BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006981
         (2042 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF,...   893   0.0  
ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF,...   892   0.0  
gb|KDO48075.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   891   0.0  
gb|KDO48074.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   890   0.0  
ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF,...   890   0.0  
gb|KDO48072.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   889   0.0  
ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citr...   880   0.0  
ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citr...   879   0.0  
ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citr...   879   0.0  
gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   863   0.0  
gb|KDO48076.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   735   0.0  
gb|KDO48077.1| hypothetical protein CISIN_1g008352mg [Citrus sin...   734   0.0  
ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF,...   704   0.0  
ref|XP_011018728.1| PREDICTED: RNA polymerase sigma factor sigF,...   696   0.0  
gb|AKC88770.1| sigma factor [Francoa sonchifolia]                     685   0.0  
ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prun...   685   0.0  
ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [...   679   0.0  
ref|XP_008359645.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   677   0.0  
ref|XP_009376812.1| PREDICTED: RNA polymerase sigma factor sigF,...   676   0.0  
ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protei...   675   0.0  

>ref|XP_006493036.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X3 [Citrus sinensis]
          Length = 561

 Score =  893 bits (2307), Expect = 0.0
 Identities = 456/561 (81%), Positives = 497/561 (88%), Gaps = 8/561 (1%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA--------QQFPTSVLLREQ 1684
            MEAGRNLL+SPP FPSRT +KH+L               A        + FPTSVLL+EQ
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60

Query: 1683 RDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLN 1504
            RDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQFLHW +  N
Sbjct: 61   RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120

Query: 1503 LLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNG 1324
            L PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  LAENPKLNG
Sbjct: 121  LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAENPKLNG 180

Query: 1323 AEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLS 1144
            AEFTDISLTSSL +PLEEVKTVRS +FLERRSKKR+VSKP+VT HETY +RKA+VKKKLS
Sbjct: 181  AEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLS 240

Query: 1143 EGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEW 964
            EGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFGREPTLIEW
Sbjct: 241  EGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEW 300

Query: 963  AEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMK 784
            A+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGI LHDLLQEGSMGLMK
Sbjct: 301  AKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMK 360

Query: 783  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEG 604
            SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+S+VLEAKRL IQEG
Sbjct: 361  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEG 420

Query: 603  NHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDIN 424
            NHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT VEIPDI+
Sbjct: 421  NHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDIS 480

Query: 423  VQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRA 244
            VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKERVRQLESRA
Sbjct: 481  VQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRA 540

Query: 243  LYRLKQCLGSQAVDGYADLLI 181
            LYRLKQ LG +A  GYADLLI
Sbjct: 541  LYRLKQSLGGKASYGYADLLI 561


>ref|XP_006493035.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Citrus sinensis]
          Length = 569

 Score =  892 bits (2305), Expect = 0.0
 Identities = 456/569 (80%), Positives = 497/569 (87%), Gaps = 16/569 (2%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ----------------FP 1708
            MEAGRNLL+SPP FPSRT +KH+L                +Q                FP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 1707 TSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQF 1528
            TSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQF
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 1527 LHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLL 1348
            LHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 1347 AENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRK 1168
            AENPKLNGAEFTDISLTSSL +PLEEVKTVRS +FLERRSKKR+VSKP+VT HETY +RK
Sbjct: 181  AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSRK 240

Query: 1167 AAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFG 988
            A+VKKKLSEGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFG
Sbjct: 241  ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 987  REPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQ 808
            REPTLIEWA+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGI LHDLLQ
Sbjct: 301  REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 360

Query: 807  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEA 628
            EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+S+VLEA
Sbjct: 361  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 420

Query: 627  KRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADT 448
            KRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT
Sbjct: 421  KRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADT 480

Query: 447  RVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKER 268
             VEIPDI+VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKER
Sbjct: 481  GVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKER 540

Query: 267  VRQLESRALYRLKQCLGSQAVDGYADLLI 181
            VRQLESRALYRLKQ LG +A  GYADLLI
Sbjct: 541  VRQLESRALYRLKQSLGGKASYGYADLLI 569


>gb|KDO48075.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 558

 Score =  891 bits (2302), Expect = 0.0
 Identities = 455/558 (81%), Positives = 493/558 (88%), Gaps = 5/558 (0%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA-----QQFPTSVLLREQRDE 1675
            MEAGRNLL+SPP FPSRT +KH+L                     + FPTSVLL+EQRDE
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVASVPTSSVARHFPTSVLLQEQRDE 60

Query: 1674 YRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLNLLP 1495
            YRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQFLHW +  NL P
Sbjct: 61   YRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSP 120

Query: 1494 PVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNGAEF 1315
            P++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  LAENPKLNGAEF
Sbjct: 121  PMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEF 180

Query: 1314 TDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLSEGF 1135
            TDISLTSSL +PLEEVK     RFLERRSKKR+VSKPQVT HETY +RKA+VKKKLSEGF
Sbjct: 181  TDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETYNSRKASVKKKLSEGF 240

Query: 1134 DPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEWAEA 955
            D NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFGREPTLIEWA+A
Sbjct: 241  DRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEWAKA 300

Query: 954  VGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMKSVE 775
            +GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGISLHDLLQEGSMGLMKSVE
Sbjct: 301  IGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMKSVE 360

Query: 774  KFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEGNHS 595
            KFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+SKVLEAKRL IQEGNHS
Sbjct: 361  KFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEAKRLYIQEGNHS 420

Query: 594  PKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDINVQK 415
            P KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT VEIPDI+VQK
Sbjct: 421  PDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQK 480

Query: 414  QLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRALYR 235
            QLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKERVRQLESRALYR
Sbjct: 481  QLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYR 540

Query: 234  LKQCLGSQAVDGYADLLI 181
            LKQ LG +A  GYADLLI
Sbjct: 541  LKQSLGGKASYGYADLLI 558


>gb|KDO48074.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 561

 Score =  890 bits (2299), Expect = 0.0
 Identities = 456/561 (81%), Positives = 494/561 (88%), Gaps = 8/561 (1%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA--------QQFPTSVLLREQ 1684
            MEAGRNLL+SPP FPSRT +KH+L               A        + FPTSVLL+EQ
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60

Query: 1683 RDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLN 1504
            RDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQFLHW +  N
Sbjct: 61   RDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120

Query: 1503 LLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNG 1324
            L PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  LAENPKLNG
Sbjct: 121  LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAENPKLNG 180

Query: 1323 AEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLS 1144
            AEFTDISLTSSL +PLEEVK     RFLERRSKKR+VSKPQVT HETY +RKA+VKKKLS
Sbjct: 181  AEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETYNSRKASVKKKLS 240

Query: 1143 EGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEW 964
            EGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFGREPTLIEW
Sbjct: 241  EGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLIEW 300

Query: 963  AEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMK 784
            A+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGISLHDLLQEGSMGLMK
Sbjct: 301  AKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGISLHDLLQEGSMGLMK 360

Query: 783  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEG 604
            SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+SKVLEAKRL IQEG
Sbjct: 361  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEAKRLYIQEG 420

Query: 603  NHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDIN 424
            NHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT VEIPDI+
Sbjct: 421  NHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDIS 480

Query: 423  VQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRA 244
            VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKERVRQLESRA
Sbjct: 481  VQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRA 540

Query: 243  LYRLKQCLGSQAVDGYADLLI 181
            LYRLKQ LG +A  GYADLLI
Sbjct: 541  LYRLKQSLGGKASYGYADLLI 561


>ref|XP_006493034.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Citrus sinensis]
          Length = 570

 Score =  890 bits (2299), Expect = 0.0
 Identities = 455/570 (79%), Positives = 496/570 (87%), Gaps = 17/570 (2%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ-----------------F 1711
            MEAGRNLL+SPP FPSRT +KH+L                 +                 F
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAVLMHNEQSAPAVASVPTSSVARHF 60

Query: 1710 PTSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQ 1531
            PTSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQ
Sbjct: 61   PTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQ 120

Query: 1530 FLHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVL 1351
            FLHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  
Sbjct: 121  FLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAAS 180

Query: 1350 LAENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATR 1171
            LAENPKLNGAEFTDISLTSSL +PLEEVKTVRS +FLERRSKKR+VSKP+VT HETY +R
Sbjct: 181  LAENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTQFLERRSKKRKVSKPKVTNHETYNSR 240

Query: 1170 KAAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQF 991
            KA+VKKKLSEGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQF
Sbjct: 241  KASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQF 300

Query: 990  GREPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLL 811
            GREPTLIEWA+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGI LHDLL
Sbjct: 301  GREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLL 360

Query: 810  QEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLE 631
            QEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+S+VLE
Sbjct: 361  QEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLE 420

Query: 630  AKRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITAD 451
            AKRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITAD
Sbjct: 421  AKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITAD 480

Query: 450  TRVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKE 271
            T VEIPDI+VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKE
Sbjct: 481  TGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKE 540

Query: 270  RVRQLESRALYRLKQCLGSQAVDGYADLLI 181
            RVRQLESRALYRLKQ LG +A  GYADLLI
Sbjct: 541  RVRQLESRALYRLKQSLGGKASYGYADLLI 570


>gb|KDO48072.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 569

 Score =  889 bits (2297), Expect = 0.0
 Identities = 456/569 (80%), Positives = 494/569 (86%), Gaps = 16/569 (2%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ----------------FP 1708
            MEAGRNLL+SPP FPSRT +KH+L                +Q                FP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 1707 TSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQF 1528
            TSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQF
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 1527 LHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLL 1348
            LHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 1347 AENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRK 1168
            AENPKLNGAEFTDISLTSSL +PLEEVK     RFLERRSKKR+VSKPQVT HETY +RK
Sbjct: 181  AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETYNSRK 240

Query: 1167 AAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFG 988
            A+VKKKLSEGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFG
Sbjct: 241  ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 987  REPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQ 808
            REPTLIEWA+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGISLHDLLQ
Sbjct: 301  REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGISLHDLLQ 360

Query: 807  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEA 628
            EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+SKVLEA
Sbjct: 361  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEA 420

Query: 627  KRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADT 448
            KRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT
Sbjct: 421  KRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADT 480

Query: 447  RVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKER 268
             VEIPDI+VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKER
Sbjct: 481  GVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKER 540

Query: 267  VRQLESRALYRLKQCLGSQAVDGYADLLI 181
            VRQLESRALYRLKQ LG +A  GYADLLI
Sbjct: 541  VRQLESRALYRLKQSLGGKASYGYADLLI 569


>ref|XP_006428730.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530787|gb|ESR41970.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 558

 Score =  880 bits (2275), Expect = 0.0
 Identities = 452/558 (81%), Positives = 490/558 (87%), Gaps = 5/558 (0%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA-----QQFPTSVLLREQRDE 1675
            MEAGRNLL+SPP FPSRT +KH+L                     + FPTSVLL+EQRDE
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVASVPTSSVARHFPTSVLLQEQRDE 60

Query: 1674 YRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLNLLP 1495
            YRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQFLHW +  NL P
Sbjct: 61   YRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWNLSP 120

Query: 1494 PVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNGAEF 1315
            P++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  LAENPKLNGAEF
Sbjct: 121  PMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAENPKLNGAEF 180

Query: 1314 TDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLSEGF 1135
            TDISLTSSL +PLEEVKTVRS RFLERRSKKR+VSKP+VT HETY +RKA+VKKKLSEGF
Sbjct: 181  TDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLSEGF 240

Query: 1134 DPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEWAEA 955
            DPNDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFGREPTLI     
Sbjct: 241  DPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLILKLLR 300

Query: 954  VGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMKSVE 775
              LSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGI LHDLLQEGSMGLMKSVE
Sbjct: 301  FHLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMKSVE 360

Query: 774  KFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEGNHS 595
            KFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+S+VLEAKRL IQEGNHS
Sbjct: 361  KFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEGNHS 420

Query: 594  PKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDINVQK 415
            P KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT VEIPDI+VQK
Sbjct: 421  PDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDISVQK 480

Query: 414  QLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRALYR 235
            QLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKERVRQLESRALYR
Sbjct: 481  QLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRALYR 540

Query: 234  LKQCLGSQAVDGYADLLI 181
            LKQ LG +A  GYADLLI
Sbjct: 541  LKQSLGGKASYGYADLLI 558


>ref|XP_006428732.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530789|gb|ESR41972.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 561

 Score =  879 bits (2272), Expect = 0.0
 Identities = 453/561 (80%), Positives = 491/561 (87%), Gaps = 8/561 (1%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA--------QQFPTSVLLREQ 1684
            MEAGRNLL+SPP FPSRT +KH+L               A        + FPTSVLL+EQ
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSAPAVASVPTSSVARHFPTSVLLQEQ 60

Query: 1683 RDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLN 1504
            RDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQFLHW +  N
Sbjct: 61   RDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQFLHWPDLWN 120

Query: 1503 LLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNG 1324
            L PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  LAENPKLNG
Sbjct: 121  LSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASLAENPKLNG 180

Query: 1323 AEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLS 1144
            AEFTDISLTSSL +PLEEVKTVRS RFLERRSKKR+VSKP+VT HETY +RKA+VKKKLS
Sbjct: 181  AEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRKASVKKKLS 240

Query: 1143 EGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEW 964
            EGFDPNDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFGREPTLI  
Sbjct: 241  EGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFGREPTLILK 300

Query: 963  AEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMK 784
                 LSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGI LHDLLQEGSMGLMK
Sbjct: 301  LLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQEGSMGLMK 360

Query: 783  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEG 604
            SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+S+VLEAKRL IQEG
Sbjct: 361  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEAKRLYIQEG 420

Query: 603  NHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDIN 424
            NHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT VEIPDI+
Sbjct: 421  NHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADTGVEIPDIS 480

Query: 423  VQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRA 244
            VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKERVRQLESRA
Sbjct: 481  VQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKERVRQLESRA 540

Query: 243  LYRLKQCLGSQAVDGYADLLI 181
            LYRLKQ LG +A  GYADLLI
Sbjct: 541  LYRLKQSLGGKASYGYADLLI 561


>ref|XP_006428731.1| hypothetical protein CICLE_v10011376mg [Citrus clementina]
            gi|557530788|gb|ESR41971.1| hypothetical protein
            CICLE_v10011376mg [Citrus clementina]
          Length = 569

 Score =  879 bits (2270), Expect = 0.0
 Identities = 453/569 (79%), Positives = 491/569 (86%), Gaps = 16/569 (2%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ----------------FP 1708
            MEAGRNLL+SPP FPSRT +KH+L                +Q                FP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 1707 TSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQF 1528
            TSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQF
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNMETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 1527 LHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLL 1348
            LHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 1347 AENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRK 1168
            AENPKLNGAEFTDISLTSSL +PLEEVKTVRS RFLERRSKKR+VSKP+VT HETY +RK
Sbjct: 181  AENPKLNGAEFTDISLTSSLGYPLEEVKTVRSTRFLERRSKKRKVSKPKVTNHETYNSRK 240

Query: 1167 AAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFG 988
            A+VKKKLSEGFDPNDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFG
Sbjct: 241  ASVKKKLSEGFDPNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 987  REPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQ 808
            REPTLI       LSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGI LHDLLQ
Sbjct: 301  REPTLILKLLRFHLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGIGLHDLLQ 360

Query: 807  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEA 628
            EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+S+VLEA
Sbjct: 361  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSRVLEA 420

Query: 627  KRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADT 448
            KRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEITADT
Sbjct: 421  KRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEITADT 480

Query: 447  RVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKER 268
             VEIPDI+VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGLSKER
Sbjct: 481  GVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGLSKER 540

Query: 267  VRQLESRALYRLKQCLGSQAVDGYADLLI 181
            VRQLESRALYRLKQ LG +A  GYADLLI
Sbjct: 541  VRQLESRALYRLKQSLGGKASYGYADLLI 569


>gb|KDO48082.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 532

 Score =  863 bits (2231), Expect = 0.0
 Identities = 436/513 (84%), Positives = 471/513 (91%)
 Frame = -3

Query: 1719 QQFPTSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDL 1540
            + FPTSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDL
Sbjct: 20   RHFPTSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQLVQDL 79

Query: 1539 EHQFLHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKE 1360
            EHQFLHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKE
Sbjct: 80   EHQFLHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKE 139

Query: 1359 AVLLAENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETY 1180
            A  LAENPKLNGAEFTDISLTSSL +PLEEVK     RFLERRSKKR+VSKPQVT HETY
Sbjct: 140  AASLAENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETY 199

Query: 1179 ATRKAAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQ 1000
             +RKA+VKKKLSEGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQ
Sbjct: 200  NSRKASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQ 259

Query: 999  SQFGREPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLH 820
            SQFGREPTLIEWA+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGISLH
Sbjct: 260  SQFGREPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGISLH 319

Query: 819  DLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSK 640
            DLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+SK
Sbjct: 320  DLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSK 379

Query: 639  VLEAKRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEI 460
            VLEAKRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQEI
Sbjct: 380  VLEAKRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQEI 439

Query: 459  TADTRVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGL 280
            TADT VEIPDI+VQKQLMRQH+RNL+++LNPKER I+RLRFGIEDG PKSLSE+GNIFGL
Sbjct: 440  TADTGVEIPDISVQKQLMRQHVRNLLTLLNPKERCIVRLRFGIEDGKPKSLSEVGNIFGL 499

Query: 279  SKERVRQLESRALYRLKQCLGSQAVDGYADLLI 181
            SKERVRQLESRALYRLKQ LG +A  GYADLLI
Sbjct: 500  SKERVRQLESRALYRLKQSLGGKASYGYADLLI 532


>gb|KDO48076.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 482

 Score =  735 bits (1897), Expect = 0.0
 Identities = 377/479 (78%), Positives = 407/479 (84%), Gaps = 16/479 (3%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ----------------FP 1708
            MEAGRNLL+SPP FPSRT +KH+L                +Q                FP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 1707 TSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQF 1528
            TSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQF
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 1527 LHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLL 1348
            LHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 1347 AENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRK 1168
            AENPKLNGAEFTDISLTSSL +PLEEVK     RFLERRSKKR+VSKPQVT HETY +RK
Sbjct: 181  AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETYNSRK 240

Query: 1167 AAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFG 988
            A+VKKKLSEGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFG
Sbjct: 241  ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 987  REPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQ 808
            REPTLIEWA+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGISLHDLLQ
Sbjct: 301  REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGISLHDLLQ 360

Query: 807  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEA 628
            EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+SKVLEA
Sbjct: 361  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEA 420

Query: 627  KRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITAD 451
            KRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQ    D
Sbjct: 421  KRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQSTFLD 479


>gb|KDO48077.1| hypothetical protein CISIN_1g008352mg [Citrus sinensis]
          Length = 488

 Score =  734 bits (1895), Expect = 0.0
 Identities = 376/474 (79%), Positives = 406/474 (85%), Gaps = 16/474 (3%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ----------------FP 1708
            MEAGRNLL+SPP FPSRT +KH+L                +Q                FP
Sbjct: 1    MEAGRNLLSSPPSFPSRTRVKHSLSSSASSSSSSSVLMHNEQSAPAVASVPTSSVARHFP 60

Query: 1707 TSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQF 1528
            TSVLL+EQRDEYRPLLH FKEDKTSQATSD R  + E FF+EE NS DLDQLVQDLEHQF
Sbjct: 61   TSVLLQEQRDEYRPLLHMFKEDKTSQATSDSRNIETEAFFVEEKNSGDLDQLVQDLEHQF 120

Query: 1527 LHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLL 1348
            LHW +  NL PP++  EDPS+SLTMQ L+ DTEE +D EPF+ VALARKALSASKEA  L
Sbjct: 121  LHWPDLWNLSPPMKRGEDPSVSLTMQSLSNDTEESVDAEPFDAVALARKALSASKEAASL 180

Query: 1347 AENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRK 1168
            AENPKLNGAEFTDISLTSSL +PLEEVK     RFLERRSKKR+VSKPQVT HETY +RK
Sbjct: 181  AENPKLNGAEFTDISLTSSLGYPLEEVKQFSQPRFLERRSKKRKVSKPQVTNHETYNSRK 240

Query: 1167 AAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFG 988
            A+VKKKLSEGFD NDPLRLFLWGPETR+LLTA+EE ELIAQIQDLI+LEKEKSKLQSQFG
Sbjct: 241  ASVKKKLSEGFDRNDPLRLFLWGPETRKLLTADEEFELIAQIQDLIRLEKEKSKLQSQFG 300

Query: 987  REPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQ 808
            REPTLIEWA+A+GLSCRDLKSELHSGNSSREKL+NANLRLVVHVAK+YQGRGISLHDLLQ
Sbjct: 301  REPTLIEWAKAIGLSCRDLKSELHSGNSSREKLINANLRLVVHVAKQYQGRGISLHDLLQ 360

Query: 807  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEA 628
            EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPEN+YTL+SKVLEA
Sbjct: 361  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENIYTLLSKVLEA 420

Query: 627  KRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQ 466
            KRL IQEGNHSP KEDLA+RVGITVEKLERL+F+TRMPLSMQQPVWADQ TTFQ
Sbjct: 421  KRLYIQEGNHSPDKEDLARRVGITVEKLERLIFITRMPLSMQQPVWADQDTTFQ 474


>ref|XP_011018731.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Populus euphratica]
          Length = 557

 Score =  704 bits (1818), Expect = 0.0
 Identities = 358/560 (63%), Positives = 439/560 (78%), Gaps = 8/560 (1%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA--------QQFPTSVLLREQ 1684
            MEAGR LL+S P FP+RTHLK++L                        Q FPTSVLL+EQ
Sbjct: 1    MEAGRTLLSSSPSFPTRTHLKNSLCSSVLILREQATPAVTAIPTTSTAQHFPTSVLLQEQ 60

Query: 1683 RDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLN 1504
            RDE+RPL + FKED+ SQAT DRR+ +  T   E  +S +LDQ+V++ E+Q  HW    N
Sbjct: 61   RDEFRPLQNIFKEDRPSQATLDRRKTEIGTSGHEGKDSDELDQMVENFEYQLHHWPTYWN 120

Query: 1503 LLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNG 1324
            LLPP Q  ++PS+S T Q +T  T++ +DVEP +V+ LA++ALSASK A  LA+N     
Sbjct: 121  LLPPSQKGQNPSMSFTTQSVTRSTDKLIDVEPTDVINLAKRALSASKHAAFLADN----S 176

Query: 1323 AEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLS 1144
             +  +++ TSS +F LEEV+ VRS R L R+S  RRV K +  + ETY ++ A V+K+LS
Sbjct: 177  TDLDNLASTSSSSFSLEEVRIVRSRRHLARQSLNRRVPKTKDMIFETYDSKSADVQKRLS 236

Query: 1143 EGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEW 964
            +GFDPNDPLRLFLWGPET+QLLTA+EE ELIAQIQDL+ LE  K++L+SQFGREPTL+EW
Sbjct: 237  QGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEW 296

Query: 963  AEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMK 784
            A+AVGLSC  LK +LHSGN SREKL+NANLR+VVH+AKRYQ RG+ L DLLQEG++GLMK
Sbjct: 297  AQAVGLSCSVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMK 356

Query: 783  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEG 604
            S+EKFKPQAGCRFA+YAYWW+RQTI KAIFQHSRTIRLPENVY L+ KV+EAKR  IQEG
Sbjct: 357  SIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEG 416

Query: 603  NHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDIN 424
            NH P  E++A+RVGI ++KLE+L+  TR PLSMQQ VW+DQ TTFQEITADT +EIPD++
Sbjct: 417  NHQPTTEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDVS 476

Query: 423  VQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRA 244
            V KQLMR+HIR L++IL+ KERRIIRLRFGIEDG  KSLSEIGN+FGLSKERVRQLESRA
Sbjct: 477  VAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRA 536

Query: 243  LYRLKQCLGSQAVDGYADLL 184
            LY+LKQC+GS  +D YADLL
Sbjct: 537  LYKLKQCVGSHGLDAYADLL 556


>ref|XP_011018728.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Populus euphratica] gi|743810385|ref|XP_011018729.1|
            PREDICTED: RNA polymerase sigma factor sigF,
            chloroplastic isoform X1 [Populus euphratica]
            gi|743810387|ref|XP_011018730.1| PREDICTED: RNA
            polymerase sigma factor sigF, chloroplastic isoform X1
            [Populus euphratica]
          Length = 570

 Score =  696 bits (1795), Expect = 0.0
 Identities = 359/573 (62%), Positives = 441/573 (76%), Gaps = 21/573 (3%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA--------QQFPTSVLLREQ 1684
            MEAGR LL+S P FP+RTHLK++L                        Q FPTSVLL+EQ
Sbjct: 1    MEAGRTLLSSSPSFPTRTHLKNSLCSSVLILREQATPAVTAIPTTSTAQHFPTSVLLQEQ 60

Query: 1683 RDEYRPLLHFFKEDKTSQATSDRRQA----------DNE---TFFLEENNSSDLDQLVQD 1543
            RDE+RPL + FKED+ SQAT DRR+           D++   T   E  +S +LDQ+V++
Sbjct: 61   RDEFRPLQNIFKEDRPSQATLDRRKTEIGTSGHEGKDSDEIGTSGHEGKDSDELDQMVEN 120

Query: 1542 LEHQFLHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASK 1363
             E+Q  HW    NLLPP Q  ++PS+S T Q +T  T++ +DVEP +V+ LA++ALSASK
Sbjct: 121  FEYQLHHWPTYWNLLPPSQKGQNPSMSFTTQSVTRSTDKLIDVEPTDVINLAKRALSASK 180

Query: 1362 EAVLLAENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHET 1183
             A  LA+N      +  +++ TSS +F LEEV+ VRS R L R+S  RRV K +  + ET
Sbjct: 181  HAAFLADN----STDLDNLASTSSSSFSLEEVRIVRSRRHLARQSLNRRVPKTKDMIFET 236

Query: 1182 YATRKAAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKL 1003
            Y ++ A V+K+LS+GFDPNDPLRLFLWGPET+QLLTA+EE ELIAQIQDL+ LE  K++L
Sbjct: 237  YDSKSADVQKRLSQGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRL 296

Query: 1002 QSQFGREPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISL 823
            +SQFGREPTL+EWA+AVGLSC  LK +LHSGN SREKL+NANLR+VVH+AKRYQ RG+ L
Sbjct: 297  ESQFGREPTLVEWAQAVGLSCSVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGL 356

Query: 822  HDLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVS 643
             DLLQEG++GLMKS+EKFKPQAGCRFA+YAYWW+RQTI KAIFQHSRTIRLPENVY L+ 
Sbjct: 357  QDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLG 416

Query: 642  KVLEAKRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQE 463
            KV+EAKR  IQEGNH P  E++A+RVGI ++KLE+L+  TR PLSMQQ VW+DQ TTFQE
Sbjct: 417  KVMEAKRSYIQEGNHQPTTEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQE 476

Query: 462  ITADTRVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFG 283
            ITADT +EIPD++V KQLMR+HIR L++IL+ KERRIIRLRFGIEDG  KSLSEIGN+FG
Sbjct: 477  ITADTEIEIPDVSVAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQKSLSEIGNVFG 536

Query: 282  LSKERVRQLESRALYRLKQCLGSQAVDGYADLL 184
            LSKERVRQLESRALY+LKQC+GS  +D YADLL
Sbjct: 537  LSKERVRQLESRALYKLKQCVGSHGLDAYADLL 569


>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
          Length = 549

 Score =  685 bits (1768), Expect = 0.0
 Identities = 360/560 (64%), Positives = 425/560 (75%), Gaps = 7/560 (1%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQFPTSVLLREQRDEYRPLL 1660
            MEAGRNLL SPPPFP RTH                    A+ FPTSVLLREQR+EYR L 
Sbjct: 1    MEAGRNLLVSPPPFPQRTHAS------APAATSMPTTSLARNFPTSVLLREQREEYRVLC 54

Query: 1659 HFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLNLLPPVQTA 1480
            H  KE++TS+AT D RQ  N    ++E  S + DQLVQD E + L W     + P +QT 
Sbjct: 55   HILKEERTSEATLDMRQMLNGA--VQEEISDNSDQLVQDFERRLLQWPGLWPIFPSLQTG 112

Query: 1479 EDPSLSLTMQLLT--IDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKL-----NGA 1321
              PS SL MQ +T   D E+    E     ALA K+LSASK+A  L    KL     +G 
Sbjct: 113  GSPSSSLAMQPVTPTTDGEKSAGTESCLAAALAMKSLSASKQAAPLLNESKLARVNGDGL 172

Query: 1320 EFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLSE 1141
                +   S ++ PL++V+ VRS R LERRSKKR    P+V VHET+ +R+  +K+K SE
Sbjct: 173  PAPSLDPASLVSVPLDKVRIVRSTRLLERRSKKR---VPKVGVHETFHSRRTDIKRKSSE 229

Query: 1140 GFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEWA 961
            GFDPNDPLR+FLWGPET+QLLTA+EE ELI  IQD+++LE+ KS+L SQFG EPTLIEWA
Sbjct: 230  GFDPNDPLRMFLWGPETKQLLTAKEEFELIDHIQDMMKLEEVKSRLLSQFGHEPTLIEWA 289

Query: 960  EAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMKS 781
            EA G+SCR L+S+L + N SREKL+NANLR+VVH+AK+Y G+G+S  DLLQEGSMGLMKS
Sbjct: 290  EAAGISCRVLQSQLRTANKSREKLINANLRMVVHIAKQYLGKGLSFPDLLQEGSMGLMKS 349

Query: 780  VEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEGN 601
            VEKFKPQAGCRFA+YAYWW+RQT+RKAIFQHSRTIRLPENVYTL+ KVLEAK+ CIQEGN
Sbjct: 350  VEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYTLLGKVLEAKKSCIQEGN 409

Query: 600  HSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDINV 421
            H P KE+LA+RVGITVEKLE+L++ TRMPLSMQQPVWA Q TTFQEI ADT +EIPDI+V
Sbjct: 410  HRPTKEELARRVGITVEKLEKLLYTTRMPLSMQQPVWAGQDTTFQEIIADTEIEIPDISV 469

Query: 420  QKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRAL 241
             KQ+MRQH+RNL+SIL+PKERRIIRLRFGIEDG  KSLSEIG +FGLSKERVRQLESRAL
Sbjct: 470  GKQMMRQHVRNLLSILSPKERRIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQLESRAL 529

Query: 240  YRLKQCLGSQAVDGYADLLI 181
            YRLKQCL SQ +  Y DLL+
Sbjct: 530  YRLKQCLSSQGLGAYTDLLV 549


>ref|XP_007204994.1| hypothetical protein PRUPE_ppa003513mg [Prunus persica]
            gi|462400636|gb|EMJ06193.1| hypothetical protein
            PRUPE_ppa003513mg [Prunus persica]
          Length = 568

 Score =  685 bits (1767), Expect = 0.0
 Identities = 357/569 (62%), Positives = 438/569 (76%), Gaps = 16/569 (2%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTL-------------XXXXXXXXXXXXXXXAQQFPTSV 1699
            MEAGR+ L+S   FPS THL+H L                            A+ FPTSV
Sbjct: 1    MEAGRHFLSSSSAFPSTTHLRHPLPSSSPSTSVLMLHEQAVPAVTSVPITSVARHFPTSV 60

Query: 1698 LLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHW 1519
            LL+EQRDE++PLLH  KEDKTS+A  DR Q +      E+ +  D   LV   + Q L+ 
Sbjct: 61   LLQEQRDEFKPLLHVLKEDKTSEAALDRMQIETGASVHEDLDIDDFYPLVNSSKPQLLN- 119

Query: 1518 KESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAEN 1339
             + L++   +QT   PS  LT++ LT  + + MDVEP NVVALA+KALSAS+EA  LAE+
Sbjct: 120  HDILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSASREAASLAED 179

Query: 1338 PKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKK---RRVSKPQVTVHETYATRK 1168
             +  GA+F D+  TS   + +EE KTVRS R LERR K+   R+V K +V  HE+ +   
Sbjct: 180  SQSMGADFDDLGYTSLANWIVEEEKTVRSTRILERRRKRIKTRKVPKSKVIGHESNSFTG 239

Query: 1167 AAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFG 988
            + V+KK+SEGF+PNDPLRLFLWGPETRQLLTA+EE+ELIA++QDL +LE+ KS+LQ+QFG
Sbjct: 240  SDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEEVKSRLQTQFG 299

Query: 987  REPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQ 808
            REPTLIEWAEAVG+SC+ LKS+L SG SSREKL+ ANLR+VVH+AK+YQGRG+ L DL+Q
Sbjct: 300  REPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQDLMQ 359

Query: 807  EGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEA 628
            EGSMGLMKSVEKFKPQAGCRFA+YAYWW+RQT+RKAIFQHSRTIRLPENVY+L+ KVLEA
Sbjct: 360  EGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYSLLGKVLEA 419

Query: 627  KRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADT 448
            K+ CIQEGNH+P KE+LA+RVGITVEKLE+L++ TRMPLSMQQPVWADQ TTFQE+TADT
Sbjct: 420  KKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQDTTFQEVTADT 479

Query: 447  RVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKER 268
             VEIPD++V KQLMRQH+R+L+SILN +ER IIRLR+GIEDG  +SLSEIG +FGLSKER
Sbjct: 480  GVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLSEIGGMFGLSKER 539

Query: 267  VRQLESRALYRLKQCLGSQAVDGYADLLI 181
            VRQLESRA  +L+Q LGSQ +  Y  LL+
Sbjct: 540  VRQLESRAFLKLRQSLGSQGLGAYGPLLV 568


>ref|XP_007027376.1| RNA polymerase sigma factor rpoD, putative [Theobroma cacao]
            gi|508715981|gb|EOY07878.1| RNA polymerase sigma factor
            rpoD, putative [Theobroma cacao]
          Length = 568

 Score =  679 bits (1751), Expect = 0.0
 Identities = 354/571 (61%), Positives = 441/571 (77%), Gaps = 18/571 (3%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA------------QQFPTSVL 1696
            MEA RNLL+ PP F +RT LK ++               A            + FPTSVL
Sbjct: 1    MEAARNLLSPPPTFSTRTQLKSSVFSTSSSSVLMFHEQAAPAATSIPITSVARHFPTSVL 60

Query: 1695 LREQRDEYRPL--LHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLH 1522
            L+EQRD+YRPL  LHFFKEDK     +D++Q +N     EEN S++  QL    E + L 
Sbjct: 61   LQEQRDDYRPLPVLHFFKEDKAYPGATDKQQIENGASLNEENASNNFGQL--GFEKKLLQ 118

Query: 1521 WKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAE 1342
            W +   LL  +++ E+PS +  MQ +  DT+E +DVEP N+VALA+KALSASK+A  L+E
Sbjct: 119  WPDLTQLLSLLESEENPSSTSNMQSVAADTKEIVDVEPSNIVALAKKALSASKQAASLSE 178

Query: 1341 NPKLNGAEFTDISLTS--SLTFPLE--EVKTVRSNRFLERRSKKRRVSKPQVTVHETYAT 1174
            + KL+  +    SL S  S T P+E  EV TVRS R LER+SK+RRV +P+VT+ ETY++
Sbjct: 179  DLKLDLDDSLSNSLGSANSCTLPVEKEEVVTVRSTRRLERQSKRRRV-QPKVTIRETYSS 237

Query: 1173 RKAAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQ 994
            R+  V++KLSEGFDPNDPLRLFLWGPET+QLLTA+EESEL  Q+Q+L++LEK KSKLQSQ
Sbjct: 238  RRTDVRRKLSEGFDPNDPLRLFLWGPETKQLLTAKEESELSNQVQNLMRLEKVKSKLQSQ 297

Query: 993  FGREPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDL 814
            FGREPTL+EWAEA+GL C  L++ELHSGNSSR+KL+ ANLR+VVH+AK+YQ RG+SL DL
Sbjct: 298  FGREPTLVEWAEAIGLRCSALQAELHSGNSSRDKLIYANLRMVVHIAKQYQSRGLSLQDL 357

Query: 813  LQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVL 634
            LQEGSMGLMKSVE+FKPQ GCRFA+YAYWW+RQTIRK+I QHSRT+RLPENV+TL+SKVL
Sbjct: 358  LQEGSMGLMKSVERFKPQVGCRFATYAYWWIRQTIRKSIMQHSRTVRLPENVHTLLSKVL 417

Query: 633  EAKRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITA 454
            +AK+  I+EGNH P KE+LA+RVGITVEKL++L+F TRMPLSMQQ VW DQ  TFQE+T 
Sbjct: 418  DAKKSYIREGNHCPSKEELARRVGITVEKLDKLLFTTRMPLSMQQSVWVDQDITFQEVTP 477

Query: 453  DTRVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSK 274
            DT +EIPD++V KQLMRQH+RNL+S+L+P+ER II+LRFGIE+    SLSEIGN+FGLSK
Sbjct: 478  DTGIEIPDVSVAKQLMRQHVRNLLSVLSPRERTIIKLRFGIEESKENSLSEIGNMFGLSK 537

Query: 273  ERVRQLESRALYRLKQCLGSQAVDGYADLLI 181
            ERVRQLESRALY+LKQCL    +  Y DLL+
Sbjct: 538  ERVRQLESRALYKLKQCLNKHGLGAYVDLLV 568


>ref|XP_008359645.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase sigma factor sigF,
            chloroplastic-like [Malus domestica]
          Length = 571

 Score =  677 bits (1748), Expect = 0.0
 Identities = 354/572 (61%), Positives = 432/572 (75%), Gaps = 19/572 (3%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ----------------FP 1708
            ME GR+ L+S   FPS THL+H L                +Q                FP
Sbjct: 1    MEVGRHFLSSSSAFPSTTHLRHPLPSSPSSSSSTSVLMLHEQATPAVTSVPITFVARHFP 60

Query: 1707 TSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQF 1528
            TSVLL+EQRDE++PLLH  KE+KTSQAT DR Q +      E+       QLV+D EHQ 
Sbjct: 61   TSVLLQEQRDEFKPLLHALKEEKTSQATLDRMQIEARASLNEDLKIDGFYQLVKDSEHQL 120

Query: 1527 LHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLL 1348
            L+    L++   +QT    S  LTM+ +T  + + MD++P + VALA+KALSASKEAV  
Sbjct: 121  LNRSGLLDVFSSLQTRVKSSALLTMEPITTASSKHMDIKPSDAVALAKKALSASKEAVSF 180

Query: 1347 AENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRS---KKRRVSKPQVTVHETYA 1177
            AE+ K  G     +S      + +E+ KTVRS R LERR    KK+RVSK +V +HET  
Sbjct: 181  AEDSKSMGDXLMTVSEGLD-NWLVEDEKTVRSARLLERRRRRLKKKRVSKSKVLIHETNG 239

Query: 1176 TRKAAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQS 997
               + V+KK++EG +PNDPLRLFLWGPET+QLLTA+EE+ELIAQ+QDL +LE+ KS+LQS
Sbjct: 240  PTSSDVRKKINEGLNPNDPLRLFLWGPETKQLLTAKEEAELIAQVQDLFKLEEVKSRLQS 299

Query: 996  QFGREPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHD 817
            QFGREPTL+EWAEAVG+SC+ LKS+L SG SSREKL+ ANLR+VVH+AK+YQGRG+ L D
Sbjct: 300  QFGREPTLVEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQD 359

Query: 816  LLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKV 637
            L+QEGSMGLMKSVEKFKPQAGCRFA+YAYWW+RQT+RKAIFQHSRTIRLPENVYTL+ KV
Sbjct: 360  LMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYTLLGKV 419

Query: 636  LEAKRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEIT 457
            LEAK+ CIQEGNH+P KE+LA+RVGITVEKL++L++ TRMPLSMQQPVWADQ TTFQEIT
Sbjct: 420  LEAKKSCIQEGNHNPNKEELARRVGITVEKLQKLLYSTRMPLSMQQPVWADQDTTFQEIT 479

Query: 456  ADTRVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLS 277
            ADT  EIP ++V+KQLMRQH+R+L+ ILN +ER+IIRLRFGIEDG  +SLSEIGN+FGLS
Sbjct: 480  ADTGTEIPHVSVEKQLMRQHVRHLLGILNLRERQIIRLRFGIEDGKQRSLSEIGNMFGLS 539

Query: 276  KERVRQLESRALYRLKQCLGSQAVDGYADLLI 181
            KERVRQLESRA  +LKQ LGSQ +  Y  LL+
Sbjct: 540  KERVRQLESRAFLKLKQSLGSQGLGAYGPLLV 571


>ref|XP_009376812.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Pyrus x bretschneideri]
          Length = 573

 Score =  676 bits (1743), Expect = 0.0
 Identities = 349/573 (60%), Positives = 434/573 (75%), Gaps = 20/573 (3%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXAQQ-----------------F 1711
            ME GR+ L+S   FPS THL+H L                 +                 F
Sbjct: 1    MEVGRHFLSSSSAFPSTTHLRHPLPSSPSSSSSSTSVLMLHEQATAAVPSVPITFVARHF 60

Query: 1710 PTSVLLREQRDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQ 1531
            PTSVLL+EQRDE++PLLH  KE+KTSQAT DR Q + +    E+ +     QLV+D EHQ
Sbjct: 61   PTSVLLQEQRDEFKPLLHALKEEKTSQATLDRMQIETKASLNEDLDIDGFYQLVKDSEHQ 120

Query: 1530 FLHWKESLNLLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVL 1351
             L+    L++   +QT    S  LT++ +T  + + MD++P + VALA+KALSASKEAV 
Sbjct: 121  LLNRSGLLDVFSSLQTGVKLSAPLTVEPITTASSKHMDIKPSDAVALAKKALSASKEAVS 180

Query: 1350 LAENPKLNGAEFTDISLTSSLTFPLEEVKTVRSNRFLERRSK---KRRVSKPQVTVHETY 1180
             A+  K  G +F D        + +E+ KTVRS R LERR K   K+RVSK +V +HET 
Sbjct: 181  FADGSKSMGYDFDDSLSIGLDNWLVEDEKTVRSTRLLERRRKRLKKKRVSKSKVLIHETN 240

Query: 1179 ATRKAAVKKKLSEGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQ 1000
            +   + V++K++EGF+ NDPLRLFLWGPET+QLLTAEEE+ELIA++QDL +LE+ K++LQ
Sbjct: 241  SPPSSDVRRKINEGFNQNDPLRLFLWGPETKQLLTAEEEAELIARVQDLFKLEEVKNRLQ 300

Query: 999  SQFGREPTLIEWAEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLH 820
            SQFGREPTL+EWAEAVG+SC+ LKS+L SG SSREKL+ ANLR+VVH+AK+YQGRG+ L 
Sbjct: 301  SQFGREPTLVEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQGRGLGLQ 360

Query: 819  DLLQEGSMGLMKSVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSK 640
            DL+QEGSMGLMKSVEKFKPQAGCRFA+YAYWW+RQT+RKAIFQHSRTIRLPENVYTL+ K
Sbjct: 361  DLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENVYTLLGK 420

Query: 639  VLEAKRLCIQEGNHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEI 460
            VLEAK+ CIQEGNH+P KE+LA+RVGITVEKL++L++ TRMPLSMQQPVWADQ +TFQEI
Sbjct: 421  VLEAKKSCIQEGNHNPNKEELARRVGITVEKLQKLLYSTRMPLSMQQPVWADQDSTFQEI 480

Query: 459  TADTRVEIPDINVQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGL 280
            TADT  EIP ++V+KQLMRQH+R+L+ ILN +ER+IIRLRFGIEDG  +SLSEIGN+FGL
Sbjct: 481  TADTGTEIPHVSVEKQLMRQHVRHLLGILNLRERQIIRLRFGIEDGKQRSLSEIGNMFGL 540

Query: 279  SKERVRQLESRALYRLKQCLGSQAVDGYADLLI 181
            SKERVRQLESRA  +LKQ LGSQ +  Y  LL+
Sbjct: 541  SKERVRQLESRAFLKLKQSLGSQGLGAYGPLLV 573


>ref|XP_006381426.1| RNA POLYMERASE SIGMA-70 FACTOR family protein [Populus trichocarpa]
            gi|550336129|gb|ERP59223.1| RNA POLYMERASE SIGMA-70
            FACTOR family protein [Populus trichocarpa]
          Length = 535

 Score =  675 bits (1741), Expect = 0.0
 Identities = 350/560 (62%), Positives = 425/560 (75%), Gaps = 8/560 (1%)
 Frame = -3

Query: 1839 MEAGRNLLASPPPFPSRTHLKHTLXXXXXXXXXXXXXXXA--------QQFPTSVLLREQ 1684
            MEAGR LL+S P FP+RTHLK++L               +        Q FPTSVLL+EQ
Sbjct: 1    MEAGRTLLSSSPSFPTRTHLKNSLTSSVLILREQATPAVSSIPTTSTAQHFPTSVLLQEQ 60

Query: 1683 RDEYRPLLHFFKEDKTSQATSDRRQADNETFFLEENNSSDLDQLVQDLEHQFLHWKESLN 1504
            RDE+RPL + FKED+ SQAT DRR+ +  T   E  +S +LDQLV++ E+Q  HW    N
Sbjct: 61   RDEFRPLQNIFKEDRASQATLDRRKTEIGTSGHEGKDSDELDQLVENFEYQLHHWPAYWN 120

Query: 1503 LLPPVQTAEDPSLSLTMQLLTIDTEEPMDVEPFNVVALARKALSASKEAVLLAENPKLNG 1324
            L                      T++ +DVEP NV+ LA++ALSASK A  LA+N     
Sbjct: 121  L----------------------TDKLIDVEPTNVINLAKRALSASKHAAFLADN----N 154

Query: 1323 AEFTDISLTSSLTFPLEEVKTVRSNRFLERRSKKRRVSKPQVTVHETYATRKAAVKKKLS 1144
             +  +++ TSS +F LEEVK VRS R L R+S  RR  K +  + ETY ++ A V+K+LS
Sbjct: 155  TDLDNLASTSSSSFSLEEVKIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADVQKRLS 214

Query: 1143 EGFDPNDPLRLFLWGPETRQLLTAEEESELIAQIQDLIQLEKEKSKLQSQFGREPTLIEW 964
            +GFDPNDPLRLFLWGPET+QLLTA+EE ELIAQIQDL+ LE  K++L+SQFGREPTL+EW
Sbjct: 215  QGFDPNDPLRLFLWGPETKQLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEW 274

Query: 963  AEAVGLSCRDLKSELHSGNSSREKLVNANLRLVVHVAKRYQGRGISLHDLLQEGSMGLMK 784
            A+AVGLSC  LK +LHSGN SREKL+NANLR+VVH+AKRYQ RG+ L DLLQEG++GLMK
Sbjct: 275  AQAVGLSCHVLKLQLHSGNRSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMK 334

Query: 783  SVEKFKPQAGCRFASYAYWWVRQTIRKAIFQHSRTIRLPENVYTLVSKVLEAKRLCIQEG 604
            S+EKFKPQAGCRFA+YAYWW+RQTI KAIFQHSRTIRLPENVY L+ KV+EAKR  IQEG
Sbjct: 335  SIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEG 394

Query: 603  NHSPKKEDLAKRVGITVEKLERLMFMTRMPLSMQQPVWADQGTTFQEITADTRVEIPDIN 424
            NH P  E++A+RVGI ++KLE+L+  TR PLSMQQ VW+DQ TTFQEITADT +EIPD++
Sbjct: 395  NHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMS 454

Query: 423  VQKQLMRQHIRNLVSILNPKERRIIRLRFGIEDGNPKSLSEIGNIFGLSKERVRQLESRA 244
            V KQLMR+HIR L++IL+ KERRIIRLRFGIEDG  KSLSEIGN+FGLSKERVRQLESRA
Sbjct: 455  VAKQLMRKHIRGLLNILSLKERRIIRLRFGIEDGKQKSLSEIGNVFGLSKERVRQLESRA 514

Query: 243  LYRLKQCLGSQAVDGYADLL 184
            LY+LKQC+GS  +D YADLL
Sbjct: 515  LYKLKQCVGSHGLDAYADLL 534