BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006842
         (542 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   270   3e-70
gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   270   3e-70
ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated prot...   270   3e-70
ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citr...   264   2e-68
gb|KDO81670.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   250   3e-64
gb|KDO81668.1| hypothetical protein CISIN_1g013696mg [Citrus sin...   243   4e-62
ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfam...   225   1e-56
ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfam...   223   4e-56
ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily pr...   223   4e-56
ref|XP_010659703.1| PREDICTED: RNA polymerase II-associated prot...   216   7e-54
ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated prot...   216   7e-54
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              216   7e-54
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   216   7e-54
gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]    215   9e-54
ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated prot...   215   1e-53
ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated prot...   214   3e-53
ref|XP_012434281.1| PREDICTED: RNA polymerase II-associated prot...   213   3e-53
ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated prot...   213   3e-53
ref|XP_012088892.1| PREDICTED: RNA polymerase II-associated prot...   210   3e-52
ref|XP_012088891.1| PREDICTED: RNA polymerase II-associated prot...   210   3e-52

>gb|KDO81669.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 372

 Score =  270 bits (690), Expect = 3e-70
 Identities = 136/160 (85%), Positives = 146/160 (91%)
 Frame = +2

Query: 62  MAKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNV 241
           MAKHNRDQALDFQGFLNDLQ+W+LSL +++KK+KHKASSKDNLVSSS K  +KP PSGN 
Sbjct: 1   MAKHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN- 59

Query: 242 PLVESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSP 421
               SYS NYDPVSHISSSLM+EES PDATSEKELGNE FKQKKFKEAIDCYSRSI LSP
Sbjct: 60  ----SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP 115

Query: 422 TAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           TAVAYANRAMAY+KL+RFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 116 TAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155


>gb|KDO81667.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 438

 Score =  270 bits (690), Expect = 3e-70
 Identities = 136/160 (85%), Positives = 146/160 (91%)
 Frame = +2

Query: 62  MAKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNV 241
           MAKHNRDQALDFQGFLNDLQ+W+LSL +++KK+KHKASSKDNLVSSS K  +KP PSGN 
Sbjct: 1   MAKHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN- 59

Query: 242 PLVESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSP 421
               SYS NYDPVSHISSSLM+EES PDATSEKELGNE FKQKKFKEAIDCYSRSI LSP
Sbjct: 60  ----SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP 115

Query: 422 TAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           TAVAYANRAMAY+KL+RFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 116 TAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155


>ref|XP_006472205.1| PREDICTED: RNA polymerase II-associated protein 3-like [Citrus
           sinensis]
          Length = 438

 Score =  270 bits (690), Expect = 3e-70
 Identities = 136/160 (85%), Positives = 146/160 (91%)
 Frame = +2

Query: 62  MAKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNV 241
           MAKHNRDQALDFQGFLNDLQ+W+LSL +++KK+KHKASSKDNLVSSS K  +KP PSGN 
Sbjct: 1   MAKHNRDQALDFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN- 59

Query: 242 PLVESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSP 421
               SYS NYDPVSHISSSLM+EES PDATSEKELGNE FKQKKFKEAIDCYSRSI LSP
Sbjct: 60  ----SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP 115

Query: 422 TAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           TAVAYANRAMAY+KL+RFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 116 TAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 155


>ref|XP_006433540.1| hypothetical protein CICLE_v10003914mg [Citrus clementina]
            gi|557535662|gb|ESR46780.1| hypothetical protein
            CICLE_v10003914mg [Citrus clementina]
          Length = 977

 Score =  264 bits (675), Expect = 2e-68
 Identities = 134/160 (83%), Positives = 143/160 (89%)
 Frame = +2

Query: 62   MAKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNV 241
            M  HNRDQALDFQGFLNDLQ+W+LSL +++KK+KHKASSKDNLVSSS K  EKP PSGN 
Sbjct: 540  MPPHNRDQALDFQGFLNDLQDWDLSLHEKDKKMKHKASSKDNLVSSSLKSGEKPSPSGN- 598

Query: 242  PLVESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSP 421
                SYS NYDPVS ISSSLM+EES PDATSEKELGNE FKQKKFKEAIDCYSRSI LSP
Sbjct: 599  ----SYSRNYDPVSRISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP 654

Query: 422  TAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
            TAVAYANRAMAY+KL+RFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 655  TAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 694


>gb|KDO81670.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 431

 Score =  250 bits (638), Expect = 3e-64
 Identities = 126/150 (84%), Positives = 136/150 (90%)
 Frame = +2

Query: 92  DFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPLVESYSMNY 271
           DFQGFLNDLQ+W+LSL +++KK+KHKASSKDNLVSSS K  +KP PSGN     SYS NY
Sbjct: 4   DFQGFLNDLQDWDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN-----SYSRNY 58

Query: 272 DPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSPTAVAYANRAM 451
           DPVSHISSSLM+EES PDATSEKELGNE FKQKKFKEAIDCYSRSI LSPTAVAYANRAM
Sbjct: 59  DPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSPTAVAYANRAM 118

Query: 452 AYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           AY+KL+RFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 119 AYLKLRRFQEAEDDCTEALNLDDRYIKAYS 148


>gb|KDO81668.1| hypothetical protein CISIN_1g013696mg [Citrus sinensis]
          Length = 428

 Score =  243 bits (620), Expect = 4e-62
 Identities = 127/160 (79%), Positives = 136/160 (85%)
 Frame = +2

Query: 62  MAKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNV 241
           MAKHNRDQALD          W+LSL +++KK+KHKASSKDNLVSSS K  +KP PSGN 
Sbjct: 1   MAKHNRDQALD----------WDLSLNEKDKKMKHKASSKDNLVSSSLKSAKKPSPSGN- 49

Query: 242 PLVESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSP 421
               SYS NYDPVSHISSSLM+EES PDATSEKELGNE FKQKKFKEAIDCYSRSI LSP
Sbjct: 50  ----SYSRNYDPVSHISSSLMNEESTPDATSEKELGNECFKQKKFKEAIDCYSRSIALSP 105

Query: 422 TAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           TAVAYANRAMAY+KL+RFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 106 TAVAYANRAMAYLKLRRFQEAEDDCTEALNLDDRYIKAYS 145


>ref|XP_007031159.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 2 [Theobroma cacao] gi|508719764|gb|EOY11661.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 2 [Theobroma cacao]
          Length = 422

 Score =  225 bits (573), Expect = 1e-56
 Identities = 114/168 (67%), Positives = 136/168 (80%), Gaps = 9/168 (5%)
 Frame = +2

Query: 65  AKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVP 244
           +KH+RDQALDFQGFLN+LQ+WELSLK+++K +K +AS K+ L     K +EK RP+G   
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQL-----KTNEKGRPTGKSS 57

Query: 245 LVES---------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCY 397
           L++S         Y  NYD  + +SSS + EE+ PDA SEKELGNEYFKQKKFKEAIDCY
Sbjct: 58  LIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCY 117

Query: 398 SRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           SRSIGLSPTAVA+ANRAMAY+K+K+FQEAEDDCTEALNLDDRYIKAYS
Sbjct: 118 SRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYS 165


>ref|XP_007031161.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
           isoform 4 [Theobroma cacao] gi|508719766|gb|EOY11663.1|
           Tetratricopeptide repeat (TPR)-like superfamily protein,
           putative isoform 4 [Theobroma cacao]
          Length = 421

 Score =  223 bits (568), Expect = 4e-56
 Identities = 113/168 (67%), Positives = 135/168 (80%), Gaps = 9/168 (5%)
 Frame = +2

Query: 65  AKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVP 244
           +KH+RDQALDFQGFLN+LQ+WELSLK+++K +K +AS K+ L +      EK RP+G   
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTN------EKGRPTGKSS 56

Query: 245 LVES---------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCY 397
           L++S         Y  NYD  + +SSS + EE+ PDA SEKELGNEYFKQKKFKEAIDCY
Sbjct: 57  LIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCY 116

Query: 398 SRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           SRSIGLSPTAVA+ANRAMAY+K+K+FQEAEDDCTEALNLDDRYIKAYS
Sbjct: 117 SRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYS 164


>ref|XP_007031158.1| Tetratricopeptide repeat-like superfamily protein, putative isoform
           1 [Theobroma cacao] gi|508719763|gb|EOY11660.1|
           Tetratricopeptide repeat-like superfamily protein,
           putative isoform 1 [Theobroma cacao]
          Length = 468

 Score =  223 bits (568), Expect = 4e-56
 Identities = 113/168 (67%), Positives = 135/168 (80%), Gaps = 9/168 (5%)
 Frame = +2

Query: 65  AKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVP 244
           +KH+RDQALDFQGFLN+LQ+WELSLK+++K +K +AS K+ L +      EK RP+G   
Sbjct: 3   SKHSRDQALDFQGFLNNLQDWELSLKEKDKIMKSQASDKEQLTN------EKGRPTGKSS 56

Query: 245 LVES---------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCY 397
           L++S         Y  NYD  + +SSS + EE+ PDA SEKELGNEYFKQKKFKEAIDCY
Sbjct: 57  LIDSSTTSSRQYDYLQNYDKFNSLSSSFVTEENMPDAASEKELGNEYFKQKKFKEAIDCY 116

Query: 398 SRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           SRSIGLSPTAVA+ANRAMAY+K+K+FQEAEDDCTEALNLDDRYIKAYS
Sbjct: 117 SRSIGLSPTAVAHANRAMAYLKIKKFQEAEDDCTEALNLDDRYIKAYS 164


>ref|XP_010659703.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Vitis
           vinifera]
          Length = 425

 Score =  216 bits (549), Expect = 7e-54
 Identities = 115/170 (67%), Positives = 128/170 (75%), Gaps = 11/170 (6%)
 Frame = +2

Query: 65  AKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKD-----NLVSSSHKLDEKPRP 229
           +KH RDQALDFQGFL DLQ+WELSLK+++KK+K +A  KD       V  S KL   P  
Sbjct: 7   SKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLSSSPGV 66

Query: 230 SGNVPLVES------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAID 391
           S  +    S      YS N+D +S ISSS M EES PDA SEKELGNEYFKQ+KFKEAID
Sbjct: 67  SLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAID 126

Query: 392 CYSRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           CYSRSI L PTAVAYANRAMAYIK+KRF+EAEDDC EALNLDDRYIKAYS
Sbjct: 127 CYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYS 176


>ref|XP_009373287.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Pyrus
           x bretschneideri]
          Length = 412

 Score =  216 bits (549), Expect = 7e-54
 Identities = 110/158 (69%), Positives = 124/158 (78%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPL 247
           KH RDQALDFQGFL+DLQ+WELSLKD++KK++ + S ++ L         K R SG    
Sbjct: 7   KHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEKL---------KTRDSGTSSE 57

Query: 248 VESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSPTA 427
              YS N+D +  ISSSL  E+S PDA SEKELGNEYFKQKKFKEAIDCYSRSI LSP+A
Sbjct: 58  NYDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSA 117

Query: 428 VAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           VAYANR MA IK+KRFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 118 VAYANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYS 155


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  216 bits (549), Expect = 7e-54
 Identities = 115/170 (67%), Positives = 128/170 (75%), Gaps = 11/170 (6%)
 Frame = +2

Query: 65   AKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKD-----NLVSSSHKLDEKPRP 229
            +KH RDQALDFQGFL DLQ+WELSLK+++KK+K +A  KD       V  S KL   P  
Sbjct: 630  SKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLSSSPGV 689

Query: 230  SGNVPLVES------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAID 391
            S  +    S      YS N+D +S ISSS M EES PDA SEKELGNEYFKQ+KFKEAID
Sbjct: 690  SLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAID 749

Query: 392  CYSRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
            CYSRSI L PTAVAYANRAMAYIK+KRF+EAEDDC EALNLDDRYIKAYS
Sbjct: 750  CYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYS 799


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Vitis
           vinifera]
          Length = 474

 Score =  216 bits (549), Expect = 7e-54
 Identities = 115/170 (67%), Positives = 128/170 (75%), Gaps = 11/170 (6%)
 Frame = +2

Query: 65  AKHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKD-----NLVSSSHKLDEKPRP 229
           +KH RDQALDFQGFL DLQ+WELSLK+++KK+K +A  KD       V  S KL   P  
Sbjct: 7   SKHARDQALDFQGFLTDLQDWELSLKEKDKKMKAQAEEKDVPTARGNVKHSSKLSSSPGV 66

Query: 230 SGNVPLVES------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAID 391
           S  +    S      YS N+D +S ISSS M EES PDA SEKELGNEYFKQ+KFKEAID
Sbjct: 67  SLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKFKEAID 126

Query: 392 CYSRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           CYSRSI L PTAVAYANRAMAYIK+KRF+EAEDDC EALNLDDRYIKAYS
Sbjct: 127 CYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYS 176


>gb|KHG26705.1| RNA polymerase II-associated 3 [Gossypium arboreum]
          Length = 472

 Score =  215 bits (548), Expect = 9e-54
 Identities = 113/171 (66%), Positives = 132/171 (77%), Gaps = 12/171 (7%)
 Frame = +2

Query: 65  AKHNRDQALDFQGFLNDLQNWELSLKDR--EKKVKHKASSKDNLVSSSHKLDEKPRPSGN 238
           +KH+RDQA+DFQGFLNDLQ+WELSLKD+   KK+  +AS K+ L      + EK RP+G 
Sbjct: 3   SKHSRDQAMDFQGFLNDLQDWELSLKDKGKNKKMTSQASGKEQL-----NITEKGRPTGK 57

Query: 239 VPLVES----------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAI 388
             L  S          Y  NYD  S++S+S + EE+ PDA SEKELGNEYFKQKKFKEAI
Sbjct: 58  RSLNSSSSTTSSEQYDYLKNYDKWSNLSTSFVTEENMPDAASEKELGNEYFKQKKFKEAI 117

Query: 389 DCYSRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           DCYSRSI LSPTAVAYANRAMAY+K+++FQEAEDDCTEALNLDDRYIKAYS
Sbjct: 118 DCYSRSIALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYS 168


>ref|XP_008388471.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Malus
           domestica]
          Length = 412

 Score =  215 bits (547), Expect = 1e-53
 Identities = 109/158 (68%), Positives = 124/158 (78%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPL 247
           KH RDQALDFQGFL+DLQ+WELSLKD++KK++ + S ++ L         K R SG    
Sbjct: 7   KHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEXL---------KTRDSGTSSG 57

Query: 248 VESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSPTA 427
              YS N+D +  ISSSL  E+S PDA SEKELGNEYFKQKKFKEAIDCYSRSI LSP+A
Sbjct: 58  NYDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSA 117

Query: 428 VAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           VAYANR MAYIK++RFQEAEDDCT ALNLDDRYIKAYS
Sbjct: 118 VAYANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYS 155


>ref|XP_009373288.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Pyrus
           x bretschneideri]
          Length = 411

 Score =  214 bits (544), Expect = 3e-53
 Identities = 109/158 (68%), Positives = 123/158 (77%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPL 247
           KH RDQALDFQGFL+DLQ+WELSLKD++KK++ + S ++ L           R SG    
Sbjct: 7   KHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEKLT----------RDSGTSSE 56

Query: 248 VESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSPTA 427
              YS N+D +  ISSSL  E+S PDA SEKELGNEYFKQKKFKEAIDCYSRSI LSP+A
Sbjct: 57  NYDYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSA 116

Query: 428 VAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           VAYANR MA IK+KRFQEAEDDCTEALNLDDRYIKAYS
Sbjct: 117 VAYANRGMACIKIKRFQEAEDDCTEALNLDDRYIKAYS 154


>ref|XP_012434281.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X1
           [Gossypium raimondii] gi|763778334|gb|KJB45457.1|
           hypothetical protein B456_007G306700 [Gossypium
           raimondii]
          Length = 472

 Score =  213 bits (543), Expect = 3e-53
 Identities = 112/170 (65%), Positives = 131/170 (77%), Gaps = 12/170 (7%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDR--EKKVKHKASSKDNLVSSSHKLDEKPRPSGNV 241
           KH+RDQA+DFQGFLNDLQ+WELSLKD+   KK+  +AS K+ L      + EK RP+G  
Sbjct: 4   KHSRDQAMDFQGFLNDLQDWELSLKDKGKNKKMTSQASGKEQL-----NITEKGRPTGKR 58

Query: 242 PLVES----------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAID 391
            L  S          Y  NYD  S++S+S + EE+ PDA SEKELGNEYFKQKKFKEAID
Sbjct: 59  SLNNSSSTTSSEQYDYLKNYDKRSNLSTSFVTEENMPDAASEKELGNEYFKQKKFKEAID 118

Query: 392 CYSRSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           CYSRSI LSPTAVAYANRAMAY+K+++FQEAEDDC+EALNLDDRYIKAYS
Sbjct: 119 CYSRSIALSPTAVAYANRAMAYLKIRKFQEAEDDCSEALNLDDRYIKAYS 168


>ref|XP_008388472.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2 [Malus
           domestica]
          Length = 411

 Score =  213 bits (543), Expect = 3e-53
 Identities = 109/158 (68%), Positives = 124/158 (78%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPL 247
           KH RDQALDFQGFL+DLQ+WELSLKD++KK++ + S ++ L   S         SGN   
Sbjct: 7   KHGRDQALDFQGFLSDLQDWELSLKDKDKKMRPQVSQQEXLTRDSGT------SSGNY-- 58

Query: 248 VESYSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYSRSIGLSPTA 427
              YS N+D +  ISSSL  E+S PDA SEKELGNEYFKQKKFKEAIDCYSRSI LSP+A
Sbjct: 59  --DYSRNFDAIKRISSSLRSEDSLPDAASEKELGNEYFKQKKFKEAIDCYSRSIALSPSA 116

Query: 428 VAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           VAYANR MAYIK++RFQEAEDDCT ALNLDDRYIKAYS
Sbjct: 117 VAYANRGMAYIKIRRFQEAEDDCTXALNLDDRYIKAYS 154


>ref|XP_012088892.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X3
           [Jatropha curcas]
          Length = 468

 Score =  210 bits (535), Expect = 3e-52
 Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 9/167 (5%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPL 247
           KH RDQALDFQGFLNDLQ+WELSLKD++KK+K  +S K++         E  R +G    
Sbjct: 7   KHGRDQALDFQGFLNDLQDWELSLKDKDKKMKPHSSDKNS---------ESRRSTGKTSA 57

Query: 248 VES---------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYS 400
           ++S         Y  N+D +  I SS + EES  DATSEKELGNEYFKQKK+KEAI+CYS
Sbjct: 58  IDSSRGSSGQHDYLRNFDAIERIPSSFIAEESAVDATSEKELGNEYFKQKKYKEAIECYS 117

Query: 401 RSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           RSI LSPTAVAYANRAMAY+K+++FQEAEDDCTEALNLDDRYIKAYS
Sbjct: 118 RSIALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYS 164


>ref|XP_012088891.1| PREDICTED: RNA polymerase II-associated protein 3 isoform X2
           [Jatropha curcas]
          Length = 475

 Score =  210 bits (535), Expect = 3e-52
 Identities = 108/167 (64%), Positives = 127/167 (76%), Gaps = 9/167 (5%)
 Frame = +2

Query: 68  KHNRDQALDFQGFLNDLQNWELSLKDREKKVKHKASSKDNLVSSSHKLDEKPRPSGNVPL 247
           KH RDQALDFQGFLNDLQ+WELSLKD++KK+K  +S K++         E  R +G    
Sbjct: 7   KHGRDQALDFQGFLNDLQDWELSLKDKDKKMKPHSSDKNS---------ESRRSTGKTSA 57

Query: 248 VES---------YSMNYDPVSHISSSLMHEESFPDATSEKELGNEYFKQKKFKEAIDCYS 400
           ++S         Y  N+D +  I SS + EES  DATSEKELGNEYFKQKK+KEAI+CYS
Sbjct: 58  IDSSRGSSGQHDYLRNFDAIERIPSSFIAEESAVDATSEKELGNEYFKQKKYKEAIECYS 117

Query: 401 RSIGLSPTAVAYANRAMAYIKLKRFQEAEDDCTEALNLDDRYIKAYS 541
           RSI LSPTAVAYANRAMAY+K+++FQEAEDDCTEALNLDDRYIKAYS
Sbjct: 118 RSIALSPTAVAYANRAMAYLKIRKFQEAEDDCTEALNLDDRYIKAYS 164