BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006373
         (1416 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   473   e-130
gb|KDO66626.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   473   e-130
ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citr...   471   e-130
gb|KDO66628.1| hypothetical protein CISIN_1g015442mg [Citrus sin...   466   e-128
ref|XP_007016334.1| Transcription initiation factor IIA subunit ...   415   e-113
ref|XP_012475136.1| PREDICTED: transcription initiation factor I...   392   e-106
ref|XP_012446718.1| PREDICTED: transcription initiation factor I...   392   e-106
ref|XP_012066966.1| PREDICTED: transcription initiation factor I...   391   e-106
gb|KJB55820.1| hypothetical protein B456_009G096500 [Gossypium r...   383   e-103
ref|XP_002520518.1| protein with unknown function [Ricinus commu...   379   e-102
ref|XP_011032247.1| PREDICTED: transcription initiation factor I...   378   e-102
ref|XP_002282322.1| PREDICTED: transcription initiation factor I...   372   e-100
emb|CDP09102.1| unnamed protein product [Coffea canephora]            355   7e-95
ref|XP_011035265.1| PREDICTED: transcription initiation factor I...   352   3e-94
ref|XP_010685693.1| PREDICTED: transcription initiation factor I...   352   5e-94
ref|XP_010033104.1| PREDICTED: transcription initiation factor I...   350   2e-93
ref|XP_002298340.1| transcription factor IIA large subunit famil...   350   2e-93
ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Popu...   349   3e-93
ref|XP_004486980.1| PREDICTED: transcription initiation factor I...   345   4e-92
ref|XP_003543527.1| PREDICTED: transcription initiation factor I...   343   3e-91

>gb|KDO66627.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 406

 Score =  473 bits (1218), Expect = e-130
 Identities = 256/369 (69%), Positives = 266/369 (72%), Gaps = 14/369 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWEMKMIQAGV+   IDR+SAP QPAPGG ITPVHDLNV             E       
Sbjct: 41   IWEMKMIQAGVI---IDRTSAPKQPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTP 97

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGS------ADNSIYNIPTGSSDYPTPVNDSGGNTEAKG 1075
                     PGSTPL G+TPLPGS      ADNS YNIPTGSSDYPTP +DSGGNTEAK 
Sbjct: 98   LQTPIQTPLPGSTPLPGSTPLPGSTPLPGTADNSTYNIPTGSSDYPTPASDSGGNTEAKS 157

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 895
            GNGR          PWMN RPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK
Sbjct: 158  GNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 217

Query: 894  REDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQ-------GTIANGQILAHLASSS-K 739
            REDFPAQY NGGYNIPQ+DGAGDA SE+FELEV +        T AN +I A+LASSS K
Sbjct: 218  REDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVK 277

Query: 738  IPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXX 559
            IPQLDGP+PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND QASTPA           
Sbjct: 278  IPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDD 337

Query: 558  XXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 379
                                 LNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF
Sbjct: 338  DDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 397

Query: 378  NKATGEFDF 352
            NKATGEFDF
Sbjct: 398  NKATGEFDF 406


>gb|KDO66626.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 386

 Score =  473 bits (1218), Expect = e-130
 Identities = 256/369 (69%), Positives = 266/369 (72%), Gaps = 14/369 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWEMKMIQAGV+   IDR+SAP QPAPGG ITPVHDLNV             E       
Sbjct: 21   IWEMKMIQAGVI---IDRTSAPKQPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTP 77

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGS------ADNSIYNIPTGSSDYPTPVNDSGGNTEAKG 1075
                     PGSTPL G+TPLPGS      ADNS YNIPTGSSDYPTP +DSGGNTEAK 
Sbjct: 78   LQTPIQTPLPGSTPLPGSTPLPGSTPLPGTADNSTYNIPTGSSDYPTPASDSGGNTEAKS 137

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 895
            GNGR          PWMN RPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK
Sbjct: 138  GNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 197

Query: 894  REDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQ-------GTIANGQILAHLASSS-K 739
            REDFPAQY NGGYNIPQ+DGAGDA SE+FELEV +        T AN +I A+LASSS K
Sbjct: 198  REDFPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVK 257

Query: 738  IPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXX 559
            IPQLDGP+PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND QASTPA           
Sbjct: 258  IPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDD 317

Query: 558  XXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 379
                                 LNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF
Sbjct: 318  DDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 377

Query: 378  NKATGEFDF 352
            NKATGEFDF
Sbjct: 378  NKATGEFDF 386


>ref|XP_006424899.1| hypothetical protein CICLE_v10028561mg [Citrus clementina]
            gi|568870376|ref|XP_006488381.1| PREDICTED: transcription
            initiation factor IIA subunit 1-like [Citrus sinensis]
            gi|557526833|gb|ESR38139.1| hypothetical protein
            CICLE_v10028561mg [Citrus clementina]
          Length = 406

 Score =  471 bits (1213), Expect = e-130
 Identities = 255/369 (69%), Positives = 265/369 (71%), Gaps = 14/369 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWEMKMIQAGV+   IDR+SAP QPAPGG ITPVHDLNV             E       
Sbjct: 41   IWEMKMIQAGVI---IDRTSAPKQPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTP 97

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGS------ADNSIYNIPTGSSDYPTPVNDSGGNTEAKG 1075
                     PGSTPL G+TPLPGS      ADNS YNIPTGSSDYPTP +DSGGNTEAK 
Sbjct: 98   LQTPIQTPLPGSTPLPGSTPLPGSTPLPGTADNSTYNIPTGSSDYPTPASDSGGNTEAKS 157

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 895
            GNGR          PWMN RPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK
Sbjct: 158  GNGRPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 217

Query: 894  REDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQ-------GTIANGQILAHLASSS-K 739
            REDFPAQY NGGYNIPQ+DGAGDA  E+FELEV +        T AN +I A+LASSS K
Sbjct: 218  REDFPAQYHNGGYNIPQQDGAGDAMPEIFELEVSEFPGRQDSVTTANREIFANLASSSVK 277

Query: 738  IPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXX 559
            IPQLDGP+PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND QASTPA           
Sbjct: 278  IPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDD 337

Query: 558  XXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 379
                                 LNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF
Sbjct: 338  DDEPLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 397

Query: 378  NKATGEFDF 352
            NKATGEFDF
Sbjct: 398  NKATGEFDF 406


>gb|KDO66628.1| hypothetical protein CISIN_1g015442mg [Citrus sinensis]
          Length = 363

 Score =  466 bits (1198), Expect = e-128
 Identities = 253/366 (69%), Positives = 263/366 (71%), Gaps = 14/366 (3%)
 Frame = -1

Query: 1407 MKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXXXXX 1228
            MKMIQAGV+   IDR+SAP QPAPGG ITPVHDLNV             E          
Sbjct: 1    MKMIQAGVI---IDRTSAPKQPAPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTPLQT 57

Query: 1227 XXXXXXPGSTPLLGNTPLPGS------ADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNG 1066
                  PGSTPL G+TPLPGS      ADNS YNIPTGSSDYPTP +DSGGNTEAK GNG
Sbjct: 58   PIQTPLPGSTPLPGSTPLPGSTPLPGTADNSTYNIPTGSSDYPTPASDSGGNTEAKSGNG 117

Query: 1065 RXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKRED 886
            R          PWMN RPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKRED
Sbjct: 118  RPSSYMPPPPSPWMNPRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKRED 177

Query: 885  FPAQYRNGGYNIPQRDGAGDASSELFELEVCQ-------GTIANGQILAHLASSS-KIPQ 730
            FPAQY NGGYNIPQ+DGAGDA SE+FELEV +        T AN +I A+LASSS KIPQ
Sbjct: 178  FPAQYHNGGYNIPQQDGAGDAMSEIFELEVSEFPGRQDSVTTANREIFANLASSSVKIPQ 237

Query: 729  LDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXXXXX 550
            LDGP+PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND QASTPA              
Sbjct: 238  LDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQASTPAVVTQNDAAEDDDDE 297

Query: 549  XXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKA 370
                              LNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKA
Sbjct: 298  PLNENDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKA 357

Query: 369  TGEFDF 352
            TGEFDF
Sbjct: 358  TGEFDF 363


>ref|XP_007016334.1| Transcription initiation factor IIA subunit 1 [Theobroma cacao]
            gi|508786697|gb|EOY33953.1| Transcription initiation
            factor IIA subunit 1 [Theobroma cacao]
          Length = 393

 Score =  415 bits (1067), Expect = e-113
 Identities = 228/367 (62%), Positives = 245/367 (66%), Gaps = 12/367 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWEMKM+QAGV+CGPI+RSS   QP PGG ITPVHDLNV             +       
Sbjct: 42   IWEMKMMQAGVVCGPIERSSGQKQPTPGGPITPVHDLNVPYEGPEEYETPTADMLFPPTP 101

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNGRXX 1057
                        TP+   TPLPGSAD S+YNIPTGSSDYPTPV D GGNT+AKG      
Sbjct: 102  L----------QTPV--PTPLPGSADGSMYNIPTGSSDYPTPVTDGGGNTDAKGAR---P 146

Query: 1056 XXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPA 877
                    PW NQR PLSVDVNVAYVEGRDE DRG SHQPLTQDFF MS+GKRKREDF  
Sbjct: 147  SPYMQSPSPWPNQRTPLSVDVNVAYVEGRDEVDRGPSHQPLTQDFFMMSSGKRKREDFTT 206

Query: 876  QYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLA-SSSKIPQ 730
            QY NGG  IPQ+DGAGDA  E+ + E  +G          T A  +ILAHLA SSSKIPQ
Sbjct: 207  QYHNGGGYIPQQDGAGDAIYEVAKAEGSKGSDFLDRRDSTTTAKSEILAHLARSSSKIPQ 266

Query: 729  LDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA-XXXXXXXXXXXXX 553
            LDGP+PDPYDD+LSTPNIYNYQGVVNEDYN+VNTPAPND QA+TPA              
Sbjct: 267  LDGPIPDPYDDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQAATPAPVAQNDTGDDDDDE 326

Query: 552  XXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNK 373
                               LNTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNK
Sbjct: 327  PLNEDDDDDELDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 386

Query: 372  ATGEFDF 352
            ATGEFDF
Sbjct: 387  ATGEFDF 393


>ref|XP_012475136.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Gossypium raimondii] gi|763741415|gb|KJB08914.1|
            hypothetical protein B456_001G112500 [Gossypium
            raimondii]
          Length = 391

 Score =  392 bits (1008), Expect = e-106
 Identities = 222/368 (60%), Positives = 244/368 (66%), Gaps = 13/368 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWE KM+QAGV+ GPI+RSS   QP PG AITPVHDLNV             +       
Sbjct: 42   IWEAKMMQAGVILGPIERSSQK-QPTPGSAITPVHDLNVPYEGTEEYETPTADMLFPPTP 100

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNGRXX 1057
                        TP+   TPLPGSAD S+YNIPTG SDYPTPVND+G N + KGG     
Sbjct: 101  L----------QTPV--PTPLPGSADGSMYNIPTGGSDYPTPVNDNGSNADIKGGR---P 145

Query: 1056 XXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPA 877
                    PW NQR PLSVDVNVAYVEGR+E DRGTS+QPLTQDFF MS+GKRKREDF A
Sbjct: 146  SPYMQSPSPWSNQRTPLSVDVNVAYVEGREEVDRGTSNQPLTQDFFMMSSGKRKREDF-A 204

Query: 876  QYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLA-SSSKIPQ 730
            QY+NGGY IPQ+DGAGDA+SE+ + E  +G          T A  + LA LA SSSKIPQ
Sbjct: 205  QYQNGGY-IPQQDGAGDATSEVAKAEGSRGGNFLDRRHSTTTAKSKFLAELARSSSKIPQ 263

Query: 729  LDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXXXXX 550
            LDGP+PD Y+D+LSTPNIYNYQGVVNEDYN+VNTPAPND QASTPA              
Sbjct: 264  LDGPIPDSYEDMLSTPNIYNYQGVVNEDYNVVNTPAPNDLQASTPAPAPQNDIVDDDDDE 323

Query: 549  XXXXXXXXXXXXXXXXXXL--NTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFN 376
                                 NTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFN
Sbjct: 324  PLNEDDDDEDDLDDVDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFN 383

Query: 375  KATGEFDF 352
            KATGEFDF
Sbjct: 384  KATGEFDF 391


>ref|XP_012446718.1| PREDICTED: transcription initiation factor IIA large subunit
            [Gossypium raimondii] gi|763788823|gb|KJB55819.1|
            hypothetical protein B456_009G096500 [Gossypium
            raimondii]
          Length = 391

 Score =  392 bits (1006), Expect = e-106
 Identities = 213/366 (58%), Positives = 236/366 (64%), Gaps = 11/366 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE KM+QAG +CGPI+RS+   QP  GG ITPVHDLNV             +       
Sbjct: 42   LWETKMMQAGAICGPIERSTGQKQPTAGGPITPVHDLNVPYEGTEEYETPTADMLFPPTP 101

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNGRXX 1057
                        TP+   TPLPGSAD S+YNIPTGSSDYPTPVND   N + KGG     
Sbjct: 102  L----------QTPV--PTPLPGSADGSMYNIPTGSSDYPTPVNDGASNADVKGGR---P 146

Query: 1056 XXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPA 877
                    PW NQR PLSVDVNVAYVEGRDE DRGTS+QPLTQDFF M  GKRKREDF  
Sbjct: 147  SPYMQSPSPWSNQRTPLSVDVNVAYVEGRDEVDRGTSNQPLTQDFFMMPPGKRKREDFAT 206

Query: 876  QYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLASSS-KIPQ 730
            QY NGGY IPQ+DGAGD++SE+ + E  +G          T     ILAH A+SS KI Q
Sbjct: 207  QYNNGGY-IPQQDGAGDSTSEVAKTEGSKGCNFLGRHDSATTGKTNILAHFATSSLKISQ 265

Query: 729  LDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXXXXX 550
            LDGP+PDP++D+LSTPNIYNYQGVV EDYN+ NTPAPND QA+TPA              
Sbjct: 266  LDGPIPDPFEDMLSTPNIYNYQGVVGEDYNVANTPAPNDLQAATPAPVAQNDTGDDDDDE 325

Query: 549  XXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKA 370
                              LNTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKA
Sbjct: 326  PLNEDDDDDDLDDVDQEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKA 385

Query: 369  TGEFDF 352
            TGEFDF
Sbjct: 386  TGEFDF 391


>ref|XP_012066966.1| PREDICTED: transcription initiation factor IIA large subunit
            [Jatropha curcas] gi|643735683|gb|KDP42211.1|
            hypothetical protein JCGZ_02941 [Jatropha curcas]
          Length = 407

 Score =  391 bits (1004), Expect = e-106
 Identities = 226/372 (60%), Positives = 248/372 (66%), Gaps = 17/372 (4%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWEMKM+QAGV+ GPI+RSSA  +P PGG ITPVHDLNV             E       
Sbjct: 43   IWEMKMMQAGVILGPIERSSAA-KPVPGGPITPVHDLNVPYEGPEEYETPTAEILFPPTP 101

Query: 1236 XXXXXXXXXPGS--TPLLGN--TPLPGSADNS-IYNIPTG-SSDYPTPVNDSGGNTEAKG 1075
                     PGS  TPL GN  TPLPGSADNS +YNIPTG +S+YPTPV+D+GG+TEAK 
Sbjct: 102  LQTPIQTPLPGSVQTPLPGNGQTPLPGSADNSSMYNIPTGPTSEYPTPVSDTGGSTEAKP 161

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 895
            G             PWMNQRPPL  DVNVAYVEGR+EADRG SHQPLTQDFF MS+GKRK
Sbjct: 162  GR---PSPYMQAPSPWMNQRPPL--DVNVAYVEGREEADRGNSHQPLTQDFFMMSSGKRK 216

Query: 894  REDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQGTI--------ANGQILAHLASSS- 742
            REDF  Q+ NGG+ IPQ+DGAGD  SE  +     G++        AN +IL+H      
Sbjct: 217  REDFATQFNNGGF-IPQQDGAGDVPSEALQASQGNGSLGRCDTITSANIEILSHATRRVL 275

Query: 741  KIPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTP--AXXXXXXXX 568
            KIPQLDGP+PDPYDDVLSTPNIYNYQGVVNEDYNI NTPAPND QASTP  A        
Sbjct: 276  KIPQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIANTPAPNDIQASTPAVAPQNDAVDD 335

Query: 567  XXXXXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKD 388
                                    +NTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKD
Sbjct: 336  DDDEPLNEDDDDDDDLDDVEQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKD 395

Query: 387  ILFNKATGEFDF 352
            ILFNKATGEFDF
Sbjct: 396  ILFNKATGEFDF 407


>gb|KJB55820.1| hypothetical protein B456_009G096500 [Gossypium raimondii]
          Length = 345

 Score =  383 bits (984), Expect = e-103
 Identities = 210/361 (58%), Positives = 232/361 (64%), Gaps = 11/361 (3%)
 Frame = -1

Query: 1401 MIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXXXXXXX 1222
            M+QAG +CGPI+RS+   QP  GG ITPVHDLNV             +            
Sbjct: 1    MMQAGAICGPIERSTGQKQPTAGGPITPVHDLNVPYEGTEEYETPTADMLFPPTPL---- 56

Query: 1221 XXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNGRXXXXXXX 1042
                   TP+   TPLPGSAD S+YNIPTGSSDYPTPVND   N + KGG          
Sbjct: 57   ------QTPV--PTPLPGSADGSMYNIPTGSSDYPTPVNDGASNADVKGGR---PSPYMQ 105

Query: 1041 XXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPAQYRNG 862
               PW NQR PLSVDVNVAYVEGRDE DRGTS+QPLTQDFF M  GKRKREDF  QY NG
Sbjct: 106  SPSPWSNQRTPLSVDVNVAYVEGRDEVDRGTSNQPLTQDFFMMPPGKRKREDFATQYNNG 165

Query: 861  GYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLASSS-KIPQLDGPV 715
            GY IPQ+DGAGD++SE+ + E  +G          T     ILAH A+SS KI QLDGP+
Sbjct: 166  GY-IPQQDGAGDSTSEVAKTEGSKGCNFLGRHDSATTGKTNILAHFATSSLKISQLDGPI 224

Query: 714  PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAXXXXXXXXXXXXXXXXXXX 535
            PDP++D+LSTPNIYNYQGVV EDYN+ NTPAPND QA+TPA                   
Sbjct: 225  PDPFEDMLSTPNIYNYQGVVGEDYNVANTPAPNDLQAATPAPVAQNDTGDDDDDEPLNED 284

Query: 534  XXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEFD 355
                         LNTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKATGEFD
Sbjct: 285  DDDDDLDDVDQEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEFD 344

Query: 354  F 352
            F
Sbjct: 345  F 345


>ref|XP_002520518.1| protein with unknown function [Ricinus communis]
            gi|223540360|gb|EEF41931.1| protein with unknown function
            [Ricinus communis]
          Length = 383

 Score =  379 bits (972), Expect = e-102
 Identities = 215/362 (59%), Positives = 242/362 (66%), Gaps = 7/362 (1%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWE+KM+QAGV+CGPI+RSS   +  PGG ITPVHDLNV             E       
Sbjct: 43   IWELKMMQAGVICGPIERSSGA-KTVPGGVITPVHDLNVPYEGTEEYETPTAEILFPP-- 99

Query: 1236 XXXXXXXXXPGSTPLLGN--TPLPGSADNS-IYNIPTG-SSDYPTPVNDSGGNTEAKGGN 1069
                        TPL G   TPLPGS DNS +YNIPTG +S+YPTPV+DSGG+TEAK G 
Sbjct: 100  ------------TPLPGTAQTPLPGSVDNSSMYNIPTGPTSEYPTPVSDSGGSTEAKAGR 147

Query: 1068 GRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKRE 889
                        PW+NQRPPL  DVN+AYVEGR+EADRGTS+QPLTQDFFT ++GKRKRE
Sbjct: 148  ---PSPYMQPPSPWINQRPPL--DVNIAYVEGREEADRGTSNQPLTQDFFTGASGKRKRE 202

Query: 888  DFPAQYRNGGYNIPQRDGAGDASSELFELEVCQGTIANGQILAHLASSS-KIPQLDGPVP 712
            DF AQY NGG+ IPQ+DGAGD   E+ ++E      A+ +IL+ +     KIPQLDGP+P
Sbjct: 203  DFAAQYNNGGF-IPQQDGAGDTPFEVLQVERDTVISADIEILSSVTRRGLKIPQLDGPIP 261

Query: 711  DPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA--XXXXXXXXXXXXXXXXXX 538
            DPYDDVLSTPNIYNYQGV NEDYNI NTPAPND QASTPA                    
Sbjct: 262  DPYDDVLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAIIPQNDVVDDDDDEPLNEDD 321

Query: 537  XXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKATGEF 358
                          +NTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKATGEF
Sbjct: 322  DDDDDLDDVDQGEDMNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKATGEF 381

Query: 357  DF 352
            DF
Sbjct: 382  DF 383


>ref|XP_011032247.1| PREDICTED: transcription initiation factor IIA subunit 1-like isoform
            X1 [Populus euphratica]
          Length = 408

 Score =  378 bits (971), Expect = e-102
 Identities = 218/374 (58%), Positives = 242/374 (64%), Gaps = 19/374 (5%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE KM+QAG +CG  +RSSA   P PGG ITPVHDLNV             E       
Sbjct: 43   LWEAKMMQAGAICGTAERSSANKLPVPGGPITPVHDLNVPYEGTEEYETPTAEMLFPPTP 102

Query: 1236 XXXXXXXXXPGS--TPLLGN--TPLPGSADNS-IYNIPTGSSDYPTPVNDSGGNTEAKGG 1072
                     PGS  TPL GN  TPLPGS DNS +YNIPTGSSDYPTP +D+GG+T+ K G
Sbjct: 103  MQTPMQTPLPGSAQTPLPGNAQTPLPGSVDNSSMYNIPTGSSDYPTPGSDTGGSTDGKAG 162

Query: 1071 NGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKR 892
                          WM+QRPPLSVDVNVAYVEGRDE DRGTSHQ LTQDFF M +GKRKR
Sbjct: 163  R----PSPFMQPPTWMHQRPPLSVDVNVAYVEGRDEVDRGTSHQTLTQDFF-MPSGKRKR 217

Query: 891  EDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLASSS 742
            EDF  +Y NGG+ IPQ+DGAGD++SE+ +  V QG          T  N  ILA ++ S 
Sbjct: 218  EDFAPKYNNGGF-IPQQDGAGDSASEVSQ--VSQGNDPLGRCDTSTTKNKVILARVSRSY 274

Query: 741  -KIPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA---XXXXXX 574
             KIPQ+DGP+PDPYDDV+STPNIYNYQGV NEDYNI NTPAPND  ASTPA         
Sbjct: 275  LKIPQVDGPIPDPYDDVVSTPNIYNYQGVANEDYNIANTPAPNDLLASTPAVVSQNDVAD 334

Query: 573  XXXXXXXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINN 394
                                      LNTQHLVLAQFDKVTRTKSRWKC LKDGIMHINN
Sbjct: 335  DDDDDEPLNEDDDDDEDLDEVDQGEELNTQHLVLAQFDKVTRTKSRWKCILKDGIMHINN 394

Query: 393  KDILFNKATGEFDF 352
            KDILFNKATGEF+F
Sbjct: 395  KDILFNKATGEFEF 408


>ref|XP_002282322.1| PREDICTED: transcription initiation factor IIA subunit 1 [Vitis
            vinifera] gi|297746029|emb|CBI16085.3| unnamed protein
            product [Vitis vinifera]
          Length = 393

 Score =  372 bits (954), Expect = e-100
 Identities = 212/368 (57%), Positives = 234/368 (63%), Gaps = 13/368 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITP-VHDLNVXXXXXXXXXXXXXEXXXXXX 1240
            IWEMKM+QAGV+ GPI+RS+AP Q +   A TP VHDLNV             E      
Sbjct: 43   IWEMKMVQAGVVTGPIERSTAPKQTSGAPAPTPPVHDLNVPYEGTEEYETPTAEILFPPT 102

Query: 1239 XXXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNGRX 1060
                         TP+   TPLPG  DNS+YNIPTG ++YP    D GG T+ K G    
Sbjct: 103  PL----------QTPI--QTPLPGMGDNSMYNIPTGPTEYPA-AQDGGGATDMKSGR--- 146

Query: 1059 XXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFP 880
                     PWM QRPPLSVDVNVAYVEGRDE DRG S QPLTQDFF MS+GKRKREDFP
Sbjct: 147  PPSYMPPPSPWMQQRPPLSVDVNVAYVEGRDEGDRGNSQQPLTQDFFMMSSGKRKREDFP 206

Query: 879  AQYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLASS-SKIP 733
            +QY   GY IPQ+DGAGD + E+FE+EV QG          T AN +I   +A S  +IP
Sbjct: 207  SQYHTSGY-IPQQDGAGDPAPEVFEVEVSQGSNSIKGHDILTKANREIFPQVAGSYVRIP 265

Query: 732  QLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA-XXXXXXXXXXXX 556
            QLDGP+PDPY+DVLSTPNIYNYQGVVNEDYNIVNTPAPND QA TPA             
Sbjct: 266  QLDGPIPDPYEDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAGTPAVGIQNDVGDDDDD 325

Query: 555  XXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFN 376
                                LNTQHLVLAQFDKVTRTKS+WKC LKDGIMHINNKDILFN
Sbjct: 326  EPPLNENDDDDLDDVEQGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILFN 385

Query: 375  KATGEFDF 352
            KA GEFDF
Sbjct: 386  KANGEFDF 393


>emb|CDP09102.1| unnamed protein product [Coffea canephora]
          Length = 411

 Score =  355 bits (910), Expect = 7e-95
 Identities = 211/379 (55%), Positives = 239/379 (63%), Gaps = 24/379 (6%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WEMKM+QAG + GPI+RSSAP +  PG  +TPVHDLNV             +       
Sbjct: 42   LWEMKMMQAGAILGPIERSSAP-KATPG--VTPVHDLNVPYEGTEEYETPTADMLFPPTP 98

Query: 1236 XXXXXXXXXPG--STPLLGN----------TPLPGSADNSIYNIPTGSSDYP----TPVN 1105
                     PG   TPL GN          TPLPG+AD+S+YNIPTG +       + VN
Sbjct: 99   LQTPMPTPLPGMAQTPLPGNAQTPLPGTAQTPLPGTADSSLYNIPTGGTPITPNEYSSVN 158

Query: 1104 DSGGNTEAKGGNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQD 925
            DSGG  E K G GR          PW+NQRPPL  DVNVAYVEGR+E +RG SHQP+TQD
Sbjct: 159  DSGGAPEVKPGPGR-PSPYMQPPSPWLNQRPPL--DVNVAYVEGREEGERGASHQPMTQD 215

Query: 924  FFTMSAGKRKREDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQG-------TIANGQI 766
            FF MSAGKRKR++F +QY NGGY IPQ+DGAGD  S   EL+V QG       TIA  ++
Sbjct: 216  FFMMSAGKRKRDEFASQYPNGGY-IPQQDGAGDTISN--ELKVGQGSNTQHNTTIAGAEM 272

Query: 765  -LAHLASSSKIPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPAX 589
             L    + S+I QLDGP+PDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPND QA+TPA 
Sbjct: 273  SLQGGRAVSRISQLDGPIPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDIQAATPAA 332

Query: 588  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGI 409
                                           LNT HLVLAQFDKVTRTKSRWKC LKDGI
Sbjct: 333  VTQNDTVDDDEDEPLNEDDDDELDDVDQGEDLNTTHLVLAQFDKVTRTKSRWKCTLKDGI 392

Query: 408  MHINNKDILFNKATGEFDF 352
            M INNKDILFNKATGEF+F
Sbjct: 393  MRINNKDILFNKATGEFEF 411


>ref|XP_011035265.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Populus euphratica]
          Length = 405

 Score =  352 bits (904), Expect = 3e-94
 Identities = 213/374 (56%), Positives = 240/374 (64%), Gaps = 19/374 (5%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE K+ QAGVL G I RSSA  QP PGG +TPVHDLNV             E       
Sbjct: 42   LWEKKLKQAGVLSGSIVRSSANKQPVPGG-LTPVHDLNVPYEGTEEYETPTAEILFPPTP 100

Query: 1236 XXXXXXXXXPGS--TPLLGN--TPLPGSADNS-IYNIPTGSS-DYPTPVNDSGGNTEAKG 1075
                     PGS  TPL GN  TPLPGS DNS +YNIPTGSS DYPTPV+D+GG+T+ K 
Sbjct: 101  LQTPMQTPLPGSAQTPLPGNVQTPLPGSVDNSSMYNIPTGSSSDYPTPVSDAGGSTDGKA 160

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 895
            G               M+QRPPL  DVNVAYVEGRDE DRG SHQ LTQDFF MS+GKRK
Sbjct: 161  GRPSHFMQSPSTL---MHQRPPL--DVNVAYVEGRDEVDRGASHQTLTQDFF-MSSGKRK 214

Query: 894  REDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLASS 745
            R DF  ++ NGG+ IPQ+DGA D++SE+ +  V QG          T  N +ILA ++SS
Sbjct: 215  RGDFVPKFNNGGF-IPQQDGAVDSASEVSQ--VSQGNNPHGRCDTITTKNREILARVSSS 271

Query: 744  S-KIPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA--XXXXXX 574
              KIPQ+DGP+PDPYDD+LSTPNIYNYQGV NEDYN  NTPAPND QASTPA        
Sbjct: 272  YLKIPQVDGPIPDPYDDMLSTPNIYNYQGVANEDYNNANTPAPNDLQASTPAVVSQNDDV 331

Query: 573  XXXXXXXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINN 394
                                      LNTQHL+LAQFDKVTRTKSRWKC LKDG+MHINN
Sbjct: 332  DDDDDEPLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINN 391

Query: 393  KDILFNKATGEFDF 352
            +DILFNKATGEFDF
Sbjct: 392  RDILFNKATGEFDF 405


>ref|XP_010685693.1| PREDICTED: transcription initiation factor IIA large subunit [Beta
            vulgaris subsp. vulgaris] gi|870853304|gb|KMT05185.1|
            hypothetical protein BVRB_7g173320 [Beta vulgaris subsp.
            vulgaris]
          Length = 389

 Score =  352 bits (903), Expect = 5e-94
 Identities = 199/365 (54%), Positives = 230/365 (63%), Gaps = 10/365 (2%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE+KM+QAG +  P +R + P +P PG AITPVHDLNV             E       
Sbjct: 42   LWELKMMQAGAVLQPSERPTVP-KPVPGAAITPVHDLNVPYEGTEEYETPTAEMLFPPTP 100

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNT--EAKGGNGR 1063
                        TP+   TPLPG+AD+S+YNIPTG SDYPTP ++ G     + K G GR
Sbjct: 101  L----------QTPI--QTPLPGTADSSMYNIPTGPSDYPTPTSNEGVGVPNDIKPGVGR 148

Query: 1062 XXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDF 883
                       WMNQRPPL VDVNVAYVEGR+E DRG+S QP TQDFFT   GKRKR++F
Sbjct: 149  PSPYMQPPSP-WMNQRPPLGVDVNVAYVEGREEVDRGSS-QPATQDFFTGPTGKRKRDEF 206

Query: 882  PAQYRNGGYNIPQRDGAGDASSELFELEVCQGT------IANGQILAHLASSSKIPQLDG 721
            P QY+ GGY IPQ+DGAGDA+ ++FELE+ Q        +          SSS+IPQLDG
Sbjct: 207  PPQYQGGGY-IPQQDGAGDAAGDVFELEIIQSKSLGRSGVVKVTSALQKGSSSRIPQLDG 265

Query: 720  PVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA--XXXXXXXXXXXXXXX 547
            P+PDPY+D+LSTPNIYNYQ  VNEDYN+VNTPAPND QA TPA                 
Sbjct: 266  PIPDPYEDMLSTPNIYNYQ-PVNEDYNVVNTPAPNDLQAGTPAPPIQNDLGDENGDDEPP 324

Query: 546  XXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNKAT 367
                             LNTQHLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNKA+
Sbjct: 325  LNENDDDDLDDIDQGEELNTQHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNKAS 384

Query: 366  GEFDF 352
            GEFDF
Sbjct: 385  GEFDF 389


>ref|XP_010033104.1| PREDICTED: transcription initiation factor IIA large subunit-like
            [Eucalyptus grandis] gi|629086291|gb|KCW52648.1|
            hypothetical protein EUGRSUZ_J02029 [Eucalyptus grandis]
          Length = 393

 Score =  350 bits (898), Expect = 2e-93
 Identities = 202/369 (54%), Positives = 230/369 (62%), Gaps = 14/369 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE KM+QAG + GP+DRS+    PA GGA  PVHDLNV             +       
Sbjct: 43   MWETKMMQAGAVLGPVDRSATAKAPA-GGAAAPVHDLNVPYEGTEEFETPTADMLFPPTP 101

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVND----SGGNTEAKGGN 1069
                        TP+   TPLPG+ D+++YNIPTGSSDYPTP ND    S GNTE K G 
Sbjct: 102  L----------QTPI--PTPLPGTVDSNLYNIPTGSSDYPTPSNDGVGNSSGNTEIKAGR 149

Query: 1068 GRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKRE 889
                        PWMNQRPPL VDVNVAY+E R++ DRGTSHQP TQDFFT S GKRKR+
Sbjct: 150  ---PSPYMPPPSPWMNQRPPLGVDVNVAYMEAREDGDRGTSHQPHTQDFFTAS-GKRKRD 205

Query: 888  DFPAQYRNGGYNIPQRDGAGDASSELFELEVCQGTIA-----NGQILAHLASS-SKIPQL 727
            DF   Y+NGGY IPQ+DGAGDA  E  ++     T+      N Q+LAH+    SKIPQ+
Sbjct: 206  DFVQHYQNGGY-IPQQDGAGDAVFEDSQITEKTTTLPAADTRNRQMLAHVGRPLSKIPQV 264

Query: 726  DGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA----XXXXXXXXXXX 559
            DG  PDPYD++LSTPNIYNYQGVV+EDYNI +TPAPND QA TPA               
Sbjct: 265  DGQTPDPYDEMLSTPNIYNYQGVVSEDYNIASTPAPNDLQAGTPAIGVHNDVGEDEDEDE 324

Query: 558  XXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 379
                                 LNTQHLVLAQFDKVTRTKS+WKC LKDGIMHINNKDILF
Sbjct: 325  PPLNENDDDDDDLDDVDNGEELNTQHLVLAQFDKVTRTKSKWKCTLKDGIMHINNKDILF 384

Query: 378  NKATGEFDF 352
            NKATGEFDF
Sbjct: 385  NKATGEFDF 393


>ref|XP_002298340.1| transcription factor IIA large subunit family protein [Populus
            trichocarpa] gi|222845598|gb|EEE83145.1| transcription
            factor IIA large subunit family protein [Populus
            trichocarpa]
          Length = 409

 Score =  350 bits (898), Expect = 2e-93
 Identities = 208/374 (55%), Positives = 239/374 (63%), Gaps = 19/374 (5%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE K++QAGVL GPI RSSA  Q  PGG +TPVHDLNV             E       
Sbjct: 42   LWEKKLMQAGVLSGPIVRSSANKQLVPGG-LTPVHDLNVPYEGTEEYETPTAEILFPPTP 100

Query: 1236 XXXXXXXXXPGS--TPLLGN--TPLPGSADNS-IYNIPTGSS-DYPTPVNDSGGNTEAKG 1075
                     PG+  TPL GN  TPLPGS DNS +YNI TGSS DYPTPV+D+GG+T+ K 
Sbjct: 101  LPGSAQTPLPGNVQTPLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVSDAGGSTDVKA 160

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVN----------VAYVEGRDEADRGTSHQPLTQD 925
            G               M+QRPPL V+V           VAYVEGRDE DRG SHQ LTQD
Sbjct: 161  GRPSHFMQSPSPL---MHQRPPLDVNVGKVLTNKCCAFVAYVEGRDEVDRGGSHQTLTQD 217

Query: 924  FFTMSAGKRKREDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQGTIANGQILAHLASS 745
            FF MS+GKRKR DF  +Y NGG+ IPQ+DGA D++SE+ ++E    T  N +ILA ++ S
Sbjct: 218  FF-MSSGKRKRGDFAPKYNNGGF-IPQQDGAVDSASEVSQVECDTITTKNREILARVSRS 275

Query: 744  S-KIPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA--XXXXXX 574
              KIPQ+DGP+PDPYDD+LSTPNIYNYQGV NEDYNI NTPAPND QASTPA        
Sbjct: 276  YVKIPQVDGPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDV 335

Query: 573  XXXXXXXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINN 394
                                      LNTQHL+LAQFDKVTRTKSRWKC LKDG+MHINN
Sbjct: 336  DDDDDEPLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINN 395

Query: 393  KDILFNKATGEFDF 352
            +DILFNKATGEF+F
Sbjct: 396  RDILFNKATGEFEF 409


>ref|XP_006369542.1| hypothetical protein POPTR_0001s25120g [Populus trichocarpa]
            gi|550348134|gb|ERP66111.1| hypothetical protein
            POPTR_0001s25120g [Populus trichocarpa]
          Length = 405

 Score =  349 bits (896), Expect = 3e-93
 Identities = 211/374 (56%), Positives = 240/374 (64%), Gaps = 19/374 (5%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE K++QAGVL GPI RSSA  Q  PGG +TPVHDLNV             E       
Sbjct: 42   LWEKKLMQAGVLSGPIVRSSANKQLVPGG-LTPVHDLNVPYEGTEEYETPTAEILFPPTP 100

Query: 1236 XXXXXXXXXPGS--TPLLGN--TPLPGSADNS-IYNIPTGSS-DYPTPVNDSGGNTEAKG 1075
                     PG+  TPL GN  TPLPGS DNS +YNI TGSS DYPTPV+D+GG+T+ K 
Sbjct: 101  LPGSAQTPLPGNVQTPLPGNVPTPLPGSVDNSSMYNISTGSSSDYPTPVSDAGGSTDVKA 160

Query: 1074 GNGRXXXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRK 895
            G               M+QRPPL  DVNVAYVEGRDE DRG SHQ LTQDFF MS+GKRK
Sbjct: 161  GRPSHFMQSPSPL---MHQRPPL--DVNVAYVEGRDEVDRGGSHQTLTQDFF-MSSGKRK 214

Query: 894  REDFPAQYRNGGYNIPQRDGAGDASSELFELEVCQG----------TIANGQILAHLASS 745
            R DF  +Y NGG+ IPQ+DGA D++SE+ +  V QG          T  N +ILA ++ S
Sbjct: 215  RGDFAPKYNNGGF-IPQQDGAVDSASEVSQ--VSQGNNPHGRCDTITTKNREILARVSRS 271

Query: 744  S-KIPQLDGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA--XXXXXX 574
              KIPQ+DGP+PDPYDD+LSTPNIYNYQGV NEDYNI NTPAPND QASTPA        
Sbjct: 272  YVKIPQVDGPIPDPYDDMLSTPNIYNYQGVANEDYNIANTPAPNDLQASTPAVVSQNDDV 331

Query: 573  XXXXXXXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINN 394
                                      LNTQHL+LAQFDKVTRTKSRWKC LKDG+MHINN
Sbjct: 332  DDDDDEPLNEDDDDDEDLDGVDQGEELNTQHLILAQFDKVTRTKSRWKCTLKDGVMHINN 391

Query: 393  KDILFNKATGEFDF 352
            +DILFNKATGEF+F
Sbjct: 392  RDILFNKATGEFEF 405


>ref|XP_004486980.1| PREDICTED: transcription initiation factor IIA large subunit [Cicer
            arietinum]
          Length = 389

 Score =  345 bits (886), Expect = 4e-92
 Identities = 202/367 (55%), Positives = 226/367 (61%), Gaps = 12/367 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            IWE KMIQAG + GPI+RSS   +P PGG ITPVHDLNV             E       
Sbjct: 42   IWESKMIQAGAVLGPIERSSGANKPTPGGPITPVHDLNVPYEGTEEYETPTAEILFPPTP 101

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDS-GGNTEAKGGNGRX 1060
                        TP+   TPLPG+ D   YNIPTG SDYP+  ND+ GGN + KGG    
Sbjct: 102  L----------QTPI--QTPLPGTGDTPTYNIPTGPSDYPSSGNDTAGGNADVKGGR--- 146

Query: 1059 XXXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFP 880
                     PW+NQRPPL  DVNVAYVEGR+EADRG S+QP+TQDFFTM  GKRKR D P
Sbjct: 147  PGTYMQPPSPWINQRPPL--DVNVAYVEGREEADRGASNQPMTQDFFTMPGGKRKRNDLP 204

Query: 879  AQYRNGGYNIPQRDGAGDASSELFELEVCQGTIA--------NGQILAHLAS-SSKIPQL 727
             QY  GGY IPQ+DG+GDA+S  FE+EVC G I+         G++ A L   +S+IPQL
Sbjct: 205  PQYDAGGY-IPQQDGSGDAASGNFEIEVCGGGISINSQHTSFKGKMPADLERLASRIPQL 263

Query: 726  DGPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA--XXXXXXXXXXXXX 553
            DGP+P   DDVLSTPNIYNY GV +EDYNI NTPAP +  ASTPA               
Sbjct: 264  DGPIPYE-DDVLSTPNIYNYGGVYSEDYNIANTPAPPEVPASTPALVAQNEVANEDDDDE 322

Query: 552  XXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILFNK 373
                                NT HLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILFNK
Sbjct: 323  PPLNENDDDDMDDLDQGDDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILFNK 382

Query: 372  ATGEFDF 352
            ATGEFDF
Sbjct: 383  ATGEFDF 389


>ref|XP_003543527.1| PREDICTED: transcription initiation factor IIA large subunit-like
            isoformX1 [Glycine max] gi|947074218|gb|KRH23109.1|
            hypothetical protein GLYMA_13G339000 [Glycine max]
          Length = 391

 Score =  343 bits (879), Expect = 3e-91
 Identities = 200/369 (54%), Positives = 227/369 (61%), Gaps = 14/369 (3%)
 Frame = -1

Query: 1416 IWEMKMIQAGVLCGPIDRSSAPMQPAPGGAITPVHDLNVXXXXXXXXXXXXXEXXXXXXX 1237
            +WE KM+QAG + GPI+RS+A  +P PGG ITPVHDLNV             +       
Sbjct: 42   MWESKMMQAGAVLGPIERSTAA-KPTPGGPITPVHDLNVPYEGTDEYETPTADMLFPPTP 100

Query: 1236 XXXXXXXXXPGSTPLLGNTPLPGSADNSIYNIPTGSSDYPTPVNDSGGNTEAKGGNGRXX 1057
                        TP+   TPLPG+ DNS YNIPTG SDYP+  ND+GGN + KG      
Sbjct: 101  L----------QTPI--QTPLPGTGDNSTYNIPTGPSDYPSSGNDTGGNADGKGAR---P 145

Query: 1056 XXXXXXXXPWMNQRPPLSVDVNVAYVEGRDEADRGTSHQPLTQDFFTMSAGKRKREDFPA 877
                    PWMNQRPPL  DVNVAYVEGRDEADRGTS+QP TQDFFTM +GKRKR D  +
Sbjct: 146  APYMQSPSPWMNQRPPL--DVNVAYVEGRDEADRGTSNQPPTQDFFTMPSGKRKRNDLTS 203

Query: 876  QYRNGGYNIPQRDGAGDASSELFELEV--------CQGTIANGQILAHL-ASSSKIPQLD 724
            QY  GGY IPQ+DGAGDA+   FE+EV           TI+ G++ A L  S+S+IPQLD
Sbjct: 204  QYNAGGY-IPQQDGAGDATHGDFEIEVSGRGISINSHHTISKGKMSADLERSTSRIPQLD 262

Query: 723  GPVPDPYDDVLSTPNIYNYQGVVNEDYNIVNTPAPNDFQASTPA-----XXXXXXXXXXX 559
            GP+P   DDVLSTPNIYNY  V +EDYNI NTPAP +  ASTPA                
Sbjct: 263  GPIPYDDDDVLSTPNIYNYGEVFSEDYNISNTPAPPEVPASTPALLVQNEVGNDFDDDDD 322

Query: 558  XXXXXXXXXXXXXXXXXXXXXLNTQHLVLAQFDKVTRTKSRWKCALKDGIMHINNKDILF 379
                                  NT HLVLAQFDKVTRTKSRWKC LKDGIMHINNKDILF
Sbjct: 323  DEPPLNEEDDDDLDDMEQGEDQNTHHLVLAQFDKVTRTKSRWKCTLKDGIMHINNKDILF 382

Query: 378  NKATGEFDF 352
            NKATGEF+F
Sbjct: 383  NKATGEFEF 391