHNSVRHFCWWNKYVATPIQHYGNGEIGKRAMILLKHKILKNIVLRRTKKGR 420

Query: 1218 AADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRL 1039
            AADLALPPRI+SLRRD++DI+E DYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRL
Sbjct: 421  AADLALPPRIISLRRDTMDIKETDYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRL 480

Query: 1038 RQAVDHPYLVVYSRTAALRGG--IEAD-TEHQQVCGLCQDLADDPVVTNCGHTFCKACLF 868
            RQAVDHPYLVVYS TAA R G  +  D  + +QVCG+C D A+DPVVT C H FCKACL 
Sbjct: 481  RQAVDHPYLVVYSSTAAQRAGNMVNGDRNDDEQVCGICNDPAEDPVVTACAHVFCKACLI 540

Query: 867  DSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKI 688
            D SAS    +CP+CS  LTVD ++N   G Q+ KTT+KGFK+SSILNRIQL+DFQTSTKI
Sbjct: 541  DFSASLGNVSCPSCSRLLTVDLTTNADGG-QSSKTTLKGFKSSSILNRIQLNDFQTSTKI 599

Query: 687  EALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIK 508
            EALREEIRFMVERDGSAKGIVFSQFTSFLD+I YSLHKS I CVQLVGSMS+ ARDAAIK
Sbjct: 600  EALREEIRFMVERDGSAKGIVFSQFTSFLDIIKYSLHKSSIKCVQLVGSMSLAARDAAIK 659

Query: 507  RFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRI 328
             FTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ KPIRI
Sbjct: 660  SFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQCKPIRI 719

Query: 327  VRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFV 184
            VRFVIENT+EERILKLQ+KK+LVFEGTVGGS +ALGKLTEADMRFLFV
Sbjct: 720  VRFVIENTIEERILKLQEKKELVFEGTVGGSTEALGKLTEADMRFLFV 767


>ref|XP_011047250.1| PREDICTED: DNA repair protein RAD16 isoform X3 [Populus euphratica]
          Length = 833

 Score = 1097 bits (2838), Expect = 0.0
 Identities = 547/750 (72%), Positives = 622/750 (82%), Gaps = 7/750 (0%)
 Frame = -1

Query: 2409 LLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQE 2230
            L+WEVWEEG++KWI+E+ ++DVD D    +  +TAE P DLI PLLR+QKEWLAWAL+QE
Sbjct: 87   LMWEVWEEGHDKWINENLSEDVDFDHHRGLEAKTAEAPSDLIMPLLRFQKEWLAWALEQE 146

Query: 2229 ECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASS---SSSTGFPGIKGTLVI 2059
            E + RGGILADEMGMGKTIQAIALVLAKRE+ Q + E +  S    SS+   GIK TLV+
Sbjct: 147  ESSTRGGILADEMGMGKTIQAIALVLAKRELHQNLFEFNGPSPFSGSSSDLAGIKATLVV 206

Query: 2058 CPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHV 1879
            CPV AVTQWVSEI+++T  GSTKVL+YHG+NRE+S+K F  +DFVITTYSIIE+++RK++
Sbjct: 207  CPVVAVTQWVSEIDRYTTKGSTKVLVYHGANREKSSKLFHDYDFVITTYSIIESEFRKYM 266

Query: 1878 MPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXX 1699
            MPPK KC YCG SFY+KKL++HLKYFCGP A RT                          
Sbjct: 267  MPPKKKCVYCGNSFYEKKLTVHLKYFCGPDANRTAKQSKQAKKKLKNVPSASKQKTESDK 326

Query: 1698 KTSVEMDSSAG--GVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYK 1525
              S  M+ S    G+Q   + KS LHS+KWERIILDE HFIKDRR NTAKAV AL+SSYK
Sbjct: 327  DKSRPMELSEAELGLQ---KEKSLLHSLKWERIILDEAHFIKDRRCNTAKAVFALDSSYK 383

Query: 1524 WALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDY-SAQECPNCPHNSVRHFC 1348
            WALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDY S+ +C +CPH+SVRHFC
Sbjct: 384  WALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYGSSTQCSSCPHSSVRHFC 443

Query: 1347 WWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDS 1168
            WWN+YV+ PIQ HGN D GRRAMILLKHKVLK+IVLRRTKKGRA+DLALPPRIV LRRD 
Sbjct: 444  WWNKYVSNPIQKHGNADYGRRAMILLKHKVLKNIVLRRTKKGRASDLALPPRIVILRRDI 503

Query: 1167 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAA 988
            LD+RE DYYESLY+ESQAQFNTYV+ GT+MNNYAHIFDLLTRLRQAVDHPYLVVYS+T+A
Sbjct: 504  LDVREEDYYESLYNESQAQFNTYVEEGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTSA 563

Query: 987  LRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLT 811
            L+GG   D +  +  CG+C + A+DPVVT+C H FCK CL D SAS    +CP CS  LT
Sbjct: 564  LKGGNVVDLDSAKNACGICHEPAEDPVVTSCAHGFCKTCLLDFSASFGEVSCPVCSKSLT 623

Query: 810  VDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKG 631
            VDF+ N  AG+QT KTTIKGF++ SILNR+QLDDFQTSTKIEALREEIRFM ERDGSAKG
Sbjct: 624  VDFTGNVDAGDQTAKTTIKGFRSGSILNRVQLDDFQTSTKIEALREEIRFMAERDGSAKG 683

Query: 630  IVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGG 451
            IVFSQFTSFLDLI+YSLHKSGI+CVQLVGSMS+ ARDAAIKRF EDPDCKIFLMSLKAGG
Sbjct: 684  IVFSQFTSFLDLIHYSLHKSGISCVQLVGSMSLAARDAAIKRFAEDPDCKIFLMSLKAGG 743

Query: 450  VALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDK 271
            VALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ+KPIRIVRFVIENTVEERIL+LQ+K
Sbjct: 744  VALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTVEERILQLQEK 803

Query: 270  KKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            K+LVFEGTVGGS++ALGKLTEAD+RFLF T
Sbjct: 804  KELVFEGTVGGSSEALGKLTEADLRFLFAT 833


>ref|XP_011047248.1| PREDICTED: DNA repair protein RAD16 isoform X1 [Populus euphratica]
          Length = 867

 Score = 1097 bits (2838), Expect = 0.0
 Identities = 547/750 (72%), Positives = 622/750 (82%), Gaps = 7/750 (0%)
 Frame = -1

Query: 2409 LLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQE 2230
            L+WEVWEEG++KWI+E+ ++DVD D    +  +TAE P DLI PLLR+QKEWLAWAL+QE
Sbjct: 121  LMWEVWEEGHDKWINENLSEDVDFDHHRGLEAKTAEAPSDLIMPLLRFQKEWLAWALEQE 180

Query: 2229 ECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASS---SSSTGFPGIKGTLVI 2059
            E + RGGILADEMGMGKTIQAIALVLAKRE+ Q + E +  S    SS+   GIK TLV+
Sbjct: 181  ESSTRGGILADEMGMGKTIQAIALVLAKRELHQNLFEFNGPSPFSGSSSDLAGIKATLVV 240

Query: 2058 CPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHV 1879
            CPV AVTQWVSEI+++T  GSTKVL+YHG+NRE+S+K F  +DFVITTYSIIE+++RK++
Sbjct: 241  CPVVAVTQWVSEIDRYTTKGSTKVLVYHGANREKSSKLFHDYDFVITTYSIIESEFRKYM 300

Query: 1878 MPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXX 1699
            MPPK KC YCG SFY+KKL++HLKYFCGP A RT                          
Sbjct: 301  MPPKKKCVYCGNSFYEKKLTVHLKYFCGPDANRTAKQSKQAKKKLKNVPSASKQKTESDK 360

Query: 1698 KTSVEMDSSAG--GVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYK 1525
              S  M+ S    G+Q   + KS LHS+KWERIILDE HFIKDRR NTAKAV AL+SSYK
Sbjct: 361  DKSRPMELSEAELGLQ---KEKSLLHSLKWERIILDEAHFIKDRRCNTAKAVFALDSSYK 417

Query: 1524 WALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDY-SAQECPNCPHNSVRHFC 1348
            WALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDY S+ +C +CPH+SVRHFC
Sbjct: 418  WALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYGSSTQCSSCPHSSVRHFC 477

Query: 1347 WWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDS 1168
            WWN+YV+ PIQ HGN D GRRAMILLKHKVLK+IVLRRTKKGRA+DLALPPRIV LRRD 
Sbjct: 478  WWNKYVSNPIQKHGNADYGRRAMILLKHKVLKNIVLRRTKKGRASDLALPPRIVILRRDI 537

Query: 1167 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAA 988
            LD+RE DYYESLY+ESQAQFNTYV+ GT+MNNYAHIFDLLTRLRQAVDHPYLVVYS+T+A
Sbjct: 538  LDVREEDYYESLYNESQAQFNTYVEEGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTSA 597

Query: 987  LRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLT 811
            L+GG   D +  +  CG+C + A+DPVVT+C H FCK CL D SAS    +CP CS  LT
Sbjct: 598  LKGGNVVDLDSAKNACGICHEPAEDPVVTSCAHGFCKTCLLDFSASFGEVSCPVCSKSLT 657

Query: 810  VDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKG 631
            VDF+ N  AG+QT KTTIKGF++ SILNR+QLDDFQTSTKIEALREEIRFM ERDGSAKG
Sbjct: 658  VDFTGNVDAGDQTAKTTIKGFRSGSILNRVQLDDFQTSTKIEALREEIRFMAERDGSAKG 717

Query: 630  IVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGG 451
            IVFSQFTSFLDLI+YSLHKSGI+CVQLVGSMS+ ARDAAIKRF EDPDCKIFLMSLKAGG
Sbjct: 718  IVFSQFTSFLDLIHYSLHKSGISCVQLVGSMSLAARDAAIKRFAEDPDCKIFLMSLKAGG 777

Query: 450  VALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDK 271
            VALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ+KPIRIVRFVIENTVEERIL+LQ+K
Sbjct: 778  VALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTVEERILQLQEK 837

Query: 270  KKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            K+LVFEGTVGGS++ALGKLTEAD+RFLF T
Sbjct: 838  KELVFEGTVGGSSEALGKLTEADLRFLFAT 867


>ref|XP_002320469.2| hypothetical protein POPTR_0014s15270g [Populus trichocarpa]
            gi|550324256|gb|EEE98784.2| hypothetical protein
            POPTR_0014s15270g [Populus trichocarpa]
          Length = 869

 Score = 1094 bits (2830), Expect = 0.0
 Identities = 546/750 (72%), Positives = 621/750 (82%), Gaps = 7/750 (0%)
 Frame = -1

Query: 2409 LLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQE 2230
            L+WEVWEEG++KWI+E+  +DVD D    +  +TAE P DLI PLLR+QKEWLAWAL+QE
Sbjct: 123  LMWEVWEEGHDKWINENLTEDVDFDHNRGLEAKTAEAPSDLIMPLLRFQKEWLAWALEQE 182

Query: 2229 ECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASS---SSSTGFPGIKGTLVI 2059
            E + RGGILADEMGMGKTIQAIALVLAKRE+ Q + E +  S    SS+   GIK TLV+
Sbjct: 183  ESSTRGGILADEMGMGKTIQAIALVLAKRELHQNLFEFNGPSPFSGSSSDLAGIKATLVV 242

Query: 2058 CPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHV 1879
            CPV AVTQWV+EI+++T  GSTKVL+YHG+NRE+S+K F  +DFVITTYSIIE+++RK++
Sbjct: 243  CPVVAVTQWVNEIDRYTTKGSTKVLVYHGANREKSSKLFHDYDFVITTYSIIESEFRKYM 302

Query: 1878 MPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXX 1699
            MPPK KC YCG SFY+KKL++HLKYFCGP A RT                          
Sbjct: 303  MPPKKKCVYCGNSFYEKKLTVHLKYFCGPDANRTAKQSKQAKKKQKTVPSASKQKTESDK 362

Query: 1698 KTSVEMDSSAG--GVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYK 1525
              S  M+ S    G+Q   + KS LHS+KWERIILDE HFIKDRR NTAKAV AL+SSYK
Sbjct: 363  DKSCPMELSEVELGLQ---KEKSLLHSLKWERIILDEAHFIKDRRCNTAKAVFALDSSYK 419

Query: 1524 WALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDY-SAQECPNCPHNSVRHFC 1348
            WALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDY S+ +C +CPH+SVRHFC
Sbjct: 420  WALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYGSSTQCSSCPHSSVRHFC 479

Query: 1347 WWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDS 1168
            WWN+YV+ PIQ HGN D GRRAMILLKHKVLK+IVLRRTKKGRA+DLALPPRIV LRRD 
Sbjct: 480  WWNKYVSNPIQKHGNADYGRRAMILLKHKVLKNIVLRRTKKGRASDLALPPRIVILRRDI 539

Query: 1167 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAA 988
            LD+RE DYYESLY+ESQAQFNTYV+AGT+MNNYAHIFDLLTRLRQAVDHPYLVVYS+T+A
Sbjct: 540  LDVREEDYYESLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTSA 599

Query: 987  LRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLT 811
            L+GG   D +  +  CG+C + A+DPVVT+C H FCK CL D SAS    +CP CS  LT
Sbjct: 600  LKGGNMVDLDSAKNACGICHEPAEDPVVTSCAHGFCKTCLLDFSASFGEVSCPVCSKSLT 659

Query: 810  VDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKG 631
            VDF+ N  AG+QT KTTIKGF++ SILNR+QLDDFQTSTKIEALREEIRFM ERDGSAKG
Sbjct: 660  VDFTGNVDAGDQTAKTTIKGFRSGSILNRVQLDDFQTSTKIEALREEIRFMAERDGSAKG 719

Query: 630  IVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGG 451
            IVFSQFTSFLDLI+YSL KSGI+CVQLVGSMS+ ARDAAIKRF EDPDCKIFLMSLKAGG
Sbjct: 720  IVFSQFTSFLDLIHYSLQKSGISCVQLVGSMSLAARDAAIKRFAEDPDCKIFLMSLKAGG 779

Query: 450  VALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDK 271
            VALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ+KPIRIVRFVIENTVEERIL+LQ+K
Sbjct: 780  VALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTVEERILQLQEK 839

Query: 270  KKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            K+LVFEGTVGGS++ALGKLTEAD+RFLF T
Sbjct: 840  KELVFEGTVGGSSEALGKLTEADLRFLFAT 869


>ref|XP_010657210.1| PREDICTED: DNA repair protein RAD16 [Vitis vinifera]
          Length = 936

 Score = 1090 bits (2818), Expect = 0.0
 Identities = 547/774 (70%), Positives = 623/774 (80%), Gaps = 29/774 (3%)
 Frame = -1

Query: 2415 PPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALK 2236
            P L+WE+WEE ++KWID +  +DVDLD QN +++ETA+ P DLI PLLRYQKEWLAWALK
Sbjct: 163  PTLMWEIWEEEHDKWIDMNLTEDVDLDHQNELVSETADAPSDLIMPLLRYQKEWLAWALK 222

Query: 2235 QEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDA---SSSSSTGFPGIKGTL 2065
            QEE   RGGILADEMGMGKTIQAIALVL+KRE+ Q I E      +  SS   P IKGTL
Sbjct: 223  QEESTTRGGILADEMGMGKTIQAIALVLSKREISQKICEPKVVLRAPGSSMDLPKIKGTL 282

Query: 2064 VICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRK 1885
            VICPV AV QWV+EI +FT+ GSTKVL+YHG+NR +S  QFS +DFVITTYSI+EA+YRK
Sbjct: 283  VICPVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYSIVEAEYRK 342

Query: 1884 HVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXX 1705
            +VMPPK KC +C K FY  K+SIHL+YFCGP A++T                        
Sbjct: 343  NVMPPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELKISDSVEDN 402

Query: 1704 XXKTSVE------------------------MDSSAGGVQNPCRGKSPLHSVKWERIILD 1597
              +   E                        +++SA   Q+    KS LHSVKW+RIILD
Sbjct: 403  GGECEGEKRKKDQPKPRKNYKPKKHMGFGPSIENSAVDEQSTSTRKSILHSVKWDRIILD 462

Query: 1596 EGHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCD 1417
            E HFIKDRRSNTAKAVLALES YKWALSGTPLQNRVGELYSL+RFL+I P SYY CKDCD
Sbjct: 463  EAHFIKDRRSNTAKAVLALESEYKWALSGTPLQNRVGELYSLIRFLRIIPYSYYLCKDCD 522

Query: 1416 CRVLDYSAQ-ECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVL 1240
            CR LDYS+  ECPNC H SVRHFCWWN+YVATPIQ  GN+  G+RAMILLKHK+LKSI+L
Sbjct: 523  CRTLDYSSSTECPNCEHKSVRHFCWWNKYVATPIQAMGNIGEGQRAMILLKHKILKSILL 582

Query: 1239 RRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHI 1060
            RRTKKGRAADLALPPRIVSLRRD+LDI+E DYY+SLY+ESQAQFNTYV+AGT+MNNYAHI
Sbjct: 583  RRTKKGRAADLALPPRIVSLRRDTLDIKEEDYYQSLYNESQAQFNTYVEAGTLMNNYAHI 642

Query: 1059 FDLLTRLRQAVDHPYLVVYSRTAALRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFC 883
            FDLLTRLRQAVDHPYLVVYSRT+ LR G   DTE+ +QVCG+C D  +DPVVT+C H FC
Sbjct: 643  FDLLTRLRQAVDHPYLVVYSRTSTLRAGNIVDTENGEQVCGICNDPLEDPVVTSCAHVFC 702

Query: 882  KACLFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQ 703
            KACL D S +    +CP+CS PLTVD +++   G++ +KTTIKGFK SSILNRI+LDDFQ
Sbjct: 703  KACLNDFSTTLGQVSCPSCSKPLTVDLTTSMDPGDRDMKTTIKGFKPSSILNRIRLDDFQ 762

Query: 702  TSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPAR 523
            TSTKI+ALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSL KSGI CVQLVGSMS+ AR
Sbjct: 763  TSTKIDALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAAR 822

Query: 522  DAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQF 343
            DAAI RFT +PDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ+
Sbjct: 823  DAAISRFTNEPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQY 882

Query: 342  KPIRIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            KPIRIVRFVIE T+EERILKLQ+KK+LVFEGTVGGS++ALGKLTEAD++FLF+T
Sbjct: 883  KPIRIVRFVIEKTIEERILKLQEKKELVFEGTVGGSSEALGKLTEADLKFLFIT 936


>emb|CBI28814.3| unnamed protein product [Vitis vinifera]
          Length = 964

 Score = 1081 bits (2796), Expect = 0.0
 Identities = 539/749 (71%), Positives = 613/749 (81%), Gaps = 4/749 (0%)
 Frame = -1

Query: 2415 PPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALK 2236
            P L+WE+WEE ++KWID +  +DVDLD QN +++ETA+ P DLI PLLRYQKEWLAWALK
Sbjct: 233  PTLMWEIWEEEHDKWIDMNLTEDVDLDHQNELVSETADAPSDLIMPLLRYQKEWLAWALK 292

Query: 2235 QEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSSSSTGFPGIKGTLVIC 2056
            QEE   RGGILADEMGMGKTIQAIALVL+KRE+ Q I                  TLVIC
Sbjct: 293  QEESTTRGGILADEMGMGKTIQAIALVLSKREISQKIC-----------------TLVIC 335

Query: 2055 PVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHVM 1876
            PV AV QWV+EI +FT+ GSTKVL+YHG+NR +S  QFS +DFVITTYSI+EA+YRK+VM
Sbjct: 336  PVVAVLQWVNEIGRFTVKGSTKVLVYHGANRGKSIGQFSEYDFVITTYSIVEAEYRKNVM 395

Query: 1875 PPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXXK 1696
            PPK KC +C K FY  K+SIHL+YFCGP A++T                           
Sbjct: 396  PPKQKCVFCRKLFYPHKMSIHLRYFCGPDAIKTDKQSKQKKKEPKLELKISDSNYKPKKH 455

Query: 1695 TSV--EMDSSAGGVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYKW 1522
                  +++SA   Q+    KS LHSVKW+RIILDE HFIKDRRSNTAKAVLALES YKW
Sbjct: 456  MGFGPSIENSAVDEQSTSTRKSILHSVKWDRIILDEAHFIKDRRSNTAKAVLALESEYKW 515

Query: 1521 ALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDYSAQ-ECPNCPHNSVRHFCW 1345
            ALSGTPLQNRVGELYSL+RFL+I P SYY CKDCDCR LDYS+  ECPNC H SVRHFCW
Sbjct: 516  ALSGTPLQNRVGELYSLIRFLRIIPYSYYLCKDCDCRTLDYSSSTECPNCEHKSVRHFCW 575

Query: 1344 WNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDSL 1165
            WN+YVATPIQ  GN+  G+RAMILLKHK+LKSI+LRRTKKGRAADLALPPRIVSLRRD+L
Sbjct: 576  WNKYVATPIQAMGNIGEGQRAMILLKHKILKSILLRRTKKGRAADLALPPRIVSLRRDTL 635

Query: 1164 DIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAAL 985
            DI+E DYY+SLY+ESQAQFNTYV+AGT+MNNYAHIFDLLTRLRQAVDHPYLVVYSRT+ L
Sbjct: 636  DIKEEDYYQSLYNESQAQFNTYVEAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSRTSTL 695

Query: 984  RGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLTV 808
            R G   DTE+ +QVCG+C D  +DPVVT+C H FCKACL D S +    +CP+CS PLTV
Sbjct: 696  RAGNIVDTENGEQVCGICNDPLEDPVVTSCAHVFCKACLNDFSTTLGQVSCPSCSKPLTV 755

Query: 807  DFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKGI 628
            D +++   G++ +KTTIKGFK SSILNRI+LDDFQTSTKI+ALREEIRFMVERDGSAKGI
Sbjct: 756  DLTTSMDPGDRDMKTTIKGFKPSSILNRIRLDDFQTSTKIDALREEIRFMVERDGSAKGI 815

Query: 627  VFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGGV 448
            VFSQFTSFLDLINYSL KSGI CVQLVGSMS+ ARDAAI RFT +PDCKIFLMSLKAGGV
Sbjct: 816  VFSQFTSFLDLINYSLQKSGITCVQLVGSMSMAARDAAISRFTNEPDCKIFLMSLKAGGV 875

Query: 447  ALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDKK 268
            ALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ+KPIRIVRFVIE T+EERILKLQ+KK
Sbjct: 876  ALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIEKTIEERILKLQEKK 935

Query: 267  KLVFEGTVGGSADALGKLTEADMRFLFVT 181
            +LVFEGTVGGS++ALGKLTEAD++FLF+T
Sbjct: 936  ELVFEGTVGGSSEALGKLTEADLKFLFIT 964


>ref|XP_009627930.1| PREDICTED: DNA repair protein RAD16 [Nicotiana tomentosiformis]
          Length = 916

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 564/908 (62%), Positives = 666/908 (73%), Gaps = 44/908 (4%)
 Frame = -1

Query: 2772 KGKGIIDISDLSDENISVP-SSDSDYDTSVPSLDSDD-------ECKING--DKEFVELG 2623
            KG+G     D SDE+  +P SSDSDY   + S D D+       E + NG  D ++ E  
Sbjct: 13   KGEGSYQYQDSSDEDDFLPMSSDSDY---IGSSDEDEDIFNLLRESQTNGVLDNDYSEEV 69

Query: 2622 LS--LETNNFPRSSVSDDFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXX 2449
            LS  ++      S      ++    E   +       N V  G                 
Sbjct: 70   LSNIIKRRKVGSSRKRGSRNIKSKEEQVDEEHVDWMMNEVGCGVEVDSGYLLLMGRIEDR 129

Query: 2448 XXXXXXXXXXGPPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLR 2269
                       P L+WE+WEE N++W+ E+  +D+DLD QN ++ ETAE P DL+ PLLR
Sbjct: 130  KKNRDKNKKKRPTLMWEIWEEENDRWMAENYTNDLDLDCQNGLVNETAETPSDLLMPLLR 189

Query: 2268 YQKEWLAWALKQEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASSSS--- 2098
            YQKEWLAWALKQEE   RGG+LADEMGMGKT+QAIALVLAKRE+ QAI E     S+   
Sbjct: 190  YQKEWLAWALKQEESTARGGVLADEMGMGKTVQAIALVLAKRELGQAISESSLPPSAPCT 249

Query: 2097 STGFPGIKGTLVICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVIT 1918
            S   P +KGTLVICPV AV QWVSEI++FT  GS K+L+YHG+NRE++  +F+ +DFVIT
Sbjct: 250  SQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIHKFAEYDFVIT 309

Query: 1917 TYSIIEADYRKHVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRT-------XXXXXX 1759
            TYS +EA+YRK+VMPPK KCQ+CGKSFY++KLS+H +YFCGP AVRT             
Sbjct: 310  TYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQRYFCGPDAVRTAKQSKQERKKLKP 369

Query: 1758 XXXXXXXSXXXXXXXXXXXXKTSVEMDSSAG---GV------------------QNPCRG 1642
                                 + +E  S  G   GV                  Q+    
Sbjct: 370  GGKMSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKRKIKTDAGSIDDATGVDQDMITR 429

Query: 1641 KSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 1462
            KS LHSVKW RIILDE H++KDRR NTA+A+ ALESSYKWALSGTPLQNRVGELYSLVRF
Sbjct: 430  KSILHSVKWNRIILDEAHYVKDRRCNTARAIFALESSYKWALSGTPLQNRVGELYSLVRF 489

Query: 1461 LQITPCSYYFCKDCDCRVLDYSAQECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRA 1282
            LQ+ P SYYFCKDCDCRVLDYS+ +CP+CPH SVRHFCWWN+Y+A+PIQ+ GN   GR A
Sbjct: 490  LQMIPYSYYFCKDCDCRVLDYSSTDCPHCPHKSVRHFCWWNKYIASPIQSQGNRGTGRDA 549

Query: 1281 MILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 1102
            M+LLKHK+LKSI+LRRTKKGRAADLALPPRIV+LR+DSLD++E DYY SLY+ESQAQFNT
Sbjct: 550  MVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNT 609

Query: 1101 YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAALRGGIEADTEH-QQVCGLCQDL 925
            Y+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYS TA  R G   D+ + +Q CGLC D 
Sbjct: 610  YIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARSGNTDDSGYAEQPCGLCHDP 669

Query: 924  ADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFK 745
             +DPVV +C H FCK+CL D SAS    +CP+CS PLTVDF++NE  G+Q  K  +KGF+
Sbjct: 670  VEDPVVASCTHVFCKSCLIDFSASVGQVSCPSCSKPLTVDFTANE-KGDQKTKPHVKGFR 728

Query: 744  TSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGI 565
            +SSILNRI+L+DFQTSTKI+ALREEIRFMVERDGSAK IVFSQFTSFLDLI+YSL KSGI
Sbjct: 729  SSSILNRIRLNDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYSLQKSGI 788

Query: 564  NCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 385
            +CVQLVGSMSI ARD+AI RFTEDPDC+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV
Sbjct: 789  SCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 848

Query: 384  EEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEA 205
            E+QAQDRIHRIGQ+KPIRIVRFVIENT+EERILKLQ+KK+LVFEGTVGGS++ALGKLTEA
Sbjct: 849  EQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEA 908

Query: 204  DMRFLFVT 181
            D++FLFVT
Sbjct: 909  DLKFLFVT 916


>ref|XP_009795276.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Nicotiana sylvestris]
          Length = 916

 Score = 1079 bits (2791), Expect = 0.0
 Identities = 560/908 (61%), Positives = 668/908 (73%), Gaps = 44/908 (4%)
 Frame = -1

Query: 2772 KGKGIIDISDLSDENISVP-SSDSDYDTSVPSLDSDDE-------CKING--DKEFVELG 2623
            KG+G     D SDE+  +P SSDSDY   + S D D++        + NG  D +F E  
Sbjct: 13   KGEGNYQYQDSSDEDGFLPMSSDSDY---IGSSDEDEDIFNLLRVAQTNGVLDNDFSEEV 69

Query: 2622 LS--LETNNFPRSSVSDDFSVHLSAEPAAKRVKAGPSNLVYNGDLSVQAXXXXXXXXXXX 2449
            LS  ++      S      ++  + E   +       N V  G                 
Sbjct: 70   LSNIIKRRKVGSSRKRGSKNIKSNEEQVEEEHVDRMMNEVGCGVEVDSGYRLLMGRIEDR 129

Query: 2448 XXXXXXXXXXGPPLLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLR 2269
                       P L+WE+WEE N++W+ E+  +D+DLD QN ++ +TAE P DL+ PLLR
Sbjct: 130  KKNRDKNKKKRPTLMWEIWEEENDRWMAENYTNDLDLDCQNGLVNDTAETPSDLLMPLLR 189

Query: 2268 YQKEWLAWALKQEECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGE---LDASSSS 2098
            YQKEWLAWALKQEE   RGGILADEMGMGKT+QAIALVLAKRE+ QAI E   L ++  +
Sbjct: 190  YQKEWLAWALKQEESTARGGILADEMGMGKTVQAIALVLAKRELGQAISESSLLSSAPCT 249

Query: 2097 STGFPGIKGTLVICPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVIT 1918
            S   P +KGTLVICPV AV QWVSEI++FT  GS K+L+YHG+NRE++  +F+ +DFVIT
Sbjct: 250  SQELPAVKGTLVICPVVAVIQWVSEIDRFTTKGSNKILVYHGANREKNIHKFAEYDFVIT 309

Query: 1917 TYSIIEADYRKHVMPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXX 1738
            TYS +EA+YRK+VMPPK KCQ+CGKSFY++KLS+H +YFCGP AVRT             
Sbjct: 310  TYSTVEAEYRKNVMPPKEKCQWCGKSFYEQKLSVHQRYFCGPDAVRTAKQLKQERKKSKP 369

Query: 1737 SXXXXXXXXXXXXKTS-----------------------VEMDSS-----AGGVQNPCRG 1642
                           +                       ++ D+S     AG  Q+    
Sbjct: 370  GGKTSKLKKESIKGKAKTDSDSEIETGSKRGRGKGVKRKIKTDASSIDDAAGVDQDMITR 429

Query: 1641 KSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYKWALSGTPLQNRVGELYSLVRF 1462
            KS LHSVKW RIILDE H++KDRR NT +A+ ALESSYKWALSGTPLQNRVGELYSLVRF
Sbjct: 430  KSILHSVKWNRIILDEAHYVKDRRCNTTRAIFALESSYKWALSGTPLQNRVGELYSLVRF 489

Query: 1461 LQITPCSYYFCKDCDCRVLDYSAQECPNCPHNSVRHFCWWNRYVATPIQTHGNLDGGRRA 1282
            LQ+ P SYYFCKDCDCRVLDYS  +CP+CPH SVRHFCWWN+Y+A+PIQ+ GN   GR A
Sbjct: 490  LQMIPYSYYFCKDCDCRVLDYSPTDCPHCPHKSVRHFCWWNKYIASPIQSQGNRGTGRDA 549

Query: 1281 MILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDSLDIREADYYESLYSESQAQFNT 1102
            M+LLKHK+LKSI+LRRTKKGRAADLALPPRIV+LR+DSLD++E DYY SLY+ESQAQFNT
Sbjct: 550  MVLLKHKILKSILLRRTKKGRAADLALPPRIVTLRKDSLDVKEEDYYTSLYNESQAQFNT 609

Query: 1101 YVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAALRGGIEADTEH-QQVCGLCQDL 925
            Y+QAGT+MNNYAHIFDLLTRLRQAVDHPYLVVYS TA  R G   D+ + +Q CGLC D 
Sbjct: 610  YIQAGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSSTALARSGNTDDSGYVEQPCGLCHDP 669

Query: 924  ADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLTVDFSSNEGAGNQTIKTTIKGFK 745
             +DPVV +C H FCK+CL D SA+    +CP+CS PL VDF++N+  G+Q  K T+KGF+
Sbjct: 670  VEDPVVASCTHVFCKSCLIDFSATVGQVSCPSCSKPLAVDFTAND-KGDQKTKPTVKGFR 728

Query: 744  TSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKGIVFSQFTSFLDLINYSLHKSGI 565
            +SSILNRI+L+DFQTSTKI+ALREEIRFMVERDGSAK IVFSQFTSFLDLI+YSL KSGI
Sbjct: 729  SSSILNRIRLNDFQTSTKIDALREEIRFMVERDGSAKAIVFSQFTSFLDLIHYSLQKSGI 788

Query: 564  NCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 385
            +CVQLVGSMSI ARD+AI RFTEDPDC+IFLMSLKAGGVALNLTVASHVFLMDPWWNPAV
Sbjct: 789  SCVQLVGSMSITARDSAITRFTEDPDCRIFLMSLKAGGVALNLTVASHVFLMDPWWNPAV 848

Query: 384  EEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDKKKLVFEGTVGGSADALGKLTEA 205
            E+QAQDRIHRIGQ+KPIRIVRFVIENT+EERILKLQ+KK+LVFEGTVGGS++ALGKLTEA
Sbjct: 849  EQQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEA 908

Query: 204  DMRFLFVT 181
            D++FLFVT
Sbjct: 909  DLKFLFVT 916


>ref|XP_011047249.1| PREDICTED: DNA repair protein RAD16 isoform X2 [Populus euphratica]
          Length = 860

 Score = 1078 bits (2787), Expect = 0.0
 Identities = 541/750 (72%), Positives = 615/750 (82%), Gaps = 7/750 (0%)
 Frame = -1

Query: 2409 LLWEVWEEGNEKWIDEHENDDVDLDQQNAIITETAENPPDLITPLLRYQKEWLAWALKQE 2230
            L+WEVWEEG++KWI+E+ ++DVD D    +  +TAE P DLI PLLR+QKEWLAWAL+QE
Sbjct: 121  LMWEVWEEGHDKWINENLSEDVDFDHHRGLEAKTAEAPSDLIMPLLRFQKEWLAWALEQE 180

Query: 2229 ECAIRGGILADEMGMGKTIQAIALVLAKREVRQAIGELDASS---SSSTGFPGIKGTLVI 2059
            E + RGGILADEMGMGKTIQAIALVLAKRE+ Q + E +  S    SS+   GIK TLV+
Sbjct: 181  ESSTRGGILADEMGMGKTIQAIALVLAKRELHQNLFEFNGPSPFSGSSSDLAGIKATLVV 240

Query: 2058 CPVAAVTQWVSEINQFTLIGSTKVLIYHGSNRERSTKQFSVFDFVITTYSIIEADYRKHV 1879
            CPV AVTQWVSEI+++T  GSTKVL+YHG+NRE+S+K F  +DFVITTYSIIE+++RK++
Sbjct: 241  CPVVAVTQWVSEIDRYTTKGSTKVLVYHGANREKSSKLFHDYDFVITTYSIIESEFRKYM 300

Query: 1878 MPPKHKCQYCGKSFYQKKLSIHLKYFCGPSAVRTXXXXXXXXXXXXXSXXXXXXXXXXXX 1699
            MPPK KC YCG SFY+KKL++HLKYFCGP A RT                          
Sbjct: 301  MPPKKKCVYCGNSFYEKKLTVHLKYFCGPDANRTAKQSKQAKKKLKNVPSASKQKTESDK 360

Query: 1698 KTSVEMDSSAG--GVQNPCRGKSPLHSVKWERIILDEGHFIKDRRSNTAKAVLALESSYK 1525
              S  M+ S    G+Q   + KS LHS+KWERIILDE HFIKDRR NTAKAV AL+SSYK
Sbjct: 361  DKSRPMELSEAELGLQ---KEKSLLHSLKWERIILDEAHFIKDRRCNTAKAVFALDSSYK 417

Query: 1524 WALSGTPLQNRVGELYSLVRFLQITPCSYYFCKDCDCRVLDY-SAQECPNCPHNSVRHFC 1348
            WALSGTPLQNRVGELYSLVRFLQI P SYY CKDCDCR LDY S+ +C +CPH+SVRHFC
Sbjct: 418  WALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRTLDYGSSTQCSSCPHSSVRHFC 477

Query: 1347 WWNRYVATPIQTHGNLDGGRRAMILLKHKVLKSIVLRRTKKGRAADLALPPRIVSLRRDS 1168
            WWN+YV+ PIQ HGN D GRRAMILLKHKVLK+IVLRRTKKGRA+DLALPPRIV LRRD 
Sbjct: 478  WWNKYVSNPIQKHGNADYGRRAMILLKHKVLKNIVLRRTKKGRASDLALPPRIVILRRDI 537

Query: 1167 LDIREADYYESLYSESQAQFNTYVQAGTVMNNYAHIFDLLTRLRQAVDHPYLVVYSRTAA 988
            LD+RE DYYESLY+ESQAQFNTYV+ GT+MNNYAHIFDLLTRLRQAVDHPYLVVYS+T+A
Sbjct: 538  LDVREEDYYESLYNESQAQFNTYVEEGTLMNNYAHIFDLLTRLRQAVDHPYLVVYSKTSA 597

Query: 987  LRGGIEADTEH-QQVCGLCQDLADDPVVTNCGHTFCKACLFDSSASKFVANCPTCSIPLT 811
            L+GG   D +  +  CG+C + A+DPVVT+C H FCK CL D SAS    +CP CS  LT
Sbjct: 598  LKGGNVVDLDSAKNACGICHEPAEDPVVTSCAHGFCKTCLLDFSASFGEVSCPVCSKSLT 657

Query: 810  VDFSSNEGAGNQTIKTTIKGFKTSSILNRIQLDDFQTSTKIEALREEIRFMVERDGSAKG 631
            VDF+ N  AG+QT KTTIKGF++ SILNR+QLDDFQTSTKIEALREEIRFM ERDGSAKG
Sbjct: 658  VDFTGNVDAGDQTAKTTIKGFRSGSILNRVQLDDFQTSTKIEALREEIRFMAERDGSAKG 717

Query: 630  IVFSQFTSFLDLINYSLHKSGINCVQLVGSMSIPARDAAIKRFTEDPDCKIFLMSLKAGG 451
            IVFSQFTSFLDLI+YSLHK       LVGSMS+ ARDAAIKRF EDPDCKIFLMSLKAGG
Sbjct: 718  IVFSQFTSFLDLIHYSLHK-------LVGSMSLAARDAAIKRFAEDPDCKIFLMSLKAGG 770

Query: 450  VALNLTVASHVFLMDPWWNPAVEEQAQDRIHRIGQFKPIRIVRFVIENTVEERILKLQDK 271
            VALNLTVASHVFLMDPWWNPAVE QAQDRIHRIGQ+KPIRIVRFVIENTVEERIL+LQ+K
Sbjct: 771  VALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTVEERILQLQEK 830

Query: 270  KKLVFEGTVGGSADALGKLTEADMRFLFVT 181
            K+LVFEGTVGGS++ALGKLTEAD+RFLF T
Sbjct: 831  KELVFEGTVGGSSEALGKLTEADLRFLFAT 860