BLASTX nr result
ID: Zanthoxylum22_contig00008165
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00008165
(4003 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II su... 2261 0.0
ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citr... 2259 0.0
ref|XP_007025631.1| DNA-directed RNA polymerase family protein i... 2243 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 2239 0.0
ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II su... 2238 0.0
ref|XP_011027835.1| PREDICTED: DNA-directed RNA polymerase II su... 2237 0.0
ref|XP_014518479.1| PREDICTED: DNA-directed RNA polymerase II su... 2236 0.0
gb|KDO44200.1| hypothetical protein CISIN_1g000996mg [Citrus sin... 2236 0.0
ref|XP_010108197.1| DNA-directed RNA polymerase II subunit [Moru... 2235 0.0
ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phas... 2234 0.0
ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II su... 2233 0.0
ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II su... 2232 0.0
gb|KOM39913.1| hypothetical protein LR48_Vigan04g011100 [Vigna a... 2230 0.0
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su... 2230 0.0
ref|XP_014501986.1| PREDICTED: DNA-directed RNA polymerase II su... 2229 0.0
ref|XP_003589372.2| DNA-directed RNA polymerase subunit beta [Me... 2229 0.0
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 2229 0.0
ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II su... 2228 0.0
ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II su... 2227 0.0
ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II su... 2227 0.0
>ref|XP_006487405.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Citrus
sinensis]
Length = 1195
Score = 2261 bits (5858), Expect = 0.0
Identities = 1125/1168 (96%), Positives = 1133/1168 (97%), Gaps = 1/1168 (0%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTR+KRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDPEMLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKKRDI LQQRESPED GWHDLVAKGF IND
Sbjct: 628 RPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARLHPEEAY DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+Q+EAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+AM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCEHCGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPS-NQKKRGA 266
ELMAMAIAPRMLTKE+ K S + KK+GA
Sbjct: 1168 ELMAMAIAPRMLTKEDTKQSKDHKKKGA 1195
>ref|XP_006423594.1| hypothetical protein CICLE_v10027701mg [Citrus clementina]
gi|557525528|gb|ESR36834.1| hypothetical protein
CICLE_v10027701mg [Citrus clementina]
gi|641824899|gb|KDO44201.1| hypothetical protein
CISIN_1g000996mg [Citrus sinensis]
Length = 1195
Score = 2259 bits (5855), Expect = 0.0
Identities = 1124/1168 (96%), Positives = 1133/1168 (97%), Gaps = 1/1168 (0%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTR+KRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDPEMLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKKRDI LQQRESPED GWHDLVAKGF IND
Sbjct: 628 RPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARLHPEEAY DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+Q+EAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+AM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA+
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAS 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCEHCGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPS-NQKKRGA 266
ELMAMAIAPRMLTKE+ K S + KK+GA
Sbjct: 1168 ELMAMAIAPRMLTKEDTKQSKDHKKKGA 1195
>ref|XP_007025631.1| DNA-directed RNA polymerase family protein isoform 1 [Theobroma
cacao] gi|508780997|gb|EOY28253.1| DNA-directed RNA
polymerase family protein isoform 1 [Theobroma cacao]
Length = 1189
Score = 2243 bits (5811), Expect = 0.0
Identities = 1114/1167 (95%), Positives = 1131/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 25 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 85 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 145 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 204
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 205 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 324
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTREKRIKYAKEILQKEMLPHVG GDFCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 325 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGDFCETKKAYYFGYIIHRLLLCALGRR 384
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 385 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTI 444
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 505 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVG+HR+P+MLV T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 565 PQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKK+DI LQQRESPED GWHDLVAKGF IND
Sbjct: 625 RPLFIVEKQRLLIKKKDIHALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 684
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685 LVQARVNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 745 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 804
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 805 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 864
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQASRY+RRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 865 TRVSGEDVIIGKTTPISQEEAQGQASRYSRRDHSISLRHSETGIVDQVLLTTNADGLRFV 924
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 925 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 984
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 985 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGRRLSAM 1044
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1164
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTKE PK +QKK+GA
Sbjct: 1165 ELMAMAIAPRMLTKEPPK--DQKKKGA 1189
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 2239 bits (5802), Expect = 0.0
Identities = 1110/1167 (95%), Positives = 1129/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDP+MLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKK+DI LQQRES E+ GWHDLVAKGF I+D
Sbjct: 628 RPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMISMTIHD 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPIAQEEAQGQ++RYTRRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+AM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ +QKK+GA
Sbjct: 1168 ELMAMAIAPRMLTKDVKPTKDQKKKGA 1194
>ref|XP_012449722.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] gi|823234175|ref|XP_012449723.1| PREDICTED:
DNA-directed RNA polymerase II subunit RPB2 [Gossypium
raimondii] gi|728847618|gb|KHG27061.1| DNA-directed RNA
polymerase II subunit RPB2 [Gossypium arboreum]
gi|763801668|gb|KJB68623.1| hypothetical protein
B456_010G255400 [Gossypium raimondii]
gi|763801669|gb|KJB68624.1| hypothetical protein
B456_010G255400 [Gossypium raimondii]
Length = 1189
Score = 2238 bits (5799), Expect = 0.0
Identities = 1110/1167 (95%), Positives = 1130/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 25 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 85 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 145 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 204
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 205 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 324
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTREKRIKYAKEILQKEMLPHVG G+FCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 325 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCALGRR 384
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 385 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTI 444
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 505 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVG+HR+P+MLV T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 565 PQATKIFVNGCWVGVHRNPDMLVTTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKK+DI LQQRE+PED GWHDLVAKGF IND
Sbjct: 625 RPLFIVEKQRLLIKKKDIHALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 684
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685 LVQARINPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 745 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 804
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+ TMGMRHGSYDKLDDDGLAPPG
Sbjct: 805 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRATTMGMRHGSYDKLDDDGLAPPG 864
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQASRY++RDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 865 TRVSGEDVIIGKTTPISQEEAQGQASRYSKRDHSISLRHSETGIVDQVLLTTNADGLRFV 924
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 925 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 984
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNIS+ALHKCGYQMRGFETMYNGHTGRRL+AM
Sbjct: 985 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISRALHKCGYQMRGFETMYNGHTGRRLTAM 1044
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1164
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTKE PK +QKK+GA
Sbjct: 1165 ELMAMAIAPRMLTKEPPK--DQKKKGA 1189
>ref|XP_011027835.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Populus
euphratica]
Length = 1198
Score = 2237 bits (5797), Expect = 0.0
Identities = 1110/1167 (95%), Positives = 1129/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 32 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 91
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 92 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 151
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 152 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 211
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 212 MSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 271
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 272 PYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDY 331
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTREKRIKYAKEILQKEMLPHVG G+FCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 332 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLLCALGRR 391
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 392 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTI 451
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 452 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 511
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 512 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 571
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNG WVGIHRDP+MLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 572 PQATKIFVNGGWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 631
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQ+LLI+K+DI LQQRE+P++ GWHDLV+KGF I+D
Sbjct: 632 RPLFIVEKQKLLIRKKDIHALQQRETPDEGGWHDLVSKGFIEYIDTEEEETTMISMTIHD 691
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 692 LVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 751
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 752 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 811
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG
Sbjct: 812 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 871
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPIAQEEAQGQ++RYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 872 TRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 931
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 932 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 991
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 992 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1051
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1052 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1111
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1112 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1171
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ + +QKK+GA
Sbjct: 1172 ELMAMAIAPRMLTKDIKQAKSQKKKGA 1198
>ref|XP_014518479.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vigna radiata
var. radiata]
Length = 1194
Score = 2236 bits (5794), Expect = 0.0
Identities = 1107/1167 (94%), Positives = 1130/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 88 YRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYA+VAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKKRDI LQQRESPE+ GWHDLV+KGF IND
Sbjct: 628 RPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQA RYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTKE +QKK+GA
Sbjct: 1168 ELMAMAIAPRMLTKEIKSTKDQKKKGA 1194
>gb|KDO44200.1| hypothetical protein CISIN_1g000996mg [Citrus sinensis]
Length = 1186
Score = 2236 bits (5793), Expect = 0.0
Identities = 1116/1168 (95%), Positives = 1125/1168 (96%), Gaps = 1/1168 (0%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPG QSDFAE
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGQQSDFAE-- 85
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
IYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 86 -------IYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 138
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 139 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 198
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 199 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 258
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 259 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 318
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTR+KRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 319 IGKRGATVGVTRDKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 378
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 379 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 438
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 439 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 498
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 499 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 558
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDPEMLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 559 PQATKIFVNGCWVGIHRDPEMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 618
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKKRDI LQQRESPED GWHDLVAKGF IND
Sbjct: 619 RPLFIVEKQRLLIKKRDIIALQQRESPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 678
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARLHPEEAY DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 679 LVQARLHPEEAYADTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 738
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 739 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 798
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG
Sbjct: 799 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 858
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+Q+EAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 859 TRVSGEDVIIGKTTPISQDEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 918
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 919 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 978
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+AM
Sbjct: 979 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAM 1038
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA+
Sbjct: 1039 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAS 1098
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCEHCGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1099 HFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1158
Query: 346 ELMAMAIAPRMLTKEEPKPS-NQKKRGA 266
ELMAMAIAPRMLTKE+ K S + KK+GA
Sbjct: 1159 ELMAMAIAPRMLTKEDTKQSKDHKKKGA 1186
>ref|XP_010108197.1| DNA-directed RNA polymerase II subunit [Morus notabilis]
gi|587931023|gb|EXC18122.1| DNA-directed RNA polymerase
II subunit [Morus notabilis]
Length = 1193
Score = 2235 bits (5792), Expect = 0.0
Identities = 1109/1168 (94%), Positives = 1129/1168 (96%), Gaps = 1/1168 (0%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDF ETI
Sbjct: 26 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFVETI 85
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 86 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 145
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 146 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 205
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 206 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 265
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIR EIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 266 PYIRAEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 325
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVGTG+FCETKKAYYFGYIIHRLLLCALGRR
Sbjct: 326 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGTGEFCETKKAYYFGYIIHRLLLCALGRR 385
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 386 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 445
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 446 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 505
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 506 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 565
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDP+MLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 566 PQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 625
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKKRDI LQQRE+PE+ GWHDLV+ GF IND
Sbjct: 626 RPLFIVEKQRLLIKKRDIRALQQRETPEEAGWHDLVSNGFIEYIDTEEEETTMISMTIND 685
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 686 LVQARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 745
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 746 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 805
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QS+IDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG
Sbjct: 806 QSAIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 865
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQ-ASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRF 1070
TRVSGEDVIIGKTTPIAQ+EAQGQ ASRYTRRDHSISLRHSE G+VDQVLLTTNADGLRF
Sbjct: 866 TRVSGEDVIIGKTTPIAQDEAQGQAASRYTRRDHSISLRHSENGIVDQVLLTTNADGLRF 925
Query: 1069 VKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 890
VKVRVRS+RIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI
Sbjct: 926 VKVRVRSIRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTI 985
Query: 889 GQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSA 710
GQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+A
Sbjct: 986 GQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTA 1045
Query: 709 MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA 530
MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA
Sbjct: 1046 MIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGA 1105
Query: 529 AHFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLF 350
AHFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLF
Sbjct: 1106 AHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLF 1165
Query: 349 QELMAMAIAPRMLTKEEPKPSNQKKRGA 266
QELMAMAIAPRMLTK+ ++QKK+GA
Sbjct: 1166 QELMAMAIAPRMLTKDVKPLNDQKKKGA 1193
>ref|XP_007148168.1| hypothetical protein PHAVU_006G185800g [Phaseolus vulgaris]
gi|561021391|gb|ESW20162.1| hypothetical protein
PHAVU_006G185800g [Phaseolus vulgaris]
Length = 1194
Score = 2234 bits (5788), Expect = 0.0
Identities = 1107/1167 (94%), Positives = 1129/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
Y+I FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 88 YRISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT+ASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNG W+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGSWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKKRDI LQQRESPE+ GWHDLV+KGF IND
Sbjct: 628 RPLFIVDKQRLLIKKRDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PE+AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARLNPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQA RYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTKE +QKK+GA
Sbjct: 1168 ELMAMAIAPRMLTKEIKSAKDQKKKGA 1194
>ref|XP_012091599.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Jatropha
curcas]
Length = 1193
Score = 2233 bits (5786), Expect = 0.0
Identities = 1107/1167 (94%), Positives = 1127/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQ DFAETI
Sbjct: 27 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQPDFAETI 86
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 87 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 146
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 147 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 206
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPS+MFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 207 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSSMFVRMLSRTSAKGGSSGQYIRATL 266
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 267 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 326
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTREKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 327 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 386
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLT+DVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 387 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTKDVRSYVQKCVDNGKDVNLQFAIKAKTI 446
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 447 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 506
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 507 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 566
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDP+MLVKT RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 567 PQATKIFVNGCWVGIHRDPDMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 626
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKK+DI LQQRES E+ GWHDLVAKGF I+D
Sbjct: 627 RPLFIVEKQRLLIKKKDIHALQQRESSEEGGWHDLVAKGFIEYIDTEEEETTMISMTIHD 686
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 687 LVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 746
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 747 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 806
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 807 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 866
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPIAQEEAQGQ++RYTRRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 867 TRVSGEDVIIGKTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNADGLRFV 926
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 927 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 986
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+AM
Sbjct: 987 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAM 1046
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1047 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1106
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1107 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1166
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ + KK+GA
Sbjct: 1167 ELMAMAIAPRMLTKDIKPVKDHKKKGA 1193
>ref|XP_004499217.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Cicer
arietinum]
Length = 1194
Score = 2232 bits (5785), Expect = 0.0
Identities = 1102/1167 (94%), Positives = 1132/1167 (97%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGET+TLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETSTLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTL+QNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAK+ILQ+EMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKDILQREMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKK+DI LQQRESPE+ GWHDLV+KGF IND
Sbjct: 628 RPLFIVDKQRLLIKKKDIHSLQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTP++QEEAQGQA+RY++RDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPLSQEEAQGQAARYSKRDHSISLRHSETGIVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCEHCGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCEHCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTKE +QKK+GA
Sbjct: 1168 ELMAMAIAPRMLTKEIKSIKDQKKKGA 1194
>gb|KOM39913.1| hypothetical protein LR48_Vigan04g011100 [Vigna angularis]
Length = 1197
Score = 2230 bits (5779), Expect = 0.0
Identities = 1105/1168 (94%), Positives = 1130/1168 (96%), Gaps = 1/1168 (0%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 30 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 89
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 90 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 149
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYF+INGSEKVLIAQEK
Sbjct: 150 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFVINGSEKVLIAQEK 209
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 210 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 269
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 270 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 329
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 330 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRR 389
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 390 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 449
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 450 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 509
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 510 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 569
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 570 PQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 629
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKK+DI LQQRESPE+ GWHDLV+KGF IND
Sbjct: 630 RPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGFIEYIDTEEEETTMISMTIND 689
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 690 LVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 749
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 750 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 809
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 810 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 869
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQA RYTRRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 870 TRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFV 929
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 930 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 989
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 990 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1049
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1050 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1109
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV IPYACKLLFQ
Sbjct: 1110 HFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVFIPYACKLLFQ 1169
Query: 346 ELMAMAIAPRMLTKE-EPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ + K +QKK+GA
Sbjct: 1170 ELMAMAIAPRMLTKDVKSKKKDQKKKGA 1197
>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana tomentosiformis]
Length = 1191
Score = 2230 bits (5779), Expect = 0.0
Identities = 1106/1167 (94%), Positives = 1128/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 25 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 85 YKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLIAQEK
Sbjct: 145 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEK 204
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYA+VAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 205 MSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265 PYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDY 324
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTREKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 325 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRR 384
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 385 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 444
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 505 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNG WVGIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 565 PQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKK+DI LQQRESPE+ GWHDLVAKG+ IND
Sbjct: 625 RPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMISMTIND 684
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685 LVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 745 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 804
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR++TMGMRHGSYDKLDDDGLAPPG
Sbjct: 805 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPG 864
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+Q++AQGQASRYTR+DHS SLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 865 TRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFV 924
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 925 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 984
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 985 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1044
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1164
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ + +QKK+GA
Sbjct: 1165 ELMAMAIAPRMLTKDVKQAKDQKKKGA 1191
>ref|XP_014501986.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Vigna
radiata var. radiata]
Length = 1195
Score = 2229 bits (5777), Expect = 0.0
Identities = 1105/1168 (94%), Positives = 1130/1168 (96%), Gaps = 1/1168 (0%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKK+DI LQQRESPE+ GWHDLV+KG+ IND
Sbjct: 628 RPLFIVDKQRLLIKKKDIHALQQRESPEEGGWHDLVSKGYIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARINPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQA RYTRRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV IPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVFIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKE-EPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ + K +QKK+GA
Sbjct: 1168 ELMAMAIAPRMLTKDVKSKKKDQKKKGA 1195
>ref|XP_003589372.2| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|657401188|gb|AES59623.2| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1195
Score = 2229 bits (5776), Expect = 0.0
Identities = 1102/1167 (94%), Positives = 1128/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 29 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 88
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 89 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 148
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 149 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 208
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYV EVRSMAESQNRPPSTMFVRMLSR SAKGGSSGQYIRATL
Sbjct: 209 MSTNHVYVFKKRQPNKYAYVGEVRSMAESQNRPPSTMFVRMLSRASAKGGSSGQYIRATL 268
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 269 PYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDY 328
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRG+TVGVT+EKRIKYAK+ILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 329 IGKRGSTVGVTKEKRIKYAKDILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 388
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 389 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 448
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 449 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 508
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 509 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 568
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 569 PQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 628
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKK+DI LQQRESPED GWHDLV+KGF IND
Sbjct: 629 RPLFIVDKQRLLIKKKDIHSLQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTIND 688
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 689 LVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 748
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 749 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 808
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 809 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 868
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTP++QEE QGQA+RY++RDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 869 TRVSGEDVIIGKTTPLSQEEQQGQAARYSKRDHSISLRHSETGIVDQVLLTTNADGLRFV 928
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 929 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 988
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 989 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1048
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1049 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1108
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1109 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1168
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTKE +QKK+GA
Sbjct: 1169 ELMAMAIAPRMLTKEVKAIKDQKKKGA 1195
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 2229 bits (5775), Expect = 0.0
Identities = 1101/1167 (94%), Positives = 1128/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 25 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 85 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 145 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 204
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 205 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265 PYIRTEIPIIIVFRALGFVADKDILEHICYDFADTQMMELLRPSLEEAFVIQNQQVALDY 324
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 325 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 384
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 385 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 444
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 505 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCWVGIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 565 PQATKIFVNGCWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIK++DI LQQRE+PED GWHDLVAKGF IND
Sbjct: 625 RPLFIVEKQRLLIKRKDIQALQQRETPEDGGWHDLVAKGFIEYIDTEEEETTMISMTIND 684
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LV ARL+PEEAY++TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685 LVSARLNPEEAYSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDT+AYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 745 TNYQFRMDTVAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 804
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 805 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 864
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDV+IGKTTPIAQ+EAQG A+RYTRRDHS SLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 865 TRVSGEDVVIGKTTPIAQDEAQGPAARYTRRDHSTSLRHSETGMVDQVLLTTNADGLRFV 924
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWT+EGITPDIIVNPHAIPSRMTIG
Sbjct: 925 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPSRMTIG 984
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL++M
Sbjct: 985 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSM 1044
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYR+HVCE CGLIAI NLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 1164
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELM+MAIAPRMLTK+ + ++KK+ A
Sbjct: 1165 ELMSMAIAPRMLTKDVKQAKDKKKKQA 1191
>ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
[Nicotiana sylvestris]
Length = 1191
Score = 2228 bits (5774), Expect = 0.0
Identities = 1105/1167 (94%), Positives = 1128/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 25 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 84
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT
Sbjct: 85 YKINFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 144
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECP DQGGYFIINGSEKVLIAQEK
Sbjct: 145 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPLDQGGYFIINGSEKVLIAQEK 204
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYA+VAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL
Sbjct: 205 MSTNHVYVFKKRQPNKYAFVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 264
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DTQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 265 PYIRTEIPIIIVFRALGFVADKDILEHICYDFNDTQMMELLRPSLEEAFVIQNQQVALDY 324
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVTREKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 325 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGIGEYCETKKAYYFGYIIHRLLLCALGRR 384
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 385 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTI 444
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 445 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 504
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 505 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 564
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNG WVGIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 565 PQATKIFVNGTWVGIHRDPDMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 624
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIVEKQRLLIKK+DI LQQRESPE+ GWHDLVAKG+ IND
Sbjct: 625 RPLFIVEKQRLLIKKKDIQTLQQRESPEEGGWHDLVAKGYIEYIDTEEEETTMISMTIND 684
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQARL+PEEAY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 685 LVQARLNPEEAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 744
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMN
Sbjct: 745 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMN 804
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR++TMGMRHGSYDKLDDDGLAPPG
Sbjct: 805 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPG 864
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+Q++AQGQASRYTR+DHS SLRHSETGMVDQVLLTTNADGLRFV
Sbjct: 865 TRVSGEDVIIGKTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFV 924
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 925 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 984
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 985 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1044
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1045 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1104
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKK+SFECRGCKNKTDIVQVHIPYACKLLFQ
Sbjct: 1105 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKSSFECRGCKNKTDIVQVHIPYACKLLFQ 1164
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTK+ + +QKK+GA
Sbjct: 1165 ELMAMAIAPRMLTKDVKQAKDQKKKGA 1191
>ref|XP_003533774.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max] gi|947088766|gb|KRH37431.1| hypothetical protein
GLYMA_09G066000 [Glycine max]
Length = 1192
Score = 2227 bits (5772), Expect = 0.0
Identities = 1105/1164 (94%), Positives = 1127/1164 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRVIKKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVIKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
E QDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 EAQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF TQMMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSYTQMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDIRLKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWMGIHRDPDMLVRTLKKLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKK+DI LQQRESPED GWHDLV+KGF IND
Sbjct: 628 RPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PE+AY+DTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARINPEDAYSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIV+IACYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVSIACYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQA RYTRRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKK 275
ELMAMAIAPRMLTK E K +NQKK
Sbjct: 1168 ELMAMAIAPRMLTK-EVKTTNQKK 1190
>ref|XP_003547482.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Glycine
max] gi|947063175|gb|KRH12436.1| hypothetical protein
GLYMA_15G172100 [Glycine max]
Length = 1193
Score = 2227 bits (5771), Expect = 0.0
Identities = 1105/1167 (94%), Positives = 1127/1167 (96%)
Frame = -1
Query: 3766 AWAVISSYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 3587
AWAVIS+YFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI
Sbjct: 28 AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGHQSDFAETI 87
Query: 3586 YKIGFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVTKRVIKKGHDGEEVT 3407
YKI FGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDV+KRV+KKGHDGEEVT
Sbjct: 88 YKISFGQIYLSKPMMTESDGETATLFPKAARLRNLTYSAPLYVDVSKRVVKKGHDGEEVT 147
Query: 3406 ETQDFTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 3227
ETQD TKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
Sbjct: 148 ETQDLTKVFIGKVPIMLRSSYCTLYQNSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK 207
Query: 3226 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSAKGGSSGQYIRATL 3047
MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTS+KGGSSGQYIRATL
Sbjct: 208 MSTNHVYVFKKRQPNKYAYVAEVRSMAESQNRPPSTMFVRMLSRTSSKGGSSGQYIRATL 267
Query: 3046 PYIRTEIPIIIVFRALGFVADKDILEHICYDFQDTQMMELLRPSLEEAFVIQNQQVALDY 2867
PYIRTEIPIIIVFRALGFVADKDILEHICYDF DT MMELLRPSLEEAFVIQNQQVALDY
Sbjct: 268 PYIRTEIPIIIVFRALGFVADKDILEHICYDFSDTLMMELLRPSLEEAFVIQNQQVALDY 327
Query: 2866 IGKRGATVGVTREKRIKYAKEILQKEMLPHVGTGDFCETKKAYYFGYIIHRLLLCALGRR 2687
IGKRGATVGVT+EKRIKYAKEILQKEMLPHVG G++CETKKAYYFGYIIHRLLLCALGRR
Sbjct: 328 IGKRGATVGVTKEKRIKYAKEILQKEMLPHVGVGEYCETKKAYYFGYIIHRLLLCALGRR 387
Query: 2686 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 2507
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI
Sbjct: 388 AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTI 447
Query: 2506 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 2327
TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
Sbjct: 448 TSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL 507
Query: 2326 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 2147
HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI
Sbjct: 508 HNSQWGMMCPAETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVI 567
Query: 2146 PQATKIFVNGCWVGIHRDPEMLVKTXXXXXXRVDVNTEVGVVRDIRLKELRIYTDYGRCS 1967
PQATKIFVNGCW+GIHRDP+MLV+T RVDVNTEVGVVRDI LKELRIYTDYGRCS
Sbjct: 568 PQATKIFVNGCWMGIHRDPDMLVRTLRKLRRRVDVNTEVGVVRDIILKELRIYTDYGRCS 627
Query: 1966 RPLFIVEKQRLLIKKRDIFPLQQRESPEDIGWHDLVAKGFXXXXXXXXXXXXXXXXXIND 1787
RPLFIV+KQRLLIKK+DI LQQRESPED GWHDLV+KGF IND
Sbjct: 628 RPLFIVDKQRLLIKKKDIHALQQRESPEDGGWHDLVSKGFIEYIDTEEEETTMISMTIND 687
Query: 1786 LVQARLHPEEAYTDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 1607
LVQAR++PE+AY TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV
Sbjct: 688 LVQARINPEDAYAGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV 747
Query: 1606 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 1427
TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN
Sbjct: 748 TNYQFRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMN 807
Query: 1426 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPG 1247
QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPG
Sbjct: 808 QSSIDRGFFRSLFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPG 867
Query: 1246 TRVSGEDVIIGKTTPIAQEEAQGQASRYTRRDHSISLRHSETGMVDQVLLTTNADGLRFV 1067
TRVSGEDVIIGKTTPI+QEEAQGQA RYTRRDHSISLRHSETG+VDQVLLTTNADGLRFV
Sbjct: 868 TRVSGEDVIIGKTTPISQEEAQGQALRYTRRDHSISLRHSETGIVDQVLLTTNADGLRFV 927
Query: 1066 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 887
KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG
Sbjct: 928 KVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIG 987
Query: 886 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 707
QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM
Sbjct: 988 QLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAM 1047
Query: 706 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 527
IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA
Sbjct: 1048 IFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAA 1107
Query: 526 HFLKERLFDQSDAYRVHVCEHCGLIAIGNLKKNSFECRGCKNKTDIVQVHIPYACKLLFQ 347
HFLKERLFDQSDAYRVHVCE CGLIAI NLKKNSFECRGCKNKTDIVQV+IPYACKLLFQ
Sbjct: 1108 HFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVYIPYACKLLFQ 1167
Query: 346 ELMAMAIAPRMLTKEEPKPSNQKKRGA 266
ELMAMAIAPRMLTK E K +NQKK+GA
Sbjct: 1168 ELMAMAIAPRMLTK-EVKTTNQKKKGA 1193