BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00008189
         (2285 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   541   e-150
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   538   e-149
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   536   e-149
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   530   e-147
ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation spec...   423   e-115
ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation spec...   423   e-115
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   419   e-114
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   419   e-114
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   419   e-114
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   419   e-114
ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation spec...   418   e-113
ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   418   e-113
ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation spec...   416   e-113
ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation spec...   413   e-112
ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation spec...   410   e-111
ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Mal...   409   e-111
ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation spec...   407   e-110
ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation spec...   401   e-108
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   400   e-108
gb|KHG22501.1| Cleavage and polyadenylation specificity factor s...   394   e-106

>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  541 bits (1393), Expect = e-150
 Identities = 269/330 (81%), Positives = 283/330 (85%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MDSM EEQ+DY             QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
            FQQPEAPPPSAGVGNGRLQ +KTDVPEQ VQAG SQG  +PG SVEGKY NAG+HFPAQN
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            D QVAVNRPNMGS +YPDG+SVSQKGSVQE THD  VRNMGFQGSTSGPPRTGV+PSNMP
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSNMP 180

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
            GRV NEPA +LN            ANQ+ VN+NVNR MVNENQI+PPLENGGTMLFVGEL
Sbjct: 181  GRVANEPAPVLNPGAAGPQGALIPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGEL 240

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGRVKEIKFFDERASGKSKGYCQVEF+DAAAA ACK+GMNGHVFN
Sbjct: 241  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 300

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GR CVVAFAS QTLKQMGAS MNKNQGQPQ
Sbjct: 301  GRPCVVAFASPQTLKQMGASYMNKNQGQPQ 330



 Score =  175 bits (444), Expect = 1e-40
 Identities = 108/231 (46%), Positives = 111/231 (48%)
 Frame = -2

Query: 1030 MMHPQNMMGGFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNRX 851
            MMHPQNMMGGFDPT                       P VNAM LAG+APHVNPAFFNR 
Sbjct: 428  MMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRG 487

Query: 850  XXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEANH 671
                                MWTD SMGGW GEEH R TRE              GEANH
Sbjct: 488  MAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEANH 547

Query: 670  EKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDPX 491
            EK                RDWSGNTDRR +EEREQDW              EKDSYRD  
Sbjct: 548  EKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRR 607

Query: 490  XXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                         RG          RA+PDEDHRSRSRDVDYGKRRRLPSE
Sbjct: 608  QRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  538 bits (1385), Expect = e-149
 Identities = 268/330 (81%), Positives = 282/330 (85%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MDSM EEQ+DY             QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
            FQQPEAPPPSAGVGNGRLQ +KTDVPEQ VQAG SQG  +PG SVEGKY NAG+HFPAQN
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGKYTNAGTHFPAQN 120

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            D QVAVNRPNMGS +YPDG+SVSQKGSVQE THD  VRNMGFQGSTSGP RTGV+PSNMP
Sbjct: 121  DVQVAVNRPNMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 180

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
            GRV NEPA +LN            ANQ+ VN+NVNR MVNENQI+PPLENGGTMLFVGEL
Sbjct: 181  GRVANEPAPVLNPGAAGPQGALIPANQMGVNINVNRAMVNENQIRPPLENGGTMLFVGEL 240

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGRVKEIKFFDERASGKSKGYCQVEF+DAAAA ACK+GMNGHVFN
Sbjct: 241  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFN 300

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GR CVVAFAS QTLKQMGAS MNKNQGQPQ
Sbjct: 301  GRPCVVAFASPQTLKQMGASYMNKNQGQPQ 330



 Score =  175 bits (443), Expect = 2e-40
 Identities = 108/231 (46%), Positives = 111/231 (48%)
 Frame = -2

Query: 1030 MMHPQNMMGGFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNRX 851
            MMHPQNMMGGFDPT                       P VNAM LAG+APHVNPAFFNR 
Sbjct: 428  MMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRG 487

Query: 850  XXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEANH 671
                                MWTD SMGGW GEEH R TRE              GEANH
Sbjct: 488  MAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANH 547

Query: 670  EKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDPX 491
            EK                RDWSGNTDRR +EEREQDW              EKDSYRD  
Sbjct: 548  EKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRR 607

Query: 490  XXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                         RG          RA+PDEDHRSRSRDVDYGKRRRLPSE
Sbjct: 608  QRDRDSTYDDNWDRGPSSSRSRSRSRAIPDEDHRSRSRDVDYGKRRRLPSE 658


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  536 bits (1380), Expect = e-149
 Identities = 263/313 (84%), Positives = 275/313 (87%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G ++M YQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR
Sbjct: 15   GAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 74

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
            LQ +KTDVPEQ VQ GGSQG  IPG SVEGKY NAGSHFPAQND QVAVNRPNMGS +YP
Sbjct: 75   LQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSHFPAQNDVQVAVNRPNMGSGNYP 134

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
            DG+SVSQKGSVQE THD  VRNMGFQGSTSGP RTGV+PSNMPGRV NEPA +LN     
Sbjct: 135  DGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRVANEPAPVLNPGAAG 194

Query: 1696 XXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLSHYG 1517
                   ANQ+ VN NVNR MVNENQI+PPLENGGTMLFVGEL+WWTTDAELESVLS YG
Sbjct: 195  PQGALIPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYG 254

Query: 1516 RVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTLKQM 1337
            R KEIKFFDERASGKSKGYCQVEF+DAAAA ACK+GMNGHVFNGR CVVAFAS QTLKQM
Sbjct: 255  RAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQM 314

Query: 1336 GASSMNKNQGQPQ 1298
            GAS MNKNQGQPQ
Sbjct: 315  GASYMNKNQGQPQ 327



 Score =  177 bits (449), Expect = 4e-41
 Identities = 108/231 (46%), Positives = 111/231 (48%)
 Frame = -2

Query: 1030 MMHPQNMMGGFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNRX 851
            MMHPQNMMGGFDPT                       P VNAM LAG+APHVNPAFFNR 
Sbjct: 425  MMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRG 484

Query: 850  XXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEANH 671
                                MWTD SMGGW GEEH R TRE              GEANH
Sbjct: 485  MAANGMGMMGSSGMDGPHPGMWTDSSMGGWLGEEHGRRTRESSYGGDDGASDYGYGEANH 544

Query: 670  EKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDPX 491
            EK                RDWSGNTDRR +EEREQDW              EKDSYRD  
Sbjct: 545  EKGARSTAASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRR 604

Query: 490  XXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                         RGQ          A+PDEDHRSRSRDVDYGKRRRLPSE
Sbjct: 605  QRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  530 bits (1366), Expect = e-147
 Identities = 260/313 (83%), Positives = 273/313 (87%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G ++M YQGGGAIPALADEELMGEDDEYDDLYND+NVGDGLLQFQQPEAPPPSAGVGNGR
Sbjct: 15   GAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQPEAPPPSAGVGNGR 74

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
            LQ +KTDVPEQ VQ GGSQG  IPG SVEGKY NAGS FPAQND QVAVNRPNMGS +YP
Sbjct: 75   LQVKKTDVPEQRVQVGGSQGSNIPGVSVEGKYTNAGSDFPAQNDVQVAVNRPNMGSGNYP 134

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
            DG+SVSQKGSVQE THD  VRNMGFQGSTSGP RTGV+PSNMPGR  NEPA +LN     
Sbjct: 135  DGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMPGRAANEPAPVLNPGAAG 194

Query: 1696 XXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLSHYG 1517
                   ANQ+ VN NVNR MVNENQI+PPLENGGTMLFVGEL+WWTTDAELESVLS YG
Sbjct: 195  PQGALIPANQMGVNANVNRVMVNENQIRPPLENGGTMLFVGELHWWTTDAELESVLSQYG 254

Query: 1516 RVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTLKQM 1337
            R KEIKFFDERASGKSKGYCQVEF+DAAAA ACK+GMNGHVFNGR CVVAFAS QTLKQM
Sbjct: 255  RAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGHVFNGRPCVVAFASPQTLKQM 314

Query: 1336 GASSMNKNQGQPQ 1298
            GAS MNKNQGQPQ
Sbjct: 315  GASYMNKNQGQPQ 327



 Score =  176 bits (445), Expect = 1e-40
 Identities = 107/231 (46%), Positives = 111/231 (48%)
 Frame = -2

Query: 1030 MMHPQNMMGGFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNRX 851
            MMHPQNMMGGFDPT                       P VNAM LAG+APHVNPAFFNR 
Sbjct: 425  MMHPQNMMGGFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFNRG 484

Query: 850  XXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEANH 671
                                MWTD SMGGW GEEH R TRE              GEA+H
Sbjct: 485  MAANGMGMMGSSGMDGPHPGMWTDSSMGGWVGEEHGRRTRESSYGGDDGASDYGYGEASH 544

Query: 670  EKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDPX 491
            EK                RDWSGNTDRR +EEREQDW              EKDSYRD  
Sbjct: 545  EKGARSTTASREKDRGSERDWSGNTDRRHREEREQDWDRSERDHRDHRHREEKDSYRDRR 604

Query: 490  XXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                         RGQ          A+PDEDHRSRSRDVDYGKRRRLPSE
Sbjct: 605  QRDRDSTYDDNWDRGQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_010650880.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 isoform X2 [Vitis vinifera]
            gi|731372808|ref|XP_010650883.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185 isoform
            X2 [Vitis vinifera] gi|731372811|ref|XP_010650886.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit CG7185 isoform X2 [Vitis vinifera]
          Length = 650

 Score =  423 bits (1087), Expect = e-115
 Identities = 218/331 (65%), Positives = 246/331 (74%), Gaps = 14/331 (4%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD M EEQ+DY             QGGGAI ALAD+ELMGEDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
              + EAP PS  +  G  QA KTDVP Q ++AG SQGL IPG S+EGKY N   HF  + 
Sbjct: 61   MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKK 118

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            +  +AV  P MGS S+ DG SVSQKG V EMTHD QVRN+GFQGST  P +TG  PS++ 
Sbjct: 119  EGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVH 178

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGE 1571
            G++ NE   +LN              NQ+ +NVNVNRPMVNENQI+P ++NG TMLFVGE
Sbjct: 179  GKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGE 238

Query: 1570 LNWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVF 1391
            L+WWTTDAELESVLS YGRVKEIKFFDERASGKSKGYCQVEFYDA+AA ACKEGMNG++F
Sbjct: 239  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIF 298

Query: 1390 NGRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            NGRACVVAFAS QTLKQMGAS MNK Q Q Q
Sbjct: 299  NGRACVVAFASPQTLKQMGASYMNKTQAQSQ 329



 Score =  152 bits (383), Expect = 2e-33
 Identities = 98/232 (42%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            +MHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 422  LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGGEEH R TRE              GE N
Sbjct: 482  GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 541

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                RDWSGN++RR ++EREQDW               KD YRD 
Sbjct: 542  HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREE---KDGYRDH 598

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ         RA+ DEDHRSRSRD DYGKRRRLPSE
Sbjct: 599  RQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 650


>ref|XP_002282072.3| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            isoform X1 [Vitis vinifera]
          Length = 656

 Score =  423 bits (1087), Expect = e-115
 Identities = 218/331 (65%), Positives = 246/331 (74%), Gaps = 14/331 (4%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD M EEQ+DY             QGGGAI ALAD+ELMGEDDEYDDLYNDVNVG+G LQ
Sbjct: 7    MDPMAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQ 66

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
              + EAP PS  +  G  QA KTDVP Q ++AG SQGL IPG S+EGKY N   HF  + 
Sbjct: 67   MHRSEAPAPSGVMAGGPFQAHKTDVPPQKLEAGTSQGLIIPGVSIEGKYSNP--HFHEKK 124

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            +  +AV  P MGS S+ DG SVSQKG V EMTHD QVRN+GFQGST  P +TG  PS++ 
Sbjct: 125  EGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVH 184

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGE 1571
            G++ NE   +LN              NQ+ +NVNVNRPMVNENQI+P ++NG TMLFVGE
Sbjct: 185  GKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGE 244

Query: 1570 LNWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVF 1391
            L+WWTTDAELESVLS YGRVKEIKFFDERASGKSKGYCQVEFYDA+AA ACKEGMNG++F
Sbjct: 245  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIF 304

Query: 1390 NGRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            NGRACVVAFAS QTLKQMGAS MNK Q Q Q
Sbjct: 305  NGRACVVAFASPQTLKQMGASYMNKTQAQSQ 335



 Score =  152 bits (383), Expect = 2e-33
 Identities = 98/232 (42%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            +MHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 428  LMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAGVAPHVNPAFFGR 487

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGGEEH R TRE              GE N
Sbjct: 488  GMAANGMGMMGATGMDGHHAGMWTDTSMGGWGGEEHGRRTRESSYGGDDGASDYGYGEVN 547

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                RDWSGN++RR ++EREQDW               KD YRD 
Sbjct: 548  HEKVGRSNTASREKERGSERDWSGNSERRHRDEREQDWERSDKDHRYREE---KDGYRDH 604

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ         RA+ DEDHRSRSRD DYGKRRRLPSE
Sbjct: 605  RQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 656


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  419 bits (1078), Expect = e-114
 Identities = 209/330 (63%), Positives = 248/330 (75%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMD-------------YQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD+M EEQ+D             YQG GAIPALADEE+MGEDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
             Q+ EAP    G+G+  L+AQ+ + PE  V+AGGSQGL IPG SV+GK+PN  + +P + 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            + Q AVNRP M S SYP GSS+SQKGSV E THD QV+N+GFQG TS   + G++PS +P
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
             ++ N+PA  LN                 +  NVN P++NENQ+QPP+ENG TMLFVGEL
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPN-QMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGR+KEIKFFDE+ASGKSKGYCQVEFYD ++A  CKEGMNG++FN
Sbjct: 239  HWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFN 298

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GRACVVAFAS QTLKQMGAS MNKNQGQ Q
Sbjct: 299  GRACVVAFASPQTLKQMGASYMNKNQGQSQ 328



 Score =  113 bits (283), Expect = 7e-22
 Identities = 72/179 (40%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MMHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGG+EH R TRE              G+AN
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRD 497
            HEK                R+WSGN+DRR ++E+EQDW              EKDSYR+
Sbjct: 542  HEK-GRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYRE 599


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  419 bits (1078), Expect = e-114
 Identities = 209/330 (63%), Positives = 248/330 (75%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMD-------------YQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD+M EEQ+D             YQG GAIPALADEE+MGEDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
             Q+ EAP    G+G+  L+AQ+ + PE  V+AGGSQGL IPG SV+GK+PN  + +P + 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            + Q AVNRP M S SYP GSS+SQKGSV E THD QV+N+GFQG TS   + G++PS +P
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
             ++ N+PA  LN                 +  NVN P++NENQ+QPP+ENG TMLFVGEL
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPN-QMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGR+KEIKFFDE+ASGKSKGYCQVEFYD ++A  CKEGMNG++FN
Sbjct: 239  HWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFN 298

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GRACVVAFAS QTLKQMGAS MNKNQGQ Q
Sbjct: 299  GRACVVAFASPQTLKQMGASYMNKNQGQSQ 328



 Score =  135 bits (340), Expect = 2e-28
 Identities = 88/227 (38%), Positives = 101/227 (44%), Gaps = 1/227 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MMHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGG+EH R TRE              G+AN
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                R+WSGN+DRR ++E+EQDW              EKDSYR+ 
Sbjct: 542  HEK-GRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRR 353
                          RGQ          AMP+E+HRSRSRDV Y + +
Sbjct: 601  RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVGYREEK 647


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  419 bits (1078), Expect = e-114
 Identities = 209/330 (63%), Positives = 248/330 (75%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMD-------------YQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD+M EEQ+D             YQG GAIPALADEE+MGEDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
             Q+ EAP    G+G+  L+AQ+ + PE  V+AGGSQGL IPG SV+GK+PN  + +P + 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            + Q AVNRP M S SYP GSS+SQKGSV E THD QV+N+GFQG TS   + G++PS +P
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
             ++ N+PA  LN                 +  NVN P++NENQ+QPP+ENG TMLFVGEL
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPN-QMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGR+KEIKFFDE+ASGKSKGYCQVEFYD ++A  CKEGMNG++FN
Sbjct: 239  HWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFN 298

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GRACVVAFAS QTLKQMGAS MNKNQGQ Q
Sbjct: 299  GRACVVAFASPQTLKQMGASYMNKNQGQSQ 328



 Score =  113 bits (283), Expect = 7e-22
 Identities = 72/179 (40%), Positives = 81/179 (45%), Gaps = 1/179 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MMHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGG+EH R TRE              G+AN
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRD 497
            HEK                R+WSGN+DRR ++E+EQDW              EKDSYR+
Sbjct: 542  HEK-GRSSGASREKERVSEREWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYRE 599


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  419 bits (1078), Expect = e-114
 Identities = 209/330 (63%), Positives = 248/330 (75%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMD-------------YQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD+M EEQ+D             YQG GAIPALADEE+MGEDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
             Q+ EAP    G+G+  L+AQ+ + PE  V+AGGSQGL IPG SV+GK+PN  + +P + 
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRVEAGGSQGLNIPGVSVQGKHPNVSARYP-EK 119

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            + Q AVNRP M S SYP GSS+SQKGSV E THD QV+N+GFQG TS   + G++PS +P
Sbjct: 120  EEQPAVNRPEMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPSGVP 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
             ++ N+PA  LN                 +  NVN P++NENQ+QPP+ENG TMLFVGEL
Sbjct: 180  QKIANDPAQSLNSGTGGPQGPPHVPPN-QMGTNVNHPVMNENQVQPPIENGPTMLFVGEL 238

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGR+KEIKFFDE+ASGKSKGYCQVEFYD ++A  CKEGMNG++FN
Sbjct: 239  HWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYMFN 298

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GRACVVAFAS QTLKQMGAS MNKNQGQ Q
Sbjct: 299  GRACVVAFASPQTLKQMGASYMNKNQGQSQ 328



 Score =  154 bits (389), Expect = 3e-34
 Identities = 96/232 (41%), Positives = 108/232 (46%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MMHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 422  MMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 481

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGG+EH R TRE              G+AN
Sbjct: 482  GMAPNGMGMMGASGMDGPHAGMWTDASMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 541

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                 +WSGN+DRR ++E+EQDW              EKDSYR+ 
Sbjct: 542  HEKGRSSGASREKERVSER-EWSGNSDRRHRDEKEQDWDRSEREHREHRYREEKDSYREH 600

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ          AMP+E+HRSRSRDVDYGK+RRLPSE
Sbjct: 601  RHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_012085551.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723892|ref|XP_012085552.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|802723894|ref|XP_012085553.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit 6-like
            [Jatropha curcas] gi|643714049|gb|KDP26714.1|
            hypothetical protein JCGZ_17872 [Jatropha curcas]
          Length = 656

 Score =  418 bits (1075), Expect = e-113
 Identities = 210/314 (66%), Positives = 239/314 (76%), Gaps = 1/314 (0%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G ++M YQG GAIPALA+EE MGEDDEYDDLYNDVNVG+  LQ  Q + PPP   VG+G 
Sbjct: 15   GNQKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHQSQVPPPPTSVGSGG 73

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
             Q Q  +V E  V+ GGSQGLKIP  +VEGKY + G+HFP   D  + V  P MGS +Y 
Sbjct: 74   FQTQ--NVNESKVETGGSQGLKIPEVAVEGKYSDPGTHFPEPKDVPMGVKGPEMGSVAYS 131

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
            DGSS++QKG V EMTHD Q RN+GF GS+S P   GV+PS+M  +  NEPA + N     
Sbjct: 132  DGSSIAQKGRVMEMTHDAQARNIGFHGSSSVPSNIGVDPSDMSRKTANEPAPVPNTAATG 191

Query: 1696 XXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLSHY 1520
                     NQIS+N++VNRP VNENQI+PP+ENG T+LFVGEL+WWTTDAELESVLS Y
Sbjct: 192  PRGMPQLPGNQISINMDVNRPTVNENQIRPPVENGSTVLFVGELHWWTTDAELESVLSQY 251

Query: 1519 GRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTLKQ 1340
            GRVKEIKFFDERASGKSKG+CQVEFYDAAAA ACKEGMNGHVFNGR CVVAFAS QTLKQ
Sbjct: 252  GRVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQ 311

Query: 1339 MGASSMNKNQGQPQ 1298
            MGAS MNK QGQ Q
Sbjct: 312  MGASYMNKTQGQSQ 325



 Score =  131 bits (330), Expect = 2e-27
 Identities = 92/237 (38%), Positives = 105/237 (44%), Gaps = 6/237 (2%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MM PQNMMG GFDPT                       P VNAM LAG+APHVNPAFF R
Sbjct: 421  MMPPQNMMGAGFDPTYMGRGAAYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 480

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW+D SM GWG E  RR TRE              GE N
Sbjct: 481  GMAPNGMGMMGPSGMDGPNAGMWSDTSMSGWGEEPGRR-TRESSYGGDDGASEYGYGEVN 539

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXE-----KD 509
            +EK                RDWSGN+DRR ++ERE +W              +     KD
Sbjct: 540  NEKGARSSAASREKERVPERDWSGNSDRRHRDEREHEWDRSEREHREREHRDQRYREEKD 599

Query: 508  SYRDPXXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
            SYR+               RGQ         RA+P+ED+RSRSRD DYGKRRRLP+E
Sbjct: 600  SYREHRQRERDSGYEDDWDRGQSSSKSRTRSRAVPEEDYRSRSRDADYGKRRRLPAE 656


>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  418 bits (1075), Expect = e-113
 Identities = 211/330 (63%), Positives = 247/330 (74%), Gaps = 13/330 (3%)
 Frame = -2

Query: 2248 MDSMGEEQMD-------------YQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD+M EEQ+D             YQG GAIPALADEE+MGEDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
             Q+ EAPP   G+G+  LQAQK + PE   +AGGSQGL IPG SV+GK+ N  + +P Q 
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPRGEAGGSQGLNIPGVSVQGKHLNVTARYPEQ- 119

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            D Q AV+RP MGS SYP G+S+SQKG V E T D QV+NMGFQG +S   + G++PS +P
Sbjct: 120  DGQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPSGVP 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGEL 1568
             ++ N PA  LN                 + +NVN PM++ENQ++PP+ENG TMLFVGEL
Sbjct: 180  QKIANVPAQSLNSGTGGPQGAPHVPPN-QMGLNVNHPMISENQVRPPIENGPTMLFVGEL 238

Query: 1567 NWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFN 1388
            +WWTTDAELESVLS YGRVKEIKFFDERASGKSKGYCQVEFYD A+A ACKEGM+G++FN
Sbjct: 239  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYMFN 298

Query: 1387 GRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            GRACVVAFAS QTLKQMGAS MNKNQGQ Q
Sbjct: 299  GRACVVAFASPQTLKQMGASYMNKNQGQSQ 328



 Score =  149 bits (375), Expect = 1e-32
 Identities = 94/232 (40%), Positives = 106/232 (45%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MMHPQ MMG GFDPT                       P VN + LAG+APHVNPAFF R
Sbjct: 423  MMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAGVAPHVNPAFFGR 482

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD SMGGWGG+EH R TRE              G+AN
Sbjct: 483  GMAPNGMGMMGGPGMDGPHVGMWTDTSMGGWGGDEHGRRTRESSYGGEDGASEYGYGDAN 542

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                 +WSGN+DRR ++E+E+DW              EKDSYR+ 
Sbjct: 543  HEKGRSSGASREKERVSDR-EWSGNSDRRHRDEKERDWDRSEREHREHRYREEKDSYREH 601

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ          AMP+E  RSRSRDVDYGKRRRLPSE
Sbjct: 602  RHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653


>ref|XP_011071167.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Sesamum indicum]
          Length = 643

 Score =  416 bits (1069), Expect = e-113
 Identities = 266/641 (41%), Positives = 317/641 (49%), Gaps = 8/641 (1%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G ++M Y  GGAIPALA+EE++GE+DEYDDLYNDVNVG+G LQ Q+ EA  PS GVGNG 
Sbjct: 18   GSQKMQYHQGGAIPALAEEEMIGEEDEYDDLYNDVNVGEGFLQMQRSEAQMPS-GVGNGG 76

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
             Q  K++VP    +A   Q +     + EG Y   G  FP Q  A  A   P        
Sbjct: 77   FQGSKSNVPGIRAEAIAPQEVTNARVTSEGNYLPTGVQFPEQKTAFPAAGGP-------A 129

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
                 SQ+G + EM H+ Q  ++G+QGS S P +T  +  N P ++  EPA   N     
Sbjct: 130  QTVDASQRGRLPEMVHNSQPGHLGYQGSVSMPQKTAADRMNKPEKIVGEPAPSPNPNMGS 189

Query: 1696 XXXXXXXANQI---SVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLS 1526
                      +   S NVN+NRP+ +E  I+P +ENG TMLFVGEL+WWTTDAELESVL 
Sbjct: 190  SKGGPQIPTTMMNSSANVNINRPVDDEYLIRPAVENGNTMLFVGELHWWTTDAELESVLI 249

Query: 1525 HYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTL 1346
             YG+VKEIKFFDERASGKSKGYCQVEFYD AAA ACKEGM+GH+FNGRACVVAFA+ QT+
Sbjct: 250  QYGKVKEIKFFDERASGKSKGYCQVEFYDPAAAAACKEGMHGHLFNGRACVVAFATPQTI 309

Query: 1345 KQMGASSMNKNQ----GQPQXXXXXXXXXXXXXXXNYPSXXXXXXXXXXXXXXXXXXXXX 1178
            KQMG+S MNK Q     Q Q               NYPS                     
Sbjct: 310  KQMGSSYMNKTQTQGQSQQQGRNLINDGAGRGNGTNYPSGDTGRNFGRGGWGRGGNQVPN 369

Query: 1177 XXXXXXXXXXXXXXXAKNMIXXXXXXXXXXXXXXXXXXXXXXXXXXXXGMMHPQNMMG-G 1001
                            KNMI                             MMHPQ MMG G
Sbjct: 370  KGPGPGPVRGRGGMGNKNMIGNAPGAGGGAYGQAGLAGPGFGGPPG---MMHPQGMMGPG 426

Query: 1000 FDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNRXXXXXXXXXXX 821
            FD                         P VN+M L G+APHVNPAFF+R           
Sbjct: 427  FDLAFMGRGGGYAGFSGPAFPGMLPPYPAVNSMGLPGVAPHVNPAFFSRGMAPNGMGMMG 486

Query: 820  XXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEANHEKXXXXXXXX 641
                      MW D ++GGWGGEEH RGTRE              GEA+HEK        
Sbjct: 487  TTGMDGPHSGMWPDMNLGGWGGEEHGRGTRESSYGGEDNASEYGYGEASHEKGVRSSAAS 546

Query: 640  XXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDPXXXXXXXXXXX 461
                    RDWS N ++R +EER+ D               EKD +RD            
Sbjct: 547  REKERNSERDWSSNPEKRHREERDHD---GDRYDRDHKYREEKDRHRDYRHKDRDLGYDD 603

Query: 460  XXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
               RGQ          A+P +DHRSRSRD DYGKR+R+PSE
Sbjct: 604  DWDRGQSSRSRSRSR-AVPGDDHRSRSRDADYGKRKRMPSE 643


>ref|XP_009359255.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 6
            [Pyrus x bretschneideri]
          Length = 656

 Score =  413 bits (1062), Expect = e-112
 Identities = 212/331 (64%), Positives = 247/331 (74%), Gaps = 14/331 (4%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            M+ +GEEQ+DY             QG GAI ALADEELM EDDE+DDLYNDVNVG+G +Q
Sbjct: 1    MEPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEELMVEDDEFDDLYNDVNVGEGFMQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
              + EAP P+ GVGNG LQAQKTDVPE  VQ+G SQ LKIPG SV+GKY  AG+ FP QN
Sbjct: 61   MHRSEAPLPTGGVGNGGLQAQKTDVPEPRVQSGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
               VA   P +GS  Y  G+S SQKG V +MTHD QVR+M FQGST+ PP  GV+ S++ 
Sbjct: 121  QPPVA-KEPELGSTGYASGASGSQKGRVMDMTHDTQVRHMAFQGSTTMPPNVGVDSSDIT 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGE 1571
            G+  +E    LN              NQ+S+ +N NRPMVNENQI+PP+ENG   LFVGE
Sbjct: 180  GKGNSEFVPSLNPASAGPPGATQIPTNQMSIKINANRPMVNENQIRPPIENGSATLFVGE 239

Query: 1570 LNWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVF 1391
            L+WWTTDAE+ESV+S YGRVKEIKFFDERASGKSKGYCQVEF+D AAATACKEGM+G+VF
Sbjct: 240  LHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATACKEGMDGYVF 299

Query: 1390 NGRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            NGRACVVAFAS QTLKQMGAS ++K+QGQ Q
Sbjct: 300  NGRACVVAFASPQTLKQMGASYLSKSQGQAQ 330



 Score =  136 bits (343), Expect = 7e-29
 Identities = 93/233 (39%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MM+PQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 425  MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFAR 484

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW DPSMG WGGEEH R TRE              G+ N
Sbjct: 485  GMATNGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGRRTRESSYGGDDNASEYGYGDTN 544

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDW-XXXXXXXXXXXXXXEKDSYRD 497
            +EK                RDWSGN++RR +++REQD+               EKDSYRD
Sbjct: 545  NEKGPRSSAASRERERGSERDWSGNSERRHRDDREQDYERSERGEHREHRYKEEKDSYRD 604

Query: 496  PXXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                           RGQ         +A+P++DHRSRSRDVDY KRRRLPSE
Sbjct: 605  HRQRDRDGGYEDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-KRRRLPSE 656


>ref|XP_012085540.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Jatropha curcas] gi|802723858|ref|XP_012085541.1|
            PREDICTED: cleavage and polyadenylation specificity
            factor subunit 6-like [Jatropha curcas]
            gi|643714040|gb|KDP26705.1| hypothetical protein
            JCGZ_17863 [Jatropha curcas]
          Length = 651

 Score =  410 bits (1055), Expect = e-111
 Identities = 207/314 (65%), Positives = 237/314 (75%), Gaps = 1/314 (0%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G ++M YQG GAIPALA+EE MGEDDEYDDLYNDVNVG+  LQ  Q E PPP+  + +G 
Sbjct: 15   GAQKMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHQSEVPPPTTSISSGG 73

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
             QAQ  + P   V  GGSQGL IPGG VEGKY N  +HFP Q +  +      MGS  YP
Sbjct: 74   FQAQNVNEPR--VGTGGSQGLNIPGGVVEGKYSNVETHFPEQKEVPMGAKGAEMGSVGYP 131

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
            DGS V+QKG V E+THD Q RN+GFQGS+S P    V+PS+M  ++ NEPA + N     
Sbjct: 132  DGS-VTQKGRVMEVTHDSQARNIGFQGSSSVPSNVVVDPSDMSRKIPNEPAPVPNTSISG 190

Query: 1696 XXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLSHY 1520
                     NQIS+N++VNRP +NENQI+PP+ENG T+LFVGEL+WWTTDAELESVLS Y
Sbjct: 191  PRGIQQLPGNQISINIDVNRPGMNENQIRPPVENGSTVLFVGELHWWTTDAELESVLSQY 250

Query: 1519 GRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTLKQ 1340
            G+VKEIKFFDERASGKSKG+CQVEFYDAAAA ACKEGMNGHVFNGR CVVAFAS QTLKQ
Sbjct: 251  GKVKEIKFFDERASGKSKGFCQVEFYDAAAAAACKEGMNGHVFNGRPCVVAFASPQTLKQ 310

Query: 1339 MGASSMNKNQGQPQ 1298
            MGAS MNK QGQPQ
Sbjct: 311  MGASYMNKTQGQPQ 324



 Score =  139 bits (351), Expect = 9e-30
 Identities = 94/232 (40%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMMGG-FDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MM PQNMMGG FDPT                       P VNAM LAG+APHVNPAFF R
Sbjct: 421  MMPPQNMMGGGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 480

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW+D SMGGWG E  RR TRE              GE N
Sbjct: 481  GMAPNGMGMMGPSAMDGPNAGMWSDTSMGGWGEEPGRR-TRESSYGGDDGASEYGYGEVN 539

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            +EK                RDWSGN+DRR ++ERE DW              EKDSYR+ 
Sbjct: 540  NEKGTRSSAASREKERAPERDWSGNSDRRHRDEREHDWDRSEREHREHRYREEKDSYREH 599

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ         RA+P+ED+R RSRD DYGKRRRLPS+
Sbjct: 600  RRRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRPRSRDADYGKRRRLPSD 651


>ref|XP_008389755.1| PREDICTED: RNA-binding protein FUS-like [Malus domestica]
            gi|657994880|ref|XP_008389756.1| PREDICTED: RNA-binding
            protein FUS-like [Malus domestica]
          Length = 658

 Score =  409 bits (1052), Expect = e-111
 Identities = 212/331 (64%), Positives = 243/331 (73%), Gaps = 14/331 (4%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD MG+EQ+DY             QG GAI ALADEE M EDDEYDDLYNDVNVG+G +Q
Sbjct: 1    MDPMGDEQIDYEDEEYGGSQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFMQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
              + EAP P  GVGNG LQAQKT+VPE   +AG SQ LKIPG SV+GKY  AG+ FP QN
Sbjct: 61   MHRSEAPVPPGGVGNGGLQAQKTNVPEPRARAGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
               VA   P +GS  Y  G+S SQKG V EMTHD QVR MGFQGST+ PP  G++ S++ 
Sbjct: 121  QPPVA-KEPELGSTGYVGGASGSQKGRVMEMTHDTQVRQMGFQGSTTIPPNVGIDSSDIT 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGE 1571
            G+  +E    LN              NQ+S+ +N NRPMVNENQI+PP+ENG  MLFVGE
Sbjct: 180  GKGNSEYIPSLNPGTAGPPGAAQIPTNQMSIKINANRPMVNENQIRPPIENGSAMLFVGE 239

Query: 1570 LNWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVF 1391
            L+WWTTDAE+ES LS YGRVKEIKFFDERASGKSKGYCQVEF+D AAATACKEGM+G+VF
Sbjct: 240  LHWWTTDAEIESXLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYVF 299

Query: 1390 NGRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            NGRACVVAFAS QTLKQMGAS ++K+Q Q Q
Sbjct: 300  NGRACVVAFASPQTLKQMGASYLSKSQXQAQ 330



 Score =  129 bits (323), Expect = 2e-26
 Identities = 92/235 (39%), Positives = 106/235 (45%), Gaps = 4/235 (1%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MM+PQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 425  MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFGR 484

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW DPSMG WGGEEH R TRE              G+ N
Sbjct: 485  GMAANGMGMMGSSGMEGHHAGMWNDPSMGAWGGEEHGRRTRESSYGGDDNASEYGYGDTN 544

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDW-XXXXXXXXXXXXXXEKDSYRD 497
            +EK                RDWSGN++RR ++ REQD+               EKDSYR+
Sbjct: 545  NEKGARSSAASRERERGSERDWSGNSERRHRDGREQDFERSERGEHREHRYKEEKDSYRE 604

Query: 496  PXXXXXXXXXXXXXXRGQ--XXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                           RGQ           +A+P++DHRSRSRDVDY KRRRLPSE
Sbjct: 605  HRQRDRDGVYEDDWDRGQSSSRPRSRSRSKAVPEDDHRSRSRDVDY-KRRRLPSE 658


>ref|XP_008340137.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            6-like [Malus domestica]
          Length = 656

 Score =  407 bits (1046), Expect = e-110
 Identities = 211/331 (63%), Positives = 244/331 (73%), Gaps = 14/331 (4%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD +GEEQ+DY             QG GAI ALADEE M EDDE+DDLYNDVNVG+G +Q
Sbjct: 1    MDPLGEEQIDYEDEEYGGAHKLQYQGSGAISALADEEPMVEDDEFDDLYNDVNVGEGFMQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
              + EA  P+ GVGNG LQAQKTDVPE  VQAG SQ LKIPG SV+GKY  AG+ FP QN
Sbjct: 61   MHRSEASLPTGGVGNGGLQAQKTDVPEPRVQAGVSQDLKIPGVSVQGKYSGAGAQFPEQN 120

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
               VA   P +GS  Y  G+S SQKG V EMTHD QVR+M FQGST+ PP  GV+ S++ 
Sbjct: 121  QPPVA-KEPELGSTDYVSGASGSQKGRVMEMTHDPQVRHMAFQGSTTMPPNVGVDSSDIT 179

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGE 1571
            G+  +E    LN              NQ+S+ +N NRPMVNENQI+PP+ENG   LFVGE
Sbjct: 180  GKGNSEFVPSLNPASAGPPGATQILTNQMSIKINANRPMVNENQIRPPIENGSATLFVGE 239

Query: 1570 LNWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVF 1391
            L+WWTTDAE+ESV+S YGRVKEIKFFDERASGKSKGYCQVEF+D AAATACKEGM+G+VF
Sbjct: 240  LHWWTTDAEIESVISQYGRVKEIKFFDERASGKSKGYCQVEFHDQAAATACKEGMDGYVF 299

Query: 1390 NGRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            NGRACV A+AS QTLKQMGAS ++K+QGQ Q
Sbjct: 300  NGRACVXAYASPQTLKQMGASYLSKSQGQAQ 330



 Score =  136 bits (343), Expect = 7e-29
 Identities = 93/233 (39%), Positives = 107/233 (45%), Gaps = 2/233 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MM+PQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 425  MMNPQGMMGSGFDPTYMGRGGGYGGFPGPAFPGMLPQFPGVNTMGLAGVAPHVNPAFFGR 484

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW DPSMG WGGEEH R TRE              G+ N
Sbjct: 485  GMATNGMGMMGSSGMEGHHAGMWNDPSMGTWGGEEHGRRTRESSYGGDDNASEYGYGDTN 544

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDW-XXXXXXXXXXXXXXEKDSYRD 497
            +EK                RDWSGN++RR +++REQD+               EKDSYRD
Sbjct: 545  NEKGPRSSAASRERERGSERDWSGNSERRHRDDREQDYERSERGEQREHRYKEEKDSYRD 604

Query: 496  PXXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                           RGQ         +A+P++DHRSRSRDVDY KRRRLPSE
Sbjct: 605  HRQRDRDGGYEDDWDRGQSSSRPRSRSKAVPEDDHRSRSRDVDY-KRRRLPSE 656


>ref|XP_008221952.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185 [Prunus mume]
          Length = 647

 Score =  401 bits (1031), Expect = e-108
 Identities = 209/331 (63%), Positives = 238/331 (71%), Gaps = 14/331 (4%)
 Frame = -2

Query: 2248 MDSMGEEQMDY-------------QGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 2108
            MD M EEQ+DY             QG GAI ALADEE M EDDEYDDLYNDVNVG+G LQ
Sbjct: 1    MDPMAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 2107 FQQPEAPPPSAGVGNGRLQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQN 1928
              + EAP P  GVGNG LQAQKTDV E  VQAG SQ  KIPG SV+GKY +A + FP Q 
Sbjct: 61   MHRSEAPLPPGGVGNGGLQAQKTDVTETRVQAGVSQESKIPGVSVQGKYSSAVAQFPEQQ 120

Query: 1927 DAQVAVNRPNMGSASYPDGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMP 1748
            D       P +GS  Y  G+S SQKG   EM+HD QVR+MGFQGST+ PP  G + S++ 
Sbjct: 121  DQPPVAKEPELGSTGYVGGASGSQKGRAMEMSHDTQVRHMGFQGSTTMPPNIGGDSSDIT 180

Query: 1747 GRVTNEPAHMLNXXXXXXXXXXXXA-NQISVNVNVNRPMVNENQIQPPLENGGTMLFVGE 1571
            G+   E    +N              NQIS+ VN NRPM NENQ++P +ENG TMLFVGE
Sbjct: 181  GKTALESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQVRPTVENGSTMLFVGE 240

Query: 1570 LNWWTTDAELESVLSHYGRVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVF 1391
            L+WWTTD+ELESVLS YGRVKEIKFFDERASGKSKGYCQVEF+D AAATACKEGM+G++F
Sbjct: 241  LHWWTTDSELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLF 300

Query: 1390 NGRACVVAFASSQTLKQMGASSMNKNQGQPQ 1298
            NGRACVVAFAS QTLKQMGAS ++K+QGQ Q
Sbjct: 301  NGRACVVAFASPQTLKQMGASYLSKSQGQTQ 331



 Score =  152 bits (384), Expect = 1e-33
 Identities = 99/233 (42%), Positives = 108/233 (46%), Gaps = 2/233 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MM+PQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 428  MMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPHVNPAFFGR 487

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW DPSMGGW GEEH R TRE              GEAN
Sbjct: 488  GMATNGMGMMGSSGMDGHHAGMWNDPSMGGWAGEEHGRRTRESSYGGDDGASEYGYGEAN 547

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXE-KDSYRD 497
            HEK                 DWSGN++RR ++EREQDW              E KDSYRD
Sbjct: 548  HEKGSER-------------DWSGNSERRHRDEREQDWDRSERGEHREHRYKEEKDSYRD 594

Query: 496  PXXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                           RGQ         +AMP++DHRSRSRDVDYGKRRRLPSE
Sbjct: 595  HRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 647


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  400 bits (1029), Expect = e-108
 Identities = 202/313 (64%), Positives = 240/313 (76%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G +++ YQG GAIPALA+EE MGEDDEYDDLYNDVN+G+  LQ  + EAPP    VGNG 
Sbjct: 15   GAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHRSEAPPAPPSVGNGG 73

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
             Q + ++  +  V++GGSQGL IPG +VE KY + G+HFP QN     V  P +GS  YP
Sbjct: 74   FQPRNSN--DLRVESGGSQGLNIPGVAVESKY-STGTHFPEQN-----VKGPEIGSVGYP 125

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
            DGSS++QK  V EMT+D Q RNMGFQGSTSGP   GV+PS+M  +++N+P  + N     
Sbjct: 126  DGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNKISNDPTPVPNAGVPR 185

Query: 1696 XXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLSHYG 1517
                    +Q+++N++ NR   NENQI+PPLENG TML+VGEL+WWTTDAELE+VLS YG
Sbjct: 186  VIPQLPA-SQMNMNMDTNRSATNENQIRPPLENGSTMLYVGELHWWTTDAELENVLSQYG 244

Query: 1516 RVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTLKQM 1337
             VKEIKFFDERASGKSKGYCQVEFYDAAAA ACKEGMNGH+FNGRACVVAFAS QTLKQM
Sbjct: 245  MVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFNGRACVVAFASQQTLKQM 304

Query: 1336 GASSMNKNQGQPQ 1298
            GAS MNKNQGQPQ
Sbjct: 305  GASYMNKNQGQPQ 317



 Score =  139 bits (349), Expect = 1e-29
 Identities = 93/232 (40%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMM-GGFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            M+ PQ+MM  GFDPT                       P VNAM LAG+APHVNPAFF R
Sbjct: 414  MLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVAPHVNPAFFGR 473

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MW+D SMGGWG E  RR TRE              GE N
Sbjct: 474  GMAPNGMGMMGPSGMDGPNAGMWSDTSMGGWGEEPGRR-TRESSYGGDDGASEYGYGEVN 532

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                RDWSGN+DRR +++RE DW              EK+SYRD 
Sbjct: 533  HEKGARSSAASREKERASERDWSGNSDRRHRDDREHDWDRSEREHKEHRYREEKESYRDH 592

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ         RA+P+ED+RSRSRD DYGKRRRLPSE
Sbjct: 593  RQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>gb|KHG22501.1| Cleavage and polyadenylation specificity factor subunit [Gossypium
            arboreum]
          Length = 648

 Score =  394 bits (1013), Expect = e-106
 Identities = 199/313 (63%), Positives = 232/313 (74%)
 Frame = -2

Query: 2236 GEEQMDYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQPEAPPPSAGVGNGR 2057
            G ++  YQG G IPALAD E++GEDDEYDDLYNDVNVG+G LQ Q+ E PP   G G+  
Sbjct: 15   GVQKTQYQGSGTIPALADVEMIGEDDEYDDLYNDVNVGEGFLQLQRSE-PPVQPGTGSIG 73

Query: 2056 LQAQKTDVPEQPVQAGGSQGLKIPGGSVEGKYPNAGSHFPAQNDAQVAVNRPNMGSASYP 1877
            LQA K + PE   +AGGSQG  I G SV+GKYPN  + +  + D Q AVNRP +GS +YP
Sbjct: 74   LQAHKNEAPEPRGEAGGSQGPNISGISVQGKYPNVSAGY-READVQPAVNRPEIGSGNYP 132

Query: 1876 DGSSVSQKGSVQEMTHDVQVRNMGFQGSTSGPPRTGVNPSNMPGRVTNEPAHMLNXXXXX 1697
             GS+ SQ GSV E   D QV+NMGFQG TS   + G  PS +P ++ N PA  LN     
Sbjct: 133  SGSASSQGGSVMETNFDTQVKNMGFQGLTSASSKVGTGPSVVPQKIANNPAQSLNSGTGG 192

Query: 1696 XXXXXXXANQISVNVNVNRPMVNENQIQPPLENGGTMLFVGELNWWTTDAELESVLSHYG 1517
                        + +NVN PM+NENQ++PP+ENG TMLFVGEL+WWTTDAELESVLS YG
Sbjct: 193  PQGASQVPPN-QMGMNVNHPMMNENQVRPPIENGPTMLFVGELHWWTTDAELESVLSQYG 251

Query: 1516 RVKEIKFFDERASGKSKGYCQVEFYDAAAATACKEGMNGHVFNGRACVVAFASSQTLKQM 1337
            RVKEIKFFDERASGKSKGYCQVEFYD+A+A ACKEGMNG++FNGRACVVAFAS QTLKQM
Sbjct: 252  RVKEIKFFDERASGKSKGYCQVEFYDSASAAACKEGMNGYMFNGRACVVAFASPQTLKQM 311

Query: 1336 GASSMNKNQGQPQ 1298
            GAS MNK+QGQPQ
Sbjct: 312  GASYMNKDQGQPQ 324



 Score =  137 bits (344), Expect = 6e-29
 Identities = 90/232 (38%), Positives = 105/232 (45%), Gaps = 1/232 (0%)
 Frame = -2

Query: 1030 MMHPQNMMG-GFDPTXXXXXXXXXXXXXXXXXXXXXXXPTVNAMRLAGLAPHVNPAFFNR 854
            MMHPQ MMG GFDPT                       P VN M LAG+APHVNPAFF R
Sbjct: 418  MMHPQGMMGAGFDPTYMGRGGGYGGFPGPGFPGMLPSFPAVNTMGLAGVAPHVNPAFFGR 477

Query: 853  XXXXXXXXXXXXXXXXXXXXXMWTDPSMGGWGGEEHRRGTREXXXXXXXXXXXXXXGEAN 674
                                 MWTD +MGGWGG+EH R TRE              G+AN
Sbjct: 478  GMAPNGLGMMGVAGMDGPHSGMWTDTNMGGWGGDEHDRRTRESSYGGEDGASEYGYGDAN 537

Query: 673  HEKXXXXXXXXXXXXXXXXRDWSGNTDRRQQEEREQDWXXXXXXXXXXXXXXEKDSYRDP 494
            HEK                R+WSGN++RR  +E+E++               EKDSYR+ 
Sbjct: 538  HEK-GRSSGATREKDRASEREWSGNSERRHHDEKERESDRPEREHREHRYREEKDSYREH 596

Query: 493  XXXXXXXXXXXXXXRGQXXXXXXXXXRAMPDEDHRSRSRDVDYGKRRRLPSE 338
                          RGQ          A  +E+HRSRSRDVDYGK+RRLPSE
Sbjct: 597  RHRGRDLDYDDDWDRGQSSSRSRNRSHATREEEHRSRSRDVDYGKKRRLPSE 648