BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006378
         (2658 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...  1357   0.0  
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...  1355   0.0  
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr...  1204   0.0  
gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arbo...  1154   0.0  
ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypi...  1142   0.0  
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro...  1141   0.0  
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...  1128   0.0  
gb|KHG00901.1| DNA topoisomerase 1 -like protein [Gossypium arbo...  1123   0.0  
ref|XP_011047542.1| PREDICTED: DNA topoisomerase 1-like [Populus...  1118   0.0  
ref|XP_012434356.1| PREDICTED: DNA topoisomerase 1-like isoform ...  1116   0.0  
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr...  1115   0.0  
ref|XP_011007608.1| PREDICTED: DNA topoisomerase 1-like [Populus...  1114   0.0  
ref|XP_008449103.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...  1108   0.0  
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ...  1104   0.0  
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...  1098   0.0  
ref|XP_012070937.1| PREDICTED: DNA topoisomerase 1 [Jatropha cur...  1085   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]              1072   0.0  
ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum...  1061   0.0  
ref|XP_010545254.1| PREDICTED: DNA topoisomerase 1 [Tarenaya has...  1055   0.0  
gb|KHN46493.1| DNA topoisomerase 1 [Glycine soja] gi|947075126|g...  1052   0.0  

>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score = 1357 bits (3513), Expect = 0.0
 Identities = 681/797 (85%), Positives = 710/797 (89%), Gaps = 1/797 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            V+  VANSKESSPLD +LKQSPQ NAL  VK+EEIKDGN LKSDD DSEDDKPLS+RLKG
Sbjct: 106  VKSPVANSKESSPLDDRLKQSPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKG 165

Query: 2428 NTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFSKSNAGTSGAKHIDYDEKKP 2249
            N+   NQG+GAS ADAAIS+VN+KTDPEDSDDEVPLSSRF KSNAGTSGAK ID DEKKP
Sbjct: 166  NSKNVNQGIGASKADAAISEVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKP 225

Query: 2248 LVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVKS 2069
            L SKVQQNGSTSRE Q KSS +PVKRPL KASSSG SS KKP+VSDTSKEVKVKQ+TVK 
Sbjct: 226  LASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKV 285

Query: 2068 EAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSKS 1889
            E K D+DDHIPI+QRMK  APS   SVT                          SQYSKS
Sbjct: 286  EKKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSKS 345

Query: 1888 TKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVMLE 1709
            TKMLPGSGDGQKKWTTLVHNGVIFPPPY PHGV MLYKGKE NLTPEQEEVATMFAVML+
Sbjct: 346  TKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLD 405

Query: 1708 TDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXXX 1529
            TDYMQKPKFRENFWNDWRKLLGKNHVIQNLE CDFKPIYDWHQEQK+KKKQMSS      
Sbjct: 406  TDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKAL 465

Query: 1528 XXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIG 1349
                     KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINIG
Sbjct: 466  KEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIG 525

Query: 1348 KDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE 1169
            KD PIPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE
Sbjct: 526  KDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE 585

Query: 1168 KARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 989
            KARKLKDYIHSIRAAYTKDFVS+D TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT
Sbjct: 586  KARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 645

Query: 988  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLDTA 809
            LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVYKAIGQFQTGKKQNDDLFDKLDTA
Sbjct: 646  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTA 705

Query: 808  KLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIICNH 629
            KLN HLKELMPGLTAKVFRTYNASITLD MLN+GT D +VA KI+VYQ ANKEVAIICNH
Sbjct: 706  KLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNH 765

Query: 628  QRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPL-KDSDGKRKRNLTPEAL 452
            QRTVSK+H+AQMSRLTEKIE+L+GVLKDL+VDLDRAKKGKPPL KDSDGKRKRNL PEAL
Sbjct: 766  QRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEAL 825

Query: 451  ERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 272
            ERK+AQTNAKIEKMERDMK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS
Sbjct: 826  ERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 885

Query: 271  LIAKFAWSMDVDPEFRF 221
            L+AKFAW+MDVDPEFRF
Sbjct: 886  LLAKFAWAMDVDPEFRF 902


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score = 1355 bits (3508), Expect = 0.0
 Identities = 680/797 (85%), Positives = 709/797 (88%), Gaps = 1/797 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            V+  VANSKESSPLD +LKQ PQ NAL  VK+EEIKDGN LKSDD DSEDDKPLS+RLKG
Sbjct: 106  VKSPVANSKESSPLDDRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKG 165

Query: 2428 NTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFSKSNAGTSGAKHIDYDEKKP 2249
            NT   NQG+GAS ADAAIS+VN+KTDPEDSDDEVPLSSRF KSNAGTSGAK ID DEKKP
Sbjct: 166  NTKNVNQGIGASKADAAISEVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKP 225

Query: 2248 LVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVKS 2069
            L SKVQQNGSTSRE Q KSS +PVKRPL KASSSG SS KKP+VSDTSKEVKVKQ+TVK 
Sbjct: 226  LASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKV 285

Query: 2068 EAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSKS 1889
            E K D+DDHIPI+QRMK  APS   SVT                          SQYSKS
Sbjct: 286  EKKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKS 345

Query: 1888 TKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVMLE 1709
            TKMLPGSGDGQKKWTTLVHNGVIFPPPY PHGV MLYKGKE NLTPEQEEVATMFAVML+
Sbjct: 346  TKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLD 405

Query: 1708 TDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXXX 1529
            TDYMQKPKFRENFWNDWRKLLGKNHVIQNLE CDFKPIYDWHQEQK+KKKQMSS      
Sbjct: 406  TDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKAL 465

Query: 1528 XXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIG 1349
                     KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINIG
Sbjct: 466  KEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIG 525

Query: 1348 KDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE 1169
            KD PIPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYE
Sbjct: 526  KDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYE 585

Query: 1168 KARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 989
            KARKLKDYIHSIRAAYTKDFVS+D TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT
Sbjct: 586  KARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 645

Query: 988  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLDTA 809
            LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVYKAIGQFQTGKKQNDDLFDKLDTA
Sbjct: 646  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTA 705

Query: 808  KLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIICNH 629
            KLN HLKELMPGLTAKVFRTYNASITLD MLN+GT D +VA KI+VYQ ANKEVAIICNH
Sbjct: 706  KLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNH 765

Query: 628  QRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPL-KDSDGKRKRNLTPEAL 452
            QRTVSK+H+AQMSRLTEKIE+L+GVLKDL+VDLDRAKKGKPPL KDSDGKRKRNL PEAL
Sbjct: 766  QRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEAL 825

Query: 451  ERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 272
            ERK+AQTNAKIEKMERDMK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS
Sbjct: 826  ERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 885

Query: 271  LIAKFAWSMDVDPEFRF 221
            L+AKFAW+MDVDPEFRF
Sbjct: 886  LLAKFAWAMDVDPEFRF 902


>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|557555706|gb|ESR65720.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 824

 Score = 1204 bits (3115), Expect = 0.0
 Identities = 606/719 (84%), Positives = 631/719 (87%), Gaps = 1/719 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            V+  VANSKESSPLD +LKQ PQ NAL  VK+EEIKDGN LKSDD DSEDDKPLS+RLKG
Sbjct: 106  VKSPVANSKESSPLDDRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLKG 165

Query: 2428 NTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFSKSNAGTSGAKHIDYDEKKP 2249
            NT   NQG+GAS ADAAIS+VN+KTDPEDSDDEVPLSSRF KSNAGTSGAK ID DEKKP
Sbjct: 166  NTKNVNQGIGASKADAAISEVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKKP 225

Query: 2248 LVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVKS 2069
            L SKVQQNGSTSRE Q KSS +PVKRPL KASSSG SS KKP+VSDTSKEVKVKQ+TVK 
Sbjct: 226  LASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVKV 285

Query: 2068 EAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSKS 1889
            E K D+DDHIPI+QRMK  APS   SVT                          SQYSKS
Sbjct: 286  EKKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSKS 345

Query: 1888 TKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVMLE 1709
            TKMLPGSGDGQKKWTTLVHNGVIFPPPY PHGV MLYKGKE NLTPEQEEVATMFAVML+
Sbjct: 346  TKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVMLD 405

Query: 1708 TDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXXX 1529
            TDYMQKPKFRENFWNDWRKLLGKNHVIQNLE CDFKPIYDWHQEQK+KKKQMSS      
Sbjct: 406  TDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKAL 465

Query: 1528 XXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIG 1349
                     KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINIG
Sbjct: 466  KEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINIG 525

Query: 1348 KDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE 1169
            KD PIPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKYE
Sbjct: 526  KDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKYE 585

Query: 1168 KARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 989
            KARKLKDYIHSIRAAYTKDFVS+D TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT
Sbjct: 586  KARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 645

Query: 988  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLDTA 809
            LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVYKAIGQFQTGKKQNDDLFDKLDTA
Sbjct: 646  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTA 705

Query: 808  KLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIICNH 629
            KLN HLKELMPGLTAKVFRTYNASITLD MLN+GT D +VA KI+VYQ ANKEVAIICNH
Sbjct: 706  KLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICNH 765

Query: 628  QRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPL-KDSDGKRKRNLTPEA 455
            QRTVSK+H+AQMSRLTEKIE+L+GVLKDL+VDLDRAKKGKPPL KDSDGKRKRNL PEA
Sbjct: 766  QRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEA 824


>gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
          Length = 903

 Score = 1154 bits (2984), Expect = 0.0
 Identities = 575/802 (71%), Positives = 658/802 (82%), Gaps = 6/802 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEE--IKDGNSLKSDDGDSEDDKPLSSRL 2435
            VR  V +SK S+  + Q KQ+ +QN   AVKEE+  IK  +   SDD D +D KPLS+RL
Sbjct: 103  VRSPVVSSKASTSFNDQSKQASKQNKFTAVKEEKSPIKRTDETNSDDDDDDDSKPLSARL 162

Query: 2434 KGNTNKANQGLGASN---ADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHID 2267
            KG +++ N+G+  S    +   + K+ +K   ED DD+ PLS+RFS KSN GTS +K   
Sbjct: 163  KGISSQGNKGVSTSTPAQSQRFVPKIEVKGSAEDPDDDAPLSARFSTKSNTGTSSSKPYG 222

Query: 2266 YDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVK 2087
              EKKPL SK+QQNGS  + KQ KSS +  KRPLDK +SS  S  KKP++SDT   +K K
Sbjct: 223  SHEKKPLASKIQQNGSIMKVKQQKSSMLSDKRPLDKGNSSDQSYAKKPKISDTPTMMKTK 282

Query: 2086 QITVKSEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1907
            Q+TVK+E K D DDHIPI+QR+KK   S + + +                          
Sbjct: 283  QVTVKAE-KDDEDDHIPISQRIKKSVSSVSKASSVKQKATKVVSSSFKKINKKSKKDMKK 341

Query: 1906 SQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATM 1727
            S+YSKSTK+ P SGDGQKKW+TLVHNGVIFPPPY PHGV MLY G+  +LTPEQEEVATM
Sbjct: 342  SKYSKSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGRPVDLTPEQEEVATM 401

Query: 1726 FAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSS 1547
            FAVM ETDYM KP+F++NFW DW KLLG+NHVI++L+ CDF PIY+WH ++K+KKKQMSS
Sbjct: 402  FAVMQETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMSS 461

Query: 1546 XXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1367
                           KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP D
Sbjct: 462  EEKKALKEEKLMQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCD 521

Query: 1366 ITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1187
            ITINIGKDAPIPECPIPGERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS
Sbjct: 522  ITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 581

Query: 1186 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEAD 1007
            DKEKYEKAR LKDYI +IRAAYTKDF +KD T+RQIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 582  DKEKYEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 641

Query: 1006 TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLF 827
            TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVYKAIGQFQTGK ++DDLF
Sbjct: 642  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLF 701

Query: 826  DKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEV 647
            D+LDT+KLN HLKELMPGLTAKVFRT+NASITLDDMLN+ T+D +VAEK+ +YQ ANKEV
Sbjct: 702  DELDTSKLNAHLKELMPGLTAKVFRTFNASITLDDMLNKETKDGDVAEKVVIYQRANKEV 761

Query: 646  AIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNL 467
            AIICNHQR++SKSH+AQMSRLTEKI EL+G++K+LK DLDRAKKGKPPLKD+DGK+KRNL
Sbjct: 762  AIICNHQRSISKSHSAQMSRLTEKINELKGLVKELKTDLDRAKKGKPPLKDADGKQKRNL 821

Query: 466  TPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 287
            TPEA+E+KIAQTN KIEKMERDM++KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 822  TPEAIEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 881

Query: 286  IFNKSLIAKFAWSMDVDPEFRF 221
            IFNKSL+AKFAW+MDVDP+FRF
Sbjct: 882  IFNKSLLAKFAWAMDVDPDFRF 903


>ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypium raimondii]
            gi|823222380|ref|XP_012443904.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222382|ref|XP_012443905.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222384|ref|XP_012443906.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222386|ref|XP_012443907.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222388|ref|XP_012443908.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222390|ref|XP_012443909.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222392|ref|XP_012443910.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|763795950|gb|KJB62946.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
            gi|763795951|gb|KJB62947.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
            gi|763795953|gb|KJB62949.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
          Length = 901

 Score = 1142 bits (2955), Expect = 0.0
 Identities = 576/802 (71%), Positives = 656/802 (81%), Gaps = 6/802 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEE--IKDGNSLKSDDGDSEDDKPLSSRL 2435
            VR  V +SK S+ L  Q KQ+ +QN   AVKEE+  IK  +   SD+ D +D KPLS+RL
Sbjct: 103  VRSPVVSSKASTSLSDQSKQALKQNKFTAVKEEKRLIKCTDETNSDE-DDDDSKPLSARL 161

Query: 2434 KGNTNKANQGLGASN---ADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHID 2267
            KG +++ N+G+  S    +   + K+ +K   ED DD+ PLS+RFS KSN GTS +K   
Sbjct: 162  KGISSQGNKGVSTSTPAQSQRLVPKIEVKGSAEDPDDDAPLSARFSMKSNTGTSSSKPYG 221

Query: 2266 YDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVK 2087
              EKKPL SK+QQNGS  ++KQ K S +  KRPLDK +SS  S  KKP++SDT   +K K
Sbjct: 222  SHEKKPLPSKIQQNGSIMKDKQQKCSVLSDKRPLDKGNSSDQSYAKKPKISDTPTTMKTK 281

Query: 2086 QITVKSEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1907
            Q+TVK+E K D DDHIPI+QR+KK   S + + +                          
Sbjct: 282  QVTVKAE-KDDEDDHIPISQRIKKSVSSVSKT-SSVKQKATKVVSSSFKKINKSKKDMKK 339

Query: 1906 SQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATM 1727
            S+YSKSTK+ P SGDGQKKW+TLVHNGVIFPPPY PHGV MLY G+  +LTPEQEEVATM
Sbjct: 340  SKYSKSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGQPVDLTPEQEEVATM 399

Query: 1726 FAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSS 1547
            FAVM ETDYM KP+F++NFW DW KLLG+NHVI++L+ CDF PIY+WH ++K+KKKQMSS
Sbjct: 400  FAVMQETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMSS 459

Query: 1546 XXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1367
                           KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP D
Sbjct: 460  EEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPCD 519

Query: 1366 ITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1187
            ITINIGKDAPIPECPIPGERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS
Sbjct: 520  ITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 579

Query: 1186 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEAD 1007
            DKEKYEKAR LKDYI +IRAAYTKDF +KD T+RQIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 580  DKEKYEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEAD 639

Query: 1006 TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLF 827
            TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVYKAIGQFQT K ++DDLF
Sbjct: 640  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTRKSKSDDLF 699

Query: 826  DKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEV 647
            D+LDT+KLN HLKELMPGLTAKVFRTYNASITLDDMLN+ T D +VAEK+ +YQ ANKEV
Sbjct: 700  DELDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNQETEDGDVAEKVVIYQRANKEV 759

Query: 646  AIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNL 467
            AIICNHQR++SKSH+AQMSRLTEKI EL+GVLK+LK DLDRAKKGKPPLKD+DGK+KRNL
Sbjct: 760  AIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKTDLDRAKKGKPPLKDADGKQKRNL 819

Query: 466  TPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 287
            TPEA+E+KIAQTN KIEKMERDM++KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 820  TPEAIEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 879

Query: 286  IFNKSLIAKFAWSMDVDPEFRF 221
            IFNKSL+AKFAW+MDVDP+FRF
Sbjct: 880  IFNKSLLAKFAWAMDVDPDFRF 901


>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
            alpha isoform 1 [Theobroma cacao]
            gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
            DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score = 1141 bits (2951), Expect = 0.0
 Identities = 571/802 (71%), Positives = 649/802 (80%), Gaps = 6/802 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKE--EEIKDGNSLKSDDGDSEDDKPLSSRL 2435
            V+  V N K S+ L+ Q KQ+ +QN   AVKE    IK      SDD D +D  PLS+RL
Sbjct: 103  VKSPVVNFKASTSLNDQSKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSARL 162

Query: 2434 KGNTNKANQGLGAS---NADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHID 2267
            KG +N+ N+G   S    +   + K  +K   ED DDE PLS+RF+ KSN GTS ++  D
Sbjct: 163  KGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLHD 222

Query: 2266 YDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVK 2087
             DEKKPL SK+QQNGS  + KQ  SS +  KRPLDK +SS  SS KKP+ SD    +K K
Sbjct: 223  CDEKKPLASKIQQNGSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKTK 282

Query: 2086 QITVKSEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1907
            Q+TVK+E   ++DDH+PIAQRMKK   S +   +                          
Sbjct: 283  QVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMKS 342

Query: 1906 SQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATM 1727
            S+Y KSTK+ P SGDGQKKW+TLVHNGVIFP PYTPHGV MLY G+  +LTPEQEEVATM
Sbjct: 343  SKYIKSTKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVATM 402

Query: 1726 FAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSS 1547
            FAVM +TDYM K +F++NFW DW KLLGKNH I++L+ CDF PIY+WH ++K+KKKQMSS
Sbjct: 403  FAVMKDTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMSS 462

Query: 1546 XXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1367
                           K+MWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSD
Sbjct: 463  EEKKALKEEKLKQEEKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSD 522

Query: 1366 ITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1187
            ITINIGKDAPIPECPIPGERWK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS
Sbjct: 523  ITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 582

Query: 1186 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEAD 1007
            DKEKYEKAR LKDYI +IRAAYTKDF +KD  +RQIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 583  DKEKYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEAD 642

Query: 1006 TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLF 827
            TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVYKAIGQFQTGK ++DDLF
Sbjct: 643  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDLF 702

Query: 826  DKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEV 647
            DKLDT+KLN HLKELMPGLTAKVFRTYNASITLD+MLN+ T+D +VAEK+ VYQ ANKEV
Sbjct: 703  DKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKEV 762

Query: 646  AIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNL 467
            AIICNHQR++SKSH+AQMSRLTEKI EL+GVLK+LK+DLDRAKKGKPPLKD+DGK+KRNL
Sbjct: 763  AIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNL 822

Query: 466  TPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 287
            TP+A+++KI QTNAKIEKMERDM++KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 823  TPQAIQKKIDQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 882

Query: 286  IFNKSLIAKFAWSMDVDPEFRF 221
            IFNKSL+AKFAW+MDVDP+FRF
Sbjct: 883  IFNKSLLAKFAWAMDVDPDFRF 904


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222847602|gb|EEE85149.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 877

 Score = 1128 bits (2917), Expect = 0.0
 Identities = 578/807 (71%), Positives = 639/807 (79%), Gaps = 16/807 (1%)
 Frame = -3

Query: 2593 ANSKESSPL-------------DGQLKQSPQQNALVAVKEEEIKDGNSLKS--DDGDSED 2459
            A+S ++SPL             + QLKQ+ +Q    AVKEE        KS  DD DSED
Sbjct: 87   ASSAKASPLKSPLTYTRALTSSNDQLKQASKQVVSNAVKEET-------KSIVDDEDSED 139

Query: 2458 DKPLSSRLKGNTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSG 2282
            DKPLSSR+KG+TN  N+G+ A          ++K +P D DDEVPLSSRF+ KSNAGTS 
Sbjct: 140  DKPLSSRIKGSTNNVNKGVTAP--------AHVKDEPSD-DDEVPLSSRFAMKSNAGTSS 190

Query: 2281 AKHIDYDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSK 2102
            +K I   E +P  SK Q NGST  +KQ KSS +P KRP+D    S  SS KKP++ D   
Sbjct: 191  SKSIRSSEIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMDNKVPSNHSSAKKPKLLDACT 250

Query: 2101 EVKVKQITVKSEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXX 1922
              KVKQ+TVK E K D+DDH+ I+QRMKK   S N S                       
Sbjct: 251  TTKVKQVTVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVTKVVSSSLKKTTQKNK 310

Query: 1921 XXXXXSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQE 1742
                 S+YSKSTK+ PGS DGQKKWTTLVHNGVIFPPPY PHGV +LYKGK  +LTPEQE
Sbjct: 311  KQMKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPIDLTPEQE 370

Query: 1741 EVATMFAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKK 1562
            EVATMFAVM +TDY+QKP+FR+NFWNDWRKLLGKNHVIQ L+DCDF PIY+WHQ++K+KK
Sbjct: 371  EVATMFAVMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKK 430

Query: 1561 KQMSSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 1382
            KQMS+               KYMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK R
Sbjct: 431  KQMSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSR 490

Query: 1381 IRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSS 1202
            IRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSS
Sbjct: 491  IRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSS 550

Query: 1201 LKGQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKD 1022
            LKGQSDKEKYEKARKLKDYIH+IRAAYTKDF SKD T+RQIAVATYLIDKLALRAGNEKD
Sbjct: 551  LKGQSDKEKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKD 610

Query: 1021 DDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQ 842
            DDEADTVGCCTLKV NVECIPPNKLKFDFLGKDSI+Y NTVEVE PVYKAIG FQ  KKQ
Sbjct: 611  DDEADTVGCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQ 670

Query: 841  NDDLFDKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQH 662
             DDLFD LDT+KLN HLKELMPGLTAKVFRTYNASITLD+ L   T D +VAEKI +Y  
Sbjct: 671  TDDLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQ 730

Query: 661  ANKEVAIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGK 482
            ANK+VAIICNHQRT+SKSH AQMSRLTEKIEEL+  LK+LK DLDRAKKGKPPLK +DGK
Sbjct: 731  ANKQVAIICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGK 790

Query: 481  RKRNLTPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHE 302
            +KR+LTPEA+E+KIA TN KIEKME  MK+KEDLKTVALGTSKINYLDPRITVAWCKRHE
Sbjct: 791  QKRSLTPEAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHE 850

Query: 301  VPIEKIFNKSLIAKFAWSMDVDPEFRF 221
            VPI+KIFNKSL+AKF W+MDVDP+FRF
Sbjct: 851  VPIDKIFNKSLLAKFTWAMDVDPQFRF 877


>gb|KHG00901.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
          Length = 903

 Score = 1123 bits (2905), Expect = 0.0
 Identities = 561/801 (70%), Positives = 651/801 (81%), Gaps = 5/801 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            V+  VAN K  + L+   KQ+ +Q+    VKEE+     + +++  D +D +PLS+RLKG
Sbjct: 103  VKSPVANFKTPASLNDHSKQALKQHKCNVVKEEKSPIKGATETNSDDDDDLQPLSARLKG 162

Query: 2428 NTNKANQGLGASNADAA---ISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHIDYD 2261
             +N+  +G   S+   +   + K  +K   +D DDE PL  RF+ KS+AGTS +K  D D
Sbjct: 163  ISNQGTKGASTSSTSQSHRLVPKTEIKGSTKDPDDEAPLPVRFNMKSSAGTSSSKLYDSD 222

Query: 2260 EKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQI 2081
            EKKPL S  +QNGST + KQ KSS +  KRPLDK +S   SS KKP++SDTS  +K KQ+
Sbjct: 223  EKKPLASNGEQNGSTVKGKQEKSSMLSGKRPLDKGNSLDQSSAKKPKISDTSTAMKSKQL 282

Query: 2080 TVKSE-AKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXS 1904
             VK+E A  D+DD IPI+QR+KK  P+ + + +                          S
Sbjct: 283  AVKAEKADEDDDDDIPISQRIKKSTPTNSKTSSMKQKAAKVVSSSLKKLNRKSKKEFKNS 342

Query: 1903 QYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMF 1724
            +Y KSTK+ P SGDGQKKW+TLVHNGVIFPPPY  HG+ +LY G+  +LTPEQEEVATMF
Sbjct: 343  KYIKSTKVSPSSGDGQKKWSTLVHNGVIFPPPYKLHGIKLLYDGRPIDLTPEQEEVATMF 402

Query: 1723 AVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSX 1544
            AVM +TDYM KP+F++NFW DW KLLGKNH I++L+ CDF PIY+WH ++K+KKKQMSS 
Sbjct: 403  AVMKDTDYMNKPQFKKNFWEDWSKLLGKNHTIKDLDKCDFTPIYEWHLQEKEKKKQMSSE 462

Query: 1543 XXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDI 1364
                          KYMWAIVDGV+EKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDI
Sbjct: 463  EKKALKEEKLKQEEKYMWAIVDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDI 522

Query: 1363 TINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1184
            TINIGK+APIPECPIPGE WK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD
Sbjct: 523  TINIGKNAPIPECPIPGESWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 582

Query: 1183 KEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADT 1004
            KEKYEKAR LK+YI +IRAAYTKDF SKD T+RQIAVATYLIDKLALRAGN+KDDDEADT
Sbjct: 583  KEKYEKARMLKEYIRNIRAAYTKDFTSKDVTKRQIAVATYLIDKLALRAGNDKDDDEADT 642

Query: 1003 VGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFD 824
            VGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVY AIGQFQTGK ++DDLFD
Sbjct: 643  VGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYNAIGQFQTGKSKSDDLFD 702

Query: 823  KLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVA 644
            KLDT+KLN HLKELMPGLTAKVFRTYNASITLD+MLN+ T+D +VAEK+ +YQ ANKEVA
Sbjct: 703  KLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVIYQRANKEVA 762

Query: 643  IICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLT 464
            IICNHQR++SKSH+AQMSRLTEKI EL+GVLK+LK+DLDRAKKGKPPLKD+DGK+KRNLT
Sbjct: 763  IICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNLT 822

Query: 463  PEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 284
            PEALE+KIAQTNAKIEKMERDM++KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI
Sbjct: 823  PEALEKKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 882

Query: 283  FNKSLIAKFAWSMDVDPEFRF 221
            FNKSL+AKFAW+MDVDP+FRF
Sbjct: 883  FNKSLLAKFAWAMDVDPDFRF 903


>ref|XP_011047542.1| PREDICTED: DNA topoisomerase 1-like [Populus euphratica]
            gi|743908190|ref|XP_011047543.1| PREDICTED: DNA
            topoisomerase 1-like [Populus euphratica]
          Length = 878

 Score = 1118 bits (2892), Expect = 0.0
 Identities = 571/805 (70%), Positives = 635/805 (78%), Gaps = 14/805 (1%)
 Frame = -3

Query: 2593 ANSKESSPL-------------DGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDK 2453
            A+S ++SPL             + QLKQ+ +Q    AVKEE          DD DSEDDK
Sbjct: 88   ASSAKASPLKSPLTYTRTLTSSNDQLKQASKQVVSNAVKEE-----TKPIVDDEDSEDDK 142

Query: 2452 PLSSRLKGNTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAK 2276
            PLSSR+KG+TN  N+G+ A          ++K  P D DDEVPLSSRF+ KS+AGTS +K
Sbjct: 143  PLSSRIKGSTNNVNKGVTAP--------AHVKDGPSD-DDEVPLSSRFAMKSSAGTSSSK 193

Query: 2275 HIDYDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEV 2096
             I   E +PL SK Q NGST  +KQ KSS +P KRP+D    S  SS KKP++ D     
Sbjct: 194  SIRSSEIRPLPSKSQLNGSTKNDKQQKSSVVPTKRPIDNNIPSNHSSAKKPKLLDACTTT 253

Query: 2095 KVKQITVKSEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXX 1916
            KVKQ+TVK E K D+DDH+ I+QRMKK   S N S                         
Sbjct: 254  KVKQVTVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVTKVVSSSLKKTTQKNNKQ 313

Query: 1915 XXXSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEV 1736
               S+YSKSTK+ PGS DGQKKWTTLVHNGVIFPPPY PHGV +LYKGK  +LTPEQEEV
Sbjct: 314  MKNSKYSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPVDLTPEQEEV 373

Query: 1735 ATMFAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQ 1556
            ATMFAVM +TDY+QKP+F +NFWNDWRKLLGKNHVIQ L+DCDF PIY+WHQ++K+KKKQ
Sbjct: 374  ATMFAVMKDTDYVQKPQFLQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKKKQ 433

Query: 1555 MSSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1376
            MS+               KYMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIR
Sbjct: 434  MSTEEKKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIR 493

Query: 1375 PSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLK 1196
            PSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLK
Sbjct: 494  PSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLK 553

Query: 1195 GQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDD 1016
            GQSDKEKYEKARKLKDYIH+IR AYTKDF SKD T+RQIAVATYLIDKLALRAGNEKDDD
Sbjct: 554  GQSDKEKYEKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDD 613

Query: 1015 EADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQND 836
            EADTVGCCTLKV NVECIPPNKLKFDFLGKDS++Y NTVEVE PVYKAIG FQ  KKQ D
Sbjct: 614  EADTVGCCTLKVANVECIPPNKLKFDFLGKDSMRYENTVEVELPVYKAIGHFQVAKKQTD 673

Query: 835  DLFDKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHAN 656
            DLFD LDT+KLN HLKELMPGLTAKVFRTYNASITLD+ L   T D +VAEKI +Y  AN
Sbjct: 674  DLFDSLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQAN 733

Query: 655  KEVAIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRK 476
            K+VAIICNHQRT+SKSH AQMSRLTEKIEEL+  LK+LK DLDRAKKG+PPLK +DGK+K
Sbjct: 734  KQVAIICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGRPPLKGADGKQK 793

Query: 475  RNLTPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 296
            R+LTPEA+E+KIA TN +IEKME  MK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVP
Sbjct: 794  RSLTPEAIEKKIATTNQRIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 853

Query: 295  IEKIFNKSLIAKFAWSMDVDPEFRF 221
            I+KIFNKSL+AKF W+MDVDP+FRF
Sbjct: 854  IDKIFNKSLLAKFTWAMDVDPQFRF 878


>ref|XP_012434356.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Gossypium raimondii]
            gi|823197693|ref|XP_012434357.1| PREDICTED: DNA
            topoisomerase 1-like isoform X1 [Gossypium raimondii]
            gi|823197696|ref|XP_012434358.1| PREDICTED: DNA
            topoisomerase 1-like isoform X1 [Gossypium raimondii]
            gi|763778431|gb|KJB45554.1| hypothetical protein
            B456_007G311800 [Gossypium raimondii]
          Length = 906

 Score = 1116 bits (2887), Expect = 0.0
 Identities = 560/803 (69%), Positives = 647/803 (80%), Gaps = 7/803 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            V+  VAN K  + L+   KQ+ +QN    V E +     + +++  D +D +PLS+RLKG
Sbjct: 104  VKSPVANFKTPASLNDHSKQALKQNNCNVVNEGKSPIKGATEANSDDDDDLQPLSARLKG 163

Query: 2428 NTNKANQGLGASNADAA---ISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHIDYD 2261
             +N+  +G   S+   +   +SK  +K   +D DDE PLS RF+ KS+AGTS +K  D D
Sbjct: 164  ISNQGTKGASTSSTAQSHRLVSKTEIKGSTKDPDDEAPLSVRFNMKSSAGTSSSKLYDSD 223

Query: 2260 EKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQI 2081
            EKKPL S  +Q  ST + KQ KSS +  KRPLDK + S  SS KKP++SDT   +K KQ+
Sbjct: 224  EKKPLASNSEQKCSTVKGKQEKSSMLSGKRPLDKGNCSDQSSAKKPKISDTPTAMKSKQL 283

Query: 2080 TVKSE---AKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXX 1910
            TVK+E   A  D+DD IPI+QR+KK  PS + + +                         
Sbjct: 284  TVKAEKEKADEDDDDDIPISQRIKKSPPSNSKTSSMKQKAAKVVSSSLKKLNKKSKKEFK 343

Query: 1909 XSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVAT 1730
             S+Y KSTK+ P SGDGQKKW+TLVHNGVIFPPPY PHG+ +LY G+  +LTPEQEEVAT
Sbjct: 344  NSKYIKSTKVSPSSGDGQKKWSTLVHNGVIFPPPYKPHGIKLLYDGRPIDLTPEQEEVAT 403

Query: 1729 MFAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMS 1550
            MFAVM +TDYM KP+F++NFW DW KLLGKNH I++L+ CDF PIY+WH ++K+KKKQMS
Sbjct: 404  MFAVMKDTDYMNKPQFKKNFWEDWSKLLGKNHTIKDLDKCDFTPIYEWHLQEKEKKKQMS 463

Query: 1549 SXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS 1370
            S               KYMWAIVD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPS
Sbjct: 464  SEEKKALKEEKLKQEEKYMWAIVDRVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPS 523

Query: 1369 DITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 1190
            DITINIGK+APIPECPIPGE WK++KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ
Sbjct: 524  DITINIGKNAPIPECPIPGESWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 583

Query: 1189 SDKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEA 1010
            SDKEKYEKAR LK+YI +IRAAYTKDF SKD T+RQIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 584  SDKEKYEKARMLKEYIKNIRAAYTKDFTSKDVTKRQIAVATYLIDKLALRAGNEKDDDEA 643

Query: 1009 DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDL 830
            DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVY AIGQF TGK ++DDL
Sbjct: 644  DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYNAIGQFHTGKSKSDDL 703

Query: 829  FDKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKE 650
            FDKLDT+KLN HLKELMPGLTAKVFRTYNASITLD+MLN+ T+D +VAEK+ +YQ ANKE
Sbjct: 704  FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVIYQRANKE 763

Query: 649  VAIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRN 470
            VAIICNHQR++SKSH+AQMSRLTEKI EL+GVLK+LK+DLDRAKKGKPPLKD+DGK+KRN
Sbjct: 764  VAIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRN 823

Query: 469  LTPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 290
            LTPE LE+KIAQTNAKIEKMERDM++KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE
Sbjct: 824  LTPEVLEKKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 883

Query: 289  KIFNKSLIAKFAWSMDVDPEFRF 221
            KIFNKSL+AKFAW+MDVDP+FRF
Sbjct: 884  KIFNKSLLAKFAWAMDVDPDFRF 906


>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222860420|gb|EEE97967.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 860

 Score = 1115 bits (2885), Expect = 0.0
 Identities = 564/792 (71%), Positives = 629/792 (79%), Gaps = 1/792 (0%)
 Frame = -3

Query: 2593 ANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKGNTNKA 2414
            A+S ++SP+   +  S   ++ +AVKEE          DD DSEDDKPLSSR KG+TN A
Sbjct: 86   ASSAKASPMKPPVTYSRVPSSSIAVKEE-----TKPIVDDDDSEDDKPLSSRFKGSTNNA 140

Query: 2413 NQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHIDYDEKKPLVSK 2237
            N+G+      A +       D    DDEVPLSSRF+ KSNAG+S  K I   EK  LVSK
Sbjct: 141  NKGV---TVPARVK------DEHSDDDEVPLSSRFAAKSNAGSSSCKTISSSEKILLVSK 191

Query: 2236 VQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVKSEAKV 2057
            +Q NGST+++KQ KSS +P KRP+D    S  S  KKP++SD S     KQ+TVK+E K 
Sbjct: 192  IQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQSFAKKPKLSDAST---TKQVTVKAELKA 248

Query: 2056 DNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSKSTKML 1877
            D+DDH+ I+QRMKK + S N S++                          S+YSKSTK+ 
Sbjct: 249  DDDDHLTISQRMKKASSSSNKSLSVKQNVTKVVSFSSKKTTKNNKKQMQNSKYSKSTKVQ 308

Query: 1876 PGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVMLETDYM 1697
            PGS DGQKKW TLVHNGVIFPPPY PHGV MLYKGK  +LTPEQEEVATMFAVM +T+Y+
Sbjct: 309  PGSSDGQKKWKTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMKDTEYV 368

Query: 1696 QKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXXXXXXX 1517
            QKP+F +NFWNDWR LLGKNHVIQ LE CDF PIY+WHQ++K+KKKQMS+          
Sbjct: 369  QKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMSTEEKKAVREEK 428

Query: 1516 XXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAP 1337
                  YMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINIGKDAP
Sbjct: 429  LKQEEMYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIGKDAP 488

Query: 1336 IPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARK 1157
            IP+CPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARK
Sbjct: 489  IPKCPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARK 548

Query: 1156 LKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVG 977
            LKDYIH+IR AYTKDF SKD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV 
Sbjct: 549  LKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVA 608

Query: 976  NVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLDTAKLNT 797
            NVECIPPNKLKFDFLGKDSI+Y NTVEVE PVYKAI QFQ  KK  DDLFD LDT+KLN 
Sbjct: 609  NVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLDTSKLNA 668

Query: 796  HLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIICNHQRTV 617
            HLKELMPGLTAKVFRTYNASITLD+ L   T D +VAEK  +Y  ANK+VAIICNHQRT+
Sbjct: 669  HLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVAIICNHQRTI 728

Query: 616  SKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLTPEALERKIA 437
            SKSH AQMSRLTEK+EEL+G LK+ K DLDRAKKGKPPLKD+DGK+KRNLTPEA+E+KIA
Sbjct: 729  SKSHDAQMSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTPEAIEKKIA 788

Query: 436  QTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKF 257
             TN KIEKME  MK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL+AKF
Sbjct: 789  TTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKF 848

Query: 256  AWSMDVDPEFRF 221
             W+MDVDP+FRF
Sbjct: 849  TWAMDVDPQFRF 860


>ref|XP_011007608.1| PREDICTED: DNA topoisomerase 1-like [Populus euphratica]
            gi|743926876|ref|XP_011007609.1| PREDICTED: DNA
            topoisomerase 1-like [Populus euphratica]
            gi|743926879|ref|XP_011007610.1| PREDICTED: DNA
            topoisomerase 1-like [Populus euphratica]
          Length = 873

 Score = 1114 bits (2881), Expect = 0.0
 Identities = 566/797 (71%), Positives = 630/797 (79%), Gaps = 1/797 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            ++P V  S+  S    Q KQ  +Q    AVKEE          DD DSEDDKPLSSR KG
Sbjct: 94   MKPPVTYSRVPSSSIDQSKQVSKQVVSNAVKEE-----TKPIVDDDDSEDDKPLSSRFKG 148

Query: 2428 NTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHIDYDEKK 2252
            +TN AN+G+      A +       D    DDEVPLSSRF+ KSNAG+S  K +   EKK
Sbjct: 149  STNNANKGV---TVPACVK------DEHSDDDEVPLSSRFAAKSNAGSSSCKTLSSSEKK 199

Query: 2251 PLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVK 2072
              VSK+Q NGST+++KQ KSS +P KRP+D    S  S  KKP++SD S     KQ+TVK
Sbjct: 200  LFVSKIQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQSFAKKPKLSDLST---TKQVTVK 256

Query: 2071 SEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSK 1892
            +E K D+DDH+ I+QRMKK + S N S++                          S+YSK
Sbjct: 257  AELKADDDDHLTISQRMKKASSSSNKSLSVKQKVTKVVSLSFKKTTKNNKKQMKNSKYSK 316

Query: 1891 STKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVML 1712
            STK+ PGS DGQKKWTTLVHNGVIFPPPY PHGV MLYKGK  +LTPEQEEVATMFAVM 
Sbjct: 317  STKLQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMK 376

Query: 1711 ETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXX 1532
            +T+Y+QKP+F +NFWNDWR LLGKNHVIQ LE CDF PIY+WHQ++K+KKKQMS+     
Sbjct: 377  DTEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMSTEEKKA 436

Query: 1531 XXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1352
                      KYMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINI
Sbjct: 437  MREEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINI 496

Query: 1351 GKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 1172
            GKDAPIP+CPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY
Sbjct: 497  GKDAPIPKCPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 556

Query: 1171 EKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 992
            EKARKLKDYIH+IR AYTKDF SKD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 557  EKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 616

Query: 991  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLDT 812
            TLKV NVECIPPNKLKFDFLGKDSI+Y NTVEVE PVYKAI QFQ  KK  DDLF+ LDT
Sbjct: 617  TLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFNSLDT 676

Query: 811  AKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIICN 632
            +KLN HLKELMPGLTAKVFRTYNASITLD+ L   T D +VAEKI +Y  ANK+VAIICN
Sbjct: 677  SKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAIICN 736

Query: 631  HQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLTPEAL 452
            HQRT+SKSH AQMSRLTEK+EEL+G LK+ K DLDRAK+GKPPLKD+DGK+KRNLTPEA+
Sbjct: 737  HQRTISKSHDAQMSRLTEKLEELKGALKEFKTDLDRAKRGKPPLKDADGKQKRNLTPEAI 796

Query: 451  ERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 272
            E+KIA TN KIEKME  MK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS
Sbjct: 797  EKKIATTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKS 856

Query: 271  LIAKFAWSMDVDPEFRF 221
            L+AKF W+MDVDP+FRF
Sbjct: 857  LLAKFTWAMDVDPQFRF 873


>ref|XP_008449103.1| PREDICTED: DNA topoisomerase 1-like [Cucumis melo]
            gi|659096453|ref|XP_008449104.1| PREDICTED: DNA
            topoisomerase 1-like [Cucumis melo]
          Length = 889

 Score = 1108 bits (2865), Expect = 0.0
 Identities = 563/798 (70%), Positives = 637/798 (79%), Gaps = 4/798 (0%)
 Frame = -3

Query: 2602 PLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKGNT 2423
            PL  +   S      +   P+     AVKEE +    S   ++ DSEDDKPLS RLKGN+
Sbjct: 99   PLTKSLGISLKASDSMDSRPKNLVNAAVKEENVSINPS--QENSDSEDDKPLSIRLKGNS 156

Query: 2422 NKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFSKSNA-GTSGAKHIDYDEKKPL 2246
            N+ N+GL ++     I K  +K    DSDDEVPLSS+F   +A G  G+K + +DEKKPL
Sbjct: 157  NQPNKGLVST-----IPKNKVKKSSGDSDDEVPLSSKFQMKHASGPMGSKQLGFDEKKPL 211

Query: 2245 VSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPS--SVKKPRVSDTSKEVKVKQITVK 2072
            V KV QNGSTSR+K  K + +  KRPL    S  PS  S KKP++SD+S  +  K +++K
Sbjct: 212  VPKVHQNGSTSRDKLQKPAVLSSKRPLPNEDSHSPSQFSTKKPKLSDSSSPLSSKLVSLK 271

Query: 2071 SEAKVDNDDH-IPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYS 1895
            ++ +VD+DD  IPI+QR+KK   + N S +                          S+Y 
Sbjct: 272  AKQEVDDDDDDIPISQRLKKTPATVNKSSSSKPTVSKVVSSSIKKTFKKSKKPVKKSKYV 331

Query: 1894 KSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVM 1715
            KSTK+LP +GDGQKKWTTLVHNGVIFPPPY  HGV MLYKGK  +LTP+QEEVATMFAVM
Sbjct: 332  KSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPQQEEVATMFAVM 391

Query: 1714 LETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXX 1535
             +TDYM KPKF+ENFWNDWRKLLGKNHVIQNL+DCDF PIYDW+Q +K+KKKQM++    
Sbjct: 392  KDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK 451

Query: 1534 XXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITIN 1355
                       KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITIN
Sbjct: 452  ALKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITIN 511

Query: 1354 IGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEK 1175
            IGK APIPECPIPGERWKEV+HDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEK
Sbjct: 512  IGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEK 571

Query: 1174 YEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGC 995
            YEKAR LKDYI +IR AYTKDF SKD TRRQIAVATYLIDKLALRAGNEKDDDEADTVGC
Sbjct: 572  YEKARVLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGC 631

Query: 994  CTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLD 815
            CTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVE PV+KAI QFQ+GK   DDLFDKLD
Sbjct: 632  CTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLD 691

Query: 814  TAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIIC 635
            T KLN HLK+LMPGLTAKVFRTYNASITLDDMLNRGT+D EV+EKI  YQHANKEVAIIC
Sbjct: 692  TNKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKDGEVSEKIVTYQHANKEVAIIC 751

Query: 634  NHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLTPEA 455
            NHQRTVSKSH AQM+RL EKI EL  +LK+LK+DLDRAKKGKPPLK SDGK+KRNLTPEA
Sbjct: 752  NHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEA 811

Query: 454  LERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 275
            LE+KI+QTNAKIEK+ERDMK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK
Sbjct: 812  LEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 871

Query: 274  SLIAKFAWSMDVDPEFRF 221
            SL+AKFAW+MDVDP+FRF
Sbjct: 872  SLLAKFAWAMDVDPDFRF 889


>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
            gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
            putative [Ricinus communis]
          Length = 891

 Score = 1104 bits (2856), Expect = 0.0
 Identities = 566/808 (70%), Positives = 632/808 (78%), Gaps = 12/808 (1%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKE----------EEIKDGNSLKSDDGDSED 2459
            +R  VANSK SS LD QLKQ+ +QNA   VK+          + +K       DD DSED
Sbjct: 95   LRSPVANSKGSSSLDEQLKQASKQNASNVVKDVSSAKPEIGLKSVKHETKSNGDDEDSED 154

Query: 2458 DKPLSSRLKGNTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSG 2282
            D PLS+R KGNTN         N    ++      D +  DD+VPL SRF  KS AGTSG
Sbjct: 155  DLPLSARRKGNTN---------NVSKVVTAPKRVKDEDSDDDKVPLCSRFPMKSTAGTSG 205

Query: 2281 AKHIDYDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSK 2102
             K  +  EKKPL SKVQQNGSTS++KQ K+  +P KRPLDKA+SS  SS+KKP++S  S 
Sbjct: 206  NKPNNISEKKPLPSKVQQNGSTSKDKQQKAPLIPTKRPLDKANSSEQSSIKKPKLSAGST 265

Query: 2101 EVKVKQITVKSEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXX 1922
              KVKQ TVK+E   D+ D IPIAQR K L  SE+   +                     
Sbjct: 266  ITKVKQATVKAEE--DDPDDIPIAQRKKSLGSSESKLSSAKQKAIKVVSSSFKKPIKKNK 323

Query: 1921 XXXXXSQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQE 1742
                 ++YSKSTK+ P S DGQKKWTTL+HNGVIFPPPY PHG+ +LYKG+  +L PEQE
Sbjct: 324  KQMKNTKYSKSTKVQPSSTDGQKKWTTLIHNGVIFPPPYKPHGIKILYKGRPVDLAPEQE 383

Query: 1741 EVATMFAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKK 1562
            EVATMFAVM +TDYMQKPKF ENFWNDWRKLLG+NHVIQ LEDCDF PIY+WH+ +K+KK
Sbjct: 384  EVATMFAVMKDTDYMQKPKFLENFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHEREKEKK 443

Query: 1561 KQMSSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKR 1382
            KQMS+               KYMWAIVDGVKEKVGNFRVEPP LFRGRGEHPKMGKLKKR
Sbjct: 444  KQMSTEEKKAQKEEKLRQEEKYMWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKKR 503

Query: 1381 IRPSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSS 1202
            I+PSDITINIGKDAPIPECPIPGE WKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSS
Sbjct: 504  IQPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSS 563

Query: 1201 LKGQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKD 1022
            LKGQSDKEKYEKARKLKDYIH+IRAAY KD  SKD T++QIAVATYLIDKLALRAGNEKD
Sbjct: 564  LKGQSDKEKYEKARKLKDYIHNIRAAYQKDLRSKDITKKQIAVATYLIDKLALRAGNEKD 623

Query: 1021 DDEADTVGCCTLKVGNVECIPPN-KLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKK 845
            DDEADTVGCCTLKV NVECIP +  LKFDFLGKDSI+Y NTVEV+  VY+AIG FQ GKK
Sbjct: 624  DDEADTVGCCTLKVANVECIPGSFNLKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGKK 683

Query: 844  QNDDLFDKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQ 665
            Q DDLFDKLDT KLN HLKELMPGLTAKVFRTYNASITLD+ L   T D +VAEK+ +YQ
Sbjct: 684  QTDDLFDKLDTTKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKVVIYQ 743

Query: 664  HANKEVAIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDG 485
             ANKEVAIICNHQRT+SKSH AQMS+L EKIEEL+  LK+LK DLDRAKKGKPPLKD+DG
Sbjct: 744  RANKEVAIICNHQRTISKSHGAQMSKLIEKIEELKATLKELKTDLDRAKKGKPPLKDADG 803

Query: 484  KRKRNLTPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRH 305
            K+KRNL+PE +E+KIA TN +IEKME +MK+KEDLKTVALGTSKINYLDPRITVAWCKRH
Sbjct: 804  KQKRNLSPENIEKKIASTNQRIEKMELNMKTKEDLKTVALGTSKINYLDPRITVAWCKRH 863

Query: 304  EVPIEKIFNKSLIAKFAWSMDVDPEFRF 221
            EVPIEKIFNKSL+AKF W+MDVDP+FRF
Sbjct: 864  EVPIEKIFNKSLLAKFTWAMDVDPQFRF 891


>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
            gi|778675953|ref|XP_011650506.1| PREDICTED: DNA
            topoisomerase 1-like [Cucumis sativus]
            gi|700200935|gb|KGN56068.1| hypothetical protein
            Csa_3G063680 [Cucumis sativus]
          Length = 889

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 558/798 (69%), Positives = 634/798 (79%), Gaps = 4/798 (0%)
 Frame = -3

Query: 2602 PLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKGNT 2423
            PL  +   S      +   P+      VKEE +    S   ++ DSEDDKPLS RLKGN 
Sbjct: 99   PLTKSLGTSLKASHSMDSRPKSLVNAVVKEENVSINPS--QENSDSEDDKPLSIRLKGNP 156

Query: 2422 NKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFSKSNA-GTSGAKHIDYDEKKPL 2246
            N+ N+GL ++     + K  +K    DSDDEVPLSS+F   +A G  G+K   +DEKKPL
Sbjct: 157  NQPNKGLVST-----VPKNKVKKSLADSDDEVPLSSKFQMKHASGVLGSKQHGFDEKKPL 211

Query: 2245 VSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSS--VKKPRVSDTSKEVKVKQITVK 2072
            V KV QNGSTSR+K  K + +  KRPL    S  PS    KKP+++D+S  +  K +++K
Sbjct: 212  VPKVHQNGSTSRDKLQKPAVLSSKRPLPNEDSHSPSQFPTKKPKLTDSSSPLNSKLVSLK 271

Query: 2071 SEAKVDNDDH-IPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYS 1895
            ++ +VD+DD  IPI+QRMKK++ + N S +                          S+Y 
Sbjct: 272  AKQEVDDDDDDIPISQRMKKVSATVNKSSSSKPTISKVVSSSIKKTFKKSKKPVKKSKYV 331

Query: 1894 KSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVM 1715
            KSTK+LP +GDGQKKWTTLVHNGVIFPPPY  HGV MLYKGK  +LTP QEEVATMFAVM
Sbjct: 332  KSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPPQEEVATMFAVM 391

Query: 1714 LETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXX 1535
             +TDYM KPKF+ENFWNDWRKLLGKNHVIQNL+DCDF PIYDW+Q +K+KKKQM++    
Sbjct: 392  KDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKK 451

Query: 1534 XXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITIN 1355
                       KYMWAI+DGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RI PSDITIN
Sbjct: 452  AVKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRICPSDITIN 511

Query: 1354 IGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEK 1175
            IGK APIPECPIPGERWKEV+HDNTVTWLAFWNDPIN KEFKYVFLAASSSLKGQSDKEK
Sbjct: 512  IGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEK 571

Query: 1174 YEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGC 995
            YEKAR LKDYI +IR AYTKDF SKD TRRQIAVATYLIDKLALRAGNEKDDDEADTVGC
Sbjct: 572  YEKARMLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGC 631

Query: 994  CTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLD 815
            CTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVE PV+KAI QFQ+GK   DDLFDKLD
Sbjct: 632  CTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLD 691

Query: 814  TAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIIC 635
            T+KLN HLK+LMPGLTAKVFRTYNASITLDDMLNRGT++ EV+EKI  YQHANKEVAIIC
Sbjct: 692  TSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKNGEVSEKIVTYQHANKEVAIIC 751

Query: 634  NHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLTPEA 455
            NHQRTVSKSH AQM+RL EKI EL  +LK+LK+DLDRAKKGKPPLK SDGK+KRNLTPEA
Sbjct: 752  NHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEA 811

Query: 454  LERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 275
            LE+KI+QTNAKIEK+ERDMK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK
Sbjct: 812  LEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 871

Query: 274  SLIAKFAWSMDVDPEFRF 221
            SL+AKFAW+MDVDP+FRF
Sbjct: 872  SLLAKFAWAMDVDPDFRF 889


>ref|XP_012070937.1| PREDICTED: DNA topoisomerase 1 [Jatropha curcas]
            gi|802588530|ref|XP_012070938.1| PREDICTED: DNA
            topoisomerase 1 [Jatropha curcas]
          Length = 877

 Score = 1085 bits (2807), Expect = 0.0
 Identities = 549/799 (68%), Positives = 630/799 (78%), Gaps = 3/799 (0%)
 Frame = -3

Query: 2608 VRPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKG 2429
            V+  VAN K SS    QLKQ+ +QN    VK+E     +  + +  DSEDD PLSS+LKG
Sbjct: 95   VKSPVANLKASSFSGEQLKQTSKQNVANVVKQEVSTVKHKTEPNSEDSEDDLPLSSKLKG 154

Query: 2428 NTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRF-SKSNAGTSGAKHIDYDEKK 2252
            N+N   +     N D+           +D DD +PLSSRF +KSNAGTSG+K  ++ EKK
Sbjct: 155  NSNNVKE---VKNEDS-----------DDDDDNIPLSSRFPAKSNAGTSGSKPNNFSEKK 200

Query: 2251 PLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVK 2072
            PL SK+QQNGS +++KQ K S +P KRP+DKA+SS  SS KKP++SD S  +K+KQ+TVK
Sbjct: 201  PLASKIQQNGSITKDKQQKMSMVPSKRPMDKANSSDQSSAKKPKISDASTAMKIKQVTVK 260

Query: 2071 SEAKVDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSK 1892
            +E   D +D++PI+ R+KK    ++  ++                          ++YSK
Sbjct: 261  AEE--DGNDNVPISLRLKKSGSLDSKLLSAKQKTTKVVSSSFKKTNKKNKKQMKNTKYSK 318

Query: 1891 STKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVML 1712
            STK+ P S DGQKKWTTLVHNGVIFPPPY PHG+ + YKG+  +LTPEQEEVATMFAVM 
Sbjct: 319  STKVQPNSTDGQKKWTTLVHNGVIFPPPYKPHGIKIRYKGQPVDLTPEQEEVATMFAVMK 378

Query: 1711 ETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXX 1532
            +TDYMQKPKF ENFWNDWRKLLGKNH+IQ LEDCDF PIY WHQ++K+KKKQMS+     
Sbjct: 379  DTDYMQKPKFLENFWNDWRKLLGKNHIIQKLEDCDFTPIYQWHQQEKEKKKQMSTEEKKA 438

Query: 1531 XXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1352
                      KYMWA+VDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINI
Sbjct: 439  LKEDKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPSDITINI 498

Query: 1351 GKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 1172
            GKDAPIPECPIPGE WKE+KHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD+EKY
Sbjct: 499  GKDAPIPECPIPGESWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKY 558

Query: 1171 EKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 992
            EKAR LK++I +IRAAY KDF SKD T++QIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 559  EKARMLKNFIDNIRAAYQKDFKSKDVTKKQIAVATYLIDKLALRAGNEKDDDEADTVGCC 618

Query: 991  TLKVGNVECIPPN-KLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLD 815
            TLKV NVECIP +  LKFDFLGKDSI+Y NTVEV+  VY AIG FQ GKKQ DDLFDKLD
Sbjct: 619  TLKVANVECIPGSYNLKFDFLGKDSIRYENTVEVKPEVYDAIGTFQKGKKQTDDLFDKLD 678

Query: 814  TAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRD-AEVAEKIEVYQHANKEVAII 638
            T KLN HLKELMPGLTAKVFRTYNASITLD  L   T D  ++AEK+ +Y  ANKEVAII
Sbjct: 679  TTKLNAHLKELMPGLTAKVFRTYNASITLDGKLYEETEDGGDLAEKVIIYNRANKEVAII 738

Query: 637  CNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLTPE 458
            CNHQRT+SKSH AQMS+LTEKIEEL+  +K+LK DLDRAKKGKPPLK  DGK+KRNL+P+
Sbjct: 739  CNHQRTISKSHDAQMSKLTEKIEELKSTIKELKTDLDRAKKGKPPLKGPDGKQKRNLSPD 798

Query: 457  ALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 278
            A+E+KIA TN KIEKME  MK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN
Sbjct: 799  AIEKKIASTNQKIEKMELAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFN 858

Query: 277  KSLIAKFAWSMDVDPEFRF 221
            KSL+AKF W+MDVDP+FRF
Sbjct: 859  KSLLAKFTWAMDVDPQFRF 877


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score = 1072 bits (2772), Expect = 0.0
 Identities = 559/801 (69%), Positives = 629/801 (78%), Gaps = 9/801 (1%)
 Frame = -3

Query: 2596 VANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRL-----K 2432
            VAN K SS  D + K S +QN +  VKEE+ +  N      GDSED+KPLS+RL     K
Sbjct: 98   VANPKVSSSSDDRSKHSSKQNTINVVKEEK-ELVNPAAEPYGDSEDEKPLSARLFTGLTK 156

Query: 2431 GNTNKANQGL-GASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHIDYDE 2258
            G++N AN+GL  +S A   + K  +    +DSDDE+PLSS+F  K+NAGTS  K  + D+
Sbjct: 157  GSSNNANKGLINSSPASLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESDD 216

Query: 2257 KKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQIT 2078
             K LVS  QQNGS +R    KSS    KRPL +  SS  SSVKKP++SD S  V  KQ +
Sbjct: 217  NKTLVSNFQQNGSINRGS--KSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQAS 274

Query: 2077 VKSEAKVDN--DDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXS 1904
             K+E K D+  DDH+PI+QRMKK A S N S T                          S
Sbjct: 275  KKAEPKADDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKKS 334

Query: 1903 QYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMF 1724
            +YSKS+K+ P SG+G KKW TLVHNGVIFPPPY PHGV MLYKGK  +LTPEQEEVATMF
Sbjct: 335  KYSKSSKVPPSSGEG-KKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMF 393

Query: 1723 AVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSX 1544
            AVML+TDYM K KF+ENF +DWRK+LGKNHVIQNLEDCDF PIY+WHQ +K+KKK+M++ 
Sbjct: 394  AVMLDTDYMTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTAE 453

Query: 1543 XXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDI 1364
                          KYMWAIV+GVKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSDI
Sbjct: 454  EKKVLKEERLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSDI 513

Query: 1363 TINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSD 1184
            TINIGKDAPIPECPIPGE WKE++HDNTVTWLAFWNDPI P+EFKYVFLAASSSLKGQSD
Sbjct: 514  TINIGKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQSD 573

Query: 1183 KEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADT 1004
            KEKYEKAR LKD+I  IRAAYTKDF SKD T+RQIAVATYLIDKLALRAGNEKDDDEADT
Sbjct: 574  KEKYEKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADT 633

Query: 1003 VGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFD 824
            VGCCTLKV NVE  PP+ LKFDFLGKDSI+Y N VEVE PVYKAI QF+TGK+  DDLFD
Sbjct: 634  VGCCTLKVENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLFD 693

Query: 823  KLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVA 644
            KLDT+KLN HLK LMPGLTAKVFRTYNASITLD+ML+R T+   VAEKI VYQHANKEVA
Sbjct: 694  KLDTSKLNAHLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEVA 753

Query: 643  IICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLT 464
            IICNHQRTVSKSH AQM+RL  KI+EL+G+L  L+ DL RAKKGKPPL+D+DGK KRNLT
Sbjct: 754  IICNHQRTVSKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNLT 813

Query: 463  PEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKI 284
            PEALERKI QTNAKIEKMERD ++KE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK+
Sbjct: 814  PEALERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEKV 873

Query: 283  FNKSLIAKFAWSMDVDPEFRF 221
            FNKSL+AKFAWSMDVDP FRF
Sbjct: 874  FNKSLLAKFAWSMDVDPSFRF 894


>ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum indicum]
          Length = 893

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 546/802 (68%), Positives = 632/802 (78%), Gaps = 7/802 (0%)
 Frame = -3

Query: 2605 RPLVANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRL--- 2435
            RP  + + ES+ +  Q+K           ++   K    L  D  DSEDDKPLS+RL   
Sbjct: 110  RPSTSVTDESNSVKHQIKD----------EKPSTKATGGLNEDSEDSEDDKPLSARLPAG 159

Query: 2434 --KGNTNKANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSRFS-KSNAGTSGAKHIDY 2264
              K N+N AN+G    NA  ++ K  +   PEDSDDE+PLSS+F  KSNAG S  +    
Sbjct: 160  LSKVNSNHANKG---PNALTSVQKTKIPK-PEDSDDEIPLSSKFQVKSNAGESTNRPSIS 215

Query: 2263 DEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQ 2084
             E+KPL++K  QNGS S E+  K S +  KRP D   S+G S +KKP++SD S   K K+
Sbjct: 216  GERKPLLAKYDQNGSASAER--KPSTILKKRPADGVKSAGESYLKKPKLSDASTPNKTKE 273

Query: 2083 ITVKSEAK-VDNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1907
             ++K E K  D++DH+PI+QR+K+   S+  S +                          
Sbjct: 274  TSIKDEMKDEDDEDHVPISQRIKQQTSSDKKS-SSAKNMTKPISASAKKTSKKPKKVMKN 332

Query: 1906 SQYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATM 1727
            S+YSKS+K+ P SG+GQK WTTLVHNGVIFPPPY PHGV MLYKGK  +LTPEQEEVATM
Sbjct: 333  SKYSKSSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM 391

Query: 1726 FAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSS 1547
            +AVML+TDYM KPKF+ENF  DWRK+LGKNHVIQ+LE CDF PIY+WHQ++K+KKKQM++
Sbjct: 392  YAVMLDTDYMNKPKFKENFMADWRKILGKNHVIQSLEHCDFTPIYEWHQKEKEKKKQMTA 451

Query: 1546 XXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1367
                           KYMWAIV+GVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD
Sbjct: 452  EEKKALKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 511

Query: 1366 ITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 1187
            ITINIGKDAPIPECPIPGE WKE++HDNTVTWLA+WNDPINPKEFKYVFLAASS+LKGQS
Sbjct: 512  ITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQS 571

Query: 1186 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEAD 1007
            DKEKYEKAR LKDYIH IRAAYTKDF +KD T++QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 572  DKEKYEKARLLKDYIHGIRAAYTKDFTNKDPTKKQIAVATYLIDKLALRAGNEKDDDEAD 631

Query: 1006 TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLF 827
            TVGCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE PV+KAI QF++GKK +DD+F
Sbjct: 632  TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVETPVFKAIQQFRSGKKGSDDMF 691

Query: 826  DKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEV 647
            D+LDT+KLN HLKELMPGLTAKVFRTYNASITLDD L+R T+  +VAEK+ VYQHANKEV
Sbjct: 692  DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDKLSRETKGGDVAEKVVVYQHANKEV 751

Query: 646  AIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNL 467
            AIICNHQRTVSKSH+AQM+RL EKIEEL+GVL++L+ DL RAKKGKPPLK +DGK KRNL
Sbjct: 752  AIICNHQRTVSKSHSAQMTRLNEKIEELKGVLEELQTDLARAKKGKPPLKSADGKPKRNL 811

Query: 466  TPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 287
             P+ALE+KIAQTNAKIEKMERD ++KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 812  NPDALEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 871

Query: 286  IFNKSLIAKFAWSMDVDPEFRF 221
            IFNKSL+AKFAW+MDVDP FRF
Sbjct: 872  IFNKSLLAKFAWAMDVDPSFRF 893


>ref|XP_010545254.1| PREDICTED: DNA topoisomerase 1 [Tarenaya hassleriana]
            gi|729356539|ref|XP_010545255.1| PREDICTED: DNA
            topoisomerase 1 [Tarenaya hassleriana]
            gi|729356542|ref|XP_010545256.1| PREDICTED: DNA
            topoisomerase 1 [Tarenaya hassleriana]
          Length = 972

 Score = 1055 bits (2729), Expect = 0.0
 Identities = 547/837 (65%), Positives = 631/837 (75%), Gaps = 43/837 (5%)
 Frame = -3

Query: 2602 PLVANSK---ESSPLDGQLKQSPQQNALVAVKEEE---IKDGNSLKSDDGDSEDDKPLSS 2441
            P+ A+S     SS       +SP +N  V V +E    +KD +  K ++ DS+DDKPLS+
Sbjct: 140  PVSASSSTKLSSSYTQASTVKSPIRNDRVLVGKEGNRLLKDPSEFKCEEEDSDDDKPLSA 199

Query: 2440 RLKGNTNKANQGLGAS------------NADAAISKVNLKTDPEDSDDEVPLSSRFS-KS 2300
            R+KG++N+ ++G  +S            +    + K++     E+ DDE P+SS+   K+
Sbjct: 200  RVKGDSNQLSKGPSSSARGNSQLLVEKSSGRPPLVKLSRNIKNEELDDEAPISSKVQIKT 259

Query: 2299 NAGTSGAKHIDYDEKKPLVSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPR 2120
            + G    K I   +KK + +K+ QNG T + +  ++S  P KRPL+K SSS  S VKKP+
Sbjct: 260  SVGALSKKPIQIQDKKSMANKIHQNGFTPKSEG-RNSEAPAKRPLEKGSSSDQSFVKKPK 318

Query: 2119 VSDTSKEVKVKQITVKS------------------------EAKVDNDDHIPIAQRMKKL 2012
            + D+S  VK KQ  VK+                        E   D+DDH+PIA+RMK  
Sbjct: 319  LLDSSTSVKTKQGPVKADVSDDKRKILNVSKSAKADQVSVKEDNSDDDDHVPIAKRMKP- 377

Query: 2011 APSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXSQYSKSTKMLPGSGDGQKKWTTLVH 1832
              S  N  +                          S+YSKS+K LP SGDGQKKWTTL H
Sbjct: 378  -DSSTNKSSAVKPNVKKQLTSSKMITRKPNSPAKDSKYSKSSKSLP-SGDGQKKWTTLEH 435

Query: 1831 NGVIFPPPYTPHGVNMLYKGKEANLTPEQEEVATMFAVMLETDYMQKPKFRENFWNDWRK 1652
            NGVIFPPPY PHGV MLY+GK  +LTPEQEEVATM AVM +TDY  KP FRENFWNDW+K
Sbjct: 436  NGVIFPPPYKPHGVKMLYQGKPVDLTPEQEEVATMIAVMRDTDYYNKPTFRENFWNDWQK 495

Query: 1651 LLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQMSSXXXXXXXXXXXXXXXKYMWAIVDGV 1472
            +LGKNHVIQ L+DCDF PIY+WH  +K+KKKQMS+               KYMWAIVDGV
Sbjct: 496  ILGKNHVIQKLDDCDFTPIYEWHMREKEKKKQMSAEEKKALKEEKLKQEEKYMWAIVDGV 555

Query: 1471 KEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGERWKEVK 1292
            KEKVGNFRVEPPGLFRGRGEHPKMGKLK RI P DITINIGK+AP+PECPIPGE WKEVK
Sbjct: 556  KEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIHPCDITINIGKEAPVPECPIPGESWKEVK 615

Query: 1291 HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHSIRAAYTKD 1112
            HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKD+I SIRAAYTK+
Sbjct: 616  HDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKDHIGSIRAAYTKN 675

Query: 1111 FVSKDRTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFL 932
            F+SKD T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFL
Sbjct: 676  FMSKDVTKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFL 735

Query: 931  GKDSIQYVNTVEVEHPVYKAIGQFQTGKKQNDDLFDKLDTAKLNTHLKELMPGLTAKVFR 752
            GKDSIQYVNTVEVE PVYKAIGQFQ GK + DDLFD+LDT+KLN HLKELMPGLTAKVFR
Sbjct: 736  GKDSIQYVNTVEVEPPVYKAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPGLTAKVFR 795

Query: 751  TYNASITLDDMLNRGTRDAEVAEKIEVYQHANKEVAIICNHQRTVSKSHTAQMSRLTEKI 572
            TYNASITLD ML++ TRD EV EK+ VYQ ANK+VAIICNHQR+VSKSH AQ+ RL  KI
Sbjct: 796  TYNASITLDVMLSKETRDGEVGEKVVVYQQANKQVAIICNHQRSVSKSHGAQIERLAGKI 855

Query: 571  EELEGVLKDLKVDLDRAKKGKPPLKDSDGKRKRNLTPEALERKIAQTNAKIEKMERDMKS 392
            EEL  +L++L  DLDRA+KGKPPL  SDGKR+RNLTPEALE+KIAQTNAKIEKMERDM++
Sbjct: 856  EELRELLEELNSDLDRARKGKPPLMGSDGKRRRNLTPEALEKKIAQTNAKIEKMERDMQT 915

Query: 391  KEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLIAKFAWSMDVDPEFRF 221
            KED+KTVALGTSKINYLDPRI+VAWCKRH+VPIEKIFNKSL+AKFAW+MDVDPEFRF
Sbjct: 916  KEDMKTVALGTSKINYLDPRISVAWCKRHDVPIEKIFNKSLLAKFAWAMDVDPEFRF 972


>gb|KHN46493.1| DNA topoisomerase 1 [Glycine soja] gi|947075126|gb|KRH23966.1|
            hypothetical protein GLYMA_12G013600 [Glycine max]
            gi|947075127|gb|KRH23967.1| hypothetical protein
            GLYMA_12G013600 [Glycine max]
          Length = 894

 Score = 1052 bits (2720), Expect = 0.0
 Identities = 545/805 (67%), Positives = 620/805 (77%), Gaps = 13/805 (1%)
 Frame = -3

Query: 2596 VANSKESSPLDGQLKQSPQQNALVAVKEEEIKDGNSLKSDDGDSEDDKPLSSRLKGNTNK 2417
            VANSK  S  D Q K S          E   K+      D  D ED+KPLS RLK     
Sbjct: 106  VANSKSPSLGDRQ-KMSVDIKGEPKTIEHHAKN---FVEDSEDDEDNKPLSFRLKN---- 157

Query: 2416 ANQGLGASNADAAISKVNLKTDPEDSDDEVPLSSR-FSKSNAGTSGAKHIDYDEKKPL-- 2246
                   SN D  ++ V  K   EDSDD+VPL+ + +  SN GT+ + H D ++KKP+  
Sbjct: 158  -------SNHDNKVTSVIAKKSSEDSDDDVPLAKKLYRNSNLGTTSSNHDDSNQKKPISK 210

Query: 2245 VSKVQQNGSTSREKQLKSSPMPVKRPLDKASSSGPSSVKKPRVSDTSKEVKVKQITVKSE 2066
            + K Q+NGS    K  + SP+P KRPLD ++S  PS VKK +V D    +K K ++VK E
Sbjct: 211  IQKEQKNGSGMSNKLDRPSPLPAKRPLDNSNSLHPS-VKKSKVLDPVASIKSKAVSVKHE 269

Query: 2065 AKV---DNDDHIPIAQRMKKLAPSENNSVTXXXXXXXXXXXXXXXXXXXXXXXXXXS--- 1904
             KV   D+DD IPI+QR+KK A S + S +                              
Sbjct: 270  LKVEDDDDDDDIPISQRIKKSAMSGDKSSSMKKVLTKVTKVNKPGSKPFKKQIKKTVKKS 329

Query: 1903 ----QYSKSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVNMLYKGKEANLTPEQEEV 1736
                +YSKS+K+LP SGDGQKKWTTLVHNGVIFPPPY PHGV MLYKG+  +LTPEQEEV
Sbjct: 330  GSGSEYSKSSKILPSSGDGQKKWTTLVHNGVIFPPPYQPHGVKMLYKGRPVDLTPEQEEV 389

Query: 1735 ATMFAVMLETDYMQKPKFRENFWNDWRKLLGKNHVIQNLEDCDFKPIYDWHQEQKDKKKQ 1556
            ATM+AVM +T+YMQK KF+ENFWNDWRKLLG+NHVIQNL+DCDF PIYDW+Q +KDKKKQ
Sbjct: 390  ATMYAVMRDTEYMQKDKFKENFWNDWRKLLGRNHVIQNLKDCDFTPIYDWYQSEKDKKKQ 449

Query: 1555 MSSXXXXXXXXXXXXXXXKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1376
            M++               KYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI 
Sbjct: 450  MTTEEKKALKEEKMKLEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIH 509

Query: 1375 PSDITINIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLK 1196
            P DITINI KDAPIPECPIPGERWKE++HDNTVTWLA+W+DPINPK FKYVFLAASSSLK
Sbjct: 510  PGDITINIAKDAPIPECPIPGERWKEIRHDNTVTWLAYWSDPINPKLFKYVFLAASSSLK 569

Query: 1195 GQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDRTRRQIAVATYLIDKLALRAGNEKDDD 1016
            GQSDKEKYEKAR LKDYI +IR+AYTKDF SKD T++QIAVATYLIDKLALRAGNEKDDD
Sbjct: 570  GQSDKEKYEKARTLKDYIGNIRSAYTKDFTSKDITKQQIAVATYLIDKLALRAGNEKDDD 629

Query: 1015 EADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEHPVYKAIGQFQTGKKQND 836
            EADTVGCCTLKV NV   PPNKLKF+FLGKDSI+Y NTVEVE PVY AI +FQ  KK  D
Sbjct: 630  EADTVGCCTLKVENVTREPPNKLKFNFLGKDSIKYENTVEVELPVYNAILKFQKDKKPGD 689

Query: 835  DLFDKLDTAKLNTHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDAEVAEKIEVYQHAN 656
            DLFDKLDT+KLN HLKELMPGLTAKVFRT+NASITLD MLN+ T+D +V EKI VYQHAN
Sbjct: 690  DLFDKLDTSKLNAHLKELMPGLTAKVFRTFNASITLDVMLNKETKDGDVGEKIVVYQHAN 749

Query: 655  KEVAIICNHQRTVSKSHTAQMSRLTEKIEELEGVLKDLKVDLDRAKKGKPPLKDSDGKRK 476
            K+VAIICNHQR+VSKSHTAQMS+LTEKI+EL+ VLK+LK DLDRA+KGKPP K SDGKRK
Sbjct: 750  KQVAIICNHQRSVSKSHTAQMSKLTEKIDELQAVLKELKTDLDRARKGKPPSKSSDGKRK 809

Query: 475  RNLTPEALERKIAQTNAKIEKMERDMKSKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 296
            +NL+PE LE+KI+QTNAKIEKM+RDMK+KEDLKTVALGTSKINYLDPRITVAWCKRHEVP
Sbjct: 810  KNLSPEMLEKKISQTNAKIEKMQRDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 869

Query: 295  IEKIFNKSLIAKFAWSMDVDPEFRF 221
            IEKIFNKSL+AKF W+MDVDP+FRF
Sbjct: 870  IEKIFNKSLLAKFCWAMDVDPDFRF 894