BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006377
         (2708 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform ...  1256   0.0  
ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citr...  1255   0.0  
ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citr...  1103   0.0  
gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arbo...  1082   0.0  
ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobro...  1077   0.0  
ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypi...  1070   0.0  
gb|KHG00901.1| DNA topoisomerase 1 -like protein [Gossypium arbo...  1066   0.0  
ref|XP_012434356.1| PREDICTED: DNA topoisomerase 1-like isoform ...  1060   0.0  
ref|XP_002300344.1| DNA topoisomerase family protein [Populus tr...  1047   0.0  
ref|XP_011047542.1| PREDICTED: DNA topoisomerase 1-like [Populus...  1039   0.0  
ref|XP_011007608.1| PREDICTED: DNA topoisomerase 1-like [Populus...  1032   0.0  
ref|XP_002317355.1| DNA topoisomerase family protein [Populus tr...  1022   0.0  
ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus ...  1022   0.0  
ref|XP_008449103.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...  1004   0.0  
ref|XP_012070937.1| PREDICTED: DNA topoisomerase 1 [Jatropha cur...  1001   0.0  
dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]               993   0.0  
ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis...   993   0.0  
ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum...   973   0.0  
ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo...   970   0.0  
ref|XP_010545254.1| PREDICTED: DNA topoisomerase 1 [Tarenaya has...   969   0.0  

>ref|XP_006474977.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Citrus sinensis]
            gi|568842074|ref|XP_006474978.1| PREDICTED: DNA
            topoisomerase 1-like isoform X2 [Citrus sinensis]
            gi|568842076|ref|XP_006474979.1| PREDICTED: DNA
            topoisomerase 1-like isoform X3 [Citrus sinensis]
            gi|568842078|ref|XP_006474980.1| PREDICTED: DNA
            topoisomerase 1-like isoform X4 [Citrus sinensis]
          Length = 902

 Score = 1256 bits (3250), Expect = 0.0
 Identities = 659/858 (76%), Positives = 684/858 (79%), Gaps = 1/858 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K LPVKSPPPSQKA+TSSAKA P                                     
Sbjct: 67   KVLPVKSPPPSQKATTSSAKASP----------------------SKSPMRSPVKSPVRS 104

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARLK 2347
               SPVANSKESSPLDD+LKQSPQ NALA VK+EEIKD NGL          KPLSARLK
Sbjct: 105  PVKSPVANSKESSPLDDRLKQSPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLK 164

Query: 2346 GNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFSKLNAGTSSARHIDSDEKK 2167
            GN+ N NQG+GASK DAAI +VNVKTDPE SDDEVPLSSRF K NAGTS A+ IDSDEKK
Sbjct: 165  GNSKNVNQGIGASKADAAISEVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKK 224

Query: 2166 PLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQVTVK 1987
            PLASKVQQNGST RE Q KSS VPVKR ++               SDTSKEVKVKQVTVK
Sbjct: 225  PLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVK 284

Query: 1986 AEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1807
             E+K DDDDHIPI+QR+K SAPS  KSVT                               
Sbjct: 285  VEKKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSNKINKKTKKVIKNSQYSK 344

Query: 1806 STKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFAVML 1627
            STKMLPGSGDGQKKWTTLVHNGVIFPPPY PHGVKMLYK KEVNLTPEQEEVATMFAVML
Sbjct: 345  STKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVML 404

Query: 1626 ETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXXXXX 1447
            +TDYMQKPKFRENFWNDWR+LLGKNHVIQNLE CDF PIYDWH                 
Sbjct: 405  DTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKA 464

Query: 1446 XXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1267
                      KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINI
Sbjct: 465  LKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINI 524

Query: 1266 GKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDKEKY 1087
            GKD PIPECPIPGESWKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSDKEKY
Sbjct: 525  GKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKY 584

Query: 1086 EKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 907
            EKARKLKDYIHSIRAAYTKDFVS+D TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 585  EKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 644

Query: 906  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 727
            TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT
Sbjct: 645  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 704

Query: 726  AKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAIICN 547
            AKLNAHLKELMPGLTAKVFRTYNASITLD MLN+GT DG+VA KI+VYQRANKEVAIICN
Sbjct: 705  AKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICN 764

Query: 546  HQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPL-KDSDGKGKRNLTPEA 370
            HQRTVSK+H+AQMSRLTEKIE+            DRAKKGKPPL KDSDGK KRNL PEA
Sbjct: 765  HQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEA 824

Query: 369  LERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 190
            LERK+AQTNAKIEKMERDM+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK
Sbjct: 825  LERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 884

Query: 189  SLLAKFAWSMDVDPEFRF 136
            SLLAKFAW+MDVDPEFRF
Sbjct: 885  SLLAKFAWAMDVDPEFRF 902


>ref|XP_006452479.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|567920950|ref|XP_006452481.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555705|gb|ESR65719.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
            gi|557555707|gb|ESR65721.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 902

 Score = 1255 bits (3247), Expect = 0.0
 Identities = 657/858 (76%), Positives = 683/858 (79%), Gaps = 1/858 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K LPVKSPPPSQKA+TSSAKA P+                                    
Sbjct: 67   KVLPVKSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPVKS------------------ 108

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARLK 2347
                PVANSKESSPLDD+LKQ PQ NALA VK+EEIKD NGL          KPLSARLK
Sbjct: 109  ----PVANSKESSPLDDRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLK 164

Query: 2346 GNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFSKLNAGTSSARHIDSDEKK 2167
            GNT N NQG+GASK DAAI +VNVKTDPE SDDEVPLSSRF K NAGTS A+ IDSDEKK
Sbjct: 165  GNTKNVNQGIGASKADAAISEVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKK 224

Query: 2166 PLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQVTVK 1987
            PLASKVQQNGST RE Q KSS VPVKR ++               SDTSKEVKVKQVTVK
Sbjct: 225  PLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVK 284

Query: 1986 AEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1807
             E+K DDDDHIPI+QR+K SAPS  KSVT                               
Sbjct: 285  VEKKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSK 344

Query: 1806 STKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFAVML 1627
            STKMLPGSGDGQKKWTTLVHNGVIFPPPY PHGVKMLYK KEVNLTPEQEEVATMFAVML
Sbjct: 345  STKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVML 404

Query: 1626 ETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXXXXX 1447
            +TDYMQKPKFRENFWNDWR+LLGKNHVIQNLE CDF PIYDWH                 
Sbjct: 405  DTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKA 464

Query: 1446 XXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1267
                      KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINI
Sbjct: 465  LKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINI 524

Query: 1266 GKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDKEKY 1087
            GKD PIPECPIPGESWKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSD+EKY
Sbjct: 525  GKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKY 584

Query: 1086 EKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 907
            EKARKLKDYIHSIRAAYTKDFVS+D TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 585  EKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 644

Query: 906  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 727
            TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT
Sbjct: 645  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 704

Query: 726  AKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAIICN 547
            AKLNAHLKELMPGLTAKVFRTYNASITLD MLN+GT DG+VA KI+VYQRANKEVAIICN
Sbjct: 705  AKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICN 764

Query: 546  HQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPL-KDSDGKGKRNLTPEA 370
            HQRTVSK+H+AQMSRLTEKIE+            DRAKKGKPPL KDSDGK KRNL PEA
Sbjct: 765  HQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEA 824

Query: 369  LERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 190
            LERK+AQTNAKIEKMERDM+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK
Sbjct: 825  LERKMAQTNAKIEKMERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNK 884

Query: 189  SLLAKFAWSMDVDPEFRF 136
            SLLAKFAW+MDVDPEFRF
Sbjct: 885  SLLAKFAWAMDVDPEFRF 902


>ref|XP_006452480.1| hypothetical protein CICLE_v10007398mg [Citrus clementina]
            gi|557555706|gb|ESR65720.1| hypothetical protein
            CICLE_v10007398mg [Citrus clementina]
          Length = 824

 Score = 1103 bits (2852), Expect = 0.0
 Identities = 582/780 (74%), Positives = 605/780 (77%), Gaps = 1/780 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K LPVKSPPPSQKA+TSSAKA P+                                    
Sbjct: 67   KVLPVKSPPPSQKATTSSAKASPLKSPMRSPVKSPVRSPVKS------------------ 108

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARLK 2347
                PVANSKESSPLDD+LKQ PQ NALA VK+EEIKD NGL          KPLSARLK
Sbjct: 109  ----PVANSKESSPLDDRLKQLPQHNALAVVKKEEIKDGNGLKSDDNDSEDDKPLSARLK 164

Query: 2346 GNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFSKLNAGTSSARHIDSDEKK 2167
            GNT N NQG+GASK DAAI +VNVKTDPE SDDEVPLSSRF K NAGTS A+ IDSDEKK
Sbjct: 165  GNTKNVNQGIGASKADAAISEVNVKTDPEDSDDEVPLSSRFPKSNAGTSGAKPIDSDEKK 224

Query: 2166 PLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQVTVK 1987
            PLASKVQQNGST RE Q KSS VPVKR ++               SDTSKEVKVKQVTVK
Sbjct: 225  PLASKVQQNGSTSRETQQKSSSVPVKRPLQKASSSGASSAKKPKVSDTSKEVKVKQVTVK 284

Query: 1986 AEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1807
             E+K DDDDHIPI+QR+K SAPS  KSVT                               
Sbjct: 285  VEKKADDDDHIPISQRMKNSAPSVKKSVTNTAKATKSVSSSSKKINKKTKKVIKNSQYSK 344

Query: 1806 STKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFAVML 1627
            STKMLPGSGDGQKKWTTLVHNGVIFPPPY PHGVKMLYK KEVNLTPEQEEVATMFAVML
Sbjct: 345  STKMLPGSGDGQKKWTTLVHNGVIFPPPYLPHGVKMLYKGKEVNLTPEQEEVATMFAVML 404

Query: 1626 ETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXXXXX 1447
            +TDYMQKPKFRENFWNDWR+LLGKNHVIQNLE CDF PIYDWH                 
Sbjct: 405  DTDYMQKPKFRENFWNDWRKLLGKNHVIQNLEGCDFKPIYDWHQEQKEKKKQMSSEEKKA 464

Query: 1446 XXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINI 1267
                      KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRI+PSDITINI
Sbjct: 465  LKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIQPSDITINI 524

Query: 1266 GKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDKEKY 1087
            GKD PIPECPIPGESWKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSD+EKY
Sbjct: 525  GKDVPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREKY 584

Query: 1086 EKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 907
            EKARKLKDYIHSIRAAYTKDFVS+D TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC
Sbjct: 585  EKARKLKDYIHSIRAAYTKDFVSRDGTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCC 644

Query: 906  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 727
            TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT
Sbjct: 645  TLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDT 704

Query: 726  AKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAIICN 547
            AKLNAHLKELMPGLTAKVFRTYNASITLD MLN+GT DG+VA KI+VYQRANKEVAIICN
Sbjct: 705  AKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKGTGDGDVAVKIDVYQRANKEVAIICN 764

Query: 546  HQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPL-KDSDGKGKRNLTPEA 370
            HQRTVSK+H+AQMSRLTEKIE+            DRAKKGKPPL KDSDGK KRNL PEA
Sbjct: 765  HQRTVSKTHSAQMSRLTEKIEDLKGVLKDLRVDLDRAKKGKPPLMKDSDGKRKRNLAPEA 824


>gb|KHG20024.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
          Length = 903

 Score = 1082 bits (2798), Expect = 0.0
 Identities = 568/863 (65%), Positives = 640/863 (74%), Gaps = 6/863 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K+ P++SP  S K+S SS+KA PV                                    
Sbjct: 80   KSPPIRSPILSPKSSNSSSKASPVRS---------------------------------- 105

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEE--IKDENGLXXXXXXXXXXKPLSAR 2353
                PV +SK S+  +DQ KQ+ +QN   AVKEE+  IK  +            KPLSAR
Sbjct: 106  ----PVVSSKASTSFNDQSKQASKQNKFTAVKEEKSPIKRTDETNSDDDDDDDSKPLSAR 161

Query: 2352 LKGNTNNGNQGLGASKPDAA---IFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHI 2185
            LKG ++ GN+G+  S P  +   + K+ VK   E  DD+ PLS+RFS K N GTSS++  
Sbjct: 162  LKGISSQGNKGVSTSTPAQSQRFVPKIEVKGSAEDPDDDAPLSARFSTKSNTGTSSSKPY 221

Query: 2184 DSDEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKV 2005
             S EKKPLASK+QQNGS ++ KQ KSS++  KR ++               SDT   +K 
Sbjct: 222  GSHEKKPLASKIQQNGSIMKVKQQKSSMLSDKRPLDKGNSSDQSYAKKPKISDTPTMMKT 281

Query: 2004 KQVTVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXX 1825
            KQVTVKAE KDD+DDHIPI+QRIKKS  S  K+ +                         
Sbjct: 282  KQVTVKAE-KDDEDDHIPISQRIKKSVSSVSKASSVKQKATKVVSSSFKKINKKSKKDMK 340

Query: 1824 XXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVAT 1645
                  STK+ P SGDGQKKW+TLVHNGVIFPPPY PHGVKMLY  + V+LTPEQEEVAT
Sbjct: 341  KSKYSKSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGRPVDLTPEQEEVAT 400

Query: 1644 MFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXX 1465
            MFAVM ETDYM KP+F++NFW DW +LLG+NHVI++L+ CDF PIY+WH           
Sbjct: 401  MFAVMQETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQMS 460

Query: 1464 XXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS 1285
                            KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP 
Sbjct: 461  SEEKKALKEEKLMQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPC 520

Query: 1284 DITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQ 1105
            DITINIGKDAPIPECPIPGE WK++KHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQ
Sbjct: 521  DITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 580

Query: 1104 SDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEA 925
            SDKEKYEKAR LKDYI +IRAAYTKDF +KDVT+RQIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 581  SDKEKYEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDDEA 640

Query: 924  DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDL 745
            DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGK ++DDL
Sbjct: 641  DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDL 700

Query: 744  FDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKE 565
            FD+LDT+KLNAHLKELMPGLTAKVFRT+NASITLDDMLN+ T+DG+VAEK+ +YQRANKE
Sbjct: 701  FDELDTSKLNAHLKELMPGLTAKVFRTFNASITLDDMLNKETKDGDVAEKVVIYQRANKE 760

Query: 564  VAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRN 385
            VAIICNHQR++SKSH+AQMSRLTEKI E            DRAKKGKPPLKD+DGK KRN
Sbjct: 761  VAIICNHQRSISKSHSAQMSRLTEKINELKGLVKELKTDLDRAKKGKPPLKDADGKQKRN 820

Query: 384  LTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 205
            LTPEA+E+KIAQTN KIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE
Sbjct: 821  LTPEAIEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 880

Query: 204  KIFNKSLLAKFAWSMDVDPEFRF 136
            KIFNKSLLAKFAW+MDVDP+FRF
Sbjct: 881  KIFNKSLLAKFAWAMDVDPDFRF 903


>ref|XP_007020664.1| DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
            gi|590606147|ref|XP_007020665.1| DNA topoisomerase I
            alpha isoform 1 [Theobroma cacao]
            gi|508720292|gb|EOY12189.1| DNA topoisomerase I alpha
            isoform 1 [Theobroma cacao] gi|508720293|gb|EOY12190.1|
            DNA topoisomerase I alpha isoform 1 [Theobroma cacao]
          Length = 904

 Score = 1077 bits (2785), Expect = 0.0
 Identities = 568/863 (65%), Positives = 631/863 (73%), Gaps = 6/863 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K+ PVKSP  S KASTSS KALPV                                    
Sbjct: 80   KSPPVKSPILSPKASTSSTKALPVKS---------------------------------- 105

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKE--EEIKDENGLXXXXXXXXXXKPLSAR 2353
                PV N K S+ L+DQ KQ+ +QN   AVKE    IK                PLSAR
Sbjct: 106  ----PVVNFKASTSLNDQSKQALKQNMTTAVKEGRSPIKGTTEPNSDDDDDDDSLPLSAR 161

Query: 2352 LKGNTNNGNQGLGASKPDAA---IFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHI 2185
            LKG +N GN+G   S P  +   + K  VK   E  DDE PLS+RF+ K N GTSS+R  
Sbjct: 162  LKGISNQGNKGASTSAPAQSRRLVPKTEVKVSAEDPDDEAPLSARFNVKSNTGTSSSRLH 221

Query: 2184 DSDEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKV 2005
            D DEKKPLASK+QQNGS ++ KQ  SS +  KR ++               SD    +K 
Sbjct: 222  DCDEKKPLASKIQQNGSIMKGKQQNSSTLSGKRPLDKGNSSDHSSAKKPKTSDAPTTMKT 281

Query: 2004 KQVTVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXX 1825
            KQVTVKAE+ D+DDDH+PIAQR+KKS  S+ K  +                         
Sbjct: 282  KQVTVKAEKADEDDDHMPIAQRMKKSTASNSKLSSMKQKTTKVVSSSFKKINKKSKKEMK 341

Query: 1824 XXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVAT 1645
                  STK+ P SGDGQKKW+TLVHNGVIFP PYTPHGVKMLY  + V+LTPEQEEVAT
Sbjct: 342  SSKYIKSTKVPPSSGDGQKKWSTLVHNGVIFPSPYTPHGVKMLYDGRPVDLTPEQEEVAT 401

Query: 1644 MFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXX 1465
            MFAVM +TDYM K +F++NFW DW +LLGKNH I++L+ CDF PIY+WH           
Sbjct: 402  MFAVMKDTDYMSKTQFKKNFWEDWSKLLGKNHTIKDLDRCDFTPIYEWHLQEKEKKKQMS 461

Query: 1464 XXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPS 1285
                            K+MWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPS
Sbjct: 462  SEEKKALKEEKLKQEEKFMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPS 521

Query: 1284 DITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQ 1105
            DITINIGKDAPIPECPIPGE WK++KHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQ
Sbjct: 522  DITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQ 581

Query: 1104 SDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEA 925
            SDKEKYEKAR LKDYI +IRAAYTKDF +KDV +RQIAVATYLIDKLALRAGNEKDDDEA
Sbjct: 582  SDKEKYEKARMLKDYIKNIRAAYTKDFTTKDVMKRQIAVATYLIDKLALRAGNEKDDDEA 641

Query: 924  DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDL 745
            DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGK ++DDL
Sbjct: 642  DTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKSKSDDL 701

Query: 744  FDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKE 565
            FDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD+MLN+ T+DG+VAEK+ VYQRANKE
Sbjct: 702  FDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVVYQRANKE 761

Query: 564  VAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRN 385
            VAIICNHQR++SKSH+AQMSRLTEKI E            DRAKKGKPPLKD+DGK KRN
Sbjct: 762  VAIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRN 821

Query: 384  LTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 205
            LTP+A+++KI QTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE
Sbjct: 822  LTPQAIQKKIDQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIE 881

Query: 204  KIFNKSLLAKFAWSMDVDPEFRF 136
            KIFNKSLLAKFAW+MDVDP+FRF
Sbjct: 882  KIFNKSLLAKFAWAMDVDPDFRF 904


>ref|XP_012443903.1| PREDICTED: DNA topoisomerase 1-like [Gossypium raimondii]
            gi|823222380|ref|XP_012443904.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222382|ref|XP_012443905.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222384|ref|XP_012443906.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222386|ref|XP_012443907.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222388|ref|XP_012443908.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222390|ref|XP_012443909.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|823222392|ref|XP_012443910.1| PREDICTED: DNA
            topoisomerase 1-like [Gossypium raimondii]
            gi|763795950|gb|KJB62946.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
            gi|763795951|gb|KJB62947.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
            gi|763795953|gb|KJB62949.1| hypothetical protein
            B456_009G444700 [Gossypium raimondii]
          Length = 901

 Score = 1070 bits (2768), Expect = 0.0
 Identities = 567/865 (65%), Positives = 634/865 (73%), Gaps = 8/865 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K+ P +SP  S K+S SSAKA PV                                    
Sbjct: 80   KSPPTRSPILSPKSSNSSAKASPVRS---------------------------------- 105

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEE----IKDENGLXXXXXXXXXXKPLS 2359
                PV +SK S+ L DQ KQ+ +QN   AVKEE+      DE             KPLS
Sbjct: 106  ----PVVSSKASTSLSDQSKQALKQNKFTAVKEEKRLIKCTDETN---SDEDDDDSKPLS 158

Query: 2358 ARLKGNTNNGNQGLGASKPDAA---IFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSAR 2191
            ARLKG ++ GN+G+  S P  +   + K+ VK   E  DD+ PLS+RFS K N GTSS++
Sbjct: 159  ARLKGISSQGNKGVSTSTPAQSQRLVPKIEVKGSAEDPDDDAPLSARFSMKSNTGTSSSK 218

Query: 2190 HIDSDEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEV 2011
               S EKKPL SK+QQNGS +++KQ K S++  KR ++               SDT   +
Sbjct: 219  PYGSHEKKPLPSKIQQNGSIMKDKQQKCSVLSDKRPLDKGNSSDQSYAKKPKISDTPTTM 278

Query: 2010 KVKQVTVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXX 1831
            K KQVTVKAE KDD+DDHIPI+QRIKKS  S +   +                       
Sbjct: 279  KTKQVTVKAE-KDDEDDHIPISQRIKKSV-SSVSKTSSVKQKATKVVSSSFKKINKSKKD 336

Query: 1830 XXXXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEV 1651
                    STK+ P SGDGQKKW+TLVHNGVIFPPPY PHGVKMLY  + V+LTPEQEEV
Sbjct: 337  MKKSKYSKSTKLSPSSGDGQKKWSTLVHNGVIFPPPYKPHGVKMLYDGQPVDLTPEQEEV 396

Query: 1650 ATMFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXX 1471
            ATMFAVM ETDYM KP+F++NFW DW +LLG+NHVI++L+ CDF PIY+WH         
Sbjct: 397  ATMFAVMQETDYMSKPQFKKNFWEDWSKLLGRNHVIKSLDKCDFTPIYEWHLQEKEKKKQ 456

Query: 1470 XXXXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIR 1291
                              KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIR
Sbjct: 457  MSSEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIR 516

Query: 1290 PSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLK 1111
            P DITINIGKDAPIPECPIPGE WK++KHDNTVTWLAFWND INPKEFKYVFLAASSSLK
Sbjct: 517  PCDITINIGKDAPIPECPIPGERWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLK 576

Query: 1110 GQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDD 931
            GQSDKEKYEKAR LKDYI +IRAAYTKDF +KDVT+RQIAVATYLIDKLALRAGNEKDDD
Sbjct: 577  GQSDKEKYEKARLLKDYIKNIRAAYTKDFTAKDVTKRQIAVATYLIDKLALRAGNEKDDD 636

Query: 930  EADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQND 751
            EADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQT K ++D
Sbjct: 637  EADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTRKSKSD 696

Query: 750  DLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRAN 571
            DLFD+LDT+KLNAHLKELMPGLTAKVFRTYNASITLDDMLN+ T DG+VAEK+ +YQRAN
Sbjct: 697  DLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLDDMLNQETEDGDVAEKVVIYQRAN 756

Query: 570  KEVAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGK 391
            KEVAIICNHQR++SKSH+AQMSRLTEKI E            DRAKKGKPPLKD+DGK K
Sbjct: 757  KEVAIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKTDLDRAKKGKPPLKDADGKQK 816

Query: 390  RNLTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 211
            RNLTPEA+E+KIAQTN KIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVP
Sbjct: 817  RNLTPEAIEKKIAQTNVKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVP 876

Query: 210  IEKIFNKSLLAKFAWSMDVDPEFRF 136
            IEKIFNKSLLAKFAW+MDVDP+FRF
Sbjct: 877  IEKIFNKSLLAKFAWAMDVDPDFRF 901


>gb|KHG00901.1| DNA topoisomerase 1 -like protein [Gossypium arboreum]
          Length = 903

 Score = 1066 bits (2756), Expect = 0.0
 Identities = 558/862 (64%), Positives = 634/862 (73%), Gaps = 5/862 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K+LPV+SP  S KASTSSA+  PV                                    
Sbjct: 80   KSLPVRSPILSPKASTSSARTSPVKS---------------------------------- 105

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARLK 2347
                PVAN K  + L+D  KQ+ +Q+    VKEE+   +             +PLSARLK
Sbjct: 106  ----PVANFKTPASLNDHSKQALKQHKCNVVKEEKSPIKGATETNSDDDDDLQPLSARLK 161

Query: 2346 GNTNNGNQGLGASKPDAA---IFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDS 2179
            G +N G +G   S    +   + K  +K   +  DDE PL  RF+ K +AGTSS++  DS
Sbjct: 162  GISNQGTKGASTSSTSQSHRLVPKTEIKGSTKDPDDEAPLPVRFNMKSSAGTSSSKLYDS 221

Query: 2178 DEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQ 1999
            DEKKPLAS  +QNGST++ KQ KSS++  KR ++               SDTS  +K KQ
Sbjct: 222  DEKKPLASNGEQNGSTVKGKQEKSSMLSGKRPLDKGNSLDQSSAKKPKISDTSTAMKSKQ 281

Query: 1998 VTVKAEEKD-DDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1822
            + VKAE+ D DDDD IPI+QRIKKS P++ K+ +                          
Sbjct: 282  LAVKAEKADEDDDDDIPISQRIKKSTPTNSKTSSMKQKAAKVVSSSLKKLNRKSKKEFKN 341

Query: 1821 XXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATM 1642
                 STK+ P SGDGQKKW+TLVHNGVIFPPPY  HG+K+LY  + ++LTPEQEEVATM
Sbjct: 342  SKYIKSTKVSPSSGDGQKKWSTLVHNGVIFPPPYKLHGIKLLYDGRPIDLTPEQEEVATM 401

Query: 1641 FAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXX 1462
            FAVM +TDYM KP+F++NFW DW +LLGKNH I++L+ CDF PIY+WH            
Sbjct: 402  FAVMKDTDYMNKPQFKKNFWEDWSKLLGKNHTIKDLDKCDFTPIYEWHLQEKEKKKQMSS 461

Query: 1461 XXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1282
                           KYMWA VD V+EKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD
Sbjct: 462  EEKKALKEEKLKQEEKYMWAIVDGVREKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 521

Query: 1281 ITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQS 1102
            ITINIGK+APIPECPIPGESWK++KHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQS
Sbjct: 522  ITINIGKNAPIPECPIPGESWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQS 581

Query: 1101 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD 922
            DKEKYEKAR LK+YI +IRAAYTKDF SKDVT+RQIAVATYLIDKLALRAGN+KDDDEAD
Sbjct: 582  DKEKYEKARMLKEYIRNIRAAYTKDFTSKDVTKRQIAVATYLIDKLALRAGNDKDDDEAD 641

Query: 921  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLF 742
            TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVY AIGQFQTGK ++DDLF
Sbjct: 642  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYNAIGQFQTGKSKSDDLF 701

Query: 741  DKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEV 562
            DKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD+MLN+ T+DG+VAEK+ +YQRANKEV
Sbjct: 702  DKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVIYQRANKEV 761

Query: 561  AIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNL 382
            AIICNHQR++SKSH+AQMSRLTEKI E            DRAKKGKPPLKD+DGK KRNL
Sbjct: 762  AIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKRNL 821

Query: 381  TPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 202
            TPEALE+KIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 822  TPEALEKKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 881

Query: 201  IFNKSLLAKFAWSMDVDPEFRF 136
            IFNKSLLAKFAW+MDVDP+FRF
Sbjct: 882  IFNKSLLAKFAWAMDVDPDFRF 903


>ref|XP_012434356.1| PREDICTED: DNA topoisomerase 1-like isoform X1 [Gossypium raimondii]
            gi|823197693|ref|XP_012434357.1| PREDICTED: DNA
            topoisomerase 1-like isoform X1 [Gossypium raimondii]
            gi|823197696|ref|XP_012434358.1| PREDICTED: DNA
            topoisomerase 1-like isoform X1 [Gossypium raimondii]
            gi|763778431|gb|KJB45554.1| hypothetical protein
            B456_007G311800 [Gossypium raimondii]
          Length = 906

 Score = 1060 bits (2740), Expect = 0.0
 Identities = 556/864 (64%), Positives = 631/864 (73%), Gaps = 7/864 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            K+LPV+SP  S KASTSSA+  PV                                    
Sbjct: 81   KSLPVRSPILSPKASTSSARTSPVKS---------------------------------- 106

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARLK 2347
                PVAN K  + L+D  KQ+ +QN    V E +   +             +PLSARLK
Sbjct: 107  ----PVANFKTPASLNDHSKQALKQNNCNVVNEGKSPIKGATEANSDDDDDLQPLSARLK 162

Query: 2346 GNTNNGNQGLGASKPDAA---IFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDS 2179
            G +N G +G   S    +   + K  +K   +  DDE PLS RF+ K +AGTSS++  DS
Sbjct: 163  GISNQGTKGASTSSTAQSHRLVSKTEIKGSTKDPDDEAPLSVRFNMKSSAGTSSSKLYDS 222

Query: 2178 DEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQ 1999
            DEKKPLAS  +Q  ST++ KQ KSS++  KR ++               SDT   +K KQ
Sbjct: 223  DEKKPLASNSEQKCSTVKGKQEKSSMLSGKRPLDKGNCSDQSSAKKPKISDTPTAMKSKQ 282

Query: 1998 VTVKAEEK---DDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXX 1828
            +TVKAE++   +DDDD IPI+QRIKKS PS+ K+ +                        
Sbjct: 283  LTVKAEKEKADEDDDDDIPISQRIKKSPPSNSKTSSMKQKAAKVVSSSLKKLNKKSKKEF 342

Query: 1827 XXXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVA 1648
                   STK+ P SGDGQKKW+TLVHNGVIFPPPY PHG+K+LY  + ++LTPEQEEVA
Sbjct: 343  KNSKYIKSTKVSPSSGDGQKKWSTLVHNGVIFPPPYKPHGIKLLYDGRPIDLTPEQEEVA 402

Query: 1647 TMFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXX 1468
            TMFAVM +TDYM KP+F++NFW DW +LLGKNH I++L+ CDF PIY+WH          
Sbjct: 403  TMFAVMKDTDYMNKPQFKKNFWEDWSKLLGKNHTIKDLDKCDFTPIYEWHLQEKEKKKQM 462

Query: 1467 XXXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP 1288
                             KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP
Sbjct: 463  SSEEKKALKEEKLKQEEKYMWAIVDRVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP 522

Query: 1287 SDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKG 1108
            SDITINIGK+APIPECPIPGESWK++KHDNTVTWLAFWND INPKEFKYVFLAASSSLKG
Sbjct: 523  SDITINIGKNAPIPECPIPGESWKDIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKG 582

Query: 1107 QSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDE 928
            QSDKEKYEKAR LK+YI +IRAAYTKDF SKDVT+RQIAVATYLIDKLALRAGNEKDDDE
Sbjct: 583  QSDKEKYEKARMLKEYIKNIRAAYTKDFTSKDVTKRQIAVATYLIDKLALRAGNEKDDDE 642

Query: 927  ADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDD 748
            ADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVY AIGQF TGK ++DD
Sbjct: 643  ADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYNAIGQFHTGKSKSDD 702

Query: 747  LFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANK 568
            LFDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD+MLN+ T+DG+VAEK+ +YQRANK
Sbjct: 703  LFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDEMLNKETKDGDVAEKVVIYQRANK 762

Query: 567  EVAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKR 388
            EVAIICNHQR++SKSH+AQMSRLTEKI E            DRAKKGKPPLKD+DGK KR
Sbjct: 763  EVAIICNHQRSISKSHSAQMSRLTEKITELKGVLKELKIDLDRAKKGKPPLKDADGKQKR 822

Query: 387  NLTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI 208
            NLTPE LE+KIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI
Sbjct: 823  NLTPEVLEKKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI 882

Query: 207  EKIFNKSLLAKFAWSMDVDPEFRF 136
            EKIFNKSLLAKFAW+MDVDP+FRF
Sbjct: 883  EKIFNKSLLAKFAWAMDVDPDFRF 906


>ref|XP_002300344.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222847602|gb|EEE85149.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 877

 Score = 1047 bits (2707), Expect = 0.0
 Identities = 557/860 (64%), Positives = 619/860 (71%), Gaps = 4/860 (0%)
 Frame = -3

Query: 2703 ALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2524
            A P+KS   S KAS SSAKA P+                                     
Sbjct: 73   ASPMKSSTGSPKASASSAKASPLKS----------------------------------- 97

Query: 2523 XXSPVANSKESSPLDDQLKQSPQQNALAAVKEEE---IKDENGLXXXXXXXXXXKPLSAR 2353
               P+  ++  +  +DQLKQ+ +Q    AVKEE    + DE+            KPLS+R
Sbjct: 98   ---PLTYTRALTSSNDQLKQASKQVVSNAVKEETKSIVDDEDS--------EDDKPLSSR 146

Query: 2352 LKGNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDSD 2176
            +KG+TNN N+G+ A          +VK +P   DDEVPLSSRF+ K NAGTSS++ I S 
Sbjct: 147  IKGSTNNVNKGVTAP--------AHVKDEPS-DDDEVPLSSRFAMKSNAGTSSSKSIRSS 197

Query: 2175 EKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQV 1996
            E +P  SK Q NGST  +KQ KSS+VP KR ++                D     KVKQV
Sbjct: 198  EIRPFPSKSQLNGSTKNDKQQKSSVVPTKRPMDNKVPSNHSSAKKPKLLDACTTTKVKQV 257

Query: 1995 TVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1816
            TVK E+K DDDDH+ I+QR+KK+  S  KS                              
Sbjct: 258  TVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVTKVVSSSLKKTTQKNKKQMKNSK 317

Query: 1815 XXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFA 1636
               STK+ PGS DGQKKWTTLVHNGVIFPPPY PHGVK+LYK K ++LTPEQEEVATMFA
Sbjct: 318  YSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPIDLTPEQEEVATMFA 377

Query: 1635 VMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXX 1456
            VM +TDY+QKP+FR+NFWNDWR+LLGKNHVIQ L+DCDFNPIY+WH              
Sbjct: 378  VMKDTDYVQKPQFRQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKKKQMSTEE 437

Query: 1455 XXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDIT 1276
                         KYMWA V+ VKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDIT
Sbjct: 438  KKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDIT 497

Query: 1275 INIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDK 1096
            INIGKDAPIPECPIPGE WKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSDK
Sbjct: 498  INIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK 557

Query: 1095 EKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTV 916
            EKYEKARKLKDYIH+IRAAYTKDF SKD+T+RQIAVATYLIDKLALRAGNEKDDDEADTV
Sbjct: 558  EKYEKARKLKDYIHNIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTV 617

Query: 915  GCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDK 736
            GCCTLKV NVECIPPNKLKFDFLGKDSI+Y NTVEVELPVYKAIG FQ  KKQ DDLFD 
Sbjct: 618  GCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIGHFQVAKKQTDDLFDS 677

Query: 735  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAI 556
            LDT+KLNAHLKELMPGLTAKVFRTYNASITLD+ L   T DG+VAEKI +Y +ANK+VAI
Sbjct: 678  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAI 737

Query: 555  ICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNLTP 376
            ICNHQRT+SKSH AQMSRLTEKIEE            DRAKKGKPPLK +DGK KR+LTP
Sbjct: 738  ICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGKPPLKGADGKQKRSLTP 797

Query: 375  EALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 196
            EA+E+KIA TN KIEKME  M+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI+KIF
Sbjct: 798  EAIEKKIATTNQKIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIF 857

Query: 195  NKSLLAKFAWSMDVDPEFRF 136
            NKSLLAKF W+MDVDP+FRF
Sbjct: 858  NKSLLAKFTWAMDVDPQFRF 877


>ref|XP_011047542.1| PREDICTED: DNA topoisomerase 1-like [Populus euphratica]
            gi|743908190|ref|XP_011047543.1| PREDICTED: DNA
            topoisomerase 1-like [Populus euphratica]
          Length = 878

 Score = 1039 bits (2687), Expect = 0.0
 Identities = 554/860 (64%), Positives = 617/860 (71%), Gaps = 4/860 (0%)
 Frame = -3

Query: 2703 ALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2524
            A P+KS   S KAS SSAKA P+                                     
Sbjct: 74   ASPMKSSTGSPKASASSAKASPLKS----------------------------------- 98

Query: 2523 XXSPVANSKESSPLDDQLKQSPQQNALAAVKEEE---IKDENGLXXXXXXXXXXKPLSAR 2353
               P+  ++  +  +DQLKQ+ +Q    AVKEE    + DE+            KPLS+R
Sbjct: 99   ---PLTYTRTLTSSNDQLKQASKQVVSNAVKEETKPIVDDEDS--------EDDKPLSSR 147

Query: 2352 LKGNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDSD 2176
            +KG+TNN N+G+ A          +VK  P   DDEVPLSSRF+ K +AGTSS++ I S 
Sbjct: 148  IKGSTNNVNKGVTAP--------AHVKDGPS-DDDEVPLSSRFAMKSSAGTSSSKSIRSS 198

Query: 2175 EKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQV 1996
            E +PL SK Q NGST  +KQ KSS+VP KR I+                D     KVKQV
Sbjct: 199  EIRPLPSKSQLNGSTKNDKQQKSSVVPTKRPIDNNIPSNHSSAKKPKLLDACTTTKVKQV 258

Query: 1995 TVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1816
            TVK E+K DDDDH+ I+QR+KK+  S  KS                              
Sbjct: 259  TVKVEQKADDDDHLTISQRMKKADSSANKSSFAKKKVTKVVSSSLKKTTQKNNKQMKNSK 318

Query: 1815 XXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFA 1636
               STK+ PGS DGQKKWTTLVHNGVIFPPPY PHGVK+LYK K V+LTPEQEEVATMFA
Sbjct: 319  YSKSTKVQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKILYKGKPVDLTPEQEEVATMFA 378

Query: 1635 VMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXX 1456
            VM +TDY+QKP+F +NFWNDWR+LLGKNHVIQ L+DCDFNPIY+WH              
Sbjct: 379  VMKDTDYVQKPQFLQNFWNDWRKLLGKNHVIQKLDDCDFNPIYEWHQQEKEKKKQMSTEE 438

Query: 1455 XXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDIT 1276
                         KYMWA V+ VKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDIT
Sbjct: 439  KKVLKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDIT 498

Query: 1275 INIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDK 1096
            INIGKDAPIPECPIPGE WKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSDK
Sbjct: 499  INIGKDAPIPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK 558

Query: 1095 EKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTV 916
            EKYEKARKLKDYIH+IR AYTKDF SKD+T+RQIAVATYLIDKLALRAGNEKDDDEADTV
Sbjct: 559  EKYEKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTV 618

Query: 915  GCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDK 736
            GCCTLKV NVECIPPNKLKFDFLGKDS++Y NTVEVELPVYKAIG FQ  KKQ DDLFD 
Sbjct: 619  GCCTLKVANVECIPPNKLKFDFLGKDSMRYENTVEVELPVYKAIGHFQVAKKQTDDLFDS 678

Query: 735  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAI 556
            LDT+KLNAHLKELMPGLTAKVFRTYNASITLD+ L   T DG+VAEKI +Y +ANK+VAI
Sbjct: 679  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAI 738

Query: 555  ICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNLTP 376
            ICNHQRT+SKSH AQMSRLTEKIEE            DRAKKG+PPLK +DGK KR+LTP
Sbjct: 739  ICNHQRTISKSHDAQMSRLTEKIEELKSTLKELKTDLDRAKKGRPPLKGADGKQKRSLTP 798

Query: 375  EALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 196
            EA+E+KIA TN +IEKME  M+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI+KIF
Sbjct: 799  EAIEKKIATTNQRIEKMEMAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIDKIF 858

Query: 195  NKSLLAKFAWSMDVDPEFRF 136
            NKSLLAKF W+MDVDP+FRF
Sbjct: 859  NKSLLAKFTWAMDVDPQFRF 878


>ref|XP_011007608.1| PREDICTED: DNA topoisomerase 1-like [Populus euphratica]
            gi|743926876|ref|XP_011007609.1| PREDICTED: DNA
            topoisomerase 1-like [Populus euphratica]
            gi|743926879|ref|XP_011007610.1| PREDICTED: DNA
            topoisomerase 1-like [Populus euphratica]
          Length = 873

 Score = 1032 bits (2669), Expect = 0.0
 Identities = 556/860 (64%), Positives = 612/860 (71%), Gaps = 4/860 (0%)
 Frame = -3

Query: 2703 ALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2524
            A PVKSP  S KAS SSAK  P+                                     
Sbjct: 72   ASPVKSPIGSPKASASSAKVSPMKP----------------------------------- 96

Query: 2523 XXSPVANSKESSPLDDQLKQSPQQNALAAVKEEE---IKDENGLXXXXXXXXXXKPLSAR 2353
               PV  S+  S   DQ KQ  +Q    AVKEE    + D++            KPLS+R
Sbjct: 97   ---PVTYSRVPSSSIDQSKQVSKQVVSNAVKEETKPIVDDDDS--------EDDKPLSSR 145

Query: 2352 LKGNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDSD 2176
             KG+TNN N+G+       A  K     D    DDEVPLSSRF+ K NAG+SS + + S 
Sbjct: 146  FKGSTNNANKGVTVP----ACVK-----DEHSDDDEVPLSSRFAAKSNAGSSSCKTLSSS 196

Query: 2175 EKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQV 1996
            EKK   SK+Q NGST ++KQ KSS VP KR ++               SD S     KQV
Sbjct: 197  EKKLFVSKIQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQSFAKKPKLSDLST---TKQV 253

Query: 1995 TVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1816
            TVKAE K DDDDH+ I+QR+KK++ S  KS++                            
Sbjct: 254  TVKAELKADDDDHLTISQRMKKASSSSNKSLSVKQKVTKVVSLSFKKTTKNNKKQMKNSK 313

Query: 1815 XXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFA 1636
               STK+ PGS DGQKKWTTLVHNGVIFPPPY PHGVKMLYK K V+LTPEQEEVATMFA
Sbjct: 314  YSKSTKLQPGSSDGQKKWTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFA 373

Query: 1635 VMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXX 1456
            VM +T+Y+QKP+F +NFWNDWR LLGKNHVIQ LE CDFNPIY+WH              
Sbjct: 374  VMKDTEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMSTEE 433

Query: 1455 XXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDIT 1276
                         KYMWA V+ VKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDIT
Sbjct: 434  KKAMREEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDIT 493

Query: 1275 INIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDK 1096
            INIGKDAPIP+CPIPGESWKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSDK
Sbjct: 494  INIGKDAPIPKCPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK 553

Query: 1095 EKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTV 916
            EKYEKARKLKDYIH+IR AYTKDF SKD+T+RQIAVATYLIDKLALRAGNEKDDDEADTV
Sbjct: 554  EKYEKARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTV 613

Query: 915  GCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDK 736
            GCCTLKV NVECIPPNKLKFDFLGKDSI+Y NTVEVELPVYKAI QFQ  KK  DDLF+ 
Sbjct: 614  GCCTLKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFNS 673

Query: 735  LDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAI 556
            LDT+KLNAHLKELMPGLTAKVFRTYNASITLD+ L   T DG+VAEKI +Y +ANK+VAI
Sbjct: 674  LDTSKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKIVIYNQANKQVAI 733

Query: 555  ICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNLTP 376
            ICNHQRT+SKSH AQMSRLTEK+EE            DRAK+GKPPLKD+DGK KRNLTP
Sbjct: 734  ICNHQRTISKSHDAQMSRLTEKLEELKGALKEFKTDLDRAKRGKPPLKDADGKQKRNLTP 793

Query: 375  EALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 196
            EA+E+KIA TN KIEKME  M+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF
Sbjct: 794  EAIEKKIATTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 853

Query: 195  NKSLLAKFAWSMDVDPEFRF 136
            NKSLLAKF W+MDVDP+FRF
Sbjct: 854  NKSLLAKFTWAMDVDPQFRF 873


>ref|XP_002317355.1| DNA topoisomerase family protein [Populus trichocarpa]
            gi|222860420|gb|EEE97967.1| DNA topoisomerase family
            protein [Populus trichocarpa]
          Length = 860

 Score = 1022 bits (2643), Expect = 0.0
 Identities = 536/796 (67%), Positives = 595/796 (74%), Gaps = 5/796 (0%)
 Frame = -3

Query: 2508 ANSKESSPLDDQLKQSPQQNALAAVKEEE---IKDENGLXXXXXXXXXXKPLSARLKGNT 2338
            A+S ++SP+   +  S   ++  AVKEE    + D++            KPLS+R KG+T
Sbjct: 86   ASSAKASPMKPPVTYSRVPSSSIAVKEETKPIVDDDDS--------EDDKPLSSRFKGST 137

Query: 2337 NNGNQGLGASKPDAAIFKVNVKTDPEYSDD-EVPLSSRFS-KLNAGTSSARHIDSDEKKP 2164
            NN N+G+           V  +   E+SDD EVPLSSRF+ K NAG+SS + I S EK  
Sbjct: 138  NNANKGV----------TVPARVKDEHSDDDEVPLSSRFAAKSNAGSSSCKTISSSEKIL 187

Query: 2163 LASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQVTVKA 1984
            L SK+Q NGST ++KQ KSS VP KR ++               SD S     KQVTVKA
Sbjct: 188  LVSKIQLNGSTAKDKQQKSSAVPTKRPMDNKVPSNQSFAKKPKLSDAST---TKQVTVKA 244

Query: 1983 EEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS 1804
            E K DDDDH+ I+QR+KK++ S  KS++                               S
Sbjct: 245  ELKADDDDHLTISQRMKKASSSSNKSLSVKQNVTKVVSFSSKKTTKNNKKQMQNSKYSKS 304

Query: 1803 TKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFAVMLE 1624
            TK+ PGS DGQKKW TLVHNGVIFPPPY PHGVKMLYK K V+LTPEQEEVATMFAVM +
Sbjct: 305  TKVQPGSSDGQKKWKTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATMFAVMKD 364

Query: 1623 TDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXXXXXX 1444
            T+Y+QKP+F +NFWNDWR LLGKNHVIQ LE CDFNPIY+WH                  
Sbjct: 365  TEYVQKPQFLQNFWNDWRTLLGKNHVIQKLEACDFNPIYEWHQKEKEKKKQMSTEEKKAV 424

Query: 1443 XXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIG 1264
                      YMWA V+ VKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITINIG
Sbjct: 425  REEKLKQEEMYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKSRIRPSDITINIG 484

Query: 1263 KDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDKEKYE 1084
            KDAPIP+CPIPGE WKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSDKEKYE
Sbjct: 485  KDAPIPKCPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDKEKYE 544

Query: 1083 KARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 904
            KARKLKDYIH+IR AYTKDF SKD+T+RQIAVATYLIDKLALRAGNEKDDDEADTVGCCT
Sbjct: 545  KARKLKDYIHNIRTAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEADTVGCCT 604

Query: 903  LKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTA 724
            LKV NVECIPPNKLKFDFLGKDSI+Y NTVEVELPVYKAI QFQ  KK  DDLFD LDT+
Sbjct: 605  LKVANVECIPPNKLKFDFLGKDSIRYENTVEVELPVYKAIRQFQVAKKPTDDLFDSLDTS 664

Query: 723  KLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAIICNH 544
            KLNAHLKELMPGLTAKVFRTYNASITLD+ L   T DG+VAEK  +Y +ANK+VAIICNH
Sbjct: 665  KLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKFVIYNQANKQVAIICNH 724

Query: 543  QRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNLTPEALE 364
            QRT+SKSH AQMSRLTEK+EE            DRAKKGKPPLKD+DGK KRNLTPEA+E
Sbjct: 725  QRTISKSHDAQMSRLTEKLEELKGTLKEFKTDLDRAKKGKPPLKDADGKQKRNLTPEAIE 784

Query: 363  RKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL 184
            +KIA TN KIEKME  M+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL
Sbjct: 785  KKIATTNQKIEKMELSMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSL 844

Query: 183  LAKFAWSMDVDPEFRF 136
            LAKF W+MDVDP+FRF
Sbjct: 845  LAKFTWAMDVDPQFRF 860


>ref|XP_002529020.1| DNA topoisomerase type I, putative [Ricinus communis]
            gi|223531500|gb|EEF33331.1| DNA topoisomerase type I,
            putative [Ricinus communis]
          Length = 891

 Score = 1022 bits (2642), Expect = 0.0
 Identities = 555/869 (63%), Positives = 611/869 (70%), Gaps = 12/869 (1%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            KA PVKSP  S KASTSSAKA P+                                    
Sbjct: 72   KASPVKSPIGSPKASTSSAKASPLRS---------------------------------- 97

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKE----------EEIKDENGLXXXXXXXX 2377
                PVANSK SS LD+QLKQ+ +QNA   VK+          + +K E           
Sbjct: 98   ----PVANSKGSSSLDEQLKQASKQNASNVVKDVSSAKPEIGLKSVKHETKSNGDDEDSE 153

Query: 2376 XXKPLSARLKGNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTS 2200
               PLSAR KGNTNN ++ + A K         VK D +  DD+VPL SRF  K  AGTS
Sbjct: 154  DDLPLSARRKGNTNNVSKVVTAPK--------RVK-DEDSDDDKVPLCSRFPMKSTAGTS 204

Query: 2199 SARHIDSDEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTS 2020
              +  +  EKKPL SKVQQNGST ++KQ K+ L+P KR ++               S  S
Sbjct: 205  GNKPNNISEKKPLPSKVQQNGSTSKDKQQKAPLIPTKRPLDKANSSEQSSIKKPKLSAGS 264

Query: 2019 KEVKVKQVTVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXX 1840
               KVKQ TVKAEE D DD  IPIAQR K    S+ K  +                    
Sbjct: 265  TITKVKQATVKAEEDDPDD--IPIAQRKKSLGSSESKLSSAKQKAIKVVSSSFKKPIKKN 322

Query: 1839 XXXXXXXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQ 1660
                       STK+ P S DGQKKWTTL+HNGVIFPPPY PHG+K+LYK + V+L PEQ
Sbjct: 323  KKQMKNTKYSKSTKVQPSSTDGQKKWTTLIHNGVIFPPPYKPHGIKILYKGRPVDLAPEQ 382

Query: 1659 EEVATMFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXX 1480
            EEVATMFAVM +TDYMQKPKF ENFWNDWR+LLG+NHVIQ LEDCDF PIY+WH      
Sbjct: 383  EEVATMFAVMKDTDYMQKPKFLENFWNDWRKLLGRNHVIQKLEDCDFTPIYEWHEREKEK 442

Query: 1479 XXXXXXXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKK 1300
                                 KYMWA VD VKEKVGNFRVEPP LFRGRGEHPKMGKLKK
Sbjct: 443  KKQMSTEEKKAQKEEKLRQEEKYMWAIVDGVKEKVGNFRVEPPALFRGRGEHPKMGKLKK 502

Query: 1299 RIRPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASS 1120
            RI+PSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWND INPKEFKYVFLAASS
Sbjct: 503  RIQPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASS 562

Query: 1119 SLKGQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEK 940
            SLKGQSDKEKYEKARKLKDYIH+IRAAY KD  SKD+T++QIAVATYLIDKLALRAGNEK
Sbjct: 563  SLKGQSDKEKYEKARKLKDYIHNIRAAYQKDLRSKDITKKQIAVATYLIDKLALRAGNEK 622

Query: 939  DDDEADTVGCCTLKVGNVECIPPN-KLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGK 763
            DDDEADTVGCCTLKV NVECIP +  LKFDFLGKDSI+Y NTVEV+  VY+AIG FQ GK
Sbjct: 623  DDDEADTVGCCTLKVANVECIPGSFNLKFDFLGKDSIRYENTVEVKPEVYEAIGTFQKGK 682

Query: 762  KQNDDLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVY 583
            KQ DDLFDKLDT KLNAHLKELMPGLTAKVFRTYNASITLD+ L   T DG+VAEK+ +Y
Sbjct: 683  KQTDDLFDKLDTTKLNAHLKELMPGLTAKVFRTYNASITLDEKLYEETEDGDVAEKVVIY 742

Query: 582  QRANKEVAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSD 403
            QRANKEVAIICNHQRT+SKSH AQMS+L EKIEE            DRAKKGKPPLKD+D
Sbjct: 743  QRANKEVAIICNHQRTISKSHGAQMSKLIEKIEELKATLKELKTDLDRAKKGKPPLKDAD 802

Query: 402  GKGKRNLTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKR 223
            GK KRNL+PE +E+KIA TN +IEKME +M+TKEDLKTVALGTSKINYLDPRITVAWCKR
Sbjct: 803  GKQKRNLSPENIEKKIASTNQRIEKMELNMKTKEDLKTVALGTSKINYLDPRITVAWCKR 862

Query: 222  HEVPIEKIFNKSLLAKFAWSMDVDPEFRF 136
            HEVPIEKIFNKSLLAKF W+MDVDP+FRF
Sbjct: 863  HEVPIEKIFNKSLLAKFTWAMDVDPQFRF 891


>ref|XP_008449103.1| PREDICTED: DNA topoisomerase 1-like [Cucumis melo]
            gi|659096453|ref|XP_008449104.1| PREDICTED: DNA
            topoisomerase 1-like [Cucumis melo]
          Length = 889

 Score = 1004 bits (2597), Expect = 0.0
 Identities = 532/789 (67%), Positives = 589/789 (74%), Gaps = 8/789 (1%)
 Frame = -3

Query: 2478 DQLKQSPQQNALAAVKEEEIK----DENGLXXXXXXXXXXKPLSARLKGNTNNGNQGLGA 2311
            D +   P+    AAVKEE +      EN            KPLS RLKGN+N  N+GL +
Sbjct: 112  DSMDSRPKNLVNAAVKEENVSINPSQENS------DSEDDKPLSIRLKGNSNQPNKGLVS 165

Query: 2310 SKPDAAIFKVNVKTDPEYSDDEVPLSSRFSKLNA-GTSSARHIDSDEKKPLASKVQQNGS 2134
            + P     K  VK     SDDEVPLSS+F   +A G   ++ +  DEKKPL  KV QNGS
Sbjct: 166  TIP-----KNKVKKSSGDSDDEVPLSSKFQMKHASGPMGSKQLGFDEKKPLVPKVHQNGS 220

Query: 2133 TLREKQLKSSLVPVKRHI--EXXXXXXXXXXXXXXXSDTSKEVKVKQVTVKA-EEKDDDD 1963
            T R+K  K +++  KR +  E               SD+S  +  K V++KA +E DDDD
Sbjct: 221  TSRDKLQKPAVLSSKRPLPNEDSHSPSQFSTKKPKLSDSSSPLSSKLVSLKAKQEVDDDD 280

Query: 1962 DHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTKMLPGS 1783
            D IPI+QR+KK+  +  KS +                               STK+LP +
Sbjct: 281  DDIPISQRLKKTPATVNKSSSSKPTVSKVVSSSIKKTFKKSKKPVKKSKYVKSTKLLPSA 340

Query: 1782 GDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFAVMLETDYMQKP 1603
            GDGQKKWTTLVHNGVIFPPPY  HGVKMLYK K V+LTP+QEEVATMFAVM +TDYM KP
Sbjct: 341  GDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLTPQQEEVATMFAVMKDTDYMLKP 400

Query: 1602 KFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXXXXXXXXXXXXX 1423
            KF+ENFWNDWR+LLGKNHVIQNL+DCDF PIYDW+                         
Sbjct: 401  KFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQMEKEKKKQMTTEEKKALKEEKLKQ 460

Query: 1422 XXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITINIGKDAPIPE 1243
              KYMWA +D VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRPSDITINIGK APIPE
Sbjct: 461  EEKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRPSDITINIGKGAPIPE 520

Query: 1242 CPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDKEKYEKARKLKD 1063
            CPIPGE WKEV+HDNTVTWLAFWND IN KEFKYVFLAASSSLKGQSDKEKYEKAR LKD
Sbjct: 521  CPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLAASSSLKGQSDKEKYEKARVLKD 580

Query: 1062 YIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVGNVE 883
            YI +IR AYTKDF SKD TRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKV NV+
Sbjct: 581  YIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAGNEKDDDEADTVGCCTLKVENVK 640

Query: 882  CIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKLDTAKLNAHLK 703
             +PPN L+F+FLGKDSI+Y NTVEVELPV+KAI QFQ+GK   DDLFDKLDT KLNAHLK
Sbjct: 641  AVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQSGKSGTDDLFDKLDTNKLNAHLK 700

Query: 702  ELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEVAIICNHQRTVSKS 523
            +LMPGLTAKVFRTYNASITLDDMLNRGT+DGEV+EKI  YQ ANKEVAIICNHQRTVSKS
Sbjct: 701  DLMPGLTAKVFRTYNASITLDDMLNRGTKDGEVSEKIVTYQHANKEVAIICNHQRTVSKS 760

Query: 522  HTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNLTPEALERKIAQTN 343
            H AQM+RL EKI E            DRAKKGKPPLK SDGK KRNLTPEALE+KI+QTN
Sbjct: 761  HGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKGSDGKQKRNLTPEALEKKISQTN 820

Query: 342  AKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWS 163
            AKIEK+ERDM+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAW+
Sbjct: 821  AKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIFNKSLLAKFAWA 880

Query: 162  MDVDPEFRF 136
            MDVDP+FRF
Sbjct: 881  MDVDPDFRF 889


>ref|XP_012070937.1| PREDICTED: DNA topoisomerase 1 [Jatropha curcas]
            gi|802588530|ref|XP_012070938.1| PREDICTED: DNA
            topoisomerase 1 [Jatropha curcas]
          Length = 877

 Score = 1001 bits (2589), Expect = 0.0
 Identities = 540/860 (62%), Positives = 602/860 (70%), Gaps = 3/860 (0%)
 Frame = -3

Query: 2706 KALPVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2527
            KA PVKSP  S KASTS+AK   V                                    
Sbjct: 72   KASPVKSPIGSPKASTSTAKPSQVKS---------------------------------- 97

Query: 2526 XXXSPVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARLK 2347
                PVAN K SS   +QLKQ+ +QN    VK+E    ++             PLS++LK
Sbjct: 98   ----PVANLKASSFSGEQLKQTSKQNVANVVKQEVSTVKHKTEPNSEDSEDDLPLSSKLK 153

Query: 2346 GNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRF-SKLNAGTSSARHIDSDEK 2170
            GN+NN               K     D +  DD +PLSSRF +K NAGTS ++  +  EK
Sbjct: 154  GNSNN--------------VKEVKNEDSDDDDDNIPLSSRFPAKSNAGTSGSKPNNFSEK 199

Query: 2169 KPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQVTV 1990
            KPLASK+QQNGS  ++KQ K S+VP KR ++               SD S  +K+KQVTV
Sbjct: 200  KPLASKIQQNGSITKDKQQKMSMVPSKRPMDKANSSDQSSAKKPKISDASTAMKIKQVTV 259

Query: 1989 KAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1810
            KAEE  D +D++PI+ R+KKS   D K ++                              
Sbjct: 260  KAEE--DGNDNVPISLRLKKSGSLDSKLLSAKQKTTKVVSSSFKKTNKKNKKQMKNTKYS 317

Query: 1809 XSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATMFAVM 1630
             STK+ P S DGQKKWTTLVHNGVIFPPPY PHG+K+ YK + V+LTPEQEEVATMFAVM
Sbjct: 318  KSTKVQPNSTDGQKKWTTLVHNGVIFPPPYKPHGIKIRYKGQPVDLTPEQEEVATMFAVM 377

Query: 1629 LETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXXXXXX 1450
             +TDYMQKPKF ENFWNDWR+LLGKNH+IQ LEDCDF PIY WH                
Sbjct: 378  KDTDYMQKPKFLENFWNDWRKLLGKNHIIQKLEDCDFTPIYQWHQQEKEKKKQMSTEEKK 437

Query: 1449 XXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSDITIN 1270
                       KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK RIRPSDITIN
Sbjct: 438  ALKEDKLKQEEKYMWAVVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKNRIRPSDITIN 497

Query: 1269 IGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQSDKEK 1090
            IGKDAPIPECPIPGESWKE+KHDNTVTWLAFWND INPKEFKYVFLAASSSLKGQSD+EK
Sbjct: 498  IGKDAPIPECPIPGESWKEIKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDREK 557

Query: 1089 YEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEADTVGC 910
            YEKAR LK++I +IRAAY KDF SKDVT++QIAVATYLIDKLALRAGNEKDDDEADTVGC
Sbjct: 558  YEKARMLKNFIDNIRAAYQKDFKSKDVTKKQIAVATYLIDKLALRAGNEKDDDEADTVGC 617

Query: 909  CTLKVGNVECIPPN-KLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLFDKL 733
            CTLKV NVECIP +  LKFDFLGKDSI+Y NTVEV+  VY AIG FQ GKKQ DDLFDKL
Sbjct: 618  CTLKVANVECIPGSYNLKFDFLGKDSIRYENTVEVKPEVYDAIGTFQKGKKQTDDLFDKL 677

Query: 732  DTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRD-GEVAEKIEVYQRANKEVAI 556
            DT KLNAHLKELMPGLTAKVFRTYNASITLD  L   T D G++AEK+ +Y RANKEVAI
Sbjct: 678  DTTKLNAHLKELMPGLTAKVFRTYNASITLDGKLYEETEDGGDLAEKVIIYNRANKEVAI 737

Query: 555  ICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNLTP 376
            ICNHQRT+SKSH AQMS+LTEKIEE            DRAKKGKPPLK  DGK KRNL+P
Sbjct: 738  ICNHQRTISKSHDAQMSKLTEKIEELKSTIKELKTDLDRAKKGKPPLKGPDGKQKRNLSP 797

Query: 375  EALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 196
            +A+E+KIA TN KIEKME  M+TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF
Sbjct: 798  DAIEKKIASTNQKIEKMELAMKTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEKIF 857

Query: 195  NKSLLAKFAWSMDVDPEFRF 136
            NKSLLAKF W+MDVDP+FRF
Sbjct: 858  NKSLLAKFTWAMDVDPQFRF 877


>dbj|BAG31376.1| topoisomerase I [Camptotheca acuminata]
          Length = 894

 Score =  993 bits (2568), Expect = 0.0
 Identities = 533/802 (66%), Positives = 590/802 (73%), Gaps = 9/802 (1%)
 Frame = -3

Query: 2514 PVANSKESSPLDDQLKQSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARL----- 2350
            PVAN K SS  DD+ K S +QN +  VKEE+ +  N            KPLSARL     
Sbjct: 97   PVANPKVSSSSDDRSKHSSKQNTINVVKEEK-ELVNPAAEPYGDSEDEKPLSARLFTGLT 155

Query: 2349 KGNTNNGNQGLGASKPDAA-IFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDSD 2176
            KG++NN N+GL  S P +  + K  +    + SDDE+PLSS+F  K NAGTS+ +  +SD
Sbjct: 156  KGSSNNANKGLINSSPASLPVPKPEINRYSDDSDDEIPLSSKFRLKANAGTSTVKSYESD 215

Query: 2175 EKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQV 1996
            + K L S  QQNGS  R    KSS+   KR +                SD S  V  KQ 
Sbjct: 216  DNKTLVSNFQQNGSINRGS--KSSIKVNKRPLGEVKSSVQSSVKKPKLSDASTPVNNKQA 273

Query: 1995 TVKAEEK--DDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1822
            + KAE K  D DDDH+PI+QR+KKSA S  KS T                          
Sbjct: 274  SKKAEPKADDSDDDHVPISQRMKKSATSGNKSSTAKQKVTKVVSSSMKKASKKFKKVVKK 333

Query: 1821 XXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATM 1642
                 S+K+ P SG+G KKW TLVHNGVIFPPPY PHGVKMLYK K V+LTPEQEEVATM
Sbjct: 334  SKYSKSSKVPPSSGEG-KKWNTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM 392

Query: 1641 FAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXX 1462
            FAVML+TDYM K KF+ENF +DWR++LGKNHVIQNLEDCDF PIY+WH            
Sbjct: 393  FAVMLDTDYMTKSKFKENFMDDWRKILGKNHVIQNLEDCDFTPIYEWHQREKEKKKKMTA 452

Query: 1461 XXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1282
                           KYMWA V+ VKEKVGNFRVEPP LFRGRGEHPKMGKLKK IRPSD
Sbjct: 453  EEKKVLKEERLKQEEKYMWAIVNGVKEKVGNFRVEPPSLFRGRGEHPKMGKLKKCIRPSD 512

Query: 1281 ITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQS 1102
            ITINIGKDAPIPECPIPGESWKE++HDNTVTWLAFWND I P+EFKYVFLAASSSLKGQS
Sbjct: 513  ITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAFWNDPIKPREFKYVFLAASSSLKGQS 572

Query: 1101 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD 922
            DKEKYEKAR LKD+I  IRAAYTKDF SKD+T+RQIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 573  DKEKYEKARLLKDFIQGIRAAYTKDFASKDITKRQIAVATYLIDKLALRAGNEKDDDEAD 632

Query: 921  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLF 742
            TVGCCTLKV NVE  PP+ LKFDFLGKDSI+Y N VEVELPVYKAI QF+TGK+  DDLF
Sbjct: 633  TVGCCTLKVENVEPKPPSILKFDFLGKDSIRYQNEVEVELPVYKAIQQFRTGKRGGDDLF 692

Query: 741  DKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEV 562
            DKLDT+KLNAHLK LMPGLTAKVFRTYNASITLD+ML+R T+ G VAEKI VYQ ANKEV
Sbjct: 693  DKLDTSKLNAHLKGLMPGLTAKVFRTYNASITLDEMLSRETKGGNVAEKIVVYQHANKEV 752

Query: 561  AIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNL 382
            AIICNHQRTVSKSH AQM+RL  KI+E             RAKKGKPPL+D+DGK KRNL
Sbjct: 753  AIICNHQRTVSKSHPAQMTRLNGKIDELKGILDGLQTDLARAKKGKPPLEDADGKPKRNL 812

Query: 381  TPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 202
            TPEALERKI QTNAKIEKMERD +TKE LKT+ALGTSKI+YLDPRITVAWCKRHEVPIEK
Sbjct: 813  TPEALERKIGQTNAKIEKMERDKETKEGLKTIALGTSKISYLDPRITVAWCKRHEVPIEK 872

Query: 201  IFNKSLLAKFAWSMDVDPEFRF 136
            +FNKSLLAKFAWSMDVDP FRF
Sbjct: 873  VFNKSLLAKFAWSMDVDPSFRF 894


>ref|XP_004149585.1| PREDICTED: DNA topoisomerase 1-like [Cucumis sativus]
            gi|778675953|ref|XP_011650506.1| PREDICTED: DNA
            topoisomerase 1-like [Cucumis sativus]
            gi|700200935|gb|KGN56068.1| hypothetical protein
            Csa_3G063680 [Cucumis sativus]
          Length = 889

 Score =  993 bits (2567), Expect = 0.0
 Identities = 532/811 (65%), Positives = 592/811 (72%), Gaps = 22/811 (2%)
 Frame = -3

Query: 2502 SKESSPLDDQLKQS--------------PQQNALAAVKEEEIK----DENGLXXXXXXXX 2377
            +  SSP+ + L +S              P+    A VKEE +      EN          
Sbjct: 90   ASRSSPIPEPLTKSLGTSLKASHSMDSRPKSLVNAVVKEENVSINPSQENS------DSE 143

Query: 2376 XXKPLSARLKGNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFSKLNA-GTS 2200
              KPLS RLKGN N  N+GL ++ P     K  VK     SDDEVPLSS+F   +A G  
Sbjct: 144  DDKPLSIRLKGNPNQPNKGLVSTVP-----KNKVKKSLADSDDEVPLSSKFQMKHASGVL 198

Query: 2199 SARHIDSDEKKPLASKVQQNGSTLREKQLKSSLVPVKRHI--EXXXXXXXXXXXXXXXSD 2026
             ++    DEKKPL  KV QNGST R+K  K +++  KR +  E               +D
Sbjct: 199  GSKQHGFDEKKPLVPKVHQNGSTSRDKLQKPAVLSSKRPLPNEDSHSPSQFPTKKPKLTD 258

Query: 2025 TSKEVKVKQVTVKA-EEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXX 1849
            +S  +  K V++KA +E DDDDD IPI+QR+KK + +  KS +                 
Sbjct: 259  SSSPLNSKLVSLKAKQEVDDDDDDIPISQRMKKVSATVNKSSSSKPTISKVVSSSIKKTF 318

Query: 1848 XXXXXXXXXXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLT 1669
                          STK+LP +GDGQKKWTTLVHNGVIFPPPY  HGVKMLYK K V+LT
Sbjct: 319  KKSKKPVKKSKYVKSTKLLPSAGDGQKKWTTLVHNGVIFPPPYQTHGVKMLYKGKPVDLT 378

Query: 1668 PEQEEVATMFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXX 1489
            P QEEVATMFAVM +TDYM KPKF+ENFWNDWR+LLGKNHVIQNL+DCDF PIYDW+   
Sbjct: 379  PPQEEVATMFAVMKDTDYMLKPKFKENFWNDWRKLLGKNHVIQNLDDCDFTPIYDWYQME 438

Query: 1488 XXXXXXXXXXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGK 1309
                                    KYMWA +D VKEKVGNFRVEPPGLFRGRGEHPKMGK
Sbjct: 439  KEKKKQMTTEEKKAVKEEKLKQEEKYMWAILDGVKEKVGNFRVEPPGLFRGRGEHPKMGK 498

Query: 1308 LKKRIRPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLA 1129
            LK+RI PSDITINIGK APIPECPIPGE WKEV+HDNTVTWLAFWND IN KEFKYVFLA
Sbjct: 499  LKRRICPSDITINIGKGAPIPECPIPGERWKEVRHDNTVTWLAFWNDPINQKEFKYVFLA 558

Query: 1128 ASSSLKGQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAG 949
            ASSSLKGQSDKEKYEKAR LKDYI +IR AYTKDF SKD TRRQIAVATYLIDKLALRAG
Sbjct: 559  ASSSLKGQSDKEKYEKARMLKDYIKNIRNAYTKDFTSKDPTRRQIAVATYLIDKLALRAG 618

Query: 948  NEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQT 769
            NEKDDDEADTVGCCTLKV NV+ +PPN L+F+FLGKDSI+Y NTVEVELPV+KAI QFQ+
Sbjct: 619  NEKDDDEADTVGCCTLKVENVKAVPPNLLEFNFLGKDSIRYENTVEVELPVFKAITQFQS 678

Query: 768  GKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIE 589
            GK   DDLFDKLDT+KLNAHLK+LMPGLTAKVFRTYNASITLDDMLNRGT++GEV+EKI 
Sbjct: 679  GKSGTDDLFDKLDTSKLNAHLKDLMPGLTAKVFRTYNASITLDDMLNRGTKNGEVSEKIV 738

Query: 588  VYQRANKEVAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKD 409
             YQ ANKEVAIICNHQRTVSKSH AQM+RL EKI E            DRAKKGKPPLK 
Sbjct: 739  TYQHANKEVAIICNHQRTVSKSHGAQMTRLNEKISELRDILKELKIDLDRAKKGKPPLKG 798

Query: 408  SDGKGKRNLTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWC 229
            SDGK KRNLTPEALE+KI+QTNAKIEK+ERDM+TKEDLKTVALGTSKINYLDPRITVAWC
Sbjct: 799  SDGKQKRNLTPEALEKKISQTNAKIEKIERDMKTKEDLKTVALGTSKINYLDPRITVAWC 858

Query: 228  KRHEVPIEKIFNKSLLAKFAWSMDVDPEFRF 136
            KRHEVPIEKIFNKSLLAKFAW+MDVDP+FRF
Sbjct: 859  KRHEVPIEKIFNKSLLAKFAWAMDVDPDFRF 889


>ref|XP_011093631.1| PREDICTED: DNA topoisomerase 1-like [Sesamum indicum]
          Length = 893

 Score =  973 bits (2516), Expect = 0.0
 Identities = 531/862 (61%), Positives = 604/862 (70%), Gaps = 8/862 (0%)
 Frame = -3

Query: 2697 PVKSPPPSQKASTSSAKALPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 2518
            P++SP  S K+S SSAKAL V                                       
Sbjct: 82   PLRSPLASPKSSNSSAKALAVRPREVDPRPS----------------------------- 112

Query: 2517 SPVANSKESSPLDDQLK-QSPQQNALAAVKEEEIKDENGLXXXXXXXXXXKPLSARL--- 2350
               + + ES+ +  Q+K + P   A   + E+    E+            KPLSARL   
Sbjct: 113  --TSVTDESNSVKHQIKDEKPSTKATGGLNEDSEDSEDD-----------KPLSARLPAG 159

Query: 2349 --KGNTNNGNQGLGASKPDAAIFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDS 2179
              K N+N+ N+G  A     ++ K  +   PE SDDE+PLSS+F  K NAG S+ R   S
Sbjct: 160  LSKVNSNHANKGPNAL---TSVQKTKIPK-PEDSDDEIPLSSKFQVKSNAGESTNRPSIS 215

Query: 2178 DEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQ 1999
             E+KPL +K  QNGS   E+  K S +  KR  +               SD S   K K+
Sbjct: 216  GERKPLLAKYDQNGSASAER--KPSTILKKRPADGVKSAGESYLKKPKLSDASTPNKTKE 273

Query: 1998 VTVKAEEKDDDD-DHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXXXX 1822
             ++K E KD+DD DH+PI+QRIK+   SD KS +                          
Sbjct: 274  TSIKDEMKDEDDEDHVPISQRIKQQTSSDKKS-SSAKNMTKPISASAKKTSKKPKKVMKN 332

Query: 1821 XXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVATM 1642
                 S+K+ P SG+GQK WTTLVHNGVIFPPPY PHGVKMLYK K V+LTPEQEEVATM
Sbjct: 333  SKYSKSSKVPPSSGEGQK-WTTLVHNGVIFPPPYKPHGVKMLYKGKPVDLTPEQEEVATM 391

Query: 1641 FAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXXXX 1462
            +AVML+TDYM KPKF+ENF  DWR++LGKNHVIQ+LE CDF PIY+WH            
Sbjct: 392  YAVMLDTDYMNKPKFKENFMADWRKILGKNHVIQSLEHCDFTPIYEWHQKEKEKKKQMTA 451

Query: 1461 XXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 1282
                           KYMWA V+ VKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD
Sbjct: 452  EEKKALKEEKLKQEEKYMWAIVNGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPSD 511

Query: 1281 ITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKGQS 1102
            ITINIGKDAPIPECPIPGESWKE++HDNTVTWLA+WND INPKEFKYVFLAASS+LKGQS
Sbjct: 512  ITINIGKDAPIPECPIPGESWKEIRHDNTVTWLAYWNDPINPKEFKYVFLAASSTLKGQS 571

Query: 1101 DKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDEAD 922
            DKEKYEKAR LKDYIH IRAAYTKDF +KD T++QIAVATYLIDKLALRAGNEKDDDEAD
Sbjct: 572  DKEKYEKARLLKDYIHGIRAAYTKDFTNKDPTKKQIAVATYLIDKLALRAGNEKDDDEAD 631

Query: 921  TVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDDLF 742
            TVGCCTLKV NVE +PPN LKFDFLGKDSI+Y N VEVE PV+KAI QF++GKK +DD+F
Sbjct: 632  TVGCCTLKVENVEPVPPNILKFDFLGKDSIRYQNEVEVETPVFKAIQQFRSGKKGSDDMF 691

Query: 741  DKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANKEV 562
            D+LDT+KLNAHLKELMPGLTAKVFRTYNASITLDD L+R T+ G+VAEK+ VYQ ANKEV
Sbjct: 692  DRLDTSKLNAHLKELMPGLTAKVFRTYNASITLDDKLSRETKGGDVAEKVVVYQHANKEV 751

Query: 561  AIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKRNL 382
            AIICNHQRTVSKSH+AQM+RL EKIEE             RAKKGKPPLK +DGK KRNL
Sbjct: 752  AIICNHQRTVSKSHSAQMTRLNEKIEELKGVLEELQTDLARAKKGKPPLKSADGKPKRNL 811

Query: 381  TPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 202
             P+ALE+KIAQTNAKIEKMERD +TKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK
Sbjct: 812  NPDALEKKIAQTNAKIEKMERDKETKEDLKTVALGTSKINYLDPRITVAWCKRHEVPIEK 871

Query: 201  IFNKSLLAKFAWSMDVDPEFRF 136
            IFNKSLLAKFAW+MDVDP FRF
Sbjct: 872  IFNKSLLAKFAWAMDVDPSFRF 893


>ref|XP_010252639.1| PREDICTED: DNA topoisomerase 1-like [Nelumbo nucifera]
          Length = 883

 Score =  970 bits (2508), Expect = 0.0
 Identities = 516/804 (64%), Positives = 586/804 (72%), Gaps = 13/804 (1%)
 Frame = -3

Query: 2508 ANSKESSPLDDQLKQSPQQN-ALAAVKEEEI-KDENGLXXXXXXXXXXKPLSARL----- 2350
            A+S  S+ + D+ + SPQ+N A+  ++++++ K  NG           KPLS RL     
Sbjct: 86   ASSNASTSIADKSRCSPQKNLAINNMQKQQLNKPCNGPKEDPDDSDDDKPLSFRLATSGS 145

Query: 2349 --KGNTNNGNQGLGASKPDAAIF---KVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARH 2188
              K  +  G +G G+  P +      K+  K     S+DE+PLSS+F  K N G SS + 
Sbjct: 146  SLKIKSQPGTKGHGSPVPSSLQMDKTKITCKKSSADSEDEIPLSSKFQLKTNVG-SSVKK 204

Query: 2187 IDSDEKKPLASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVK 2008
             DSDE+KPL  K QQNGS+ ++ +L  SL  + +                     S   K
Sbjct: 205  YDSDEEKPLIFKFQQNGSSKKDNELSKSLKSLNKRPMSDVNTSGQSLVKKPKLSESIPAK 264

Query: 2007 VKQVTVKAEEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXXXXXXXXXXXXXXXXX 1828
            VKQ  +K+E K+DD+D+IPI+QR+KKSAPSD KS +                        
Sbjct: 265  VKQAPIKSEPKEDDEDNIPISQRLKKSAPSDNKSSSTKKTTTKVVSSSFKKTSKKLKKDK 324

Query: 1827 XXXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLYKRKEVNLTPEQEEVA 1648
                    TK+ P SG+GQK WTTL HNGVIFPPPY PHGVKMLY  + V+LTPEQEEVA
Sbjct: 325  YSKS----TKVPPSSGEGQK-WTTLEHNGVIFPPPYKPHGVKMLYNGQPVDLTPEQEEVA 379

Query: 1647 TMFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNPIYDWHXXXXXXXXXX 1468
            TMFAVM +T+Y  K KF ENF NDW+ +LGKNHVI+  E CDF PIY+WH          
Sbjct: 380  TMFAVMKDTEYATKQKFVENFMNDWKVILGKNHVIKKFELCDFTPIYEWHQREKEKKKQM 439

Query: 1467 XXXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRP 1288
                             KYMWA VD VKEKVGNFRVEPPGLFRGRGEHPKMGKLK+RIRP
Sbjct: 440  SAEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKRRIRP 499

Query: 1287 SDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPKEFKYVFLAASSSLKG 1108
            +DITINIGK AP+PECPIPGE WKEVKHDNTVTWLAFWND INPKEFKYVFLAASSSLKG
Sbjct: 500  NDITINIGKGAPVPECPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKG 559

Query: 1107 QSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLIDKLALRAGNEKDDDE 928
            QSDKEKYEKAR LKDYI  IRA YT+DF SKD+ +RQIAVATYLIDKLALRAGNEKDDDE
Sbjct: 560  QSDKEKYEKARLLKDYIKDIRANYTRDFSSKDIAKRQIAVATYLIDKLALRAGNEKDDDE 619

Query: 927  ADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVYKAIGQFQTGKKQNDD 748
            ADTVGCCTLKV NVE IPPNKL+FDFLGKDSI+Y NTVEVELPVYKAIGQF+ GKK+ +D
Sbjct: 620  ADTVGCCTLKVENVELIPPNKLQFDFLGKDSIRYFNTVEVELPVYKAIGQFKEGKKEGED 679

Query: 747  LFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRDGEVAEKIEVYQRANK 568
            LFDKLDT+KLNAHLKELMPGLTAKVFRTYNASITLD MLN+ T+DG+VAEKI VYQ ANK
Sbjct: 680  LFDKLDTSKLNAHLKELMPGLTAKVFRTYNASITLDGMLNKETKDGDVAEKITVYQHANK 739

Query: 567  EVAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAKKGKPPLKDSDGKGKR 388
            EVAIICNHQR+VSKSH+AQM+RL +KI+E             RAKKGKPPLK +DGK KR
Sbjct: 740  EVAIICNHQRSVSKSHSAQMNRLDDKIKELKELLDELKTDLARAKKGKPPLKGADGKPKR 799

Query: 387  NLTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLDPRITVAWCKRHEVPI 208
            NLTPEALERKIAQ NAKIEKMERD Q KEDLKTVALGTSKINYLDPRI+VAWCKRHEVPI
Sbjct: 800  NLTPEALERKIAQANAKIEKMERDKQIKEDLKTVALGTSKINYLDPRISVAWCKRHEVPI 859

Query: 207  EKIFNKSLLAKFAWSMDVDPEFRF 136
            EKIFNKSLLAKFAW+MDVDP FRF
Sbjct: 860  EKIFNKSLLAKFAWAMDVDPSFRF 883


>ref|XP_010545254.1| PREDICTED: DNA topoisomerase 1 [Tarenaya hassleriana]
            gi|729356539|ref|XP_010545255.1| PREDICTED: DNA
            topoisomerase 1 [Tarenaya hassleriana]
            gi|729356542|ref|XP_010545256.1| PREDICTED: DNA
            topoisomerase 1 [Tarenaya hassleriana]
          Length = 972

 Score =  969 bits (2504), Expect = 0.0
 Identities = 516/819 (63%), Positives = 582/819 (71%), Gaps = 42/819 (5%)
 Frame = -3

Query: 2466 QSPQQNALAAVKEEE---IKDENGLXXXXXXXXXXKPLSARLKGNTNNGNQGLGAS---- 2308
            +SP +N    V +E    +KD +            KPLSAR+KG++N  ++G  +S    
Sbjct: 160  KSPIRNDRVLVGKEGNRLLKDPSEFKCEEEDSDDDKPLSARVKGDSNQLSKGPSSSARGN 219

Query: 2307 ----------KPDAAIFKVNVKTDPEYSDDEVPLSSRFS-KLNAGTSSARHIDSDEKKPL 2161
                      +P       N+K   E  DDE P+SS+   K + G  S + I   +KK +
Sbjct: 220  SQLLVEKSSGRPPLVKLSRNIKN--EELDDEAPISSKVQIKTSVGALSKKPIQIQDKKSM 277

Query: 2160 ASKVQQNGSTLREKQLKSSLVPVKRHIEXXXXXXXXXXXXXXXSDTSKEVKVKQVTVKA- 1984
            A+K+ QNG T + +  ++S  P KR +E                D+S  VK KQ  VKA 
Sbjct: 278  ANKIHQNGFTPKSEG-RNSEAPAKRPLEKGSSSDQSFVKKPKLLDSSTSVKTKQGPVKAD 336

Query: 1983 -----------------------EEKDDDDDHIPIAQRIKKSAPSDIKSVTXXXXXXXXX 1873
                                   E+  DDDDH+PIA+R+K  + ++  S           
Sbjct: 337  VSDDKRKILNVSKSAKADQVSVKEDNSDDDDHVPIAKRMKPDSSTNKSSAVKPNVKKQLT 396

Query: 1872 XXXXXXXXXXXXXXXXXXXXXXSTKMLPGSGDGQKKWTTLVHNGVIFPPPYTPHGVKMLY 1693
                                   +K LP SGDGQKKWTTL HNGVIFPPPY PHGVKMLY
Sbjct: 397  SSKMITRKPNSPAKDSKYSKS--SKSLP-SGDGQKKWTTLEHNGVIFPPPYKPHGVKMLY 453

Query: 1692 KRKEVNLTPEQEEVATMFAVMLETDYMQKPKFRENFWNDWRRLLGKNHVIQNLEDCDFNP 1513
            + K V+LTPEQEEVATM AVM +TDY  KP FRENFWNDW+++LGKNHVIQ L+DCDF P
Sbjct: 454  QGKPVDLTPEQEEVATMIAVMRDTDYYNKPTFRENFWNDWQKILGKNHVIQKLDDCDFTP 513

Query: 1512 IYDWHXXXXXXXXXXXXXXXXXXXXXXXXXXXKYMWATVDNVKEKVGNFRVEPPGLFRGR 1333
            IY+WH                           KYMWA VD VKEKVGNFRVEPPGLFRGR
Sbjct: 514  IYEWHMREKEKKKQMSAEEKKALKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGR 573

Query: 1332 GEHPKMGKLKKRIRPSDITINIGKDAPIPECPIPGESWKEVKHDNTVTWLAFWNDAINPK 1153
            GEHPKMGKLK RI P DITINIGK+AP+PECPIPGESWKEVKHDNTVTWLAFWND INPK
Sbjct: 574  GEHPKMGKLKNRIHPCDITINIGKEAPVPECPIPGESWKEVKHDNTVTWLAFWNDPINPK 633

Query: 1152 EFKYVFLAASSSLKGQSDKEKYEKARKLKDYIHSIRAAYTKDFVSKDVTRRQIAVATYLI 973
            EFKYVFLAASSSLKGQSDKEKYEKARKLKD+I SIRAAYTK+F+SKDVT+RQIAVATYLI
Sbjct: 634  EFKYVFLAASSSLKGQSDKEKYEKARKLKDHIGSIRAAYTKNFMSKDVTKRQIAVATYLI 693

Query: 972  DKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVELPVY 793
            DKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVE PVY
Sbjct: 694  DKLALRAGNEKDDDEADTVGCCTLKVGNVECIPPNKLKFDFLGKDSIQYVNTVEVEPPVY 753

Query: 792  KAIGQFQTGKKQNDDLFDKLDTAKLNAHLKELMPGLTAKVFRTYNASITLDDMLNRGTRD 613
            KAIGQFQ GK + DDLFD+LDT+KLNAHLKELMPGLTAKVFRTYNASITLD ML++ TRD
Sbjct: 754  KAIGQFQAGKSKTDDLFDELDTSKLNAHLKELMPGLTAKVFRTYNASITLDVMLSKETRD 813

Query: 612  GEVAEKIEVYQRANKEVAIICNHQRTVSKSHTAQMSRLTEKIEEXXXXXXXXXXXXDRAK 433
            GEV EK+ VYQ+ANK+VAIICNHQR+VSKSH AQ+ RL  KIEE            DRA+
Sbjct: 814  GEVGEKVVVYQQANKQVAIICNHQRSVSKSHGAQIERLAGKIEELRELLEELNSDLDRAR 873

Query: 432  KGKPPLKDSDGKGKRNLTPEALERKIAQTNAKIEKMERDMQTKEDLKTVALGTSKINYLD 253
            KGKPPL  SDGK +RNLTPEALE+KIAQTNAKIEKMERDMQTKED+KTVALGTSKINYLD
Sbjct: 874  KGKPPLMGSDGKRRRNLTPEALEKKIAQTNAKIEKMERDMQTKEDMKTVALGTSKINYLD 933

Query: 252  PRITVAWCKRHEVPIEKIFNKSLLAKFAWSMDVDPEFRF 136
            PRI+VAWCKRH+VPIEKIFNKSLLAKFAW+MDVDPEFRF
Sbjct: 934  PRISVAWCKRHDVPIEKIFNKSLLAKFAWAMDVDPEFRF 972