BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006712
         (3230 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006467996.1| PREDICTED: uncharacterized protein LOC102631...  1465   0.0  
ref|XP_006449074.1| hypothetical protein CICLE_v10014158mg [Citr...  1463   0.0  
ref|XP_006467998.1| PREDICTED: uncharacterized protein LOC102631...  1394   0.0  
gb|KDO75520.1| hypothetical protein CISIN_1g003277mg [Citrus sin...  1189   0.0  
gb|KDO75521.1| hypothetical protein CISIN_1g003277mg [Citrus sin...  1114   0.0  
ref|XP_012091393.1| PREDICTED: polyadenylation and cleavage fact...  1079   0.0  
ref|XP_007026008.1| PCF11P-similar protein 4, putative isoform 1...  1065   0.0  
ref|XP_011037706.1| PREDICTED: polyadenylation and cleavage fact...  1050   0.0  
ref|XP_011037705.1| PREDICTED: polyadenylation and cleavage fact...  1043   0.0  
gb|KDO75524.1| hypothetical protein CISIN_1g003277mg [Citrus sin...  1043   0.0  
ref|XP_011037702.1| PREDICTED: polyadenylation and cleavage fact...  1038   0.0  
ref|XP_002518518.1| conserved hypothetical protein [Ricinus comm...  1028   0.0  
gb|KHG24664.1| Pre-mRNA cleavage complex 2 Pcf11 [Gossypium arbo...  1020   0.0  
ref|XP_002316604.2| pre-mRNA cleavage complex-related family pro...  1019   0.0  
ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage fact...  1016   0.0  
ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage fact...  1012   0.0  
ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage fact...   995   0.0  
gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium r...   993   0.0  
ref|XP_007213705.1| hypothetical protein PRUPE_ppa000684mg [Prun...   981   0.0  
gb|KJB67159.1| hypothetical protein B456_010G178200 [Gossypium r...   958   0.0  

>ref|XP_006467996.1| PREDICTED: uncharacterized protein LOC102631201 isoform X1 [Citrus
            sinensis] gi|568827290|ref|XP_006467997.1| PREDICTED:
            uncharacterized protein LOC102631201 isoform X2 [Citrus
            sinensis]
          Length = 975

 Score = 1465 bits (3793), Expect = 0.0
 Identities = 765/1020 (75%), Positives = 827/1020 (81%), Gaps = 11/1020 (1%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPS--LAFSNNNGKAMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            MESGKILQNPRPSPS  LAF+NNN KAMPNELAQKPSTPIIDKF             VGD
Sbjct: 1    MESGKILQNPRPSPSPSLAFTNNN-KAMPNELAQKPSTPIIDKFRALLKLREAEAR-VGD 58

Query: 2967 GEGT-LSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPV 2791
            G GT LS  EIVQLYE VLAELT NSKPIITDLTIIAGEQR HGDGIAEAI  RILE PV
Sbjct: 59   GAGTTLSTNEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPV 118

Query: 2790 DQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFP 2611
            + KLPSLYLLDSIVKNI KEYVRYFSS +PEVFCEAYRQV+P+++S+M+HLFGTWSTVFP
Sbjct: 119  NHKLPSLYLLDSIVKNINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFP 178

Query: 2610 QSVLQKIEAELHF-SQVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQ 2434
            Q+VL+KIEAEL F SQVNKQ SNVNS RAS SPRPTHGIHVNPKYIRQ EHSN DS    
Sbjct: 179  QAVLRKIEAELQFSSQVNKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS---- 234

Query: 2433 VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPT 2254
                                             VGGQR NPAG V RA+ +LGANKLHP+
Sbjct: 235  ---------------------------------VGGQRSNPAGSVGRATFALGANKLHPS 261

Query: 2253 STSRLGRPFSPLGIGSEVDEFAVENSPRRLEGASPARPVFDFGLSRAISRNEDMSEWRNP 2074
            STSRLGR  SPL IGSE DEFAVENSPRRLEG SP+ PVFD+G+ RAI RNE++SEWRNP
Sbjct: 262  STSRLGRSLSPLAIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNP 321

Query: 2073 NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTSDNKPSQVGCLGRNGMGNKVASRSWQ 1894
            NR E+TS +YNLSNG EHQG RALIDAYGSDRR S+NKP QVG +G NGMGNKVASRSWQ
Sbjct: 322  NRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQ 381

Query: 1893 NTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXX 1714
            NTEEEE+DWEDMSPTL+DRG+KNDF PSSVP +GS  AR D SKL ASS ESD+R+NH  
Sbjct: 382  NTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSS 441

Query: 1713 XXXXXXLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQ------NLPHHFLRSS 1555
                  LDD S+T EDSV  +GSGRGTGK+SGFQSEPN NLG +      NLPHHF RSS
Sbjct: 442  QAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSS 501

Query: 1554 HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPD 1375
            H  NG GRGRDS IPFPGSGVPS+G VDKAAP+IDKFV ADAQ VRPPAVVSR+G SGPD
Sbjct: 502  HPPNGRGRGRDSHIPFPGSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPD 560

Query: 1374 XXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPS 1195
                              AP+NLHKPHLPP QP Y QQK+TRTQFDSIN AG +LNQGPS
Sbjct: 561  ----LLSTGAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGRILNQGPS 616

Query: 1194 KSLYNPESKELILMKPLQPRDQHATPNQQNQGQAQFLSQEARNNFLPSIAASVPPHLLAP 1015
            KSLYN ESKEL LMKP Q  DQHATPNQQNQG+AQFLSQEA NNFLPSIAAS+PPH LAP
Sbjct: 617  KSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLPSIAASMPPHPLAP 675

Query: 1014 PWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQ 835
            P +HG TQ+GHNAV GMV SNPVPA Q PL  QSI NSS                PASSQ
Sbjct: 676  PLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPAPPLPPGPPPASSQ 735

Query: 834  MIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHE 655
            MIPG+QS+GLVVP+QQPGHAFSGLI+SLMAQGLISLT +TPVQDSVGLEFN DLHK+RHE
Sbjct: 736  MIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVGLEFNADLHKLRHE 795

Query: 654  CAITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWL 475
             AI+ LYANLPRQCTTCGLRFKCQEEHSSHMDWHVT+NRMSKNRKQKPSRKWFVSASMWL
Sbjct: 796  SAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSASMWL 855

Query: 474  SGTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMY 295
            SGTEALGTDA+PGFLPAEPI+EKKDDEEMAVPADEDQN CALCGEPFDDFYSDETEEWMY
Sbjct: 856  SGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPFDDFYSDETEEWMY 915

Query: 294  KGAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            KGA+YMNA NGST GM+RSQLGPIVHAKCRSESTVIPS+DF+ +EGGSSE+G++RK+LRS
Sbjct: 916  KGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVIPSDDFKRDEGGSSEEGNQRKKLRS 975


>ref|XP_006449074.1| hypothetical protein CICLE_v10014158mg [Citrus clementina]
            gi|557551685|gb|ESR62314.1| hypothetical protein
            CICLE_v10014158mg [Citrus clementina]
          Length = 975

 Score = 1463 bits (3788), Expect = 0.0
 Identities = 768/1020 (75%), Positives = 827/1020 (81%), Gaps = 11/1020 (1%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPS--LAFSNNNGKAMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            MESGKILQNPRPSPS  LAF+NNN KAMPNELAQKPSTPIIDKF             VGD
Sbjct: 1    MESGKILQNPRPSPSPSLAFTNNN-KAMPNELAQKPSTPIIDKFRALLKLREEEAR-VGD 58

Query: 2967 GEGT-LSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPV 2791
            G GT LS +EIVQLYE VLAELT NSKPIITDLTIIAGEQR HGDGIAEAI  RILE PV
Sbjct: 59   GAGTTLSTDEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPV 118

Query: 2790 DQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFP 2611
            + KLPSLYLLDSIVKNI KEYVRYFSS +PEVFCEAYRQV+P+++S+M+HLFGTWSTVFP
Sbjct: 119  NHKLPSLYLLDSIVKNINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFP 178

Query: 2610 QSVLQKIEAELHF-SQVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQ 2434
            Q+VL KIEAEL F SQVNKQ SNVNS RAS SPRPTHGIHVNPKYIRQ EHSN DS    
Sbjct: 179  QAVLHKIEAELQFSSQVNKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS---- 234

Query: 2433 VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPT 2254
                                             VGGQR NPAG V RA+ +LGANKLHP+
Sbjct: 235  ---------------------------------VGGQRSNPAGSVGRATFALGANKLHPS 261

Query: 2253 STSRLGRPFSPLGIGSEVDEFAVENSPRRLEGASPARPVFDFGLSRAISRNEDMSEWRNP 2074
            STSRLGR  SPLGIGSE DEFAVENSPRRLEG SP+ PVFD+G+ RAI RNE++SEWRNP
Sbjct: 262  STSRLGRSLSPLGIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNP 321

Query: 2073 NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTSDNKPSQVGCLGRNGMGNKVASRSWQ 1894
            NR E+TS +YNLSNG EHQG RALIDAYGSDRR S+NKPSQVG +G NGMGNKVASRSWQ
Sbjct: 322  NRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPSQVGHMGINGMGNKVASRSWQ 381

Query: 1893 NTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXX 1714
            NTEEEE+DWEDMSPTL+DRG+K DF PSSVP +GS  AR D SKL ASS ESDIR+NH  
Sbjct: 382  NTEEEEFDWEDMSPTLLDRGRKFDFLPSSVPLYGSTGARPDFSKLNASSLESDIRTNHSS 441

Query: 1713 XXXXXXLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQ------NLPHHFLRSS 1555
                  LDD S+T EDSV  +GSGRGTGK+SGFQSEPN NLG +      NLPH F RSS
Sbjct: 442  QAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHPFSRSS 501

Query: 1554 HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPD 1375
            H  NG GRGRDS IPFPGSGVPS+G VDKAAP+IDKFV ADA  VRPPAVVSR+G SGPD
Sbjct: 502  HPPNGRGRGRDSHIPFPGSGVPSLG-VDKAAPYIDKFVGADALFVRPPAVVSRIGSSGPD 560

Query: 1374 XXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPS 1195
                              AP+NLHKPHLPP QP Y QQK+TRTQFDSIN AG++LNQG S
Sbjct: 561  ----LLSTGAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGSILNQGLS 616

Query: 1194 KSLYNPESKELILMKPLQPRDQHATPNQQNQGQAQFLSQEARNNFLPSIAASVPPHLLAP 1015
            KSLYN ESKEL LMKP Q  DQHATPNQQNQG+AQFLSQEA N FLPSIAAS+PPHLLAP
Sbjct: 617  KSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNKFLPSIAASMPPHLLAP 675

Query: 1014 PWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQ 835
            P +HG TQ+GHNAV GMVPSNPVPA Q PL  QSI NSS                PASSQ
Sbjct: 676  PLSHGYTQRGHNAVMGMVPSNPVPAGQQPLHVQSIQNSSLHLQGRPSPPLPPGPPPASSQ 735

Query: 834  MIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHE 655
            MIPG+QS+GLVVP+QQPGHAFSGLI+SLMAQGLISLT +TPVQDSVGLEFN DLHK+RHE
Sbjct: 736  MIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVGLEFNADLHKLRHE 795

Query: 654  CAITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWL 475
             AI+ LYANLPRQCTTCGLRFKCQEEHSSHMDWHVT+NRMSKNRKQKPSRKWFVSASMWL
Sbjct: 796  SAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSASMWL 855

Query: 474  SGTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMY 295
            SGTEALGTDA+PGFLPAEPILEKKDDEEMAVPADEDQN CALCGEPFDDFYSDETEEWMY
Sbjct: 856  SGTEALGTDAIPGFLPAEPILEKKDDEEMAVPADEDQNVCALCGEPFDDFYSDETEEWMY 915

Query: 294  KGAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            KGAVYMNA NGST GMDRSQLGPIVHAKCRSESTVIPS+DF+ +EGGSSE+G++RK+LRS
Sbjct: 916  KGAVYMNAPNGSTEGMDRSQLGPIVHAKCRSESTVIPSDDFKRDEGGSSEEGNQRKKLRS 975


>ref|XP_006467998.1| PREDICTED: uncharacterized protein LOC102631201 isoform X3 [Citrus
            sinensis]
          Length = 941

 Score = 1394 bits (3607), Expect = 0.0
 Identities = 737/1020 (72%), Positives = 797/1020 (78%), Gaps = 11/1020 (1%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPS--LAFSNNNGKAMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            MESGKILQNPRPSPS  LAF+NNN KAMPNELAQKPSTPIIDKF             VGD
Sbjct: 1    MESGKILQNPRPSPSPSLAFTNNN-KAMPNELAQKPSTPIIDKFRALLKLREAEAR-VGD 58

Query: 2967 GEGT-LSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPV 2791
            G GT LS  EIVQLYE VLAELT NSKPIITDLTIIAGEQR HGDGIAEAI  RIL    
Sbjct: 59   GAGTTLSTNEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRIL---- 114

Query: 2790 DQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFP 2611
                                          EVFCEAYRQV+P+++S+M+HLFGTWSTVFP
Sbjct: 115  ------------------------------EVFCEAYRQVHPDLYSAMQHLFGTWSTVFP 144

Query: 2610 QSVLQKIEAELHF-SQVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQ 2434
            Q+VL+KIEAEL F SQVNKQ SNVNS RAS SPRPTHGIHVNPKYIRQ EHSN DS    
Sbjct: 145  QAVLRKIEAELQFSSQVNKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS---- 200

Query: 2433 VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPT 2254
                                             VGGQR NPAG V RA+ +LGANKLHP+
Sbjct: 201  ---------------------------------VGGQRSNPAGSVGRATFALGANKLHPS 227

Query: 2253 STSRLGRPFSPLGIGSEVDEFAVENSPRRLEGASPARPVFDFGLSRAISRNEDMSEWRNP 2074
            STSRLGR  SPL IGSE DEFAVENSPRRLEG SP+ PVFD+G+ RAI RNE++SEWRNP
Sbjct: 228  STSRLGRSLSPLAIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNP 287

Query: 2073 NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTSDNKPSQVGCLGRNGMGNKVASRSWQ 1894
            NR E+TS +YNLSNG EHQG RALIDAYGSDRR S+NKP QVG +G NGMGNKVASRSWQ
Sbjct: 288  NRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQ 347

Query: 1893 NTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXX 1714
            NTEEEE+DWEDMSPTL+DRG+KNDF PSSVP +GS  AR D SKL ASS ESD+R+NH  
Sbjct: 348  NTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSS 407

Query: 1713 XXXXXXLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQ------NLPHHFLRSS 1555
                  LDD S+T EDSV  +GSGRGTGK+SGFQSEPN NLG +      NLPHHF RSS
Sbjct: 408  QAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSS 467

Query: 1554 HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPD 1375
            H  NG GRGRDS IPFPGSGVPS+G VDKAAP+IDKFV ADAQ VRPPAVVSR+G SGPD
Sbjct: 468  HPPNGRGRGRDSHIPFPGSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPD 526

Query: 1374 XXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPS 1195
                              AP+NLHKPHLPP QP Y QQK+TRTQFDSIN AG +LNQGPS
Sbjct: 527  ----LLSTGAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGRILNQGPS 582

Query: 1194 KSLYNPESKELILMKPLQPRDQHATPNQQNQGQAQFLSQEARNNFLPSIAASVPPHLLAP 1015
            KSLYN ESKEL LMKP Q  DQHATPNQQNQG+AQFLSQEA NNFLPSIAAS+PPH LAP
Sbjct: 583  KSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLPSIAASMPPHPLAP 641

Query: 1014 PWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQ 835
            P +HG TQ+GHNAV GMV SNPVPA Q PL  QSI NSS                PASSQ
Sbjct: 642  PLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPAPPLPPGPPPASSQ 701

Query: 834  MIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHE 655
            MIPG+QS+GLVVP+QQPGHAFSGLI+SLMAQGLISLT +TPVQDSVGLEFN DLHK+RHE
Sbjct: 702  MIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVGLEFNADLHKLRHE 761

Query: 654  CAITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWL 475
             AI+ LYANLPRQCTTCGLRFKCQEEHSSHMDWHVT+NRMSKNRKQKPSRKWFVSASMWL
Sbjct: 762  SAISSLYANLPRQCTTCGLRFKCQEEHSSHMDWHVTKNRMSKNRKQKPSRKWFVSASMWL 821

Query: 474  SGTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMY 295
            SGTEALGTDA+PGFLPAEPI+EKKDDEEMAVPADEDQN CALCGEPFDDFYSDETEEWMY
Sbjct: 822  SGTEALGTDAIPGFLPAEPIVEKKDDEEMAVPADEDQNVCALCGEPFDDFYSDETEEWMY 881

Query: 294  KGAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            KGA+YMNA NGST GM+RSQLGPIVHAKCRSESTVIPS+DF+ +EGGSSE+G++RK+LRS
Sbjct: 882  KGAIYMNAPNGSTEGMERSQLGPIVHAKCRSESTVIPSDDFKRDEGGSSEEGNQRKKLRS 941


>gb|KDO75520.1| hypothetical protein CISIN_1g003277mg [Citrus sinensis]
          Length = 834

 Score = 1189 bits (3075), Expect = 0.0
 Identities = 629/838 (75%), Positives = 683/838 (81%), Gaps = 11/838 (1%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPS--LAFSNNNGKAMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            MESGKILQNPRPSPS  LAF+NNN KAMPNELAQKPSTPIIDKF             VGD
Sbjct: 1    MESGKILQNPRPSPSPSLAFTNNN-KAMPNELAQKPSTPIIDKFRALLKLREAEAR-VGD 58

Query: 2967 GEGT-LSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPV 2791
            G GT LS  EIVQLYE VLAELT NSKPIITDLTIIAGEQR HGDGIAEAI  RILE PV
Sbjct: 59   GAGTTLSTNEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPV 118

Query: 2790 DQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFP 2611
            + KLPSLYLLDSIVKNI KEYVRYFSS +PEVFCEAYRQV+P+++S+M+HLFGTWSTVFP
Sbjct: 119  NHKLPSLYLLDSIVKNINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFP 178

Query: 2610 QSVLQKIEAELHFS-QVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQ 2434
            Q+VL+KIEAEL FS QVNKQ SNVNS RAS SPRPTHGIHVNPKYIRQ EHSN DSNIQQ
Sbjct: 179  QAVLRKIEAELQFSSQVNKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDSNIQQ 238

Query: 2433 VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPT 2254
            V+GTSSN+K YGQ P+IGYD FD NH E++SSQVGGQR NPAG V RA+ +LGANKLHP+
Sbjct: 239  VKGTSSNLKEYGQNPAIGYDEFDTNHLELTSSQVGGQRSNPAGSVGRATFALGANKLHPS 298

Query: 2253 STSRLGRPFSPLGIGSEVDEFAVENSPRRLEGASPARPVFDFGLSRAISRNEDMSEWRNP 2074
            STSRLGR  SPL IGSE DEFAVENSPRRLEG SP+ PVFD+G+ RAI RNE++SEWRNP
Sbjct: 299  STSRLGRSLSPLAIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNP 358

Query: 2073 NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTSDNKPSQVGCLGRNGMGNKVASRSWQ 1894
            NR E+TS +YNLSNG EHQG RALIDAYGSDRR S+NKP QVG +G NGMGNKVASRSWQ
Sbjct: 359  NRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQ 418

Query: 1893 NTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXX 1714
            NTEEEE+DWEDMSPTL+DRG+KNDF PSSVP +GS  AR D SKL ASS ESD+R+NH  
Sbjct: 419  NTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSS 478

Query: 1713 XXXXXXLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQ------NLPHHFLRSS 1555
                  LDD S+T EDSV  +GSGRGTGK+SGFQSEPN NLG +      NLPHHF RSS
Sbjct: 479  QAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSS 538

Query: 1554 HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPD 1375
            H  NG GRGRDS IPFPGSGVPS+G VDKAAP+IDKFV ADAQ VRPPAVVSR+G SGPD
Sbjct: 539  HPPNGRGRGRDSHIPFPGSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPD 597

Query: 1374 XXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPS 1195
                              AP+NLHKPHLPP QP Y QQK+TRTQFDSIN AG +LNQGPS
Sbjct: 598  ----LLSTGAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGRILNQGPS 653

Query: 1194 KSLYNPESKELILMKPLQPRDQHATPNQQNQGQAQFLSQEARNNFLPSIAASVPPHLLAP 1015
            KSLYN ESKEL LMKP Q  DQHATPNQQNQG+AQFLSQEA NNFLPSIAAS+PPH LAP
Sbjct: 654  KSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLPSIAASMPPHPLAP 712

Query: 1014 PWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQ 835
            P +HG TQ+GHNAV GMV SNPVPA Q PL  QSI NSS                PASSQ
Sbjct: 713  PLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPAPPLPPGPPPASSQ 772

Query: 834  MIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMR 661
            MIPG+QS+GLVVP+QQPGHAFSGLI+SLMAQGLISLT +TPVQDSVGLEFN DLHK+R
Sbjct: 773  MIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVGLEFNADLHKLR 830


>gb|KDO75521.1| hypothetical protein CISIN_1g003277mg [Citrus sinensis]
            gi|641856756|gb|KDO75522.1| hypothetical protein
            CISIN_1g003277mg [Citrus sinensis]
            gi|641856757|gb|KDO75523.1| hypothetical protein
            CISIN_1g003277mg [Citrus sinensis]
          Length = 797

 Score = 1114 bits (2882), Expect = 0.0
 Identities = 602/838 (71%), Positives = 651/838 (77%), Gaps = 11/838 (1%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPS--LAFSNNNGKAMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            MESGKILQNPRPSPS  LAF+NNN KAMPNELAQKPSTPIIDKF             VGD
Sbjct: 1    MESGKILQNPRPSPSPSLAFTNNN-KAMPNELAQKPSTPIIDKFRALLKLREAEAR-VGD 58

Query: 2967 GEGT-LSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPV 2791
            G GT LS  EIVQLYE VLAELT NSKPIITDLTIIAGEQR HGDGIAEAI  RILE PV
Sbjct: 59   GAGTTLSTNEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRILEAPV 118

Query: 2790 DQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFP 2611
            + KLPSLYLLDSIVKNI KEYVRYFSS +PEVFCEAYRQV+P+++S+M+HLFGTWSTVFP
Sbjct: 119  NHKLPSLYLLDSIVKNINKEYVRYFSSRLPEVFCEAYRQVHPDLYSAMQHLFGTWSTVFP 178

Query: 2610 QSVLQKIEAELHF-SQVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQ 2434
            Q+VL+KIEAEL F SQVNKQ SNVNS RAS SPRPTHGIHVNPKYIRQ EHSN DS    
Sbjct: 179  QAVLRKIEAELQFSSQVNKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS---- 234

Query: 2433 VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPT 2254
                                             VGGQR NPAG V RA+ +LGANKLHP+
Sbjct: 235  ---------------------------------VGGQRSNPAGSVGRATFALGANKLHPS 261

Query: 2253 STSRLGRPFSPLGIGSEVDEFAVENSPRRLEGASPARPVFDFGLSRAISRNEDMSEWRNP 2074
            STSRLGR  SPL IGSE DEFAVENSPRRLEG SP+ PVFD+G+ RAI RNE++SEWRNP
Sbjct: 262  STSRLGRSLSPLAIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNP 321

Query: 2073 NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTSDNKPSQVGCLGRNGMGNKVASRSWQ 1894
            NR E+TS +YNLSNG EHQG RALIDAYGSDRR S+NKP QVG +G NGMGNKVASRSWQ
Sbjct: 322  NRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQ 381

Query: 1893 NTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXX 1714
            NTEEEE+DWEDMSPTL+DRG+KNDF PSSVP +GS  AR D SKL ASS ESD+R+NH  
Sbjct: 382  NTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSS 441

Query: 1713 XXXXXXLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQ------NLPHHFLRSS 1555
                  LDD S+T EDSV  +GSGRGTGK+SGFQSEPN NLG +      NLPHHF RSS
Sbjct: 442  QAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSS 501

Query: 1554 HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPD 1375
            H  NG GRGRDS IPFPGSGVPS+G VDKAAP+IDKFV ADAQ VRPPAVVSR+G SGPD
Sbjct: 502  HPPNGRGRGRDSHIPFPGSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPD 560

Query: 1374 XXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPS 1195
                              AP+NLHKPHLPP QP Y QQK+TRTQFDSIN AG +LNQGPS
Sbjct: 561  ----LLSTGAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGRILNQGPS 616

Query: 1194 KSLYNPESKELILMKPLQPRDQHATPNQQNQGQAQFLSQEARNNFLPSIAASVPPHLLAP 1015
            KSLYN ESKEL LMKP Q  DQHATPNQQNQG+AQFLSQEA NNFLPSIAAS+PPH LAP
Sbjct: 617  KSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLPSIAASMPPHPLAP 675

Query: 1014 PWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQ 835
            P +HG TQ+GHNAV GMV SNPVPA Q PL  QSI NSS                PASSQ
Sbjct: 676  PLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPAPPLPPGPPPASSQ 735

Query: 834  MIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMR 661
            MIPG+QS+GLVVP+QQPGHAFSGLI+SLMAQGLISLT +TPVQDSVGLEFN DLHK+R
Sbjct: 736  MIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVGLEFNADLHKLR 793


>ref|XP_012091393.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Jatropha
            curcas] gi|643703717|gb|KDP20781.1| hypothetical protein
            JCGZ_21252 [Jatropha curcas]
          Length = 1029

 Score = 1079 bits (2791), Expect = 0.0
 Identities = 615/1057 (58%), Positives = 728/1057 (68%), Gaps = 48/1057 (4%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPSLAFSNNNGKAMP-NELAQKPSTPIIDKFXXXXXXXXXXXXRVGDG 2965
            MESGK+LQNPR      F  ++ K M  NEL+QK +  ++D+F               + 
Sbjct: 1    MESGKVLQNPR------FPTSSAKTMASNELSQKTTPSLLDRFRALLKQREEEARVSAED 54

Query: 2964 EG----TLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEV 2797
            +     TLS EEIVQLYE+VL ELT NSKPIITDLTIIAGE RE G+GIA+AI ARI+EV
Sbjct: 55   DDAAGPTLSAEEIVQLYELVLDELTFNSKPIITDLTIIAGELREQGEGIADAICARIIEV 114

Query: 2796 PVDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTV 2617
            PV+QKLPSLYLLDSIVKNIG++YVRYFS+ +PEVFCEAYRQV+P ++ SMRHLFGTWS+V
Sbjct: 115  PVEQKLPSLYLLDSIVKNIGRDYVRYFSTRLPEVFCEAYRQVHPNLYPSMRHLFGTWSSV 174

Query: 2616 FPQSVLQKIEAELHFS-QVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNI 2440
            FP SVL KIE +L FS QVN Q S ++S +AS SPRPTHGIHVNPKY+RQLE+S  D+N 
Sbjct: 175  FPPSVLGKIETQLQFSPQVNSQSSGLSSLKASDSPRPTHGIHVNPKYLRQLENSTSDNNA 234

Query: 2439 QQ-VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVV---RASSSLGA 2272
            QQ VRG SS +KVYGQKP+I YD +D +H+EV+SSQVG QRLN  G V      S  LGA
Sbjct: 235  QQHVRGASSTLKVYGQKPAIAYDEYDSDHAEVTSSQVGAQRLNTVGTVGTVGHTSFMLGA 294

Query: 2271 NKLHPTSTSRLGRPFSPLGIG------SEVDEFAVENSPRR-LEGASPARPVFDFGLSRA 2113
            NKL+ +S+SRL R  +P  +G      SEVD+FA+ NSPRR +EGASP+ P+FD+G SR 
Sbjct: 295  NKLYASSSSRLAR-HAPSSVGAERPLPSEVDDFAMGNSPRRFVEGASPSHPLFDYGPSRP 353

Query: 2112 ISRNEDMSEWRNP-------NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRT--SDNK 1960
            I+R+E+ ++WR         NR+ET S+AY+LSNG EHQG RALIDAYG D+R+  S++K
Sbjct: 354  IARDEETTDWRRKHYSDDIQNRLET-SVAYSLSNGHEHQGPRALIDAYGEDKRSRVSNSK 412

Query: 1959 PSQVGCLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKA 1780
            P Q+  L  +GM NKVA R WQNTEEEE+DWEDMSPTL DR + NDF  SSVPP G +  
Sbjct: 413  PLQIDRLDVDGMVNKVAPRLWQNTEEEEFDWEDMSPTLADRNRSNDFLSSSVPPFGGVGT 472

Query: 1779 RYDLSKLAASSFESDIRSNHXXXXXXXXLDDPSITVEDSVPV-GSGRG-TGKLSGFQSEP 1606
            R        S  +SDIRSN         +DD S   EDS+P+ GSGRG T KL GFQ E 
Sbjct: 473  RPGFGTRGPSQLDSDIRSNRSAQAQLSLIDDSSDIAEDSIPILGSGRGSTAKLPGFQPER 532

Query: 1605 NINLGYQ------NLPHHFLRSSHHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKF 1444
            N  +          L +H+ +S+  LN  GR R+ ++PF  S V S  V D  AP +DK 
Sbjct: 533  NQIMASHYPREAWKLLNHYPQSTD-LNAKGRNREFRMPFSRS-VISSSVSDSLAPLVDKL 590

Query: 1443 VDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQ 1264
             D D Q VRPP + SR+G S                       +N+HK H PP+ P +  
Sbjct: 591  PDTDGQYVRPPTLPSRVGSS------------IAPSTAGVWPLVNVHKSHPPPVHPIFPP 638

Query: 1263 QKRTRTQFDSINVAGNVLNQGPSKSLYNPE-------SKELILMK-PLQPRDQHATPNQQ 1108
            QK++R+QFDS N    V+NQG  +S ++ E       S E  L K PL P  +HAT NQQ
Sbjct: 639  QKQSRSQFDSTNARNTVVNQGLQQSTFSSEQQFNGFESMEPSLTKQPLLP-SRHATLNQQ 697

Query: 1107 NQGQA-----QFL-SQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGHNAVTGMVPSNPV 946
            NQ Q      QFL S EAR NF  SI+ S+P        +     QGH A   MV SNPV
Sbjct: 698  NQAQVNHFQPQFLPSNEARENFPLSIS-SLPHQTRVSTLDPVHATQGHGAAMSMVRSNPV 756

Query: 945  PAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLVVPNQQPGHAFSG 766
            P + LPLP  +IPN+                    +QMI   Q+ G V PNQ PG AFSG
Sbjct: 757  PFM-LPLPVNNIPNTLQPHAGTRPPLPPGPHP---AQMIHVPQNVGPVAPNQPPGSAFSG 812

Query: 765  LINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLPRQCTTCGLRFKC 586
            LI SLMAQGLISLTK+TP QDSVGLEFN DL K+RHE AI+ LYA+LPRQCTTCGLRFKC
Sbjct: 813  LIGSLMAQGLISLTKQTPGQDSVGLEFNADLIKVRHESAISALYADLPRQCTTCGLRFKC 872

Query: 585  QEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPILEK 406
            QEEHSSHMDWHVT+NRMSKNRK KPSRKWFV  SMWLSG EALGTDAVPGFLP E ++EK
Sbjct: 873  QEEHSSHMDWHVTKNRMSKNRKHKPSRKWFVDTSMWLSGAEALGTDAVPGFLPTESVVEK 932

Query: 405  KDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNGSTSGMDRSQLGP 226
            KDDEEMAVPADE+QNACALCGEPFDDFYSDETEEWMYKGAVYMNA NGST+GM+RSQLGP
Sbjct: 933  KDDEEMAVPADEEQNACALCGEPFDDFYSDETEEWMYKGAVYMNAPNGSTAGMERSQLGP 992

Query: 225  IVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            IVHAKCRSES+V P EDFR ++GG SE+ S RKRLRS
Sbjct: 993  IVHAKCRSESSVAPPEDFRCDDGGDSEETSHRKRLRS 1029


>ref|XP_007026008.1| PCF11P-similar protein 4, putative isoform 1 [Theobroma cacao]
            gi|508781374|gb|EOY28630.1| PCF11P-similar protein 4,
            putative isoform 1 [Theobroma cacao]
          Length = 1004

 Score = 1065 bits (2755), Expect = 0.0
 Identities = 593/1021 (58%), Positives = 695/1021 (68%), Gaps = 37/1021 (3%)
 Frame = -3

Query: 3066 MPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGDGEG------TLSKEEIVQLYEVVLAEL 2905
            M NELAQK    I ++F              G  +G      T S+ EIVQLYE VL+EL
Sbjct: 1    MSNELAQKQQPSISERFKALLKQREDDLRVSGGDDGDDEVAATPSRGEIVQLYEAVLSEL 60

Query: 2904 TINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVDQKLPSLYLLDSIVKNIGKEYV 2725
            T NSKPIITDLTIIAGEQREHG+GIA+AI ARILEVPV+QKLPSLYLLDSIVKNIG+EYV
Sbjct: 61   TFNSKPIITDLTIIAGEQREHGEGIADAICARILEVPVEQKLPSLYLLDSIVKNIGREYV 120

Query: 2724 RYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQSVLQKIEAELHFSQ-VNKQPS 2548
            R+FSS +PEVFCEAYRQVNP ++ +MRHLFGTWSTVFP SVL+KIE +L FSQ  N+Q  
Sbjct: 121  RHFSSRLPEVFCEAYRQVNPNLYPAMRHLFGTWSTVFPPSVLRKIEIQLQFSQSANQQSP 180

Query: 2547 NVNSPRASVSPRPTHGIHVNPKYIRQLEH-SNPDSNIQQVRGTSSNMKVYGQKPSIGYDG 2371
             V S R+S SPRPTHGIHVNPKY+RQLE  S  DSN Q VRGTS+ +KVYGQK SIG+D 
Sbjct: 181  GVTSLRSSESPRPTHGIHVNPKYLRQLEQQSGADSNTQHVRGTSAALKVYGQKHSIGFDE 240

Query: 2370 FDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIGS----- 2206
            FD +H+EV SS VG +RL   G V R S  +GANK    S S + RPFSP  IGS     
Sbjct: 241  FDSDHTEVPSSHVGVRRLRSTGNVGRTSVVVGANK----SASIVSRPFSPSRIGSDRLVL 296

Query: 2205 -EVDEFAVENSPRR-LEGASPARPVFDFGLSRAISRNEDMSEWRNP-------NRIETTS 2053
             EVD+   + SPRR +EG SP+RPVFD+G  RAI R+E+  EW+         NR E++ 
Sbjct: 297  SEVDDLPSDGSPRRFVEGTSPSRPVFDYGRGRAIVRDEETREWQRKHSYDDYHNRSESSL 356

Query: 2052 IAYNLSNGDEHQGHRALIDAYGSDRRT--SDNKPSQVGCLGRNGMGNKVASRSWQNTEEE 1879
             AY LSNG E Q  RALIDAYG+DR    S++KP+QV  L  NGMGNKV   SWQNTEEE
Sbjct: 357  NAYKLSNGHERQTPRALIDAYGNDRGKGISNSKPAQVERLAVNGMGNKVTPISWQNTEEE 416

Query: 1878 EYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXX 1699
            E+DWEDMSPTL DR + NDF  SSVPP GSI  R        +  ES+ RS+        
Sbjct: 417  EFDWEDMSPTLADRSRSNDFSLSSVPPFGSIGER-------PAGLESNSRSSRATQTQLP 469

Query: 1698 XLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQNLPHHFLRSSHHLNGSGRGRD 1522
             +DD S   +++V  + SGRG+ ++              N  +HF + S +L+  GRGRD
Sbjct: 470  LVDDSSTIPKNAVSSLSSGRGSSQILHSHHPQEA----WNSSYHFSQPSRNLHAKGRGRD 525

Query: 1521 SQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXX 1342
             QIPF  SG+ S+G  +K  P IDK  D  +Q +RPPAVV R G S  D           
Sbjct: 526  FQIPFSASGIQSLGG-EKIVPLIDKLPDGGSQFLRPPAVVPRTGSSSLDSVTVGARPAII 584

Query: 1341 XXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE---- 1174
                    P+N+HK   P M  +Y  Q+ +R+QFDSIN    V+N+GP+K  Y  E    
Sbjct: 585  PSTTGVWPPVNVHKSQPPAMHSNYSLQQHSRSQFDSINPINMVMNEGPNKRSYMAEQFDR 644

Query: 1173 --SKELILMKPLQPRDQHATPNQQNQGQAQFL------SQEARNNFLPSIAASVPPHLLA 1018
              SKE  L +  Q  DQ A  +Q+NQ Q   L      SQ+ R NFL S  A +PP LLA
Sbjct: 645  FESKEQSLTRVPQLPDQRAALHQRNQMQVTSLQPHFLPSQDLRENFLSSATAPLPPRLLA 704

Query: 1017 PPWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASS 838
            P  NHG T Q H AV  MVPSNP+   Q PLP  ++P  S                PAS 
Sbjct: 705  PSLNHGYTPQMHGAVISMVPSNPIHVAQPPLPIPNMPTVSLQLQGGALPPLPPGPPPAS- 763

Query: 837  QMIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRH 658
            QMIP  Q++G ++PNQ     +SGLI+SLMAQGLISLTK TP+QD VGLEFN DL K+RH
Sbjct: 764  QMIPATQNAGPLLPNQAQSGPYSGLISSLMAQGLISLTKPTPIQDPVGLEFNADLLKVRH 823

Query: 657  ECAITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMW 478
            E +I+ LYA+LPRQCTTCGLRFK QEEHS+HMDWHVTRNRMSKNRKQKPSRKWFVSASMW
Sbjct: 824  ESSISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMW 883

Query: 477  LSGTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWM 298
            LSG EALGTDAVPGFLP E ++EKKDDEE+AVPADEDQ+ CALCGEPFDDFYSDETEEWM
Sbjct: 884  LSGAEALGTDAVPGFLPTENVVEKKDDEELAVPADEDQSVCALCGEPFDDFYSDETEEWM 943

Query: 297  YKGAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLR 118
            Y+GAVYMNA NGS  GMDRSQLGPIVHAKCRSES+V+PSEDF   +GG+SED S+RKRLR
Sbjct: 944  YRGAVYMNAPNGSIEGMDRSQLGPIVHAKCRSESSVVPSEDFVRCDGGNSEDSSQRKRLR 1003

Query: 117  S 115
            S
Sbjct: 1004 S 1004


>ref|XP_011037706.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X5 [Populus euphratica]
          Length = 1035

 Score = 1050 bits (2714), Expect = 0.0
 Identities = 585/1053 (55%), Positives = 710/1053 (67%), Gaps = 44/1053 (4%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPSLAFSNNNGKAMPNELA-QKPS-TPIIDKFXXXXXXXXXXXXRV-G 2971
            M+  K+L NP+ +   A +      MPNEL  QKPS + ++DKF               G
Sbjct: 1    MQPTKLL-NPKTATKAAAAAAVTTTMPNELLPQKPSASSVLDKFRSLLKQRQGSAVEDDG 59

Query: 2970 DGEG-TLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVP 2794
             G+G +LS E++V++YE VL ELT NSKPIITDLTIIAGEQREHG+GIA+ + ARI+E P
Sbjct: 60   GGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVEAP 119

Query: 2793 VDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVF 2614
            VDQKLPSLYLLDSIVKNIG+EY+R+FSS +PEVFCEAYRQV+P ++ SMRHLFGTWS+VF
Sbjct: 120  VDQKLPSLYLLDSIVKNIGREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSSVF 179

Query: 2613 PQSVLQKIEAELHFS-QVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQ 2437
            P SVL KIE +L FS QVN Q S++ S RAS SPRP HGIHVNPKY+RQL+HS  D+N+Q
Sbjct: 180  PSSVLHKIETQLDFSPQVNNQSSSLTSFRASESPRPPHGIHVNPKYLRQLDHSTADNNVQ 239

Query: 2436 QVRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHP 2257
              +GTS N+K+YG+KP++GYD ++ + +E  SSQVG         + R S  LG+NKL P
Sbjct: 240  HTKGTS-NLKIYGKKPAVGYDEYESDQAEAISSQVG---------MGRTSLILGSNKLQP 289

Query: 2256 TSTSRLGRPFSPLGIG------SEVDEFAVENSPRR-LEGASPARPVFDFGLSRAISRNE 2098
            +STSRL R   PL  G      SE+D+ AV NSPRR +EG SP+RP+FD+G SR I R+E
Sbjct: 290  SSTSRLARRLLPLTTGAERPLSSEIDDLAVGNSPRRFVEGLSPSRPLFDYGHSRTIVRDE 349

Query: 2097 DMSEWR-------NPNRIETTSIAYNLSNGDEHQGHRALIDAYGSDR--RTSDNKPSQVG 1945
            + +E R       N NR E  S  Y LSNG EHQG RALIDAYG DR  R + +KP  + 
Sbjct: 350  EANELRRNNYSDDNHNRFEP-SARYRLSNGLEHQGPRALIDAYGDDRGKRITSSKPLHIE 408

Query: 1944 CLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLS 1765
             L  NGM NKVASRSWQNTEEEE+DWEDMSPTL + G+ NDF PSS+PP GS+  R    
Sbjct: 409  QLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDFLPSSIPPFGSVVPRPAFG 468

Query: 1764 KLAASSFESDIRSNHXXXXXXXXLDDPSITVEDSVPV-GSGRG-TGKLSGFQSEPNINLG 1591
            +L+A   ESDIRSN         +D  S   E++V + GSGRG T K+ GF++E N  LG
Sbjct: 469  RLSAIHAESDIRSNRSSLAPMASVDGSSNIAEEAVSILGSGRGSTSKIPGFRTERNQILG 528

Query: 1590 YQ------NLPHHFLRSSHHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADA 1429
             +      N P H  +S+H LN  GRGRD Q+P  GSGV S+G  +  +P  +K  D DA
Sbjct: 529  SRHHQEAWNFPPHIHQSAHLLNSKGRGRDFQMPLSGSGVSSLGG-ENYSPLAEKLPDIDA 587

Query: 1428 QLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTR 1249
            QL R PA+ SR G S  D                   P+N  K   PP+   +   +++R
Sbjct: 588  QLNRSPAIASRWG-SNIDSTSSGTWSSVVPPSSGVWPPVNARKSLPPPVHRIFPPPEQSR 646

Query: 1248 TQFDSINVAGNVLNQGPSKSLYNPE-------SKELILMKPLQPRDQHATPNQQNQGQA- 1093
            +QFD IN +  V+NQ   K    PE       +K+   MKP    +QHA  NQQNQ    
Sbjct: 647  SQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPTPMSNQHAALNQQNQAHVN 706

Query: 1092 -----QFLSQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGHNAVTGMVPSNPVPAVQLP 928
                 Q  S E R NF PS   S+PP  L  P NHG    GH+    MVPSN +PAVQLP
Sbjct: 707  PFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGHSTAISMVPSNALPAVQLP 766

Query: 927  LPFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLVVPNQQPGHAFSGLINSLM 748
            LP  +IPN                      Q +P +Q+    VP Q  G AFSGL NSLM
Sbjct: 767  LPVNNIPNM----LHSQVGLRPPLPPGPPPQTMPFSQNVSSSVPGQPSGSAFSGLFNSLM 822

Query: 747  AQGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLPRQCTTCGLRFKCQEEHSS 568
            AQGLISLTK++PVQDSVGLEFN DL K+R+E AI+ LY +LPRQCTTCGLRFKCQEEHS+
Sbjct: 823  AQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLPRQCTTCGLRFKCQEEHST 882

Query: 567  HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPILEKKDDEEM 388
            HMDWHVT+NRMSKNRKQK SR WFVSASMWLSG EALGTDA PGFLP E  +EKKDD  M
Sbjct: 883  HMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAAPGFLPTETTVEKKDDHGM 942

Query: 387  AVPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNGSTSGMDRSQLGPIVHAKC 208
            AVPADE+Q+ CALCGEPFDDFYSDETEEWMY+GAVY+N++NGST+GMDRSQLGPIVHAKC
Sbjct: 943  AVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNGSTAGMDRSQLGPIVHAKC 1002

Query: 207  RSESTVIPSEDFRHNEG--GSSEDGSRRKRLRS 115
            RS+S+V+P EDF H+EG   +SE+G++RKR+RS
Sbjct: 1003 RSDSSVVPPEDFGHDEGLQVNSEEGNQRKRMRS 1035


>ref|XP_011037705.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X4 [Populus euphratica]
          Length = 1051

 Score = 1043 bits (2698), Expect = 0.0
 Identities = 585/1069 (54%), Positives = 710/1069 (66%), Gaps = 60/1069 (5%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPSLAFSNNNGKAMPNELA-QKPS-TPIIDKFXXXXXXXXXXXXRV-G 2971
            M+  K+L NP+ +   A +      MPNEL  QKPS + ++DKF               G
Sbjct: 1    MQPTKLL-NPKTATKAAAAAAVTTTMPNELLPQKPSASSVLDKFRSLLKQRQGSAVEDDG 59

Query: 2970 DGEG-TLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVP 2794
             G+G +LS E++V++YE VL ELT NSKPIITDLTIIAGEQREHG+GIA+ + ARI+E P
Sbjct: 60   GGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVEAP 119

Query: 2793 VDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVF 2614
            VDQKLPSLYLLDSIVKNIG+EY+R+FSS +PEVFCEAYRQV+P ++ SMRHLFGTWS+VF
Sbjct: 120  VDQKLPSLYLLDSIVKNIGREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSSVF 179

Query: 2613 PQSVLQKIEAELHFS-QVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDS--- 2446
            P SVL KIE +L FS QVN Q S++ S RAS SPRP HGIHVNPKY+RQL+HS  D+   
Sbjct: 180  PSSVLHKIETQLDFSPQVNNQSSSLTSFRASESPRPPHGIHVNPKYLRQLDHSTADNTGW 239

Query: 2445 ---------------NIQQVRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNP 2311
                           N+Q  +GTS N+K+YG+KP++GYD ++ + +E  SSQVG      
Sbjct: 240  SILTSKAKNVIQSLQNVQHTKGTS-NLKIYGKKPAVGYDEYESDQAEAISSQVG------ 292

Query: 2310 AGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIG------SEVDEFAVENSPRR-LEGAS 2152
               + R S  LG+NKL P+STSRL R   PL  G      SE+D+ AV NSPRR +EG S
Sbjct: 293  ---MGRTSLILGSNKLQPSSTSRLARRLLPLTTGAERPLSSEIDDLAVGNSPRRFVEGLS 349

Query: 2151 PARPVFDFGLSRAISRNEDMSEWR-------NPNRIETTSIAYNLSNGDEHQGHRALIDA 1993
            P+RP+FD+G SR I R+E+ +E R       N NR E  S  Y LSNG EHQG RALIDA
Sbjct: 350  PSRPLFDYGHSRTIVRDEEANELRRNNYSDDNHNRFEP-SARYRLSNGLEHQGPRALIDA 408

Query: 1992 YGSDR--RTSDNKPSQVGCLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDF 1819
            YG DR  R + +KP  +  L  NGM NKVASRSWQNTEEEE+DWEDMSPTL + G+ NDF
Sbjct: 409  YGDDRGKRITSSKPLHIEQLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDF 468

Query: 1818 FPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXXXLDDPSITVEDSVPV-GSGR 1642
             PSS+PP GS+  R    +L+A   ESDIRSN         +D  S   E++V + GSGR
Sbjct: 469  LPSSIPPFGSVVPRPAFGRLSAIHAESDIRSNRSSLAPMASVDGSSNIAEEAVSILGSGR 528

Query: 1641 G-TGKLSGFQSEPNINLGYQ------NLPHHFLRSSHHLNGSGRGRDSQIPFPGSGVPSM 1483
            G T K+ GF++E N  LG +      N P H  +S+H LN  GRGRD Q+P  GSGV S+
Sbjct: 529  GSTSKIPGFRTERNQILGSRHHQEAWNFPPHIHQSAHLLNSKGRGRDFQMPLSGSGVSSL 588

Query: 1482 GVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLH 1303
            G  +  +P  +K  D DAQL R PA+ SR G S  D                   P+N  
Sbjct: 589  GG-ENYSPLAEKLPDIDAQLNRSPAIASRWG-SNIDSTSSGTWSSVVPPSSGVWPPVNAR 646

Query: 1302 KPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE-------SKELILMKPL 1144
            K   PP+   +   +++R+QFD IN +  V+NQ   K    PE       +K+   MKP 
Sbjct: 647  KSLPPPVHRIFPPPEQSRSQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPT 706

Query: 1143 QPRDQHATPNQQNQGQA------QFLSQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGH 982
               +QHA  NQQNQ         Q  S E R NF PS   S+PP  L  P NHG    GH
Sbjct: 707  PMSNQHAALNQQNQAHVNPFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGH 766

Query: 981  NAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLV 802
            +    MVPSN +PAVQLPLP  +IPN                      Q +P +Q+    
Sbjct: 767  STAISMVPSNALPAVQLPLPVNNIPNM----LHSQVGLRPPLPPGPPPQTMPFSQNVSSS 822

Query: 801  VPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLP 622
            VP Q  G AFSGL NSLMAQGLISLTK++PVQDSVGLEFN DL K+R+E AI+ LY +LP
Sbjct: 823  VPGQPSGSAFSGLFNSLMAQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLP 882

Query: 621  RQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAV 442
            RQCTTCGLRFKCQEEHS+HMDWHVT+NRMSKNRKQK SR WFVSASMWLSG EALGTDA 
Sbjct: 883  RQCTTCGLRFKCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAA 942

Query: 441  PGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNG 262
            PGFLP E  +EKKDD  MAVPADE+Q+ CALCGEPFDDFYSDETEEWMY+GAVY+N++NG
Sbjct: 943  PGFLPTETTVEKKDDHGMAVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNG 1002

Query: 261  STSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            ST+GMDRSQLGPIVHAKCRS+S+V+P EDF H+EG +SE+G++RKR+RS
Sbjct: 1003 STAGMDRSQLGPIVHAKCRSDSSVVPPEDFGHDEGVNSEEGNQRKRMRS 1051


>gb|KDO75524.1| hypothetical protein CISIN_1g003277mg [Citrus sinensis]
          Length = 763

 Score = 1043 bits (2696), Expect = 0.0
 Identities = 574/838 (68%), Positives = 621/838 (74%), Gaps = 11/838 (1%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPS--LAFSNNNGKAMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            MESGKILQNPRPSPS  LAF+NNN KAMPNELAQKPSTPIIDKF             VGD
Sbjct: 1    MESGKILQNPRPSPSPSLAFTNNN-KAMPNELAQKPSTPIIDKFRALLKLREAEAR-VGD 58

Query: 2967 GEGT-LSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPV 2791
            G GT LS  EIVQLYE VLAELT NSKPIITDLTIIAGEQR HGDGIAEAI  RIL    
Sbjct: 59   GAGTTLSTNEIVQLYETVLAELTFNSKPIITDLTIIAGEQRAHGDGIAEAICTRIL---- 114

Query: 2790 DQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFP 2611
                                          EVFCEAYRQV+P+++S+M+HLFGTWSTVFP
Sbjct: 115  ------------------------------EVFCEAYRQVHPDLYSAMQHLFGTWSTVFP 144

Query: 2610 QSVLQKIEAELHF-SQVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQ 2434
            Q+VL+KIEAEL F SQVNKQ SNVNS RAS SPRPTHGIHVNPKYIRQ EHSN DS    
Sbjct: 145  QAVLRKIEAELQFSSQVNKQSSNVNSLRASESPRPTHGIHVNPKYIRQFEHSNTDS---- 200

Query: 2433 VRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPT 2254
                                             VGGQR NPAG V RA+ +LGANKLHP+
Sbjct: 201  ---------------------------------VGGQRSNPAGSVGRATFALGANKLHPS 227

Query: 2253 STSRLGRPFSPLGIGSEVDEFAVENSPRRLEGASPARPVFDFGLSRAISRNEDMSEWRNP 2074
            STSRLGR  SPL IGSE DEFAVENSPRRLEG SP+ PVFD+G+ RAI RNE++SEWRNP
Sbjct: 228  STSRLGRSLSPLAIGSEGDEFAVENSPRRLEGTSPSHPVFDYGIGRAIGRNEEVSEWRNP 287

Query: 2073 NRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTSDNKPSQVGCLGRNGMGNKVASRSWQ 1894
            NR E+TS +YNLSNG EHQG RALIDAYGSDRR S+NKP QVG +G NGMGNKVASRSWQ
Sbjct: 288  NRFESTSTSYNLSNGHEHQGPRALIDAYGSDRRASNNKPPQVGHMGINGMGNKVASRSWQ 347

Query: 1893 NTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXX 1714
            NTEEEE+DWEDMSPTL+DRG+KNDF PSSVP +GS  AR D SKL ASS ESD+R+NH  
Sbjct: 348  NTEEEEFDWEDMSPTLLDRGRKNDFLPSSVPLYGSTGARPDFSKLNASSLESDVRTNHSS 407

Query: 1713 XXXXXXLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQ------NLPHHFLRSS 1555
                  LDD S+T EDSV  +GSGRGTGK+SGFQSEPN NLG +      NLPHHF RSS
Sbjct: 408  QAQLPLLDDSSVTAEDSVSLLGSGRGTGKVSGFQSEPNQNLGSRYPQESWNLPHHFSRSS 467

Query: 1554 HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPD 1375
            H  NG GRGRDS IPFPGSGVPS+G VDKAAP+IDKFV ADAQ VRPPAVVSR+G SGPD
Sbjct: 468  HPPNGRGRGRDSHIPFPGSGVPSLG-VDKAAPYIDKFVGADAQFVRPPAVVSRIGSSGPD 526

Query: 1374 XXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPS 1195
                              AP+NLHKPHLPP QP Y QQK+TRTQFDSIN AG +LNQGPS
Sbjct: 527  ----LLSTGAIQSSTGAWAPMNLHKPHLPPGQPVYPQQKQTRTQFDSINAAGRILNQGPS 582

Query: 1194 KSLYNPESKELILMKPLQPRDQHATPNQQNQGQAQFLSQEARNNFLPSIAASVPPHLLAP 1015
            KSLYN ESKEL LMKP Q  DQHATPNQQNQG+AQFLSQEA NNFLPSIAAS+PPH LAP
Sbjct: 583  KSLYNSESKELSLMKP-QLHDQHATPNQQNQGRAQFLSQEATNNFLPSIAASMPPHPLAP 641

Query: 1014 PWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQ 835
            P +HG TQ+GHNAV GMV SNPVPA Q PL  QSI NSS                PASSQ
Sbjct: 642  PLSHGYTQRGHNAVMGMVSSNPVPAGQQPLHVQSIQNSSLHLQGRPAPPLPPGPPPASSQ 701

Query: 834  MIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMR 661
            MIPG+QS+GLVVP+QQPGHAFSGLI+SLMAQGLISLT +TPVQDSVGLEFN DLHK+R
Sbjct: 702  MIPGSQSAGLVVPSQQPGHAFSGLISSLMAQGLISLTTQTPVQDSVGLEFNADLHKLR 759


>ref|XP_011037702.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like isoform
            X1 [Populus euphratica] gi|743885952|ref|XP_011037703.1|
            PREDICTED: polyadenylation and cleavage factor homolog
            4-like isoform X2 [Populus euphratica]
            gi|743885954|ref|XP_011037704.1| PREDICTED:
            polyadenylation and cleavage factor homolog 4-like
            isoform X3 [Populus euphratica]
          Length = 1053

 Score = 1038 bits (2685), Expect = 0.0
 Identities = 585/1071 (54%), Positives = 710/1071 (66%), Gaps = 62/1071 (5%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPSLAFSNNNGKAMPNELA-QKPS-TPIIDKFXXXXXXXXXXXXRV-G 2971
            M+  K+L NP+ +   A +      MPNEL  QKPS + ++DKF               G
Sbjct: 1    MQPTKLL-NPKTATKAAAAAAVTTTMPNELLPQKPSASSVLDKFRSLLKQRQGSAVEDDG 59

Query: 2970 DGEG-TLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVP 2794
             G+G +LS E++V++YE VL ELT NSKPIITDLTIIAGEQREHG+GIA+ + ARI+E P
Sbjct: 60   GGDGASLSMEDVVEIYETVLNELTFNSKPIITDLTIIAGEQREHGEGIADVLCARIVEAP 119

Query: 2793 VDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVF 2614
            VDQKLPSLYLLDSIVKNIG+EY+R+FSS +PEVFCEAYRQV+P ++ SMRHLFGTWS+VF
Sbjct: 120  VDQKLPSLYLLDSIVKNIGREYIRHFSSRLPEVFCEAYRQVDPSLYPSMRHLFGTWSSVF 179

Query: 2613 PQSVLQKIEAELHFS-QVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDS--- 2446
            P SVL KIE +L FS QVN Q S++ S RAS SPRP HGIHVNPKY+RQL+HS  D+   
Sbjct: 180  PSSVLHKIETQLDFSPQVNNQSSSLTSFRASESPRPPHGIHVNPKYLRQLDHSTADNTGW 239

Query: 2445 ---------------NIQQVRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNP 2311
                           N+Q  +GTS N+K+YG+KP++GYD ++ + +E  SSQVG      
Sbjct: 240  SILTSKAKNVIQSLQNVQHTKGTS-NLKIYGKKPAVGYDEYESDQAEAISSQVG------ 292

Query: 2310 AGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIG------SEVDEFAVENSPRR-LEGAS 2152
               + R S  LG+NKL P+STSRL R   PL  G      SE+D+ AV NSPRR +EG S
Sbjct: 293  ---MGRTSLILGSNKLQPSSTSRLARRLLPLTTGAERPLSSEIDDLAVGNSPRRFVEGLS 349

Query: 2151 PARPVFDFGLSRAISRNEDMSEWR-------NPNRIETTSIAYNLSNGDEHQGHRALIDA 1993
            P+RP+FD+G SR I R+E+ +E R       N NR E  S  Y LSNG EHQG RALIDA
Sbjct: 350  PSRPLFDYGHSRTIVRDEEANELRRNNYSDDNHNRFEP-SARYRLSNGLEHQGPRALIDA 408

Query: 1992 YGSDR--RTSDNKPSQVGCLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDF 1819
            YG DR  R + +KP  +  L  NGM NKVASRSWQNTEEEE+DWEDMSPTL + G+ NDF
Sbjct: 409  YGDDRGKRITSSKPLHIEQLAVNGMHNKVASRSWQNTEEEEFDWEDMSPTLSEHGRTNDF 468

Query: 1818 FPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXXXLDDPSITVEDSVPV-GSGR 1642
             PSS+PP GS+  R    +L+A   ESDIRSN         +D  S   E++V + GSGR
Sbjct: 469  LPSSIPPFGSVVPRPAFGRLSAIHAESDIRSNRSSLAPMASVDGSSNIAEEAVSILGSGR 528

Query: 1641 G-TGKLSGFQSEPNINLGYQ------NLPHHFLRSSHHLNGSGRGRDSQIPFPGSGVPSM 1483
            G T K+ GF++E N  LG +      N P H  +S+H LN  GRGRD Q+P  GSGV S+
Sbjct: 529  GSTSKIPGFRTERNQILGSRHHQEAWNFPPHIHQSAHLLNSKGRGRDFQMPLSGSGVSSL 588

Query: 1482 GVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLH 1303
            G  +  +P  +K  D DAQL R PA+ SR G S  D                   P+N  
Sbjct: 589  GG-ENYSPLAEKLPDIDAQLNRSPAIASRWG-SNIDSTSSGTWSSVVPPSSGVWPPVNAR 646

Query: 1302 KPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE-------SKELILMKPL 1144
            K   PP+   +   +++R+QFD IN +  V+NQ   K    PE       +K+   MKP 
Sbjct: 647  KSLPPPVHRIFPPPEQSRSQFDPINASSTVINQVLQKGSAMPEQPFNGFENKDYNSMKPT 706

Query: 1143 QPRDQHATPNQQNQGQA------QFLSQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGH 982
               +QHA  NQQNQ         Q  S E R NF PS   S+PP  L  P NHG    GH
Sbjct: 707  PMSNQHAALNQQNQAHVNPFQPQQLPSHETRENFHPSGVTSMPPRPLGQPLNHGYNTHGH 766

Query: 981  NAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLV 802
            +    MVPSN +PAVQLPLP  +IPN                      Q +P +Q+    
Sbjct: 767  STAISMVPSNALPAVQLPLPVNNIPNM----LHSQVGLRPPLPPGPPPQTMPFSQNVSSS 822

Query: 801  VPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLP 622
            VP Q  G AFSGL NSLMAQGLISLTK++PVQDSVGLEFN DL K+R+E AI+ LY +LP
Sbjct: 823  VPGQPSGSAFSGLFNSLMAQGLISLTKQSPVQDSVGLEFNADLLKLRYESAISALYGDLP 882

Query: 621  RQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAV 442
            RQCTTCGLRFKCQEEHS+HMDWHVT+NRMSKNRKQK SR WFVSASMWLSG EALGTDA 
Sbjct: 883  RQCTTCGLRFKCQEEHSTHMDWHVTKNRMSKNRKQKSSRNWFVSASMWLSGAEALGTDAA 942

Query: 441  PGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNG 262
            PGFLP E  +EKKDD  MAVPADE+Q+ CALCGEPFDDFYSDETEEWMY+GAVY+N++NG
Sbjct: 943  PGFLPTETTVEKKDDHGMAVPADEEQSTCALCGEPFDDFYSDETEEWMYRGAVYLNSSNG 1002

Query: 261  STSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEG--GSSEDGSRRKRLRS 115
            ST+GMDRSQLGPIVHAKCRS+S+V+P EDF H+EG   +SE+G++RKR+RS
Sbjct: 1003 STAGMDRSQLGPIVHAKCRSDSSVVPPEDFGHDEGLQVNSEEGNQRKRMRS 1053


>ref|XP_002518518.1| conserved hypothetical protein [Ricinus communis]
            gi|223542363|gb|EEF43905.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1023

 Score = 1028 bits (2657), Expect = 0.0
 Identities = 586/1050 (55%), Positives = 705/1050 (67%), Gaps = 41/1050 (3%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPSLAFSNNNGKAMP-NELAQKPSTPIIDKFXXXXXXXXXXXXRVGD- 2968
            M+S KILQNPR +     +N+    MP N+L+QK    ++D+F               + 
Sbjct: 1    MDSEKILQNPRLN-----TNSIKPIMPSNDLSQKQPPSLLDRFKVLLKQKEEQARVSMED 55

Query: 2967 ----GEGTLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILE 2800
                G  TLS EEIVQLYE+VL ELT NSKPIITDLTIIAGE REHG GIA+AI ARI+E
Sbjct: 56   DDVAGTSTLSSEEIVQLYELVLDELTFNSKPIITDLTIIAGELREHGAGIADAICARIVE 115

Query: 2799 VPVDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWST 2620
            VPVDQKLPSLYLLDSIVKNIG++YVR+FSS +PEVFC AY+QV+P +H+SMRHLF TWST
Sbjct: 116  VPVDQKLPSLYLLDSIVKNIGRDYVRHFSSRLPEVFCAAYKQVHPNLHTSMRHLFRTWST 175

Query: 2619 VFPQSVLQKIEAELHFSQV---NKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPD 2449
            VFP SVL KIE++L FS     N   S ++S +AS SPR T+ IHVNPKY+R LE S  +
Sbjct: 176  VFPPSVLSKIESQLQFSSQANNNNHSSGLSSLKASDSPRTTNVIHVNPKYVR-LEPSPSE 234

Query: 2448 SNIQQVRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGAN 2269
            ++ Q VRG SS +KV+G KP IG D FD +H EV+ S+VG QRLN  G    +S   G N
Sbjct: 235  NSAQHVRGASSTLKVHGHKPYIGCDEFDSDHVEVTPSKVGAQRLNTMGNTGPSSFVHGPN 294

Query: 2268 KLHPTSTSRLGRPFSPLGIG------SEVDEFAVENSPRR-LEGASPARPVFDFGLSRAI 2110
            +LHP S+SRL R  SP  IG      SEVD+F   NSPRR LEGASP+ PV D G  R++
Sbjct: 295  RLHPPSSSRLTRRLSPSRIGAERPLPSEVDDFMAGNSPRRFLEGASPSHPVLDCGPLRSM 354

Query: 2109 SRNEDMSEWR-------NPNRIETTSIAYNLSNGDEHQGHRALIDAYGSDRRTS--DNKP 1957
             R+E+ +EWR       N  + E  SIAYNLSNG EHQG RALIDAYG D+R    ++K 
Sbjct: 355  GRDEETNEWRRKHYSDDNHKKFEA-SIAYNLSNGHEHQGPRALIDAYGEDKRKRIPNSKH 413

Query: 1956 SQVGCLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKAR 1777
             Q+  L  +G  NKV  RSWQNTEEEE+DWEDMSPTL+DR + N     SVPP G   AR
Sbjct: 414  LQIERLDVDGTANKVGPRSWQNTEEEEFDWEDMSPTLIDRSRSNGLL-LSVPPFGGAGAR 472

Query: 1776 YDLSKLAASSFESDIRSNHXXXXXXXXLDDPSITVEDSVPV-GSGRGTG-KLSGFQSEPN 1603
                  AAS  +SD+RS          +DD S   +D++ + G GRG+G KLSGFQ++ N
Sbjct: 473  PGFGTRAASRLDSDLRSKQSGQAQLPLVDDSSNITDDTMSLLGPGRGSGGKLSGFQTDRN 532

Query: 1602 INLGYQ------NLPHHFLRSSHHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFV 1441
              +G +        PHHF +S+  +N  GR RD Q+PF GSG+ S G  +  A  +D+  
Sbjct: 533  QTMGSRYPREAWKSPHHFSQSADLINAKGRNRDLQMPFSGSGISSSGS-EILASLVDQLP 591

Query: 1440 DADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQ 1261
            DADAQ++RPP + SRM  S                       +N+HK H PP++P +  Q
Sbjct: 592  DADAQIIRPPTLPSRMSSS------------TALSSTGVWPLVNVHKSHQPPLRPIFPPQ 639

Query: 1260 KRTRTQFDSINVAGNVLNQGPSKS-------LYNPESKELILMK-PLQPRDQHATPNQQN 1105
             ++R+  D  N +   +NQG  KS       L   ESKE  L K PL P  QHA  NQQN
Sbjct: 640  MQSRSLLDPRNASNTAVNQGFQKSSFLSEQQLNGLESKEHSLTKQPLLP-SQHAAMNQQN 698

Query: 1104 QGQAQFLSQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGHNAVTGMVPSNPVPAVQLPL 925
            QGQ     Q  R NF PS+A S+PPH LAP ++H    Q H +    + SN V ++ LPL
Sbjct: 699  QGQVNPF-QPQRENFPPSVA-SLPPHPLAPTFDHRYVTQAHGSAMSRIHSNLVSSMPLPL 756

Query: 924  PFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLVVPNQQPGHAFSGLINSLMA 745
            P  +IPN+                   +S MIP  Q++G V  NQ  G AFSGLINSL+A
Sbjct: 757  PVNNIPNTMHLQVGVRPPLPPGPPP--ASHMIPIPQNAGPVASNQPAGGAFSGLINSLVA 814

Query: 744  QGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLPRQCTTCGLRFKCQEEHSSH 565
            QGLISL K+TPVQDSVGLEFN DL K+RHE AI+ LYA+LPRQCTTCGLRFKCQE+HSSH
Sbjct: 815  QGLISL-KQTPVQDSVGLEFNADLLKVRHESAISALYADLPRQCTTCGLRFKCQEDHSSH 873

Query: 564  MDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPILEKKDDEEMA 385
            MDWHVTRNRMSKNRKQKPSRKWFVSA+MWL G EALGTDAVPGFLP E ++EKKDDEEMA
Sbjct: 874  MDWHVTRNRMSKNRKQKPSRKWFVSATMWLRGAEALGTDAVPGFLPTEAVVEKKDDEEMA 933

Query: 384  VPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNGSTSGMDRSQLGPIVHAKCR 205
            VPADE+QNACALCGEPFDDFYSDETEEWMYKGAVY+NA +GST+ MDRSQLGPIVHAKCR
Sbjct: 934  VPADEEQNACALCGEPFDDFYSDETEEWMYKGAVYLNAPSGSTASMDRSQLGPIVHAKCR 993

Query: 204  SESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            SES+V P ED R NEG  +E+ S+RKR+RS
Sbjct: 994  SESSVAPPEDIRSNEGPDTEEASQRKRMRS 1023


>gb|KHG24664.1| Pre-mRNA cleavage complex 2 Pcf11 [Gossypium arboreum]
          Length = 1004

 Score = 1020 bits (2638), Expect = 0.0
 Identities = 578/1019 (56%), Positives = 677/1019 (66%), Gaps = 34/1019 (3%)
 Frame = -3

Query: 3069 AMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVG----DGEGTLSKEEIVQLYEVVLAELT 2902
            A+ NELAQK    I ++F              G    D   T + EEIVQLYEVVL+ELT
Sbjct: 2    AISNELAQKQLPSISERFKALLKQREDELRVSGGIADDDGATPTTEEIVQLYEVVLSELT 61

Query: 2901 INSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVDQKLPSLYLLDSIVKNIGKEYVR 2722
             NSKPIITDLTIIAGEQREHG+GIA+AI ARI+EVPV+QKLPSLYLLDSIVKNIG+EYVR
Sbjct: 62   FNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVR 121

Query: 2721 YFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQSVLQKIEAELHFSQV-NKQPSN 2545
            YFSS +PEVFCEAYRQVNP +H +MRHLFGTWSTVFP SVL+KIE +L FSQ  N+Q S 
Sbjct: 122  YFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSG 181

Query: 2544 VNSPRASVSPRPTHGIHVNPKYIRQLEH-SNPDSNIQQVRGTSSNMKVYGQKPSIGYDGF 2368
            V S ++S SPRPTHGIHVNPKY+RQLE  S  DSN Q VRG S+  K+YGQK +I YD F
Sbjct: 182  VTSLQSSESPRPTHGIHVNPKYLRQLEQQSGADSNTQHVRGMSAGQKLYGQKHTIAYDEF 241

Query: 2367 DFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIGS------ 2206
            D +H+EV SS VG QRL+  G V R S ++GANK   +S SR+ RPFSP  IGS      
Sbjct: 242  DSDHTEVPSSHVGVQRLSSTGNVGRTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSS 301

Query: 2205 EVDEFAVENSPRRL-EGASPARP-VFDFGLSRAISRNEDMSEWRNP-------NRIETTS 2053
            E+D+   ++SPRR  E ASP+RP VFDFG  R   R+E+  EW          N  E++ 
Sbjct: 302  EIDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSESSL 361

Query: 2052 IAYNLSNGDEHQGHRALIDAYGSDRRT--SDNKPSQVGCLGRNGMGNKVASRSWQNTEEE 1879
             AY LSNG+E Q  RALIDAYG+DR    S++KP QV  L  NGMGNKV  RSWQNTEEE
Sbjct: 362  NAYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDLNGMGNKVTPRSWQNTEEE 421

Query: 1878 EYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXX 1699
            E+DWEDMSPTL DR + N+F  SSV   GSI AR      A        RSN        
Sbjct: 422  EFDWEDMSPTLADR-RSNEFSVSSVSTFGSIGARP-----AGLESNRSSRSNQTQLAL-- 473

Query: 1698 XLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQNLPHHFLRSSHHLNGSGRGRD 1522
              D+ S   ED+VP + SG G  ++      P       +  + F +SSH L+  GRGRD
Sbjct: 474  --DESSTIPEDTVPSLSSGHGLNQIQ----RPRYPQDAWSNSYPFSQSSHQLHAKGRGRD 527

Query: 1521 SQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXX 1342
             + PF  SG+ S+G  DK  P I+K  +  +Q VRPPA+V R G S  D           
Sbjct: 528  FRTPFSASGISSLGG-DKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVGAQPAML 586

Query: 1341 XXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE---- 1174
                    P+N+ K   P    +Y  Q+  R+ FDS+N     +NQG +K  Y PE    
Sbjct: 587  PLTAGAWPPVNVLKSQPPTAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDN 646

Query: 1173 --SKELILMKPLQPRDQHATPNQQNQG----QAQFLSQEARNNFLPSIAASVPPHLLAPP 1012
              SKE  L    Q   Q     Q+N      Q  F   EAR++FL S    +PP LLAP 
Sbjct: 647  FESKEQSLTTVPQLPGQRPALRQRNSLHGSLQLHFTPHEARDSFLSSATGPLPPRLLAPS 706

Query: 1011 WNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQM 832
             NHG + Q H A   MVPSNPVP  Q PL   ++P  S                PAS QM
Sbjct: 707  MNHGYSPQMHGAGISMVPSNPVPVAQPPLSIPNMPTGSLHLQGGAIPPLPPGPRPAS-QM 765

Query: 831  IPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHEC 652
            +P  Q++G ++PNQ  G  F+GLI+SLMAQGLISLTK TP+QDSVGLEF+ DL K+RHE 
Sbjct: 766  MPATQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHES 825

Query: 651  AITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 472
            AI+ LYA+LPRQCTTCGLRFK QEEHS+HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS
Sbjct: 826  AISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 885

Query: 471  GTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYK 292
            G EALGTDAVPGFLP E I+EKKDDEE+AVPADEDQN CALCGEPFDDFYSDETEEWMY+
Sbjct: 886  GAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYR 945

Query: 291  GAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            GAVYMNA +GS  G+DRSQLGPIVHAKCRSES+V+P EDF   +GG+ ED S+RKRLRS
Sbjct: 946  GAVYMNAPSGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLRS 1004


>ref|XP_002316604.2| pre-mRNA cleavage complex-related family protein [Populus
            trichocarpa] gi|550327247|gb|EEE97216.2| pre-mRNA
            cleavage complex-related family protein [Populus
            trichocarpa]
          Length = 1031

 Score = 1019 bits (2634), Expect = 0.0
 Identities = 576/1062 (54%), Positives = 710/1062 (66%), Gaps = 53/1062 (4%)
 Frame = -3

Query: 3141 MESGKILQNPRPSPSLAFSNNNGKAMPNELA--QKPSTPIIDKFXXXXXXXXXXXXRVGD 2968
            M+S K+L NP+ +   A +  N   MPNEL   + P++ I+DKF              G 
Sbjct: 1    MQSTKLL-NPKTATKAAEAVTN--TMPNELLPQKSPASSIMDKFRYLLKQRQQSAVEEGG 57

Query: 2967 GEGTLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVD 2788
            G   LS E++V++YE VL ELT NSKPIITDLTIIAGE REHG+GIA+A+  RI+EVPVD
Sbjct: 58   G---LSTEDMVEIYETVLNELTFNSKPIITDLTIIAGELREHGEGIADALCGRIVEVPVD 114

Query: 2787 QKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQ 2608
             KLPSLYLLDSIVKNIG+EY+ YFSS +PEVFCEAY QV+P ++ SMRHLFGTWS+VFP 
Sbjct: 115  LKLPSLYLLDSIVKNIGREYIGYFSSRLPEVFCEAYGQVDPRLYPSMRHLFGTWSSVFPS 174

Query: 2607 SVLQKIEAELHFS-QVNKQPSNVNSPRASVSPRPTHGIHVNPKYIRQLEHSNPDSNIQQV 2431
            SVL+KIE +L  S Q+N Q S++ S +AS SPRP+HGIHVNPKY+RQ++ S  D+N+Q  
Sbjct: 175  SVLRKIETQLQLSSQINNQSSSLTSLKASESPRPSHGIHVNPKYLRQMDSSR-DNNVQHT 233

Query: 2430 RGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTS 2251
            +GTS N+K+YG KP++GYD ++ + +EV SSQVG         V RAS +LG+NKL P+S
Sbjct: 234  KGTS-NLKMYGHKPAVGYDEYETDQAEVISSQVG---------VDRASLTLGSNKLQPSS 283

Query: 2250 TSRLGRPFSPLGIG------SEVDEFAVENSPRR-LEGASPARPVFDFGLSRAISRNEDM 2092
            TSRL R  SP   G      SE+D+FA  NSPRR +EG SP+ P FD+G  R + R+++ 
Sbjct: 284  TSRLARRLSPSTTGAERPSSSEIDDFAAGNSPRRFVEGLSPSHPPFDYGHGRVVVRDDET 343

Query: 2091 SEWR-----NPNRIETTSIAYNLSNGDEHQGHRALIDAYGSDR--RTSDNKPSQVGCLGR 1933
            +E R     + N     + A +LSNG E QG RALIDAYG DR  R  ++KP  +  L  
Sbjct: 344  NELRRKHYSDDNHYRFEASARSLSNGHEQQGPRALIDAYGDDRGKRIPNSKPLHIEQLAV 403

Query: 1932 NGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAA 1753
             GM NKVA RSWQNTEEEE+DWEDMSPTL+DRG+ NDF P SVPP GS+  R    +L A
Sbjct: 404  IGMHNKVAPRSWQNTEEEEFDWEDMSPTLLDRGRSNDFLPPSVPPFGSVVPRPGFGRLNA 463

Query: 1752 SSFESDIRSNHXXXXXXXXLDDPSITVEDSVPV-GSGRG-TGKLSGFQSEPNINLGYQ-- 1585
               +SDIRSN         +DD S    D+V + GSGRG T K+ G  +E N   G +  
Sbjct: 464  IRADSDIRSNGSSLTPMALVDDSSNMGGDAVSILGSGRGSTSKMPGLLTERNQISGSRYS 523

Query: 1584 ----NLPHHFLRSSHHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVR 1417
                NLP H  + S  LN  GRGRD Q+P  GSGV S+G  +   P ++K  D DA+LVR
Sbjct: 524  QEARNLPPHIRQPSRLLNAKGRGRDFQMPLSGSGVSSLGG-ENFNPLVEKLPDMDAKLVR 582

Query: 1416 PPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFD 1237
            PPA+ SR+G S  D                   P+N+HK   PP+   +  +K++R+QFD
Sbjct: 583  PPAIASRLG-SSIDSNSSGTWSSAVLPLSGAWPPVNVHKSLPPPVHSTFPPEKQSRSQFD 641

Query: 1236 SINVAGNVLNQG-------PSKSLYNPESKELILMKPLQPRDQHATPNQQNQG-----QA 1093
             +N +  V NQ        P +S  + ESK+ +LMKP    +QHA  NQQNQ      Q 
Sbjct: 642  PVNTSSTVTNQALQKASVMPEQSFNSFESKDYVLMKPTPLPNQHAALNQQNQAHFNPFQP 701

Query: 1092 QFL-SQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQ 916
            +FL S EAR NF PS  A +PP  LA P NHG T  GH +      SN +P+VQLPL   
Sbjct: 702  KFLPSHEARENFHPSGIALLPPRPLARPMNHGYTTHGHGS------SNALPSVQLPLAVS 755

Query: 915  SIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLVVPNQQPGHAFSGLINSLMAQGL 736
            ++PN+                     Q +P  Q++    P Q  G AFSGLINSLMAQGL
Sbjct: 756  NVPNT-----LHSQVGVRPPLPQGPPQTMPFPQNASSGAPAQPSGIAFSGLINSLMAQGL 810

Query: 735  ISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLPRQCTTCGLRFKCQEEHSSHMDW 556
            I++TK+TPVQDSVGLEFN DL K+R+E AI+ LY++LPRQCTTCGLR KCQEEHSSHMDW
Sbjct: 811  ITMTKQTPVQDSVGLEFNADLLKLRYESAISALYSDLPRQCTTCGLRLKCQEEHSSHMDW 870

Query: 555  HVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPILEKKDDEEMAVPA 376
            HVT+NRMSKNRKQ PSRKWFVSASMWLSG EALGTDAVPGFLP E I+EKKDD+EMAVPA
Sbjct: 871  HVTKNRMSKNRKQNPSRKWFVSASMWLSGAEALGTDAVPGFLPTETIVEKKDDDEMAVPA 930

Query: 375  DEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNGSTSGMDRSQLGPIVHAKCRSES 196
            DE+Q+ CALCGEPFDDFYSDETEEWMYKGAVY+NA +GST+ MDRSQLGPIVHAKCRS+S
Sbjct: 931  DEEQSTCALCGEPFDDFYSDETEEWMYKGAVYLNAPDGSTADMDRSQLGPIVHAKCRSDS 990

Query: 195  TVIPSEDFRHNEG---------------GSSEDGSRRKRLRS 115
            + +PSEDF H EG               G++E+GS RKR+RS
Sbjct: 991  SGVPSEDFGHEEGLAAKLNHGNTSDFGVGNTEEGS-RKRMRS 1031


>ref|XP_010655357.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Vitis
            vinifera]
          Length = 1046

 Score = 1016 bits (2628), Expect = 0.0
 Identities = 567/1050 (54%), Positives = 700/1050 (66%), Gaps = 42/1050 (4%)
 Frame = -3

Query: 3141 MESGKILQNPRPSP-SLAFSNNNG---------KAMPNELAQKPSTPIIDKFXXXXXXXX 2992
            M+  + + + R +P +L F+   G         K M NE++QKP  PI+D+F        
Sbjct: 1    MDGDRFVVSARENPRTLGFAPERGPGGSATATAKPMSNEISQKPLVPIVDRFKALLKQRE 60

Query: 2991 XXXXRV-GDGEGTLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAEAIS 2815
                 + GD     + EEIV+LYE+VL+EL  NSKPIITDLTIIAG+ +EH DGIA+AI 
Sbjct: 61   DELRVLSGDDVPPPTTEEIVRLYEIVLSELIFNSKPIITDLTIIAGDHKEHADGIADAIC 120

Query: 2814 ARILEVPVDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMRHLF 2635
            ARI+EV V+QKLPSLYLLDSIVKNIG++Y+++FSS +PEVFCEAYRQV+P ++++MRHLF
Sbjct: 121  ARIVEVSVEQKLPSLYLLDSIVKNIGRDYIKHFSSRLPEVFCEAYRQVHPNLYTAMRHLF 180

Query: 2634 GTWSTVFPQSVLQKIEAELHFSQ-VNKQPSNVNSPRASVSPRPTHGIHVNPKYIR---QL 2467
            GTWS VFP SVL+KIEA+L FS  +N Q S + S RAS SPRPTH IHVNPKY+    Q 
Sbjct: 181  GTWSAVFPPSVLRKIEAQLQFSPTLNNQSSGMASLRASESPRPTHSIHVNPKYLEARHQF 240

Query: 2466 EHSNPDSNIQQVRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRAS 2287
            EHS  DSN+Q  RGTSS +KVYGQKP+IGYD +D  H+EV SSQ   QRLN  G V R  
Sbjct: 241  EHSPVDSNMQHSRGTSSTLKVYGQKPAIGYDEYDSGHTEVISSQARAQRLNSTGSVGRTP 300

Query: 2286 SSLGANKLHPTSTSRLGRPFSP-LGIGSE----VDEFAVENSPRRL-EGASPARPVFDFG 2125
             +LGA+KL P+ST+R+ +  SP +G         ++F+++NSPRR+ E ASP+   F++G
Sbjct: 301  FALGADKLLPSSTARVAKSTSPRIGTAGSSSPPAEKFSMDNSPRRVVERASPSHRGFEYG 360

Query: 2124 LSRAISRNEDMSE-----WRNPNRIETTSIAYNLSNGDEHQGHRALIDAYGSDR--RTSD 1966
            L R++ R+E+ S+     W N +R ET S A+NLSNG E QG RALIDAYG+DR  RT +
Sbjct: 361  LVRSMGRDEETSDRQRKHWSN-DRFET-SAAHNLSNGRERQGLRALIDAYGNDRGQRTLN 418

Query: 1965 NKPSQVGCLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHGSI 1786
            +KP +VG L  NG  NKV  ++WQNTEEEEYDWEDM+PTL +R + N+   SSV P GS 
Sbjct: 419  DKPPKVGHLDMNGTDNKVPKKAWQNTEEEEYDWEDMNPTLANRRQCNNILQSSVSPFGSF 478

Query: 1785 KARYDLSKLAASSFESDI-RSNHXXXXXXXXLDDPSITVEDSVPVGS-GRGTGKLSGFQS 1612
            + R     L A+  ESD  RS          +DD  +  ED VP  S GRG+    GF +
Sbjct: 479  RTRPGSGALGAAPLESDFNRSKWSGQAQLSMVDDSPVIAEDVVPTTSLGRGSISKPGFGN 538

Query: 1611 EPNINLGYQ-----NLPHHFLRSS-HHLNGSGRGRDSQIPFPGSGVPSMGVVDKAAPFID 1450
            E   +  +      NL H   +SS H+ N  GRG++   PF GSG+ S    +  +P I 
Sbjct: 539  ETKFHGSHYPQESWNLVHRVPQSSQHNRNAKGRGKNFNTPFLGSGISS-SAAETISPLIS 597

Query: 1449 KFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQPDY 1270
               DADAQL R P V SRMG S  +                   P+N+HK HLPP+  + 
Sbjct: 598  NIPDADAQLRRLPTVASRMGSSSLNSMNVEVQSAAAPASTGMWPPVNVHKTHLPPLLSNL 657

Query: 1269 LQQKRTRTQFDSINVAGNVLNQGPSKSLYNPESKELILMKPLQPRDQHATP-NQQNQGQA 1093
             Q K+ R QF+ +N    V+NQ P+KSL+ PE    +    +  R   + P N +NQ Q 
Sbjct: 658  PQTKQIRNQFNLMNATTAVVNQDPNKSLFLPELDSKL--PQMANRQAGSIPLNGKNQTQV 715

Query: 1092 -----QFLSQEARNNFLPSIAASVPPHLLAPPWNHGCTQQGHNAVTGMVPSNPVPAVQLP 928
                 QFL QE   NF+PS  A V  + +APP N G T QGH A T  +  NPVP V   
Sbjct: 716  TRLQPQFLPQETHGNFVPSTTAPVSSYSVAPPLNPGYTPQGHAAATSTILLNPVPGVHSS 775

Query: 927  LPFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLVVPNQQPGHAFSGLINSLM 748
            +P  +I NSS                PA+SQMI   Q++G +V NQQPG A SGLI+SLM
Sbjct: 776  IPIHNISNSSVHFQGGALPPLPPGPPPATSQMINIPQNTGPIVSNQQPGSALSGLISSLM 835

Query: 747  AQGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLPRQCTTCGLRFKCQEEHSS 568
            AQGLISL K+  VQDSVG+EFN DL K+RHE AI+ LY ++ RQCTTCGLRFKCQEEHSS
Sbjct: 836  AQGLISLAKQPTVQDSVGIEFNVDLLKVRHESAISALYGDMSRQCTTCGLRFKCQEEHSS 895

Query: 567  HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLPAEPILEKKDDEEM 388
            HMDWHVT+NR+SKNRKQKPSRKWFVSASMWLS  EALGTDAVPGFLP E I EKKDDEE+
Sbjct: 896  HMDWHVTKNRISKNRKQKPSRKWFVSASMWLSSAEALGTDAVPGFLPTETIAEKKDDEEL 955

Query: 387  AVPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNGSTSGMDRSQLGPIVHAKC 208
            AVPADEDQN CALCGEPFDDFYSDETEEWMYKGAVY+NA  GS +GMDRSQLGPIVHAKC
Sbjct: 956  AVPADEDQNVCALCGEPFDDFYSDETEEWMYKGAVYLNAPEGSAAGMDRSQLGPIVHAKC 1015

Query: 207  RSESTVIPSEDFRHNEGGSSEDGSRRKRLR 118
            RSES V+  EDF  +EGG+ E+GS+RKR+R
Sbjct: 1016 RSESNVVSPEDFGQDEGGNMEEGSKRKRMR 1045


>ref|XP_012450328.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
            [Gossypium raimondii] gi|763800201|gb|KJB67156.1|
            hypothetical protein B456_010G178200 [Gossypium
            raimondii]
          Length = 1004

 Score = 1012 bits (2616), Expect = 0.0
 Identities = 575/1019 (56%), Positives = 675/1019 (66%), Gaps = 34/1019 (3%)
 Frame = -3

Query: 3069 AMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVG----DGEGTLSKEEIVQLYEVVLAELT 2902
            A+ NELAQK    I ++F              G    D   T + EEIVQLYEVVL+ELT
Sbjct: 2    AISNELAQKQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELT 61

Query: 2901 INSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVDQKLPSLYLLDSIVKNIGKEYVR 2722
             NSKPIITDLTIIAGEQREHG+GIA+AI ARI+EVPV+QKLPSLYLLDSIVKNIG+EYVR
Sbjct: 62   FNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVR 121

Query: 2721 YFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQSVLQKIEAELHFSQV-NKQPSN 2545
            YFSS +PEVFCEAYRQVNP +H +MRHLFGTWSTVFP SVL+KIE +L FSQ  N+Q S 
Sbjct: 122  YFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSG 181

Query: 2544 VNSPRASVSPRPTHGIHVNPKYIRQLEH-SNPDSNIQQVRGTSSNMKVYGQKPSIGYDGF 2368
            V S ++S SPRPTHGIHVNPKY+RQ E  S  DSN Q VRG S+  K+YGQK +I YD F
Sbjct: 182  VTSLQSSESPRPTHGIHVNPKYLRQFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEF 241

Query: 2367 DFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIGS------ 2206
            D +H+EV SS VG QRL+  G V   S ++GANK   +S SR+ RPFSP  IGS      
Sbjct: 242  DSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSS 301

Query: 2205 EVDEFAVENSPRRL-EGASPARP-VFDFGLSRAISRNEDMSEWRNP-------NRIETTS 2053
            EVD+   ++SPRR  E ASP+RP VFDFG  R   R+E+  EW          N  E + 
Sbjct: 302  EVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSEGSL 361

Query: 2052 IAYNLSNGDEHQGHRALIDAYGSDRRT--SDNKPSQVGCLGRNGMGNKVASRSWQNTEEE 1879
             +Y LSNG+E Q  RALIDAYG+DR    S++KP QV  L  NGMGNKV  RSWQNTEEE
Sbjct: 362  NSYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEE 421

Query: 1878 EYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXX 1699
            E+DWEDMSPTL DR + N+F  SSV   GSI AR      A        RSN        
Sbjct: 422  EFDWEDMSPTLADR-RSNEFSVSSVATFGSIGARP-----AGLESNRSSRSNQTQLAL-- 473

Query: 1698 XLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQNLPHHFLRSSHHLNGSGRGRD 1522
              D+ S   ED+VP + SG G  ++      P       +  + F +SSH L+  GRGRD
Sbjct: 474  --DESSTIPEDAVPSLSSGHGLNQIQ----RPRYPQDAWSNSYPFSQSSHQLHAKGRGRD 527

Query: 1521 SQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXX 1342
              IPF  SG+ S+G  +K  P I+K  +  +Q VRPPA+V R G S  D           
Sbjct: 528  FWIPFSASGISSLGG-EKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVVTQPAML 586

Query: 1341 XXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE---- 1174
                    P+N+ K   P    +Y  Q+  R+ FDS+N     +NQG +K  Y PE    
Sbjct: 587  PLTAGAWPPVNVPKSQPPNAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDN 646

Query: 1173 --SKELILMKPLQPRDQHATPNQQNQG----QAQFLSQEARNNFLPSIAASVPPHLLAPP 1012
              SKE  L    Q   Q     Q+N      Q  F   +AR++FL S    +PP LLAP 
Sbjct: 647  FESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFPPNDARDSFLSSATGPLPPRLLAPS 706

Query: 1011 WNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQM 832
             NHG + Q H A   MVPSNP+P  Q PL   ++P  S                P +SQM
Sbjct: 707  MNHGYSPQMHGAGISMVPSNPIPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRP-TSQM 765

Query: 831  IPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHEC 652
            +P AQ++G ++PNQ  G  F+GLI+SLMAQGLISLTK TP+QDSVGLEF+ DL K+RHE 
Sbjct: 766  MPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHES 825

Query: 651  AITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 472
            AI+ LYA+LPRQCTTCGLRFK QEEHS+HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS
Sbjct: 826  AISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 885

Query: 471  GTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYK 292
            G EALGTDAVPGFLP E I+EKKDDEE+AVPADEDQN CALCGEPFDDFYSDETEEWMY+
Sbjct: 886  GAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYR 945

Query: 291  GAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            GAVYMNA NGS  G+DRSQLGPIVHAKCRSES+V+P EDF   +GG+ ED S+RKRLRS
Sbjct: 946  GAVYMNAPNGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLRS 1004


>ref|XP_012450329.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X2
            [Gossypium raimondii]
          Length = 1001

 Score =  995 bits (2572), Expect = 0.0
 Identities = 566/1006 (56%), Positives = 664/1006 (66%), Gaps = 34/1006 (3%)
 Frame = -3

Query: 3069 AMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVG----DGEGTLSKEEIVQLYEVVLAELT 2902
            A+ NELAQK    I ++F              G    D   T + EEIVQLYEVVL+ELT
Sbjct: 2    AISNELAQKQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELT 61

Query: 2901 INSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVDQKLPSLYLLDSIVKNIGKEYVR 2722
             NSKPIITDLTIIAGEQREHG+GIA+AI ARI+EVPV+QKLPSLYLLDSIVKNIG+EYVR
Sbjct: 62   FNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVR 121

Query: 2721 YFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQSVLQKIEAELHFSQV-NKQPSN 2545
            YFSS +PEVFCEAYRQVNP +H +MRHLFGTWSTVFP SVL+KIE +L FSQ  N+Q S 
Sbjct: 122  YFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSG 181

Query: 2544 VNSPRASVSPRPTHGIHVNPKYIRQLEH-SNPDSNIQQVRGTSSNMKVYGQKPSIGYDGF 2368
            V S ++S SPRPTHGIHVNPKY+RQ E  S  DSN Q VRG S+  K+YGQK +I YD F
Sbjct: 182  VTSLQSSESPRPTHGIHVNPKYLRQFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEF 241

Query: 2367 DFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIGS------ 2206
            D +H+EV SS VG QRL+  G V   S ++GANK   +S SR+ RPFSP  IGS      
Sbjct: 242  DSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSS 301

Query: 2205 EVDEFAVENSPRRL-EGASPARP-VFDFGLSRAISRNEDMSEWRNP-------NRIETTS 2053
            EVD+   ++SPRR  E ASP+RP VFDFG  R   R+E+  EW          N  E + 
Sbjct: 302  EVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSEGSL 361

Query: 2052 IAYNLSNGDEHQGHRALIDAYGSDRRT--SDNKPSQVGCLGRNGMGNKVASRSWQNTEEE 1879
             +Y LSNG+E Q  RALIDAYG+DR    S++KP QV  L  NGMGNKV  RSWQNTEEE
Sbjct: 362  NSYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEE 421

Query: 1878 EYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXX 1699
            E+DWEDMSPTL DR + N+F  SSV   GSI AR      A        RSN        
Sbjct: 422  EFDWEDMSPTLADR-RSNEFSVSSVATFGSIGARP-----AGLESNRSSRSNQTQLAL-- 473

Query: 1698 XLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQNLPHHFLRSSHHLNGSGRGRD 1522
              D+ S   ED+VP + SG G  ++      P       +  + F +SSH L+  GRGRD
Sbjct: 474  --DESSTIPEDAVPSLSSGHGLNQIQ----RPRYPQDAWSNSYPFSQSSHQLHAKGRGRD 527

Query: 1521 SQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXX 1342
              IPF  SG+ S+G  +K  P I+K  +  +Q VRPPA+V R G S  D           
Sbjct: 528  FWIPFSASGISSLGG-EKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVVTQPAML 586

Query: 1341 XXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE---- 1174
                    P+N+ K   P    +Y  Q+  R+ FDS+N     +NQG +K  Y PE    
Sbjct: 587  PLTAGAWPPVNVPKSQPPNAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDN 646

Query: 1173 --SKELILMKPLQPRDQHATPNQQNQG----QAQFLSQEARNNFLPSIAASVPPHLLAPP 1012
              SKE  L    Q   Q     Q+N      Q  F   +AR++FL S    +PP LLAP 
Sbjct: 647  FESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFPPNDARDSFLSSATGPLPPRLLAPS 706

Query: 1011 WNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQM 832
             NHG + Q H A   MVPSNP+P  Q PL   ++P  S                P +SQM
Sbjct: 707  MNHGYSPQMHGAGISMVPSNPIPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRP-TSQM 765

Query: 831  IPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHEC 652
            +P AQ++G ++PNQ  G  F+GLI+SLMAQGLISLTK TP+QDSVGLEF+ DL K+RHE 
Sbjct: 766  MPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHES 825

Query: 651  AITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 472
            AI+ LYA+LPRQCTTCGLRFK QEEHS+HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS
Sbjct: 826  AISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 885

Query: 471  GTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYK 292
            G EALGTDAVPGFLP E I+EKKDDEE+AVPADEDQN CALCGEPFDDFYSDETEEWMY+
Sbjct: 886  GAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYR 945

Query: 291  GAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGG 154
            GAVYMNA NGS  G+DRSQLGPIVHAKCRSES+V+P EDF   +GG
Sbjct: 946  GAVYMNAPNGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGG 991


>gb|KJB67158.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 1024

 Score =  993 bits (2566), Expect = 0.0
 Identities = 565/1005 (56%), Positives = 663/1005 (65%), Gaps = 34/1005 (3%)
 Frame = -3

Query: 3069 AMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVG----DGEGTLSKEEIVQLYEVVLAELT 2902
            A+ NELAQK    I ++F              G    D   T + EEIVQLYEVVL+ELT
Sbjct: 2    AISNELAQKQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYEVVLSELT 61

Query: 2901 INSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVDQKLPSLYLLDSIVKNIGKEYVR 2722
             NSKPIITDLTIIAGEQREHG+GIA+AI ARI+EVPV+QKLPSLYLLDSIVKNIG+EYVR
Sbjct: 62   FNSKPIITDLTIIAGEQREHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVR 121

Query: 2721 YFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQSVLQKIEAELHFSQV-NKQPSN 2545
            YFSS +PEVFCEAYRQVNP +H +MRHLFGTWSTVFP SVL+KIE +L FSQ  N+Q S 
Sbjct: 122  YFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSG 181

Query: 2544 VNSPRASVSPRPTHGIHVNPKYIRQLEH-SNPDSNIQQVRGTSSNMKVYGQKPSIGYDGF 2368
            V S ++S SPRPTHGIHVNPKY+RQ E  S  DSN Q VRG S+  K+YGQK +I YD F
Sbjct: 182  VTSLQSSESPRPTHGIHVNPKYLRQFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEF 241

Query: 2367 DFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIGS------ 2206
            D +H+EV SS VG QRL+  G V   S ++GANK   +S SR+ RPFSP  IGS      
Sbjct: 242  DSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSS 301

Query: 2205 EVDEFAVENSPRRL-EGASPARP-VFDFGLSRAISRNEDMSEWRNP-------NRIETTS 2053
            EVD+   ++SPRR  E ASP+RP VFDFG  R   R+E+  EW          N  E + 
Sbjct: 302  EVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSEGSL 361

Query: 2052 IAYNLSNGDEHQGHRALIDAYGSDRRT--SDNKPSQVGCLGRNGMGNKVASRSWQNTEEE 1879
             +Y LSNG+E Q  RALIDAYG+DR    S++KP QV  L  NGMGNKV  RSWQNTEEE
Sbjct: 362  NSYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEE 421

Query: 1878 EYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXX 1699
            E+DWEDMSPTL DR + N+F  SSV   GSI AR      A        RSN        
Sbjct: 422  EFDWEDMSPTLADR-RSNEFSVSSVATFGSIGARP-----AGLESNRSSRSNQTQLAL-- 473

Query: 1698 XLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQNLPHHFLRSSHHLNGSGRGRD 1522
              D+ S   ED+VP + SG G  ++      P       +  + F +SSH L+  GRGRD
Sbjct: 474  --DESSTIPEDAVPSLSSGHGLNQIQ----RPRYPQDAWSNSYPFSQSSHQLHAKGRGRD 527

Query: 1521 SQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXX 1342
              IPF  SG+ S+G  +K  P I+K  +  +Q VRPPA+V R G S  D           
Sbjct: 528  FWIPFSASGISSLGG-EKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVVTQPAML 586

Query: 1341 XXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE---- 1174
                    P+N+ K   P    +Y  Q+  R+ FDS+N     +NQG +K  Y PE    
Sbjct: 587  PLTAGAWPPVNVPKSQPPNAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDN 646

Query: 1173 --SKELILMKPLQPRDQHATPNQQNQG----QAQFLSQEARNNFLPSIAASVPPHLLAPP 1012
              SKE  L    Q   Q     Q+N      Q  F   +AR++FL S    +PP LLAP 
Sbjct: 647  FESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFPPNDARDSFLSSATGPLPPRLLAPS 706

Query: 1011 WNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQM 832
             NHG + Q H A   MVPSNP+P  Q PL   ++P  S                P +SQM
Sbjct: 707  MNHGYSPQMHGAGISMVPSNPIPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRP-TSQM 765

Query: 831  IPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHEC 652
            +P AQ++G ++PNQ  G  F+GLI+SLMAQGLISLTK TP+QDSVGLEF+ DL K+RHE 
Sbjct: 766  MPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHES 825

Query: 651  AITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 472
            AI+ LYA+LPRQCTTCGLRFK QEEHS+HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS
Sbjct: 826  AISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 885

Query: 471  GTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYK 292
            G EALGTDAVPGFLP E I+EKKDDEE+AVPADEDQN CALCGEPFDDFYSDETEEWMY+
Sbjct: 886  GAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYR 945

Query: 291  GAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEG 157
            GAVYMNA NGS  G+DRSQLGPIVHAKCRSES+V+P EDF   +G
Sbjct: 946  GAVYMNAPNGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDG 990


>ref|XP_007213705.1| hypothetical protein PRUPE_ppa000684mg [Prunus persica]
            gi|462409570|gb|EMJ14904.1| hypothetical protein
            PRUPE_ppa000684mg [Prunus persica]
          Length = 1037

 Score =  981 bits (2536), Expect = 0.0
 Identities = 580/1064 (54%), Positives = 690/1064 (64%), Gaps = 55/1064 (5%)
 Frame = -3

Query: 3141 MESGKIL---QNPR----PSPSLAFSNNNG---KAMP-NELAQKPS--TPIIDKFXXXXX 3001
            M S K+L   +NPR    P   L  S++     KAMP NELAQKP   TPI+D+F     
Sbjct: 1    MASEKLLLSRENPRTLAFPHDRLIASSSAATGTKAMPSNELAQKPQPPTPIVDRFRALLK 60

Query: 3000 XXXXXXXRVGDGE-GTLSKEEIVQLYEVVLAELTINSKPIITDLTIIAGEQREHGDGIAE 2824
                      + +    S EEIVQLYE+VLAEL  NSKPIITDLTIIAGEQR+HG GIA+
Sbjct: 61   QRDDDLRVSPEDDVSPPSTEEIVQLYEMVLAELIFNSKPIITDLTIIAGEQRDHGKGIAD 120

Query: 2823 AISARILEVPVDQKLPSLYLLDSIVKNIGKEYVRYFSSCVPEVFCEAYRQVNPEMHSSMR 2644
            AI ARILEVPV+ KLPSLYLLDSIVKNIG++Y +YFSS +PEVFCEAYRQVNP  + +MR
Sbjct: 121  AICARILEVPVEHKLPSLYLLDSIVKNIGRDYAKYFSSRLPEVFCEAYRQVNPNQYPAMR 180

Query: 2643 HLFGTWSTVFPQSVLQKIEAELHFSQVNKQPSNVNSP-RASVSPRPTHGIHVNPKYIRQL 2467
            HLFGTWS VFP SVL++IE +L FS +  Q S+ ++P RAS SPRPTHGIHVNPKY+RQL
Sbjct: 181  HLFGTWSAVFPPSVLRRIEEQLQFSPLVNQQSSGSTPLRASESPRPTHGIHVNPKYLRQL 240

Query: 2466 EHSNPDSNIQQVRGTSSNMKVYGQKPSIGYDGFDFNHSEVSSSQVGGQRLNPAGGVVRAS 2287
            + SN DS                 KP+I YD +D +++ V S QVG QRLN  G V  + 
Sbjct: 241  DSSNVDS-----------------KPAIMYDKYDPDNAMVLSLQVGSQRLNSTGSVSHSP 283

Query: 2286 SSLGANKLHPTSTSRLGRPFSPLGIG------SEVDEFAVENSPRRL-EGASPARPVFDF 2128
             SLG+N+LHP+ST+RL R  SP  IG      S VDEFA ENSP+R  E ASP+  VFD+
Sbjct: 284  FSLGSNRLHPSSTTRLARSSSPSDIGLDRSLTSAVDEFAAENSPKRFGERASPSNSVFDY 343

Query: 2127 GLSRAISRNEDMSEWRNPNRIE------TTSIAYN-LSNGDEHQGHRALIDAYGSDRRT- 1972
             L  AI R+E+ +E R    ++       TS+ YN LSNG EHQ  RALIDAYG D    
Sbjct: 344  RLGGAIGRDEEPNELRGKRYLDGSQKRFDTSVTYNNLSNGLEHQRPRALIDAYGKDSGDR 403

Query: 1971 SDNKPSQVGCLGRNGMGNKVASRSWQNTEEEEYDWEDMSPTLVDRGKKNDFFPSSVPPHG 1792
            S N    VG LG NG+ +K    SWQNTEEEE+DWEDMSPTL ++ + ND+ PS+ PP  
Sbjct: 404  SLNDIPLVGRLGLNGLDHKATQMSWQNTEEEEFDWEDMSPTLAEQNRSNDYLPSTAPPSR 463

Query: 1791 SIKARYDLSKLAASSFESDIRSNHXXXXXXXXLDDPSITVEDSVP-VGSGRG-TGKLSGF 1618
            S +AR  L  L AS  ESD RS           +  S+  ED VP +G  RG T  +S F
Sbjct: 464  SYRARPSLGTLNASPLESDSRSTWSTQAHLPSAEQSSVITEDPVPPLGFSRGSTSTVSRF 523

Query: 1617 QSEPNINLGYQ------NLPHHFLRSSHH-LNGSGRGRDSQIPFPGSGVPSMGVVDKAAP 1459
            QSE N +LG +      N+P H  +SS + LN  GRGR+ Q+PF  SGV S G  +K + 
Sbjct: 524  QSETNHSLGSRYPQEAWNIPFHLSQSSQNPLNARGRGRNFQMPFVASGVSSGG--EKMSA 581

Query: 1458 FIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXXXXXXXXXAPINLHKPHLPPMQ 1279
            F+DK  D DA+L  P AV SRMG S  D                   P+N+H  H PP  
Sbjct: 582  FVDKLPDVDARLHGPIAVASRMGASSVDTVNADSRPIIPVSMGSRP-PVNVHNSHPPPGH 640

Query: 1278 PDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE-------SKELILMKPLQPRDQHAT 1120
              +  Q + R+Q+ SIN +  V NQ P  SLY PE       +K L   K  Q   Q+A 
Sbjct: 641  SIFALQNQ-RSQYGSINYSNTVKNQAPYNSLYVPEQQLDGYENKLLRSTKLTQLTSQNAR 699

Query: 1119 P---NQQNQGQA-----QFLS-QEARNNFLPSIAASVPPHLLAPPWNHGCTQQGHNAVTG 967
            P   NQ+NQ QA     QFL  QEAR NF+ S   S PP+L  P  NH  T QGH     
Sbjct: 700  PMPVNQRNQVQASPLQPQFLPPQEARENFISSAETSGPPYLGLPSLNHRYTLQGHGGAVS 759

Query: 966  MVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQMIPGAQSSGLVVPNQQ 787
             V +NPVP +    P+  +PNS+                P SSQ I   ++ G VV + Q
Sbjct: 760  TVMANPVPRI----PY--VPNSALHLRGEALPPLPPGPPPPSSQGILSIRNPGPVVSSNQ 813

Query: 786  PGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHECAITILYANLPRQCTT 607
            PG A+SGL +SLMAQGLISLT ++ VQDSVG+EFN DL K+RHE  I  LY++LPRQCTT
Sbjct: 814  PGSAYSGLFSSLMAQGLISLTNQSTVQDSVGIEFNADLLKVRHESVIKALYSDLPRQCTT 873

Query: 606  CGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLSGTEALGTDAVPGFLP 427
            CGLRFKCQEEHSSHMDWHVT+NRMSKNRKQKPSRKWFV+ SMWLSG EALGTDA PGF+P
Sbjct: 874  CGLRFKCQEEHSSHMDWHVTKNRMSKNRKQKPSRKWFVNTSMWLSGAEALGTDAAPGFMP 933

Query: 426  AEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYKGAVYMNATNGSTSGM 247
            AE I+EKK DEEMAVPADEDQN+CALCGEPFDDFYSDETEEWMYKGAVY+NA +GST GM
Sbjct: 934  AETIVEKKSDEEMAVPADEDQNSCALCGEPFDDFYSDETEEWMYKGAVYLNAPDGSTGGM 993

Query: 246  DRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            DRSQLGPIVHAKCRSES+V+ S     +E G  E+GS+RKRLRS
Sbjct: 994  DRSQLGPIVHAKCRSESSVVSSGGLGQDEVGIIEEGSQRKRLRS 1037


>gb|KJB67159.1| hypothetical protein B456_010G178200 [Gossypium raimondii]
          Length = 980

 Score =  958 bits (2476), Expect = 0.0
 Identities = 553/1019 (54%), Positives = 652/1019 (63%), Gaps = 34/1019 (3%)
 Frame = -3

Query: 3069 AMPNELAQKPSTPIIDKFXXXXXXXXXXXXRVG----DGEGTLSKEEIVQLYEVVLAELT 2902
            A+ NELAQK    I ++F              G    D   T + EEIVQLYE       
Sbjct: 2    AISNELAQKQLPSISERFKALLKQREDELRVSGGVADDDGATPTTEEIVQLYE------- 54

Query: 2901 INSKPIITDLTIIAGEQREHGDGIAEAISARILEVPVDQKLPSLYLLDSIVKNIGKEYVR 2722
                             REHG+GIA+AI ARI+EVPV+QKLPSLYLLDSIVKNIG+EYVR
Sbjct: 55   -----------------REHGEGIADAICARIIEVPVEQKLPSLYLLDSIVKNIGREYVR 97

Query: 2721 YFSSCVPEVFCEAYRQVNPEMHSSMRHLFGTWSTVFPQSVLQKIEAELHFSQV-NKQPSN 2545
            YFSS +PEVFCEAYRQVNP +H +MRHLFGTWSTVFP SVL+KIE +L FSQ  N+Q S 
Sbjct: 98   YFSSRLPEVFCEAYRQVNPNLHPAMRHLFGTWSTVFPPSVLRKIEMQLQFSQTGNQQSSG 157

Query: 2544 VNSPRASVSPRPTHGIHVNPKYIRQLEH-SNPDSNIQQVRGTSSNMKVYGQKPSIGYDGF 2368
            V S ++S SPRPTHGIHVNPKY+RQ E  S  DSN Q VRG S+  K+YGQK +I YD F
Sbjct: 158  VTSLQSSESPRPTHGIHVNPKYLRQFEQQSGADSNTQHVRGMSAGQKLYGQKHTITYDEF 217

Query: 2367 DFNHSEVSSSQVGGQRLNPAGGVVRASSSLGANKLHPTSTSRLGRPFSPLGIGS------ 2206
            D +H+EV SS VG QRL+  G V   S ++GANK   +S SR+ RPFSP  IGS      
Sbjct: 218  DSDHTEVPSSHVGVQRLSSTGNVGCTSLAIGANKSQLSSASRVSRPFSPSRIGSDRLLSS 277

Query: 2205 EVDEFAVENSPRRL-EGASPARP-VFDFGLSRAISRNEDMSEWRNP-------NRIETTS 2053
            EVD+   ++SPRR  E ASP+RP VFDFG  R   R+E+  EW          N  E + 
Sbjct: 278  EVDDLPSDDSPRRFAEVASPSRPPVFDFGRGRGTIRDEETREWPRKHFYGDYRNCSEGSL 337

Query: 2052 IAYNLSNGDEHQGHRALIDAYGSDRRT--SDNKPSQVGCLGRNGMGNKVASRSWQNTEEE 1879
             +Y LSNG+E Q  RALIDAYG+DR    S++KP QV  L  NGMGNKV  RSWQNTEEE
Sbjct: 338  NSYKLSNGNERQTLRALIDAYGNDRGQGMSNSKPVQVERLDVNGMGNKVTPRSWQNTEEE 397

Query: 1878 EYDWEDMSPTLVDRGKKNDFFPSSVPPHGSIKARYDLSKLAASSFESDIRSNHXXXXXXX 1699
            E+DWEDMSPTL DR + N+F  SSV   GSI AR      A        RSN        
Sbjct: 398  EFDWEDMSPTLADR-RSNEFSVSSVATFGSIGARP-----AGLESNRSSRSNQTQLAL-- 449

Query: 1698 XLDDPSITVEDSVP-VGSGRGTGKLSGFQSEPNINLGYQNLPHHFLRSSHHLNGSGRGRD 1522
              D+ S   ED+VP + SG G  ++      P       +  + F +SSH L+  GRGRD
Sbjct: 450  --DESSTIPEDAVPSLSSGHGLNQIQ----RPRYPQDAWSNSYPFSQSSHQLHAKGRGRD 503

Query: 1521 SQIPFPGSGVPSMGVVDKAAPFIDKFVDADAQLVRPPAVVSRMGPSGPDXXXXXXXXXXX 1342
              IPF  SG+ S+G  +K  P I+K  +  +Q VRPPA+V R G S  D           
Sbjct: 504  FWIPFSASGISSLGG-EKNVPLIEKLPEGGSQFVRPPALVPRSGSSSLDTVTVVTQPAML 562

Query: 1341 XXXXXXXAPINLHKPHLPPMQPDYLQQKRTRTQFDSINVAGNVLNQGPSKSLYNPE---- 1174
                    P+N+ K   P    +Y  Q+  R+ FDS+N     +NQG +K  Y PE    
Sbjct: 563  PLTAGAWPPVNVPKSQPPNAHTNYSLQQHGRSHFDSLNPINAAMNQGQNKHPYMPEQFDN 622

Query: 1173 --SKELILMKPLQPRDQHATPNQQNQG----QAQFLSQEARNNFLPSIAASVPPHLLAPP 1012
              SKE  L    Q   Q     Q+N      Q  F   +AR++FL S    +PP LLAP 
Sbjct: 623  FESKEQSLKTVPQLPGQRPALQQRNSLHGSLQPHFPPNDARDSFLSSATGPLPPRLLAPS 682

Query: 1011 WNHGCTQQGHNAVTGMVPSNPVPAVQLPLPFQSIPNSSXXXXXXXXXXXXXXXXPASSQM 832
             NHG + Q H A   MVPSNP+P  Q PL   ++P  S                P +SQM
Sbjct: 683  MNHGYSPQMHGAGISMVPSNPIPVAQPPLSIPNMPTGSLHLQGGAMPPLPPGPRP-TSQM 741

Query: 831  IPGAQSSGLVVPNQQPGHAFSGLINSLMAQGLISLTKETPVQDSVGLEFNGDLHKMRHEC 652
            +P AQ++G ++PNQ  G  F+GLI+SLMAQGLISLTK TP+QDSVGLEF+ DL K+RHE 
Sbjct: 742  MPAAQNAGPLLPNQPQGGPFTGLISSLMAQGLISLTKPTPIQDSVGLEFDADLLKVRHES 801

Query: 651  AITILYANLPRQCTTCGLRFKCQEEHSSHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 472
            AI+ LYA+LPRQCTTCGLRFK QEEHS+HMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS
Sbjct: 802  AISALYADLPRQCTTCGLRFKFQEEHSTHMDWHVTRNRMSKNRKQKPSRKWFVSASMWLS 861

Query: 471  GTEALGTDAVPGFLPAEPILEKKDDEEMAVPADEDQNACALCGEPFDDFYSDETEEWMYK 292
            G EALGTDAVPGFLP E I+EKKDDEE+AVPADEDQN CALCGEPFDDFYSDETEEWMY+
Sbjct: 862  GAEALGTDAVPGFLPTEDIVEKKDDEELAVPADEDQNLCALCGEPFDDFYSDETEEWMYR 921

Query: 291  GAVYMNATNGSTSGMDRSQLGPIVHAKCRSESTVIPSEDFRHNEGGSSEDGSRRKRLRS 115
            GAVYMNA NGS  G+DRSQLGPIVHAKCRSES+V+P EDF   +GG+ ED S+RKRLRS
Sbjct: 922  GAVYMNAPNGSVEGIDRSQLGPIVHAKCRSESSVVPPEDFVRYDGGNPEDSSQRKRLRS 980