BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00008594
         (2919 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO45877.1| hypothetical protein CISIN_1g002316mg [Citrus sin...  1245   0.0  
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...  1241   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...  1238   0.0  
gb|KDO45878.1| hypothetical protein CISIN_1g002316mg [Citrus sin...  1204   0.0  
gb|KDO45879.1| hypothetical protein CISIN_1g002316mg [Citrus sin...  1156   0.0  
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...  1153   0.0  
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...  1036   0.0  
ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron sp...   997   0.0  
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   995   0.0  
ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron sp...   998   0.0  
gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitat...   996   0.0  
ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron sp...   990   0.0  
ref|XP_011030574.1| PREDICTED: chloroplastic group IIA intron sp...   975   0.0  
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...  1002   0.0  
ref|XP_011030575.1| PREDICTED: chloroplastic group IIA intron sp...   972   0.0  
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   975   0.0  
ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron sp...   986   0.0  
ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron sp...   986   0.0  
gb|KDO45880.1| hypothetical protein CISIN_1g002316mg [Citrus sin...   895   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   978   0.0  

>gb|KDO45877.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 936

 Score = 1245 bits (3221), Expect = 0.0
 Identities = 645/766 (84%), Positives = 681/766 (88%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 171  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 230

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KRR+SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 231  EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 290

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 291  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 350

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S NSLS A DKT QDPS    Y++V A Q  L 
Sbjct: 351  RIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLE 410

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 411  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 470

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 471  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 530

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 531  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 590

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 591  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 650

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESITDEERFMFRKLGLRMKAF
Sbjct: 651  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 710

Query: 983  LLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 804
            LLLGRRGVFDGTVENMHLHWKYREL+KIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS
Sbjct: 711  LLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 770

Query: 803  KGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRSE 624
            KGYAM+VYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE+N GRLRSE
Sbjct: 771  KGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 830

Query: 623  IEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNLL 444
            IEQ+NSVK TGDE+LYDKLDSAYAT          EAYLE Y+GGND+EDE +NS HNL 
Sbjct: 831  IEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLE 890

Query: 443  TESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDNGF 306
             ESDFPYHAQD ESET L DS++EAY V S  C STDI E EDN F
Sbjct: 891  MESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVE-EDNNF 935



 Score =  130 bits (326), Expect = 9e-27
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            N FFY NFSSN + E+NPPRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score = 1241 bits (3212), Expect = 0.0
 Identities = 643/766 (83%), Positives = 680/766 (88%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 169  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 228

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KRR+SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 229  EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 288

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 289  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 348

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S NSLS A DKT QDPS    Y++V   Q  L 
Sbjct: 349  RIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLE 408

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 409  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 468

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 469  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 528

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 529  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 588

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 589  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 648

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESIT+EERFMFRKLGLRMKAF
Sbjct: 649  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITNEERFMFRKLGLRMKAF 708

Query: 983  LLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 804
            LLLGRRGVFDGTVENMHLHWKYREL+KIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS
Sbjct: 709  LLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 768

Query: 803  KGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRSE 624
            KGYAM+VYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE+N GRLRSE
Sbjct: 769  KGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 828

Query: 623  IEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNLL 444
            IEQ+NSVK TGDE+LYDKLDSAYAT          EAYLE Y+GGND+EDE +NS HNL 
Sbjct: 829  IEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLE 888

Query: 443  TESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDNGF 306
             ESDFPYHAQD ESET L DS++EAY V S  C STDI E EDN F
Sbjct: 889  MESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVE-EDNNF 933



 Score =  130 bits (328), Expect = 5e-27
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            NHFFY NFSSN + E+N PRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NHFFYQNFSSNSAHEKNTPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score = 1238 bits (3204), Expect = 0.0
 Identities = 644/766 (84%), Positives = 680/766 (88%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 169  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 228

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KR +SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 229  EEVAEGRWLVKR-SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 287

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 288  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 347

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S NSLS A DKT QDPS    Y++V A Q  L 
Sbjct: 348  RIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLE 407

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 408  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 467

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 468  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 527

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 528  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 587

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 588  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 647

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESITDEERFMFRKLGLRMKAF
Sbjct: 648  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 707

Query: 983  LLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 804
            LLLGRRGVFDGTVENMHLHWKYREL+KIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS
Sbjct: 708  LLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 767

Query: 803  KGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRSE 624
            KGYAM+VYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE+N GRLRSE
Sbjct: 768  KGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 827

Query: 623  IEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNLL 444
            IEQ+NSVK TGDE+LYDKLDSAYAT          EAYLE Y+GGND+EDE +NS HNL 
Sbjct: 828  IEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLE 887

Query: 443  TESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDNGF 306
             ESDFPYHAQD ESET L DS++EAY V S  C STDI E EDN F
Sbjct: 888  MESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVE-EDNNF 932



 Score =  130 bits (326), Expect = 9e-27
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            N FFY NFSSN + E+NPPRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>gb|KDO45878.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 908

 Score = 1204 bits (3116), Expect = 0.0
 Identities = 630/766 (82%), Positives = 664/766 (86%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 171  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 230

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KRR+SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 231  EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 290

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 291  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 350

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S N                            L 
Sbjct: 351  RIYKRNELPASSVSQATDKQIHKQISMSVN----------------------------LE 382

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 383  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 442

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 443  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 502

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 503  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 562

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 563  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 622

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESITDEERFMFRKLGLRMKAF
Sbjct: 623  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 682

Query: 983  LLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 804
            LLLGRRGVFDGTVENMHLHWKYREL+KIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS
Sbjct: 683  LLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 742

Query: 803  KGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRSE 624
            KGYAM+VYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE+N GRLRSE
Sbjct: 743  KGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 802

Query: 623  IEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNLL 444
            IEQ+NSVK TGDE+LYDKLDSAYAT          EAYLE Y+GGND+EDE +NS HNL 
Sbjct: 803  IEQMNSVKGTGDEQLYDKLDSAYATEDDDSEDEGDEAYLEMYAGGNDNEDEIDNSTHNLE 862

Query: 443  TESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDNGF 306
             ESDFPYHAQD ESET L DS++EAY V S  C STDI E EDN F
Sbjct: 863  MESDFPYHAQDQESETELMDSESEAYTVHSTYCASTDIVE-EDNNF 907



 Score =  130 bits (326), Expect = 9e-27
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            N FFY NFSSN + E+NPPRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>gb|KDO45879.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 862

 Score = 1156 bits (2991), Expect = 0.0
 Identities = 595/685 (86%), Positives = 626/685 (91%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 171  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 230

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KRR+SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 231  EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 290

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 291  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 350

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S NSLS A DKT QDPS    Y++V A Q  L 
Sbjct: 351  RIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLE 410

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 411  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 470

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 471  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 530

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 531  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 590

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 591  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 650

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESITDEERFMFRKLGLRMKAF
Sbjct: 651  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 710

Query: 983  LLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 804
            LLLGRRGVFDGTVENMHLHWKYREL+KIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS
Sbjct: 711  LLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 770

Query: 803  KGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRSE 624
            KGYAM+VYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE+N GRLRSE
Sbjct: 771  KGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 830

Query: 623  IEQINSVKNTGDEELYDKLDSAYAT 549
            IEQ+NSVK TGDE+LYDKLDSAYAT
Sbjct: 831  IEQMNSVKGTGDEQLYDKLDSAYAT 855



 Score =  130 bits (326), Expect = 9e-27
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            N FFY NFSSN + E+NPPRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score = 1153 bits (2982), Expect = 0.0
 Identities = 593/685 (86%), Positives = 625/685 (91%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 169  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 228

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KRR+SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 229  EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 288

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 289  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 348

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S NSLS A DKT QDPS    Y++V   Q  L 
Sbjct: 349  RIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLE 408

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 409  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 468

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 469  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 528

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 529  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 588

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 589  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 648

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESIT+EERFMFRKLGLRMKAF
Sbjct: 649  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITNEERFMFRKLGLRMKAF 708

Query: 983  LLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 804
            LLLGRRGVFDGTVENMHLHWKYREL+KIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS
Sbjct: 709  LLLGRRGVFDGTVENMHLHWKYRELVKIIVKVKTFDQAKKIALALEAESGGVLVSVDKIS 768

Query: 803  KGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRSE 624
            KGYAM+VYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLE+N GRLRSE
Sbjct: 769  KGYAMVVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLESNAGRLRSE 828

Query: 623  IEQINSVKNTGDEELYDKLDSAYAT 549
            IEQ+NSVK TGDE+LYDKLDSAYAT
Sbjct: 829  IEQMNSVKGTGDEQLYDKLDSAYAT 853



 Score =  130 bits (328), Expect = 5e-27
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            NHFFY NFSSN + E+N PRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NHFFYQNFSSNSAHEKNTPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
            gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
            1 [Theobroma cacao]
          Length = 876

 Score = 1036 bits (2680), Expect(2) = 0.0
 Identities = 533/731 (72%), Positives = 605/731 (82%), Gaps = 1/731 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E+  +E KRVIE+GSIEDIFYVEEGMLPN RGGFSKESPLG+    GSDGEV+FPWEKRK
Sbjct: 155  EKGEEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRK 214

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            E+E EG W+A RR S+TSLAELTLPESELRRLRNLTF+T SK +I GAGVTQ VVD IHE
Sbjct: 215  EDEEEGGWTA-RRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHE 273

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKT EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGT+VSLYRGVSYEVPSV  +K
Sbjct: 274  KWKTEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSK 333

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNE  + ++   +DK +                    D S LG + DV++PQ    
Sbjct: 334  RIYKRNETFTYALPSVSDKTK--------------------DLSSLGSHKDVVSPQANSE 373

Query: 1883 TAAE-QQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
            TAAE  ++TE +PE++YEDEV+KLL+ LGPRYTDWPGC+P PVDADLLPGIV GYQPPFR
Sbjct: 374  TAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFR 433

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS+L  KEATSL+RLARVLPPHFA+GRSRQLQGLAVAMIKLWEKSSIAKIALKR
Sbjct: 434  VLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKR 493

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIKKLTGG LLSRNKDFLVFYRGKNFLS DV EAL ERERLAKSLQDE
Sbjct: 494  GVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSADVAEALVERERLAKSLQDE 553

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASAF++PS E+ E+SG AGTLGETLDA+ARWGKRLD+ HKE +M+EAE+ RHA
Sbjct: 554  EEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHA 613

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL+                    L+KVE +LKPA+RQ DPESITDEERFMFRKLGLRMKA
Sbjct: 614  NLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKA 673

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGT+ENMHLHWKYREL+KII+K KTFDQ KK+ALALEAESGGVLVSVD+I
Sbjct: 674  FLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRI 733

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SKGYA+IVYRGKDYQRPST+RPKNLLTKR+ALARSIELQR+EAL+KHV+ L+  V ++RS
Sbjct: 734  SKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRREALVKHVSALQAKVDKIRS 793

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
            EI+Q++S++  GDEE YD+LDS+Y T          EAYLETY   ND E+E++  +HNL
Sbjct: 794  EIDQMHSMEEQGDEEFYDRLDSSYPTDDDDTEEEGDEAYLETYESENDAEEENDELIHNL 853

Query: 446  LTESDFPYHAQ 414
              E+ FP+H Q
Sbjct: 854  HLETKFPFHDQ 864



 Score = 35.4 bits (80), Expect(2) = 0.0
 Identities = 25/75 (33%), Positives = 35/75 (46%)
 Frame = -3

Query: 2902 HNFSSNVSIEQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRK 2723
            +  +SN    Q P  K  +  T KD        S+WL  WNK  K    KPP+   NYRK
Sbjct: 57   YTVTSNSLFHQYPKSKTKAFPT-KDPTFR----SNWLDSWNKTHKGFGPKPPKTVFNYRK 111

Query: 2722 NDVNLSGLGFGRSDS 2678
               ++  L + +SD+
Sbjct: 112  KG-DVWSLSYSQSDN 125


>ref|XP_008224429.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Prunus mume]
          Length = 899

 Score =  997 bits (2578), Expect(2) = 0.0
 Identities = 523/765 (68%), Positives = 609/765 (79%), Gaps = 1/765 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E +G+ + RV+EKGS+EDIFYVEEG LPN+RGGFS+ESPLGI    G DG+V+FPWEK K
Sbjct: 159  ENKGEVRDRVMEKGSVEDIFYVEEGKLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPK 218

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EEE + + S +R+ SRTSLAELTLPESELRRL NLTFQ   KT+I G GVTQAVV++IHE
Sbjct: 219  EEEKQEEGSVRRK-SRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHE 277

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            +WKTSEIVRLKIEG PALNMKRMHEILERKTGGLVIWRSGT++SLYRGVSYEVPSV+ NK
Sbjct: 278  RWKTSEIVRLKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNK 337

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYL- 1887
             IYK+N+                    SS    T  DK++ D ++L  YS+V  P+E L 
Sbjct: 338  QIYKKNDT-------------------SSAPFPTVADKSVGDFAELASYSNVKTPKEKLE 378

Query: 1886 GTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
             T+ E+++TE + EVKYEDEV+KLLDSLGPR+ DWPGCDP PVDAD+LPGIV GYQPPFR
Sbjct: 379  NTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDADMLPGIVPGYQPPFR 438

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS L  KEATSL+RLARVLPPHFALGRSRQLQGLAVAM KLWEKS IAKIALKR
Sbjct: 439  VLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWEKSLIAKIALKR 498

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIK+LTGG +LSRNKDFLVFYRGKNFLSPDVTEAL ERERLAKSLQDE
Sbjct: 499  GVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFYRGKNFLSPDVTEALLERERLAKSLQDE 558

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA ++P++E+ +  GT GTLGETLDA+A+WGKRLD   KE +MREA++ RHA
Sbjct: 559  EEQARLRASAMIIPNVEVAQHFGTTGTLGETLDADAKWGKRLD---KEKVMREADILRHA 615

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            +L+                    LSKVE  LKP+++Q DPESITDEERFMFRKLGLRMKA
Sbjct: 616  HLVRKLERKLSFAERKLMRAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGLRMKA 675

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGTVENMHLHWKYREL+KI+V  KTF+Q K IALALEAESGGVLVSVDK+
Sbjct: 676  FLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKTFEQVKNIALALEAESGGVLVSVDKV 735

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SK +A+IVYRGKDY RPSTLRPKNLLTKRKALARSIELQRQEALLKH++ +++ V  LR 
Sbjct: 736  SKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIELQRQEALLKHISAVQSKVDTLRC 795

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
            EIEQ++SVK+ GDE LY+KLDS+Y T          +AYLETY+  ND EDE   S+ N 
Sbjct: 796  EIEQMDSVKDQGDEALYNKLDSSYPT--DDEDSEEGDAYLETYNSENDGEDEGNYSICNP 853

Query: 446  LTESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDN 312
              E++FPY  ++ +S+T L   +   +AVP+ SC  +D  E  D+
Sbjct: 854  HLETNFPYF-ENQDSQTELEVPQHHLHAVPTNSCAGSDQDEERDS 897



 Score = 54.7 bits (130), Expect(2) = 0.0
 Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 8/87 (9%)
 Frame = -3

Query: 2914 HFFY---HNFSSNVSIEQNPPRKFCSLTT----SKDNNANLCSSSSWLVKWNKPDKYNRV 2756
            H FY   +  SS ++ EQNP RK   +      S+       SSSSW+ KWN+  K+N  
Sbjct: 44   HTFYATHYTISSTLNPEQNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNCP 103

Query: 2755 KPPQAAVNYRKNDV-NLSGLGFGRSDS 2678
            KPP+A ++Y+ ++  NLSG G+   DS
Sbjct: 104  KPPRAVLDYQSSESGNLSGSGYAEGDS 130


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  995 bits (2573), Expect(2) = 0.0
 Identities = 525/765 (68%), Positives = 609/765 (79%), Gaps = 1/765 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E +G+ +  VIEKGS+EDIFY+EEGMLPN+RGGFS+ESPLGI    G DG+V+FPWEK K
Sbjct: 159  ENKGEVRDSVIEKGSVEDIFYIEEGMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPK 218

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EEE + + S +R+ SRTSLAELTLPESELRRL NLTFQ   KT+I G GVTQAVV++IHE
Sbjct: 219  EEEKQEEGSVRRK-SRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHE 277

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            +WKTSEIVRLKIEG PALNMKRMHEILERKTGGLVIWRSGT++SLYRGVSYEVPSV+ NK
Sbjct: 278  RWKTSEIVRLKIEGPPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNK 337

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYL- 1887
             IYK+N+                   ISS  L T  DK++ D ++L  YS+V  PQE   
Sbjct: 338  RIYKKND-------------------ISSAPLPTVADKSVGDFAELASYSNVKTPQEKSE 378

Query: 1886 GTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
             T+ E+++TE + EVKYEDEV+KLLDSLGPR+ DWPGCDP PVDAD+LPGIV GYQPPFR
Sbjct: 379  NTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDADMLPGIVPGYQPPFR 438

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS L  KEATSL+RLARVLPPHFALGRSRQLQGLAVAM KLWEKS IAKIALKR
Sbjct: 439  VLPYGVRSTLGLKEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWEKSLIAKIALKR 498

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIK+LTGG +LSRNKDFLVFYRGKNFLSPDVTEAL ERERLAKSLQDE
Sbjct: 499  GVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFYRGKNFLSPDVTEALLERERLAKSLQDE 558

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA  +P++E+ +  GTAGTLGETLDA+A+WGKRLD   KE +MREA++ RHA
Sbjct: 559  EEQARLRASAMFIPNVEVAQHFGTAGTLGETLDADAKWGKRLD---KEKVMREADILRHA 615

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            +L+                    LSKVE  LKP+++Q DPESITDEERFMFRKLGLRMKA
Sbjct: 616  HLVRKLERKLSFAERKLMRAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGLRMKA 675

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGTVENMHLHWKYREL+KI+V  KTF+Q K IALALEAESGGVLVSVDK+
Sbjct: 676  FLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKTFEQVKNIALALEAESGGVLVSVDKV 735

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SK +A+IVYRGKDY RPSTLRPKNLLTKRKALARSIELQRQEALLKH++ +++ V  LRS
Sbjct: 736  SKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIELQRQEALLKHISAVQSKVDTLRS 795

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
            EIEQ++SVK+ GDE LY+KLDS+Y T          +AYLETY+  N+ EDE   S+ N 
Sbjct: 796  EIEQMDSVKDQGDEALYNKLDSSYPT--DDEDSEEVDAYLETYNRENEGEDEGNYSICNP 853

Query: 446  LTESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDN 312
              E++FPY  ++ +S+T L   +   +AVP+ S    D  E  D+
Sbjct: 854  QLETNFPYF-ENQDSQTELEVPQHHLHAVPTNSYAGLDQDEEHDS 897



 Score = 56.2 bits (134), Expect(2) = 0.0
 Identities = 34/86 (39%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
 Frame = -3

Query: 2914 HFFY---HNFSSNVSIEQNPPRKFCSLTT----SKDNNANLCSSSSWLVKWNKPDKYNRV 2756
            H FY   +  SS ++ EQNP RK   +      S+       SSSSW+ KWN+  K+NR 
Sbjct: 44   HTFYATHYTISSTLNPEQNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNRP 103

Query: 2755 KPPQAAVNYRKNDV-NLSGLGFGRSD 2681
            KPP+A ++Y+ ++  NLSG G+   D
Sbjct: 104  KPPRAVLDYQSSESGNLSGSGYAEGD 129


>ref|XP_012473005.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Gossypium raimondii]
            gi|763754573|gb|KJB21904.1| hypothetical protein
            B456_004G020400 [Gossypium raimondii]
          Length = 853

 Score =  998 bits (2581), Expect(2) = 0.0
 Identities = 521/736 (70%), Positives = 595/736 (80%), Gaps = 2/736 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E++ ++ ++VIE+GSIED+FYVEEGMLPN RGGFSKESPLG+  E GSDGE+ FPWEKRK
Sbjct: 143  EQKEEQPRKVIERGSIEDMFYVEEGMLPNTRGGFSKESPLGMETEFGSDGEIMFPWEKRK 202

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE+ EGKW+A R  ++ SLAELTLPESELRRLRNLTF+T SK +I GAGVTQ VVD IHE
Sbjct: 203  EEQEEGKWTA-RGDNKASLAELTLPESELRRLRNLTFRTKSKMRIKGAGVTQEVVDTIHE 261

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKT EIVRLK+EGAPALNMKRMHEILERKTGGLVIWRSGT++SLYRGVSYEVPSV  NK
Sbjct: 262  KWKTMEIVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVPSVHLNK 321

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNE+                   S+ S    +DKT +DPS L  + DV  PQ    
Sbjct: 322  QIYKRNEM-------------------STYSSPLVSDKT-EDPSGLVPHKDVAPPQSNSE 361

Query: 1883 TAAEQQE-TEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
            TA E+ + TE +PE+KYEDEV+KLL+ LGPRY DWPGCDP PVDADLLPGIV GYQPPFR
Sbjct: 362  TATEEHKNTEPLPEIKYEDEVDKLLEGLGPRYADWPGCDPLPVDADLLPGIVPGYQPPFR 421

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS+L  KEATSL+RLARVLPPHFA+GRSRQLQGLAVAM KLWEKSSIAKIALKR
Sbjct: 422  VLPYGVRSSLGVKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMTKLWEKSSIAKIALKR 481

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAED+KKLTGG LLSRNKDFLVFYRGKNFLS DV EAL ERERLAKSLQD 
Sbjct: 482  GVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSADVAEALLERERLAKSLQDV 541

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA    S E+ E+SG AGTLGETLDA+ARWGKRLD  HKE +++EAE+ RHA
Sbjct: 542  EEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARWGKRLDDHHKEKVLKEAEILRHA 601

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL+                    LSKVE +LKPA+RQ DPESITDEERFMFRKLGLRMKA
Sbjct: 602  NLVRKLEKNLAFAERKLLKAERALSKVEDYLKPADRQADPESITDEERFMFRKLGLRMKA 661

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGT+ENMHLHWKYREL+KII+K K FDQ KK+A+ALEAESGGVLVSVDKI
Sbjct: 662  FLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQVKKVAIALEAESGGVLVSVDKI 721

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SKGYA+IVYRGKDY+RPST+RPKNLLTKR+ALARSIELQR+EAL+KH++ L+  V +LRS
Sbjct: 722  SKGYAIIVYRGKDYERPSTIRPKNLLTKRRALARSIELQRREALVKHISALQAKVEKLRS 781

Query: 626  EIEQINSVKNTGDEELYDKLDSAY-ATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHN 450
            EI+Q++S+   GDEE YD+LDS+Y +           EAYL TY G ND E+E++    +
Sbjct: 782  EIDQMHSMDARGDEEFYDRLDSSYPSDDDDDTEEEGDEAYLGTYDGENDGEEEND----D 837

Query: 449  LLTESDFPYHAQDLES 402
            L  E++FP+H Q  ES
Sbjct: 838  LHLETNFPFHNQHQES 853



 Score = 50.8 bits (120), Expect(2) = 0.0
 Identities = 30/75 (40%), Positives = 37/75 (49%)
 Frame = -3

Query: 2902 HNFSSNVSIEQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRK 2723
            H  +SN  I  NP  K  +  T          SS+WL  WNK  K N  KPP+   NYRK
Sbjct: 52   HAITSNAQIHPNPESKTKAFPTF---------SSNWLDNWNKTHKRNGPKPPKTVFNYRK 102

Query: 2722 NDVNLSGLGFGRSDS 2678
             D NL  L + +SD+
Sbjct: 103  -DGNLWSLSYSKSDN 116


>gb|KHG05234.1| Chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Gossypium arboreum]
          Length = 853

 Score =  996 bits (2576), Expect(2) = 0.0
 Identities = 520/736 (70%), Positives = 594/736 (80%), Gaps = 2/736 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E++ ++ ++VIE+GSIED+FYVEEGMLPN RGGFSKESPLG+  E GSDGE+ FPWEKRK
Sbjct: 143  EQKEEQPRKVIERGSIEDMFYVEEGMLPNTRGGFSKESPLGMETEFGSDGEIMFPWEKRK 202

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE+ EGKW+A R  ++ SLAELTLPESELRRLRNLTF+T SK +I GAGVTQ VVD IHE
Sbjct: 203  EEQEEGKWTA-RGDNKASLAELTLPESELRRLRNLTFRTKSKMRIKGAGVTQEVVDTIHE 261

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKT EIVRLK+EGAPALNMKRMHEILERKTGGLVIWRSGT++SLYRGVSYEVPSV  NK
Sbjct: 262  KWKTMEIVRLKVEGAPALNMKRMHEILERKTGGLVIWRSGTSISLYRGVSYEVPSVHLNK 321

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNE+                   S+ S    +DKT +DPS L  + DV  PQ    
Sbjct: 322  QIYKRNEM-------------------STYSSPLVSDKT-EDPSDLVPHKDVAPPQTNSE 361

Query: 1883 TAAEQQE-TEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
            TA E+ + TE +PE+KYEDEV+KLL+ LGPRY DWPGCDP PVDADLLPGIV GYQPPFR
Sbjct: 362  TATEEHKNTEPLPEIKYEDEVDKLLEGLGPRYADWPGCDPLPVDADLLPGIVPGYQPPFR 421

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS+L  KEATSL+RLARVLPPHFALGRSRQLQGLAVAM KLWEKSSIAKIALKR
Sbjct: 422  VLPYGVRSSLGVKEATSLRRLARVLPPHFALGRSRQLQGLAVAMTKLWEKSSIAKIALKR 481

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAED+KKLTGG LLSRNKDFLVFYRGKNFLS DV EAL ERERLAKSLQD 
Sbjct: 482  GVQLTTSERMAEDLKKLTGGILLSRNKDFLVFYRGKNFLSADVAEALLERERLAKSLQDV 541

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA    S E+ E+SG AGTLGETLDA+ARWGKRLD  HKE +++EAE+ RHA
Sbjct: 542  EEQARLRASALFAQSTEVAEQSGAAGTLGETLDADARWGKRLDDHHKEKVLKEAEILRHA 601

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL+                    LSKVE +LKPA+RQ DPESITDEERFMFRKLGLRMKA
Sbjct: 602  NLVRKLEKNLAFAERKLLKAEQALSKVEDYLKPADRQADPESITDEERFMFRKLGLRMKA 661

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGT+ENMHLHWKYREL+KII+K K FDQ KK+A+ALEAESGGVLVSVDKI
Sbjct: 662  FLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKNFDQVKKVAIALEAESGGVLVSVDKI 721

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SKGYA+IVYRG DY+RPST+RPKNLLTKR+ALARSIELQR+EAL+KH++ L+  V ++RS
Sbjct: 722  SKGYAIIVYRGNDYERPSTIRPKNLLTKRRALARSIELQRREALVKHISALQAKVEKIRS 781

Query: 626  EIEQINSVKNTGDEELYDKLDSAY-ATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHN 450
            EI+Q++S+   GDEE YD+LDS+Y +           EAYL TY G ND E+E++    +
Sbjct: 782  EIDQMHSMDARGDEEFYDRLDSSYPSDDDDDTEEEGDEAYLGTYDGENDGEEEND----D 837

Query: 449  LLTESDFPYHAQDLES 402
            L  E++FP+H Q  ES
Sbjct: 838  LHLETNFPFHNQHQES 853



 Score = 50.4 bits (119), Expect(2) = 0.0
 Identities = 30/75 (40%), Positives = 36/75 (48%)
 Frame = -3

Query: 2902 HNFSSNVSIEQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRK 2723
            H  +SN  I  NP  K     T          SS+WL  WNK  K N  KPP+   NYRK
Sbjct: 52   HTITSNSQIHPNPESKTKGFPTF---------SSNWLDNWNKTHKRNGPKPPKTVFNYRK 102

Query: 2722 NDVNLSGLGFGRSDS 2678
             D NL  L + +SD+
Sbjct: 103  -DGNLWSLSYSKSDN 116


>ref|XP_008391092.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Malus domestica]
          Length = 894

 Score =  990 bits (2559), Expect(2) = 0.0
 Identities = 518/765 (67%), Positives = 606/765 (79%), Gaps = 1/765 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E +G+ ++RVIEKGS+EDIFYVEEGMLPN+RGGFS ESPLGI    GSDG+V+FPWEK  
Sbjct: 148  EGKGEARERVIEKGSVEDIFYVEEGMLPNSRGGFSAESPLGIENVFGSDGKVRFPWEKPA 207

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EEE + + S +R+ SRTS+AELTLPESELRRLRNLTFQ   KTKI GAGVTQAVVD+IHE
Sbjct: 208  EEEKQDZGSVRRK-SRTSVAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVDMIHE 266

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            +WKTSEIVRLK+EG PALNMKRMHEILERKTGGLV+WRSGT++SLYRGVSYEVPSVQ NK
Sbjct: 267  RWKTSEIVRLKVEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNK 326

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYL- 1887
             IYK+ E+ SS+                  S     DK++ D  +L  Y +V  PQE   
Sbjct: 327  RIYKKKEISSST------------------SFPNVADKSLGDFVELASYGNVNTPQEKPE 368

Query: 1886 GTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
             T+ E+++T+ +PEVKYEDEV+KLLDSLGPR+ DWPGCDP PVDAD+LPG+V GY+PPFR
Sbjct: 369  STSLEKKDTDQLPEVKYEDEVDKLLDSLGPRFKDWPGCDPLPVDADMLPGLVPGYEPPFR 428

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGV S+L  +EATSL+RLARVLPPHFALGRSRQLQGLAVAM KLWE+S IAKIALKR
Sbjct: 429  VLPYGVXSSLGLQEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWERSLIAKIALKR 488

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIK+LTGG LLSRNKDFLVFYRGKNFLSP+VTEAL ERERLAKSLQDE
Sbjct: 489  GVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEVTEALLERERLAKSLQDE 548

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA V+P++E  +  GTAGTL ETLDA+A+WGK +D+ HK+ +M+EA++ RHA
Sbjct: 549  EEQARLRASAMVIPNVEQAQHFGTAGTLAETLDADAKWGKMMDNHHKKKVMQEADILRHA 608

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL+                    LSKVE  LKP+  Q DP+SITDEERFMFRKLGLRMKA
Sbjct: 609  NLVRKLERKLAFAERKLMKAEQALSKVEECLKPSTLQADPDSITDEERFMFRKLGLRMKA 668

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGTVENMHLHWKYREL+KI+V  K+F+Q KKIALALEAESGGVLVSVDK+
Sbjct: 669  FLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQVKKIALALEAESGGVLVSVDKV 728

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SK +A+IVYRGKDY RPSTLRPKNLLTKRKALARSIE+QRQEALLKH++ +++ V  LRS
Sbjct: 729  SKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEIQRQEALLKHISXVQSKVDTLRS 788

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
            EIEQ++ VK  GDE LY+KLDS+Y T          + YLETYS  ++ EDE   S H+ 
Sbjct: 789  EIEQMDVVKERGDEVLYNKLDSSYPT-DDDDDSEEEDVYLETYSXEDNGEDEGNYSTHDP 847

Query: 446  LTESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDN 312
              E++FPYH Q+  S+T L   +   +A P  S    D Q+ EDN
Sbjct: 848  HLETNFPYHIQNQASQTELEVPQQYVHARPEGS-LDDDYQDEEDN 891



 Score = 55.5 bits (132), Expect(2) = 0.0
 Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
 Frame = -3

Query: 2914 HFFYHNFSSNVSIEQNPPRKFCSLTTSKD-----NNANLCSSSSWLVKWNKPDKYNRVKP 2750
            H FY   S   S +QNP RK   +  ++         NLC+SS W+ KWN+  K NR+KP
Sbjct: 46   HTFYATHSIISSPDQNPVRKSNFVGRNRSIYQYKPXRNLCTSS-WIDKWNESHKRNRLKP 104

Query: 2749 PQAAVNYRKNDV-NLSGLGFG 2690
            PQA ++Y+ ++  NLSG G G
Sbjct: 105  PQAVLDYQSSESGNLSGSGNG 125


>ref|XP_011030574.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Populus euphratica]
          Length = 894

 Score =  975 bits (2520), Expect(2) = 0.0
 Identities = 518/772 (67%), Positives = 602/772 (77%), Gaps = 7/772 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E + + ++RVIEKGS+EDIFYVEEGMLPNARGGFSKESPLG+ +   SDGEV+FPWEK K
Sbjct: 130  ENKERMQERVIEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPK 189

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            +EE EGKW+A+ + SRTSLAELTLPESELRRLRNLT+ T SKT++ G GVTQ VVD IH+
Sbjct: 190  KEEDEGKWTARSK-SRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHD 248

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEI R+K+EGAPALNMKRMHEILE+KTGGLVIWRSG  VSLYRGVSYE P+++  K
Sbjct: 249  KWKTSEIARVKVEGAPALNMKRMHEILEKKTGGLVIWRSGATVSLYRGVSYEDPALKWKK 308

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQ---E 1893
             I+K+ E                    SSN L  AT  TI   SK    +++ AP+   E
Sbjct: 309  RIFKKKET-------------------SSNFLPAATSITIGSQSKHSPDNEIHAPRPKTE 349

Query: 1892 YLGTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPP 1713
                AA Q+ETE   + KYEDEV+KLLD LGPRYTDWPG DP PVDAD+LPG++ GYQPP
Sbjct: 350  INVEAANQKETETQTDAKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPP 409

Query: 1712 FRVLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIAL 1533
            FR+LPYGVR  L R+++TSL+RLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSI K+AL
Sbjct: 410  FRILPYGVRPTLGRQDSTSLRRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIVKVAL 469

Query: 1532 KRGVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQ 1353
            KRGVQLTTSERMAEDIKKLTGG LLSRNKDFLVFYRGK+FLSP+VTEAL ERERLAKSLQ
Sbjct: 470  KRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVTEALLERERLAKSLQ 529

Query: 1352 DEEEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRR 1173
            DEEE+ARLRASA V+P+ EI E+SG AG+L ETLDA+A+WGKRLD  HKE ++REAE+ R
Sbjct: 530  DEEEQARLRASALVIPNDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEMVR 589

Query: 1172 HANLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRM 993
            HA+++                    L+KVE FL P+ERQ DPESITDEERFMFRKLGLRM
Sbjct: 590  HASIVRRLEKKLAFAQRKLRRAERALNKVEGFLNPSERQADPESITDEERFMFRKLGLRM 649

Query: 992  KAFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVD 813
            KAFLLLGRRGVFDGTVENMHLHWKYREL+KII+K K+F+Q KKIALALEAESGGVLVSVD
Sbjct: 650  KAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVD 709

Query: 812  KISKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRL 633
            KISKGYA+IVYRGKDYQRPS LRPKNLLTKRKALARSIE+QR EAL  HV+ LE  V ++
Sbjct: 710  KISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKI 769

Query: 632  RSEIEQINSVKNTGDEELYDKLDSAYAT--XXXXXXXXXXEAYLETYSGGN--DHEDESE 465
            RSEIEQ+  VK+ GDEELYD+LDSAY T            EAYLETY+  N  D++DE++
Sbjct: 770  RSEIEQMGIVKDKGDEELYDRLDSAYLTDDDADDTEDEGDEAYLETYNSENDVDYDDETD 829

Query: 464  NSVHNLLTESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDNG 309
            ++VHN   +++   + Q  ESET   D   +   +       TD  E++D G
Sbjct: 830  STVHNAHLDTNLLNNVQIQESETVPEDYYGDEVYL------GTDDSESDDRG 875



 Score = 63.5 bits (153), Expect(2) = 0.0
 Identities = 28/60 (46%), Positives = 36/60 (60%)
 Frame = -3

Query: 2875 EQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRKNDVNLSGLG 2696
            ++NPPRK  +  T K    NL + SSW   WNKP+K N  +PPQA  +YR N+   SG G
Sbjct: 49   DKNPPRKSTAFPTDKPKTLNLSTGSSWFFNWNKPNKQNLPRPPQAVFDYRSNNSISSGSG 108


>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
            gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
            3 [Theobroma cacao]
          Length = 856

 Score = 1002 bits (2591), Expect(2) = 0.0
 Identities = 522/731 (71%), Positives = 589/731 (80%), Gaps = 1/731 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E+  +E KRVIE+GSIEDIFYVEEGMLPN RGGFSKESPLG+    GSDGEV+FPWEKRK
Sbjct: 155  EKGEEEPKRVIERGSIEDIFYVEEGMLPNNRGGFSKESPLGMENVFGSDGEVRFPWEKRK 214

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            E+E EG W+A RR S+TSLAELTLPESELRRLRNLTF+T SK +I GAGVTQ VVD IHE
Sbjct: 215  EDEEEGGWTA-RRDSKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHE 273

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKT EIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGT+VSLYRGVSYEVPSV  +K
Sbjct: 274  KWKTEEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSK 333

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNE  + ++   +DK +                    D S LG + DV++PQ    
Sbjct: 334  RIYKRNETFTYALPSVSDKTK--------------------DLSSLGSHKDVVSPQANSE 373

Query: 1883 TAAE-QQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
            TAAE  ++TE +PE++YEDEV+KLL+ LGPRYTDWPGC+P PVDADLLPGIV GYQPPFR
Sbjct: 374  TAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTDWPGCNPLPVDADLLPGIVAGYQPPFR 433

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS+L  KEATSL+RLARVLPPHFA+GRSRQLQGLAVAMIKLWEKSSIAKIALKR
Sbjct: 434  VLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRSRQLQGLAVAMIKLWEKSSIAKIALKR 493

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIKKLTGG LLSRNKDFLVFYRGKNFLS DV EAL ERERLAKSLQDE
Sbjct: 494  GVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRGKNFLSADVAEALVERERLAKSLQDE 553

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASAF++PS E+ E+SG AGTLGETLDA+ARWGKRLD+ HKE +M+EAE+ RHA
Sbjct: 554  EEQARLRASAFLVPSTEVAEQSGAAGTLGETLDADARWGKRLDNHHKEKVMKEAEILRHA 613

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL+                    L+KVE +LKPA+RQ DPESITDEERFMFRKLGLRMKA
Sbjct: 614  NLVRKLDKNLAFADRKLLKAERALTKVEDYLKPADRQADPESITDEERFMFRKLGLRMKA 673

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGT+ENMHLHWKYREL+KII+K KTFDQ KK+ALALEAESGGVLVSVD+I
Sbjct: 674  FLLLGRRGVFDGTIENMHLHWKYRELVKIIMKAKTFDQVKKVALALEAESGGVLVSVDRI 733

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SKGYA+IVYRGKDYQRPST+RPKNLLTKR+ALARSIELQR+E                  
Sbjct: 734  SKGYAIIVYRGKDYQRPSTIRPKNLLTKRRALARSIELQRRE------------------ 775

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
              +Q++S++  GDEE YD+LDS+Y T          EAYLETY   ND E+E++  +HNL
Sbjct: 776  --DQMHSMEEQGDEEFYDRLDSSYPTDDDDTEEEGDEAYLETYESENDAEEENDELIHNL 833

Query: 446  LTESDFPYHAQ 414
              E+ FP+H Q
Sbjct: 834  HLETKFPFHDQ 844



 Score = 35.4 bits (80), Expect(2) = 0.0
 Identities = 25/75 (33%), Positives = 35/75 (46%)
 Frame = -3

Query: 2902 HNFSSNVSIEQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRK 2723
            +  +SN    Q P  K  +  T KD        S+WL  WNK  K    KPP+   NYRK
Sbjct: 57   YTVTSNSLFHQYPKSKTKAFPT-KDPTFR----SNWLDSWNKTHKGFGPKPPKTVFNYRK 111

Query: 2722 NDVNLSGLGFGRSDS 2678
               ++  L + +SD+
Sbjct: 112  KG-DVWSLSYSQSDN 125


>ref|XP_011030575.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Populus euphratica]
          Length = 891

 Score =  972 bits (2513), Expect(2) = 0.0
 Identities = 519/772 (67%), Positives = 601/772 (77%), Gaps = 7/772 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E + + ++RVIEKGS+EDIFYVEEGMLPNARGGFSKESPLG+ +   SDGEV+FPWEK K
Sbjct: 130  ENKERMQERVIEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPK 189

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            +EE EGKW+A+ + SRTSLAELTLPESELRRLRNLT+ T SKT++ G GVTQ VVD IH+
Sbjct: 190  KEEDEGKWTARSK-SRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHD 248

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEI R+K+EGAPALNMKRMHEILE+KTGGLVIWRSG  VSLYRGVSYE P+++  K
Sbjct: 249  KWKTSEIARVKVEGAPALNMKRMHEILEKKTGGLVIWRSGATVSLYRGVSYEDPALKWKK 308

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQ---E 1893
             I+K+ E                    SSN L  AT  TI   SK    +++ AP+   E
Sbjct: 309  RIFKKKET-------------------SSNFLPAATSITIGSQSKHSPDNEIHAPRPKTE 349

Query: 1892 YLGTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPP 1713
                AA Q+ETE   + KYEDEV+KLLD LGPRYTDWPG DP PVDAD+LPG++ GYQPP
Sbjct: 350  INVEAANQKETETQTDAKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPP 409

Query: 1712 FRVLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIAL 1533
            FR+LPYGVR  L R+++TSL+RLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSI K+AL
Sbjct: 410  FRILPYGVRPTLGRQDSTSLRRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIVKVAL 469

Query: 1532 KRGVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQ 1353
            KRGVQLTTSERMAEDIKKLTGG LLSRNKDFLVFYRGK+FLSP+VTEAL ERERLAKSLQ
Sbjct: 470  KRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVTEALLERERLAKSLQ 529

Query: 1352 DEEEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRR 1173
            DEEE+ARLRASA V+P+ EI E+SG AG+L ETLDA+A+WGKRLD  HKE ++REAE+ R
Sbjct: 530  DEEEQARLRASALVIPNDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEMVR 589

Query: 1172 HANLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRM 993
            HA+++                    L+KVE FL P+ERQ DPESITDEERFMFRKLGLRM
Sbjct: 590  HASIVRRLEKKLAFAQRKLRRAERALNKVEGFLNPSERQADPESITDEERFMFRKLGLRM 649

Query: 992  KAFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVD 813
            KAFLLLGRRGVFDGTVENMHLHWKYREL+KII+K K+F+Q KKIALALEAESGGVLVSVD
Sbjct: 650  KAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVD 709

Query: 812  KISKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRL 633
            KISKGYA+IVYRGKDYQRPS LRPKNLLTKRKALARSIE+QR EAL  HV+ LE  V ++
Sbjct: 710  KISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKI 769

Query: 632  RSEIEQINSVKNTGDEELYDKLDSAYAT--XXXXXXXXXXEAYLETYSGGN--DHEDESE 465
            RSEIEQ+  VK+ GDEELYD+LDSAY T            EAYLETY+  N  D++DE++
Sbjct: 770  RSEIEQMGIVKDKGDEELYDRLDSAYLTDDDADDTEDEGDEAYLETYNSENDVDYDDETD 829

Query: 464  NSVHNLLTESDFPYHAQDLESETALPDSKAEAYAVPSLSCTSTDIQENEDNG 309
            ++VHN   +++   + Q  ESET       E Y         TD  E++D G
Sbjct: 830  STVHNAHLDTNLLNNVQIQESETDYYGD--EVY-------LGTDDSESDDRG 872



 Score = 63.5 bits (153), Expect(2) = 0.0
 Identities = 28/60 (46%), Positives = 36/60 (60%)
 Frame = -3

Query: 2875 EQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRKNDVNLSGLG 2696
            ++NPPRK  +  T K    NL + SSW   WNKP+K N  +PPQA  +YR N+   SG G
Sbjct: 49   DKNPPRKSTAFPTDKPKTLNLSTGSSWFFNWNKPNKQNLPRPPQAVFDYRSNNSISSGSG 108


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  975 bits (2520), Expect(2) = 0.0
 Identities = 514/747 (68%), Positives = 595/747 (79%), Gaps = 7/747 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            E + + ++RVIEKGS+EDIFYVEEGMLPNARGGFSKESPLG+ +   SDGEV+FPWEK K
Sbjct: 130  ENKERMQERVIEKGSVEDIFYVEEGMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPK 189

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            +EE EGKW+A+ + SRTSLAELTLPESELRRLRNLT+ T SKT++ G GVTQ VVD IH+
Sbjct: 190  KEEDEGKWTARSK-SRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHD 248

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEI R+K+EGAPALNMKRMHEILE KTGGLVIWRSG  VSLYRGVSYE P+++  K
Sbjct: 249  KWKTSEIARVKVEGAPALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKK 308

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQ---E 1893
             I+K+ E                    SSNSL  AT  TI   SK    +++ AP+   E
Sbjct: 309  RIFKKKET-------------------SSNSLPAATSITIGSQSKNSPDNEIHAPRPKTE 349

Query: 1892 YLGTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPP 1713
                AA Q+ET+   +VKYEDEV+KLLD LGPRYTDWPG DP PVDAD+LPG++ GYQPP
Sbjct: 350  INVEAANQKETKTQTDVKYEDEVDKLLDGLGPRYTDWPGLDPLPVDADMLPGVIPGYQPP 409

Query: 1712 FRVLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIAL 1533
            FR+LPYGVR  L R+++TSL+RLARVLPPHFA+GRSRQLQGLAVAMIKLWEKSSI K+AL
Sbjct: 410  FRILPYGVRPTLGRQDSTSLRRLARVLPPHFAVGRSRQLQGLAVAMIKLWEKSSIVKVAL 469

Query: 1532 KRGVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQ 1353
            KRGVQLTTSERMAEDIKKLTGG LLSRNKDFLVFYRGK+FLSP+V+EAL ERERLAKSLQ
Sbjct: 470  KRGVQLTTSERMAEDIKKLTGGLLLSRNKDFLVFYRGKDFLSPEVSEALLERERLAKSLQ 529

Query: 1352 DEEEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRR 1173
            DEEE+ARLRASA V+PS EI E+SG AG+L ETLDA+A+WGKRLD  HKE ++REAE+ R
Sbjct: 530  DEEEQARLRASALVIPSDEIMEESGIAGSLEETLDADAKWGKRLDDCHKEKIIREAEIVR 589

Query: 1172 HANLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRM 993
            HA+++                    L+KVE FLKP+ERQ DPESITDEERFMFRKLGLRM
Sbjct: 590  HASIVRRLEKKLAFAQRKLRRAERTLNKVEGFLKPSERQADPESITDEERFMFRKLGLRM 649

Query: 992  KAFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVD 813
            KAFLLLGRRGVFDGTVENMHLHWKYREL+KII+K K+F+Q KKIALALEAESGGVLVSVD
Sbjct: 650  KAFLLLGRRGVFDGTVENMHLHWKYRELVKIILKAKSFEQVKKIALALEAESGGVLVSVD 709

Query: 812  KISKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRL 633
            KISKGYA+IVYRGKDYQRPS LRPKNLLTKRKALARSIE+QR EAL  HV+ LE  V ++
Sbjct: 710  KISKGYAIIVYRGKDYQRPSMLRPKNLLTKRKALARSIEIQRSEALQNHVSALEIKVEKI 769

Query: 632  RSEIEQINSVKNTGDEELYDKLDSAYAT--XXXXXXXXXXEAYLETYSGGN--DHEDESE 465
            RSEIEQ+  VK+ GDEELYD+LDSAY T            EAYLETY+  N  D++DE++
Sbjct: 770  RSEIEQMGFVKDKGDEELYDRLDSAYLTDDDADDSEDEGDEAYLETYNSENDVDYDDETD 829

Query: 464  NSVHNLLTESDFPYHAQDLESETALPD 384
            ++VHN   +++   + Q  ESET   D
Sbjct: 830  STVHNAHLDTNLLNNVQIQESETEPED 856



 Score = 60.1 bits (144), Expect(2) = 0.0
 Identities = 27/60 (45%), Positives = 34/60 (56%)
 Frame = -3

Query: 2875 EQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAVNYRKNDVNLSGLG 2696
            ++NP  K  S  T K    NL + SSW   WNKP+K N  + PQA  +YR N+ N SG G
Sbjct: 49   DKNPSTKSTSFPTDKSKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSNSSGSG 108


>ref|XP_008362021.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Malus domestica]
          Length = 882

 Score =  986 bits (2549), Expect(2) = 0.0
 Identities = 514/750 (68%), Positives = 598/750 (79%), Gaps = 1/750 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            + +G+ + RVIEKGS+EDIFYVEEGMLPN+RG FS +SPLG+    GSDG+V FPWEK  
Sbjct: 147  DSKGEVRGRVIEKGSVEDIFYVEEGMLPNSRGRFSADSPLGVENVFGSDGKVXFPWEKPA 206

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EEE + + S +R+ SRTS+AELTLPESELRRLRNLTFQ   KT+I GAGVTQAVVD+IHE
Sbjct: 207  EEEKQEEGSVRRK-SRTSVAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQAVVDMIHE 265

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            +WKTSEIVRLK+EG PALNMKRMHEILERKTGGLV+WRSGT++SLYRGVSYEVPSVQ NK
Sbjct: 266  RWKTSEIVRLKVEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNK 325

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYL- 1887
             IYK+N+                    SS SL T  DK + D  ++  Y +V  PQE L 
Sbjct: 326  RIYKKNDS-------------------SSASLPTVADKXVGDFVEIASYXNVNTPQEKLE 366

Query: 1886 GTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
             T  E+++TE +PEVKYEDEV++LLD LGPR+ DWPGCDP PVDAD+LPGIV GY+PPFR
Sbjct: 367  STFLEKKDTEQLPEVKYEDEVDELLDXLGPRFKDWPGCDPLPVDADMLPGIVPGYEPPFR 426

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS+L  +EATSL+RLARVLPPHFALGRSRQLQGLAVAM KLWE+S I KIALKR
Sbjct: 427  VLPYGVRSSLGLQEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWERSLIXKIALKR 486

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIK+LTGG LLSRNKDFLVFYRGKNFLSP+VTEAL ERERLAKSLQDE
Sbjct: 487  GVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEVTEALLERERLAKSLQDE 546

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA V+P++E  +  GTAGTLGETLDA+A+WGKR+D+ HK+ +M+EA++ RH+
Sbjct: 547  EEQARLRASAMVIPNVEQAQHFGTAGTLGETLDADAKWGKRMDNHHKKKVMQEADILRHS 606

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL                     LSKVE  LKP+  Q DP+SITDEERFMFRKLGLRMKA
Sbjct: 607  NLXRKLERKLAFAERKLMKAEQALSKVEECLKPSMXQADPDSITDEERFMFRKLGLRMKA 666

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGTVENMHLHWKYREL+KI+V  K+F+Q KKIALALEAESGGVLVSVDK+
Sbjct: 667  FLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQVKKIALALEAESGGVLVSVDKV 726

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SK +A+IVYRGKDY RPSTLRPKNLLTKRKALARSIE+QRQEALLKH++ +++ V  LRS
Sbjct: 727  SKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEIQRQEALLKHISVVQSKVDTLRS 786

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
            EIEQ+++VK  GDE LYDKLDS+Y T          + YLETYS  ND EDE   S H+ 
Sbjct: 787  EIEQMDAVKEHGDEVLYDKLDSSYPT-DDDDDSEEEDVYLETYSAENDGEDEGNYSTHDP 845

Query: 446  LTESDFPYHAQDLESETALPDSKAEAYAVP 357
              ES FP++ Q+ +S+T L   +   YAVP
Sbjct: 846  HLESIFPFNIQNEDSQTELEVPRQHLYAVP 875



 Score = 48.9 bits (115), Expect(2) = 0.0
 Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
 Frame = -3

Query: 2917 NHFFYHN---FSSNVSIEQNPPRKFCSLTTSKDN-----NANLCSSSSWLVKWNKPDKYN 2762
            NH FY      SS ++ + NP RK   +  ++         NLCSSS W+ KWN+  K+N
Sbjct: 43   NHTFYTTHCIISSPLNPDPNPMRKSNFVGRNRPVYQCKLKRNLCSSS-WINKWNESHKHN 101

Query: 2761 RVKPPQAAVNYRKND-VNLSGLGFG 2690
            R KPP+A ++Y+ ++  N SG G G
Sbjct: 102  RPKPPRAVLDYQSSEGGNGSGNGGG 126


>ref|XP_008362022.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Malus domestica]
          Length = 864

 Score =  986 bits (2549), Expect(2) = 0.0
 Identities = 514/750 (68%), Positives = 598/750 (79%), Gaps = 1/750 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            + +G+ + RVIEKGS+EDIFYVEEGMLPN+RG FS +SPLG+    GSDG+V FPWEK  
Sbjct: 129  DSKGEVRGRVIEKGSVEDIFYVEEGMLPNSRGRFSADSPLGVENVFGSDGKVXFPWEKPA 188

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EEE + + S +R+ SRTS+AELTLPESELRRLRNLTFQ   KT+I GAGVTQAVVD+IHE
Sbjct: 189  EEEKQEEGSVRRK-SRTSVAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQAVVDMIHE 247

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            +WKTSEIVRLK+EG PALNMKRMHEILERKTGGLV+WRSGT++SLYRGVSYEVPSVQ NK
Sbjct: 248  RWKTSEIVRLKVEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNK 307

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYL- 1887
             IYK+N+                    SS SL T  DK + D  ++  Y +V  PQE L 
Sbjct: 308  RIYKKNDS-------------------SSASLPTVADKXVGDFVEIASYXNVNTPQEKLE 348

Query: 1886 GTAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFR 1707
             T  E+++TE +PEVKYEDEV++LLD LGPR+ DWPGCDP PVDAD+LPGIV GY+PPFR
Sbjct: 349  STFLEKKDTEQLPEVKYEDEVDELLDXLGPRFKDWPGCDPLPVDADMLPGIVPGYEPPFR 408

Query: 1706 VLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKR 1527
            VLPYGVRS+L  +EATSL+RLARVLPPHFALGRSRQLQGLAVAM KLWE+S I KIALKR
Sbjct: 409  VLPYGVRSSLGLQEATSLRRLARVLPPHFALGRSRQLQGLAVAMAKLWERSLIXKIALKR 468

Query: 1526 GVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDE 1347
            GVQLTTSERMAEDIK+LTGG LLSRNKDFLVFYRGKNFLSP+VTEAL ERERLAKSLQDE
Sbjct: 469  GVQLTTSERMAEDIKRLTGGVLLSRNKDFLVFYRGKNFLSPEVTEALLERERLAKSLQDE 528

Query: 1346 EEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHA 1167
            EE+ARLRASA V+P++E  +  GTAGTLGETLDA+A+WGKR+D+ HK+ +M+EA++ RH+
Sbjct: 529  EEQARLRASAMVIPNVEQAQHFGTAGTLGETLDADAKWGKRMDNHHKKKVMQEADILRHS 588

Query: 1166 NLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKA 987
            NL                     LSKVE  LKP+  Q DP+SITDEERFMFRKLGLRMKA
Sbjct: 589  NLXRKLERKLAFAERKLMKAEQALSKVEECLKPSMXQADPDSITDEERFMFRKLGLRMKA 648

Query: 986  FLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDKI 807
            FLLLGRRGVFDGTVENMHLHWKYREL+KI+V  K+F+Q KKIALALEAESGGVLVSVDK+
Sbjct: 649  FLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKSFEQVKKIALALEAESGGVLVSVDKV 708

Query: 806  SKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLRS 627
            SK +A+IVYRGKDY RPSTLRPKNLLTKRKALARSIE+QRQEALLKH++ +++ V  LRS
Sbjct: 709  SKKFAIIVYRGKDYHRPSTLRPKNLLTKRKALARSIEIQRQEALLKHISVVQSKVDTLRS 768

Query: 626  EIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHNL 447
            EIEQ+++VK  GDE LYDKLDS+Y T          + YLETYS  ND EDE   S H+ 
Sbjct: 769  EIEQMDAVKEHGDEVLYDKLDSSYPT-DDDDDSEEEDVYLETYSAENDGEDEGNYSTHDP 827

Query: 446  LTESDFPYHAQDLESETALPDSKAEAYAVP 357
              ES FP++ Q+ +S+T L   +   YAVP
Sbjct: 828  HLESIFPFNIQNEDSQTELEVPRQHLYAVP 857



 Score = 48.5 bits (114), Expect(2) = 0.0
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
 Frame = -3

Query: 2917 NHFFYHN---FSSNVSIEQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPP 2747
            NH FY      SS ++ + NP R  CS              SSW+ KWN+  K+NR KPP
Sbjct: 43   NHTFYTTHCIISSPLNPDPNPMRNLCS--------------SSWINKWNESHKHNRPKPP 88

Query: 2746 QAAVNYRKND-VNLSGLGFG 2690
            +A ++Y+ ++  N SG G G
Sbjct: 89   RAVLDYQSSEGGNGSGNGGG 108


>gb|KDO45880.1| hypothetical protein CISIN_1g002316mg [Citrus sinensis]
          Length = 715

 Score =  895 bits (2312), Expect(2) = 0.0
 Identities = 461/545 (84%), Positives = 488/545 (89%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDGEVKFPWEKRK 2424
            ERRGQ K+RVIEKGSIEDIFYVEEG+LPNARGGFSKESPLG+GEEVGSDGEVKFPWEKRK
Sbjct: 171  ERRGQGKERVIEKGSIEDIFYVEEGLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRK 230

Query: 2423 EEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIHE 2244
            EE AEG+W  KRR+SRTSLAELTLPESELRRLRNLTFQT SKT+I GAG+TQAVVD+IHE
Sbjct: 231  EEVAEGRWLVKRRSSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHE 290

Query: 2243 KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPNK 2064
            KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQ NK
Sbjct: 291  KWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQLNK 350

Query: 2063 WIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYLG 1884
             IYKRNELP+SSVSQATDKQ +K+I +S NSLS A DKT QDPS    Y++V A Q  L 
Sbjct: 351  RIYKRNELPASSVSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLE 410

Query: 1883 TAAEQQETEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPFRV 1704
            TA+E+QET+++ EVKYEDEVEKLLD LGPRYTDWPGCDP PVDAD+LPGIV GYQPPFRV
Sbjct: 411  TASEEQETDFVREVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRV 470

Query: 1703 LPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 1524
            LPYGVRS LARKEAT+LQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG
Sbjct: 471  LPYGVRSTLARKEATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRG 530

Query: 1523 VQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 1344
            VQLTTSERM EDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE
Sbjct: 531  VQLTTSERMVEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEE 590

Query: 1343 EEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRHAN 1164
            E+ARLRASAFVLPSIE  EKSGTAGTL ETLDAN+RWGKRLD SHKEN++REAEVRRHA 
Sbjct: 591  EQARLRASAFVLPSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAY 650

Query: 1163 LIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMKAF 984
            L+                    LSKVE  LKPAERQ DPESITDEERFMFRKLGLRMKAF
Sbjct: 651  LVQKLEKKLARAERKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAF 710

Query: 983  LLLGR 969
            LLLG+
Sbjct: 711  LLLGK 715



 Score =  130 bits (326), Expect(2) = 0.0
 Identities = 61/87 (70%), Positives = 72/87 (82%), Gaps = 7/87 (8%)
 Frame = -3

Query: 2917 NHFFYHNFSSNVSIEQNPPRKFCSLTTS-------KDNNANLCSSSSWLVKWNKPDKYNR 2759
            N FFY NFSSN + E+NPPRK CS +T+       KD+NANLCSSSSWLVKWNKP+KYNR
Sbjct: 44   NRFFYQNFSSNSAHEKNPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNR 103

Query: 2758 VKPPQAAVNYRKNDVNLSGLGFGRSDS 2678
            +KPPQA+VNYRKN+V+LS LGF R+DS
Sbjct: 104  LKPPQASVNYRKNNVDLSALGFARTDS 130


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  978 bits (2527), Expect(2) = 0.0
 Identities = 516/729 (70%), Positives = 585/729 (80%), Gaps = 2/729 (0%)
 Frame = -2

Query: 2603 ERRGQEKKRVIEKGSIEDIFYVEEGMLPNARGGFSKESPLGIGEEVGSDG-EVKFPWEKR 2427
            E RG+ ++RVIEKGS+EDIFYVEEGMLPN+RGGFS  SPLG  +  G  G EV+FPWEK 
Sbjct: 141  EGRGEVRERVIEKGSVEDIFYVEEGMLPNSRGGFSGVSPLGTEDVFGDGGGEVRFPWEKP 200

Query: 2426 KEEEAEGKWSAKRRTSRTSLAELTLPESELRRLRNLTFQTNSKTKITGAGVTQAVVDLIH 2247
            +E E E   S +RR SRTSLAELTLPESELRRLRNLTFQ   KTKI GAGVTQAVV++IH
Sbjct: 201  REREKEEGGSIRRR-SRTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIH 259

Query: 2246 EKWKTSEIVRLKIEGAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSVQPN 2067
            E+WKT+EIVRLKIEG PALNMKRMHEILERKTGGLV+WRSGT++SLYRGVSYEVPSVQ N
Sbjct: 260  ERWKTAEIVRLKIEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLN 319

Query: 2066 KWIYKRNELPSSSVSQATDKQRYKRIGISSNSLSTATDKTIQDPSKLGYYSDVLAPQEYL 1887
            K I+KRNE                   ISS SL T  DK++ +P     YS+V  P E  
Sbjct: 320  KQIFKRNE-------------------ISSTSLPTVADKSVAEPYVCATYSNVKTPLEMS 360

Query: 1886 GTAAEQQE-TEYMPEVKYEDEVEKLLDSLGPRYTDWPGCDPSPVDADLLPGIVLGYQPPF 1710
              A+++ E TE +PEVKYEDEV++LLDS+GPR+ DWPGCDP PVDAD+LPGIV G+QPPF
Sbjct: 361  ENASQETEDTEQLPEVKYEDEVDELLDSIGPRFKDWPGCDPLPVDADMLPGIVPGFQPPF 420

Query: 1709 RVLPYGVRSNLARKEATSLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALK 1530
            R+LPYGVRS L  KEATSL+RLARVLPPHFALGR+RQLQGLAVAM KLWE+S IAKIALK
Sbjct: 421  RILPYGVRSTLGLKEATSLRRLARVLPPHFALGRNRQLQGLAVAMSKLWERSLIAKIALK 480

Query: 1529 RGVQLTTSERMAEDIKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQD 1350
            RGVQLTTSERMAEDIKKLTGG LLSRNKDFLVFYRGKNFLS +VTEAL ERERLAKSLQD
Sbjct: 481  RGVQLTTSERMAEDIKKLTGGVLLSRNKDFLVFYRGKNFLSAEVTEALVERERLAKSLQD 540

Query: 1349 EEEEARLRASAFVLPSIEITEKSGTAGTLGETLDANARWGKRLDHSHKENMMREAEVRRH 1170
            EEE+ARLRASA V+PSIE  +  GTAGTLGETLDA+A+WGKRLD  HKE + +EA + RH
Sbjct: 541  EEEQARLRASAMVMPSIEPAQHFGTAGTLGETLDADAKWGKRLDVHHKEKVTQEAGILRH 600

Query: 1169 ANLIXXXXXXXXXXXXXXXXXXXXLSKVEAFLKPAERQPDPESITDEERFMFRKLGLRMK 990
            A L+                    LSKVE  LKP+++Q DPESITDEERFMFRKLGL+MK
Sbjct: 601  AKLVRKLEQKLAFAERKLMGAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGLKMK 660

Query: 989  AFLLLGRRGVFDGTVENMHLHWKYRELIKIIVKVKTFDQAKKIALALEAESGGVLVSVDK 810
            AFLLLGRRGVFDGTVENMHLHWKYREL+KI+V  K FDQ KKIALALEAESGGVLVSVDK
Sbjct: 661  AFLLLGRRGVFDGTVENMHLHWKYRELVKIMVNAKNFDQVKKIALALEAESGGVLVSVDK 720

Query: 809  ISKGYAMIVYRGKDYQRPSTLRPKNLLTKRKALARSIELQRQEALLKHVATLETNVGRLR 630
            +SK YA+IVYRG DYQRPS LRPKNLLTKRKALARSIELQRQEALLKH+A +++ V RLR
Sbjct: 721  VSKKYAIIVYRGNDYQRPSMLRPKNLLTKRKALARSIELQRQEALLKHIAAVQSRVDRLR 780

Query: 629  SEIEQINSVKNTGDEELYDKLDSAYATXXXXXXXXXXEAYLETYSGGNDHEDESENSVHN 450
            SEIEQ+++VK+ GDE LY+KLDS Y T          +AYLETYS  ND E++S +SVH+
Sbjct: 781  SEIEQMDTVKHHGDEALYNKLDSCYPT-DYEDTEEEGDAYLETYSSKNDGEEDSTSSVHS 839

Query: 449  LLTESDFPY 423
               E+ F +
Sbjct: 840  TSLENQFSF 848



 Score = 45.1 bits (105), Expect(2) = 0.0
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
 Frame = -3

Query: 2914 HFFYHNFSSNVSIEQNPPRKFCSLTTSKDNNANLCSSSSWLVKWNKPDKYNRVKPPQAAV 2735
            H   +  +S+++ EQNPPRK   L        NL SS SW+ +WN   K +  + P+A +
Sbjct: 43   HATQYFITSSLTPEQNPPRKLNLLICQYKPTKNL-SSCSWIDRWNDSRKQHGPRRPRAVL 101

Query: 2734 NYRKNDV-NLSGLG 2696
            +Y+ N+  NLS  G
Sbjct: 102  DYQSNESGNLSSDG 115