BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00006155
         (1979 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO47597.1| hypothetical protein CISIN_1g0001142mg, partial [...  1251   0.0  
ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1251   0.0  
ref|XP_002518663.1| U520, putative [Ricinus communis] gi|2235420...  1198   0.0  
ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase,...  1192   0.0  
ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase,...  1192   0.0  
ref|XP_011024026.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1191   0.0  
ref|XP_012073544.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1190   0.0  
ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase ...  1187   0.0  
ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1186   0.0  
emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]  1186   0.0  
gb|KJB73065.1| hypothetical protein B456_011G217300 [Gossypium r...  1183   0.0  
ref|XP_012454175.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1183   0.0  
gb|KHG18677.1| U5 small nuclear ribonucleoprotein helicase [Goss...  1182   0.0  
ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1176   0.0  
ref|XP_010061242.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1175   0.0  
ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1172   0.0  
ref|XP_014500879.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1172   0.0  
gb|KOM42591.1| hypothetical protein LR48_Vigan05g019500 [Vigna a...  1172   0.0  
ref|XP_003595992.2| U5 small nuclear ribonucleoprotein 200 kDa h...  1164   0.0  
ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotei...  1162   0.0  

>gb|KDO47597.1| hypothetical protein CISIN_1g0001142mg, partial [Citrus sinensis]
          Length = 2066

 Score = 1251 bits (3238), Expect = 0.0
 Identities = 613/659 (93%), Positives = 634/659 (96%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDF WDDKVHGYVEPFWVIVEDNDGEYILHHEYF+LKKQY+EEDH LNFTVPIYE
Sbjct: 1124 ELTITPDFLWDDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIEEDHSLNFTVPIYE 1183

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNP YEAL
Sbjct: 1184 PLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPLYEAL 1243

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTIC+EFA+LRNHQKASE+GVMRAVY
Sbjct: 1244 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICSEFAILRNHQKASETGVMRAVY 1303

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EALAKER+RDW  KFG+GLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR
Sbjct: 1304 IAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1363

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1364 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAK 1423

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPT TAIVQHA N K
Sbjct: 1424 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAIVQHAKNEK 1483

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PALVFVPSRKYVRLTAVDLMTYSSMD D+K AFLL    EVEPFIDNIQEEML+ATLRHG
Sbjct: 1484 PALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPAEEVEPFIDNIQEEMLKATLRHG 1543

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLNK+DQEVVS LFEAGKIKVCVM+SSMCWGVPLTAHLVVVMGTQYYDGQENAH
Sbjct: 1544 VGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAHLVVVMGTQYYDGQENAH 1603

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLY+AFPVESH+HHFLHDNF
Sbjct: 1604 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVESHLHHFLHDNF 1663

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAGVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT+SDL
Sbjct: 1664 NAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTISDL 1723

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI+IE+DMDLSPSNHGMIA         IERFSSSLTPKT+MKGLLEVLASASEY
Sbjct: 1724 EASKCIIIEEDMDLSPSNHGMIASYYYISYTTIERFSSSLTPKTRMKGLLEVLASASEY 1782



 Score =  257 bits (656), Expect = 3e-65
 Identities = 162/516 (31%), Positives = 274/516 (53%), Gaps = 15/516 (2%)
 Frame = -3

Query: 1749 GSQTILPVSFRHLILP----EKYPPPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQT 1582
            GSQ      +  + +P    +   P  +L+ +  +P  A      +  ++G    N +Q+
Sbjct: 356  GSQRFTNKGYEEIHVPAMKHKPLDPNEKLIKISEMPEWA------QPAFKGMTQLNRVQS 409

Query: 1581 QVFTVLYNTDDNVLVAAPTGSGKT------ICAEFAVLRNHQKASESGVMRAVYIAPVEA 1420
            +V+    ++ DN+L+ APTG+GKT      I  + A+ RN   +      + VY+AP++A
Sbjct: 410  RVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHSNYKIVYVAPMKA 469

Query: 1419 LAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKY 1240
            L  E   +   +  +   ++V EL+G+  +  + +E+ QII++TPEKWD ++R+   R Y
Sbjct: 470  LVAEVVGNLSNRL-QMYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTY 528

Query: 1239 VQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEW 1063
             Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS +L N +D+  +
Sbjct: 529  TQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALF 587

Query: 1062 IGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALV 886
            +      GLF F    RPVPL     G+ +     R Q M    +  +V  A   +  L+
Sbjct: 588  LRVNLEKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMNDLCYEKVVAVAGKHQ-VLI 646

Query: 885  FVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVE---VEPFIDNIQEEMLRATLRHGV 715
            FV SRK    TA  +   ++++ D    FL    V    ++   D ++   L+  L +G 
Sbjct: 647  FVHSRKETAKTARAIRD-TALENDTLGRFLKEDSVSREILQSHTDMVKSNDLKDLLPYGF 705

Query: 714  GYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHT 535
               H G+ + D+++V  LF  G ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T
Sbjct: 706  AIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWT 765

Query: 534  DYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFN 355
            +    D++QM+G A RP  D+ G+ +I+       YY   + +  P+ES     L D  N
Sbjct: 766  ELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLN 825

Query: 354  AEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            AEIV G ++N +++ +++ +T++Y R+ +NP  Y L
Sbjct: 826  AEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGL 861


>ref|XP_006480405.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            isoform X1 [Citrus sinensis]
            gi|568853532|ref|XP_006480406.1| PREDICTED: U5 small
            nuclear ribonucleoprotein 200 kDa helicase-like isoform
            X2 [Citrus sinensis]
          Length = 2179

 Score = 1251 bits (3238), Expect = 0.0
 Identities = 613/659 (93%), Positives = 634/659 (96%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDF WDDKVHGYVEPFWVIVEDNDGEYILHHEYF+LKKQY+EEDH LNFTVPIYE
Sbjct: 1237 ELTITPDFLWDDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIEEDHSLNFTVPIYE 1296

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNP YEAL
Sbjct: 1297 PLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPLYEAL 1356

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTIC+EFA+LRNHQKASE+GVMRAVY
Sbjct: 1357 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICSEFAILRNHQKASETGVMRAVY 1416

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EALAKER+RDW  KFG+GLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR
Sbjct: 1417 IAPLEALAKERYRDWEIKFGQGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1476

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1477 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAK 1536

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPT TAIVQHA N K
Sbjct: 1537 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTFTAIVQHAKNEK 1596

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PALVFVPSRKYVRLTAVDLMTYSSMD D+K AFLL    EVEPFIDNIQEEML+ATLRHG
Sbjct: 1597 PALVFVPSRKYVRLTAVDLMTYSSMDGDQKSAFLLWPAEEVEPFIDNIQEEMLKATLRHG 1656

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLNK+DQEVVS LFEAGKIKVCVM+SSMCWGVPLTAHLVVVMGTQYYDGQENAH
Sbjct: 1657 VGYLHEGLNKTDQEVVSALFEAGKIKVCVMSSSMCWGVPLTAHLVVVMGTQYYDGQENAH 1716

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLY+AFPVESH+HHFLHDNF
Sbjct: 1717 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYDAFPVESHLHHFLHDNF 1776

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAGVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT+SDL
Sbjct: 1777 NAEIVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTISDL 1836

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI+IE+DMDLSPSNHGMIA         IERFSSSLTPKT+MKGLLEVLASASEY
Sbjct: 1837 EASKCIIIEEDMDLSPSNHGMIASYYYISYTTIERFSSSLTPKTRMKGLLEVLASASEY 1895



 Score =  257 bits (656), Expect = 3e-65
 Identities = 162/516 (31%), Positives = 274/516 (53%), Gaps = 15/516 (2%)
 Frame = -3

Query: 1749 GSQTILPVSFRHLILP----EKYPPPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQT 1582
            GSQ      +  + +P    +   P  +L+ +  +P  A      +  ++G    N +Q+
Sbjct: 469  GSQRFTNKGYEEIHVPAMKHKPLDPNEKLIKISEMPEWA------QPAFKGMTQLNRVQS 522

Query: 1581 QVFTVLYNTDDNVLVAAPTGSGKT------ICAEFAVLRNHQKASESGVMRAVYIAPVEA 1420
            +V+    ++ DN+L+ APTG+GKT      I  + A+ RN   +      + VY+AP++A
Sbjct: 523  RVYKSALSSADNILLCAPTGAGKTNVAVLTILQQLALNRNDDGSFNHSNYKIVYVAPMKA 582

Query: 1419 LAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKY 1240
            L  E   +   +  +   ++V EL+G+  +  + +E+ QII++TPEKWD ++R+   R Y
Sbjct: 583  LVAEVVGNLSNRL-QMYDVKVRELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTY 641

Query: 1239 VQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEW 1063
             Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS +L N +D+  +
Sbjct: 642  TQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALF 700

Query: 1062 IGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALV 886
            +      GLF F    RPVPL     G+ +     R Q M    +  +V  A   +  L+
Sbjct: 701  LRVNLEKGLFYFDNSYRPVPLSQQYIGIQVKKPLQRFQLMNDLCYEKVVAVAGKHQ-VLI 759

Query: 885  FVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVE---VEPFIDNIQEEMLRATLRHGV 715
            FV SRK    TA  +   ++++ D    FL    V    ++   D ++   L+  L +G 
Sbjct: 760  FVHSRKETAKTARAIRD-TALENDTLGRFLKEDSVSREILQSHTDMVKSNDLKDLLPYGF 818

Query: 714  GYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHT 535
               H G+ + D+++V  LF  G ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T
Sbjct: 819  AIHHAGMTRGDRQLVEDLFGDGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWT 878

Query: 534  DYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFN 355
            +    D++QM+G A RP  D+ G+ +I+       YY   + +  P+ES     L D  N
Sbjct: 879  ELSPLDIMQMLGRAGRPQYDSYGEGIIITGHSELRYYLSLMNQQLPIESQFVSKLADQLN 938

Query: 354  AEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            AEIV G ++N +++ +++ +T++Y R+ +NP  Y L
Sbjct: 939  AEIVLGTVQNAKEACNWIGYTYLYIRMLRNPALYGL 974


>ref|XP_002518663.1| U520, putative [Ricinus communis] gi|223542044|gb|EEF43588.1| U520,
            putative [Ricinus communis]
          Length = 1809

 Score = 1198 bits (3100), Expect = 0.0
 Identities = 582/659 (88%), Positives = 621/659 (94%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDH LNFTVPIYE
Sbjct: 865  ELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYE 924

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 925  PLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 984

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S V RAVY
Sbjct: 985  YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-VTRAVY 1043

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW RKFG+GLGMRVVELTGETA DLKLLEK QIIISTPEKWDALSRR
Sbjct: 1044 IAPLEAIAKERYRDWERKFGRGLGMRVVELTGETATDLKLLEKSQIIISTPEKWDALSRR 1103

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVSLFIIDELHLIGGQGGP+LEVIVSRMRYI SQ++NKIRIVALS+SLANAK
Sbjct: 1104 WKQRKYVQQVSLFIIDELHLIGGQGGPILEVIVSRMRYIASQIENKIRIVALSSSLANAK 1163

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA NGK
Sbjct: 1164 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK 1223

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVDLMTYSS D+ EKPAF++ S  E+EPF+  +Q+EMLR+TLR G
Sbjct: 1224 PAIVFVPTRKHVRLTAVDLMTYSSADSGEKPAFMMRSIEELEPFVGRVQDEMLRSTLRQG 1283

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL+  DQEVVS LFEAG I+VCVM+SSMCWGVPL AHLVVVMGTQYYDG+ENAH
Sbjct: 1284 VGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLAAHLVVVMGTQYYDGRENAH 1343

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1344 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1403

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAE+VAGVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL
Sbjct: 1404 NAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 1463

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IE+DMDLSP N GMIA         IERFSSSLT KT+MKGLLE+LASASEY
Sbjct: 1464 EASKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTRMKGLLEILASASEY 1522



 Score =  255 bits (652), Expect = 9e-65
 Identities = 157/469 (33%), Positives = 260/469 (55%), Gaps = 12/469 (2%)
 Frame = -3

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLR------NHQKAS-ES 1459
            ++G +  N +Q++V+       DNVL+ APTG+GKT  A   +L+      N +  S   
Sbjct: 138  FKGMQQLNRVQSRVYETALFKADNVLLCAPTGAGKTNVAVLTILQQLGLKMNKEDGSFNH 197

Query: 1458 GVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEK 1279
               + VY+AP++AL  E   +   +  +  G++V EL+G+ ++  + +E+ QII++TPEK
Sbjct: 198  SDYKIVYVAPMKALVAEVVGNLSNRLQE-YGVKVRELSGDQSLTRQQIEETQIIVTTPEK 256

Query: 1278 WDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVAL 1102
            WD ++R+   R Y Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V L
Sbjct: 257  WDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGL 315

Query: 1101 STSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTA 925
            S +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    +  
Sbjct: 316  SATLPNYEDVALFLRVDLKKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEK 375

Query: 924  IVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLL---CSPVEVEPFIDNI 754
            ++  A   +  L+FV SRK    TA  +   S++  D    FL     S   ++   D +
Sbjct: 376  VMAVAGKHQ-VLIFVHSRKETAKTARAIRD-SALANDTLGRFLKEDSASREILQSHTDMV 433

Query: 753  QEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVM 574
            +   L+  L +G    H G+ ++D+++V  LF  G ++V V  +++ WGV L AH V++ 
Sbjct: 434  KSNDLKDLLPYGFAIHHAGMTRADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIK 493

Query: 573  GTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPV 394
            GTQ Y+ ++ A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+
Sbjct: 494  GTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHTELQYYLSLMNQQLPI 553

Query: 393  ESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            ES     L D  NAEIV G ++N +++ ++L +T++Y R+ +NP  Y L
Sbjct: 554  ESQFVSKLADQLNAEIVLGTVQNAREACNWLGYTYLYIRMLRNPTLYGL 602


>ref|XP_007010915.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 2
            [Theobroma cacao] gi|508727828|gb|EOY19725.1| U5 small
            nuclear ribonucleoprotein helicase, putative isoform 2
            [Theobroma cacao]
          Length = 2062

 Score = 1192 bits (3085), Expect = 0.0
 Identities = 581/659 (88%), Positives = 619/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVIVEDNDGEY+LHHEYFLLKKQY++EDH LNFTVPIYE
Sbjct: 1115 ELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHEYFLLKKQYIDEDHTLNFTVPIYE 1174

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1175 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1234

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S +MR VY
Sbjct: 1235 YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-IMRVVY 1293

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW +KFG+GLGMRVVELTGET+MDLKLLEKGQI+ISTPEKWDALSRR
Sbjct: 1294 IAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEKWDALSRR 1353

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVS+FI+DELHLIGGQGGPVLEVIVSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1354 WKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAK 1413

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TA+VQHA NGK
Sbjct: 1414 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAVVQHAKNGK 1473

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVDLM+YS +D +E PAF L S  E++PF+D I EE LR TL HG
Sbjct: 1474 PAIVFVPTRKHVRLTAVDLMSYSKVDNEE-PAFRLRSAEELKPFVDKISEETLRTTLEHG 1532

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  DQEVVS LFEAG I+VCVM+SS+CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1533 VGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAH 1592

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1593 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1652

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVA VIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL+DL
Sbjct: 1653 NAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDL 1712

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1713 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1771



 Score =  256 bits (653), Expect = 7e-65
 Identities = 160/503 (31%), Positives = 271/503 (53%), Gaps = 13/503 (2%)
 Frame = -3

Query: 1716 HLILPEKYPPPTE--LLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNV 1543
            H+  P+  P  ++  L+ +  +P  A      +  ++G +  N +Q++V+       DN+
Sbjct: 360  HVPAPKSKPLESDERLVKISEMPEWA------QPAFKGMQQLNRVQSKVYETALFAADNI 413

Query: 1542 LVAAPTGSGKTICAEFAVLRNHQKASES------GVMRAVYIAPVEALAKERFRDWGRKF 1381
            L+ APTG+GKT  A   +L+      +S         + VY+AP++AL  E   +   + 
Sbjct: 414  LLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRL 473

Query: 1380 GKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELH 1201
             +  G+ V EL+G+  +  + +++ QII++TPEKWD ++R+   R Y Q V L IIDE+H
Sbjct: 474  -EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIH 532

Query: 1200 LIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFP 1027
            L+    GPVLE IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F 
Sbjct: 533  LLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALFLRVDLKEGLFHFD 591

Query: 1026 PGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAV 847
               RPVPL     G+ +     R Q M    +  ++  A   +  L+FV SRK    TA 
Sbjct: 592  NSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETTKTAR 650

Query: 846  DLMTYSSMDTDEKPAFL---LCSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQE 676
             +   +++  D    FL     S   ++   D ++   L+  L +G    H GL ++D++
Sbjct: 651  AVRD-TALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQ 709

Query: 675  VVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGH 496
            +V  LF  G ++V V  +++ WGV L AH V++ GTQ Y  ++ A T+    D++QM+G 
Sbjct: 710  IVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 769

Query: 495  ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQD 316
            A RP  D+ G+ +I+      +YY   + +  P+ES     L D  NAEIV G ++N ++
Sbjct: 770  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 829

Query: 315  SVDYLTWTFMYRRLTQNPNYYNL 247
            + +++T+T++Y R+ +NP  Y L
Sbjct: 830  ACNWITYTYLYVRMLRNPTLYGL 852


>ref|XP_007010914.1| U5 small nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao] gi|508727827|gb|EOY19724.1| U5 small
            nuclear ribonucleoprotein helicase, putative isoform 1
            [Theobroma cacao]
          Length = 2176

 Score = 1192 bits (3085), Expect = 0.0
 Identities = 581/659 (88%), Positives = 619/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVIVEDNDGEY+LHHEYFLLKKQY++EDH LNFTVPIYE
Sbjct: 1229 ELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYVLHHEYFLLKKQYIDEDHTLNFTVPIYE 1288

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1289 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1348

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S +MR VY
Sbjct: 1349 YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-IMRVVY 1407

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW +KFG+GLGMRVVELTGET+MDLKLLEKGQI+ISTPEKWDALSRR
Sbjct: 1408 IAPLEAIAKERYRDWEKKFGRGLGMRVVELTGETSMDLKLLEKGQIVISTPEKWDALSRR 1467

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVS+FI+DELHLIGGQGGPVLEVIVSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1468 WKQRKYVQQVSVFIVDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAK 1527

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TA+VQHA NGK
Sbjct: 1528 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAVVQHAKNGK 1587

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVDLM+YS +D +E PAF L S  E++PF+D I EE LR TL HG
Sbjct: 1588 PAIVFVPTRKHVRLTAVDLMSYSKVDNEE-PAFRLRSAEELKPFVDKISEETLRTTLEHG 1646

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  DQEVVS LFEAG I+VCVM+SS+CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1647 VGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAH 1706

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1707 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1766

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVA VIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL+DL
Sbjct: 1767 NAEIVALVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDL 1826

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1827 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1885



 Score =  256 bits (653), Expect = 7e-65
 Identities = 160/503 (31%), Positives = 271/503 (53%), Gaps = 13/503 (2%)
 Frame = -3

Query: 1716 HLILPEKYPPPTE--LLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNV 1543
            H+  P+  P  ++  L+ +  +P  A      +  ++G +  N +Q++V+       DN+
Sbjct: 474  HVPAPKSKPLESDERLVKISEMPEWA------QPAFKGMQQLNRVQSKVYETALFAADNI 527

Query: 1542 LVAAPTGSGKTICAEFAVLRNHQKASES------GVMRAVYIAPVEALAKERFRDWGRKF 1381
            L+ APTG+GKT  A   +L+      +S         + VY+AP++AL  E   +   + 
Sbjct: 528  LLCAPTGAGKTNVAVLTILQQLALNMDSDGSINHSNYKIVYVAPMKALVAEVVGNLSHRL 587

Query: 1380 GKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELH 1201
             +  G+ V EL+G+  +  + +++ QII++TPEKWD ++R+   R Y Q V L IIDE+H
Sbjct: 588  -EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIH 646

Query: 1200 LIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFP 1027
            L+    GPVLE IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F 
Sbjct: 647  LLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALFLRVDLKEGLFHFD 705

Query: 1026 PGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAV 847
               RPVPL     G+ +     R Q M    +  ++  A   +  L+FV SRK    TA 
Sbjct: 706  NSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETTKTAR 764

Query: 846  DLMTYSSMDTDEKPAFL---LCSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQE 676
             +   +++  D    FL     S   ++   D ++   L+  L +G    H GL ++D++
Sbjct: 765  AVRD-TALANDTLSRFLKEDAASREILQSHTDMVKSNDLKDLLPYGFAIHHAGLARTDRQ 823

Query: 675  VVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGH 496
            +V  LF  G ++V V  +++ WGV L AH V++ GTQ Y  ++ A T+    D++QM+G 
Sbjct: 824  IVEELFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYSPEKGAWTELSPLDVMQMLGR 883

Query: 495  ASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQD 316
            A RP  D+ G+ +I+      +YY   + +  P+ES     L D  NAEIV G ++N ++
Sbjct: 884  AGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNARE 943

Query: 315  SVDYLTWTFMYRRLTQNPNYYNL 247
            + +++T+T++Y R+ +NP  Y L
Sbjct: 944  ACNWITYTYLYVRMLRNPTLYGL 966


>ref|XP_011024026.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Populus euphratica]
          Length = 2184

 Score = 1191 bits (3080), Expect = 0.0
 Identities = 584/663 (88%), Positives = 618/663 (93%), Gaps = 4/663 (0%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEE----DHFLNFTV 1810
            ELTIT DFQW+D VHGYVEPFWVIVEDNDG+YILHHEYF+LKKQYV+E    D  LNFTV
Sbjct: 1232 ELTITADFQWEDNVHGYVEPFWVIVEDNDGDYILHHEYFMLKKQYVDEHQVVDLTLNFTV 1291

Query: 1809 PIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPS 1630
            PIYEPLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPS
Sbjct: 1292 PIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPS 1351

Query: 1629 YEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVM 1450
            YEALYQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  ES VM
Sbjct: 1352 YEALYQNFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPES-VM 1410

Query: 1449 RAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDA 1270
            RAVYIAP+EA+AKER+RDW RKFG+GLGMRVVELTGETA DLKLLEKGQIIISTPEKWDA
Sbjct: 1411 RAVYIAPLEAIAKERYRDWERKFGRGLGMRVVELTGETATDLKLLEKGQIIISTPEKWDA 1470

Query: 1269 LSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSL 1090
            LSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ++NKIRIVALS+SL
Sbjct: 1471 LSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSSSL 1530

Query: 1089 ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHA 910
            ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+T+I+QHA
Sbjct: 1531 ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIIQHA 1590

Query: 909  NNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRAT 730
             NGKPA+VFVP+RK+VRL AVDLMTYSSMD  EKP FLL S  E+EPF+  IQEEMLRAT
Sbjct: 1591 KNGKPAIVFVPTRKHVRLAAVDLMTYSSMDGGEKPPFLLRSIEELEPFVGKIQEEMLRAT 1650

Query: 729  LRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQ 550
            L HGVGYLHEGL+  DQEVVS LFEAG I+VCVM+SSMCWGVPL+AHLVVVMGTQYYDGQ
Sbjct: 1651 LHHGVGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLSAHLVVVMGTQYYDGQ 1710

Query: 549  ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFL 370
            ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVI CHAPRKEYYKKFLYEAFPVESH+HHFL
Sbjct: 1711 ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVIFCHAPRKEYYKKFLYEAFPVESHLHHFL 1770

Query: 369  HDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT 190
            HDNFNAE+VAGVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT
Sbjct: 1771 HDNFNAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT 1830

Query: 189  LSDLEASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASA 10
            L+DLE SKC+ IE+DMDLSP N GMIA         IERFSSSLTPKTKMKGLLE+L+SA
Sbjct: 1831 LTDLERSKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTKMKGLLEILSSA 1890

Query: 9    SEY 1
            SEY
Sbjct: 1891 SEY 1893



 Score =  258 bits (660), Expect = 1e-65
 Identities = 160/493 (32%), Positives = 269/493 (54%), Gaps = 11/493 (2%)
 Frame = -3

Query: 1692 PPPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGK 1513
            PP  + + +  +P  A      +  ++G +  N +Q++V+       DNVL+ APTG+GK
Sbjct: 487  PPDEKFVKISEMPDWA------QPAFKGMQQLNRVQSKVYETALFKADNVLLCAPTGAGK 540

Query: 1512 T------ICAEFAVLRNHQKASESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVE 1351
            T      I  + A+ RN   +  +   + VY+AP++AL  E   +   +  +  G++V E
Sbjct: 541  TNVAVLTILQQIALNRNPDGSFNNSNYKIVYVAPMKALVAEVVGNLSNRL-QDYGVQVKE 599

Query: 1350 LTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVL 1171
            L+G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V L IIDE+HL+    GPVL
Sbjct: 600  LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 659

Query: 1170 EVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEI 997
            E IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F    RPVPL  
Sbjct: 660  ESIVARTVRQIETTKEH-IRLVGLSATLPNFEDVALFLRVDLDKGLFHFDNSYRPVPLSQ 718

Query: 996  HIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDT 817
               G++I     R Q M    +  ++  A   +  L+FV SRK    TA  +   +++  
Sbjct: 719  QYIGINIKKPLQRFQLMNDICYEKVMDVAGKHQ-VLIFVHSRKETAKTARAIRD-TALAN 776

Query: 816  DEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGK 646
            D    FL     S   ++   + ++   L+  L +G    H G+ + D+++V  LF  G 
Sbjct: 777  DTLSRFLREDSASREILQTHTELVKSNDLKDLLPYGFAVHHAGMTRGDRQLVEDLFADGH 836

Query: 645  IKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSG 466
            ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  D+ G
Sbjct: 837  VQVLVSTATLAWGVNLPAHPVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 896

Query: 465  KCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFM 286
            + +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++  +L +T++
Sbjct: 897  EGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYL 956

Query: 285  YRRLTQNPNYYNL 247
            Y R+ +NP  Y L
Sbjct: 957  YIRMLRNPTLYGL 969


>ref|XP_012073544.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Jatropha curcas] gi|643728789|gb|KDP36726.1|
            hypothetical protein JCGZ_08017 [Jatropha curcas]
          Length = 2179

 Score = 1190 bits (3079), Expect = 0.0
 Identities = 578/659 (87%), Positives = 620/659 (94%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDH LNFTVPIYE
Sbjct: 1231 ELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYE 1290

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PL PQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1291 PLSPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1350

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDN+LVAAPTGSGKTICAEFA+LRN QK  +S +MRAVY
Sbjct: 1351 YQDFKHFNPVQTQVFTVLYNTDDNILVAAPTGSGKTICAEFAILRNLQKGPDS-IMRAVY 1409

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW RKFG+GLG+RVVELTGETA DLKLLEKGQIIISTPEKWDALSRR
Sbjct: 1410 IAPLEAIAKERYRDWERKFGQGLGIRVVELTGETATDLKLLEKGQIIISTPEKWDALSRR 1469

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ++NKIRIVALS+SLANA+
Sbjct: 1470 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSSSLANAR 1529

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPP VRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA NGK
Sbjct: 1530 DLGEWIGATSHGLFNFPPTVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK 1589

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+V+LTAVDLMTYSS+D+ EKPAF+L S  E+EPF+  IQ+ ML+ATL HG
Sbjct: 1590 PAIVFVPTRKHVQLTAVDLMTYSSVDSGEKPAFMLRSSEELEPFVGKIQDGMLKATLLHG 1649

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL   DQEVVS LFEAG I+VCVM+SSMCWGVPL+AHLV+VMGTQYYDG+ENAH
Sbjct: 1650 VGYLHEGLRSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLSAHLVIVMGTQYYDGRENAH 1709

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1710 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1769

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAE+VAGVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL DL
Sbjct: 1770 NAEVVAGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLKDL 1829

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IE+DMDLSP N GMIA         IERFSSSLTPKTKMKGLLE+LASASEY
Sbjct: 1830 EASKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTKMKGLLEILASASEY 1888



 Score =  258 bits (658), Expect = 2e-65
 Identities = 160/497 (32%), Positives = 267/497 (53%), Gaps = 11/497 (2%)
 Frame = -3

Query: 1704 PEKYPPPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPT 1525
            P    P   L+ +  +P  A      +  ++G +  N +Q++V+       DN+L+ APT
Sbjct: 482  PRPLEPDERLVKISDMPDWA------QPAFKGMQQLNRVQSKVYETALFKADNILLCAPT 535

Query: 1524 GSGKT------ICAEFAVLRNHQKASESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGM 1363
            G+GKT      I  + A+ RN   +      + VY+AP++AL  E   +   +  +  G+
Sbjct: 536  GAGKTNVAVLTILQQIALNRNPDGSFNHSNYKIVYVAPMKALVAEVVGNLSNRLQE-YGV 594

Query: 1362 RVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQG 1183
            +V EL+G+  +  + +E+ QII++TPEKWD ++R+   R Y Q V L IIDE+HL+    
Sbjct: 595  KVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR 654

Query: 1182 GPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGA-TSHGLFNFPPGVRPV 1009
            GPVLE IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F    RPV
Sbjct: 655  GPVLESIVARTVRQIETTKEH-IRLVGLSATLPNFEDVALFLRVDVEKGLFHFDNSYRPV 713

Query: 1008 PLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYS 829
            PL     G+ +     R Q M    +  ++  A   +  L+FV SRK    TA  +   +
Sbjct: 714  PLTQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD-T 771

Query: 828  SMDTDEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLF 658
            ++  D    FL     S   ++   D ++   L+  L +G    H G+ + D+++V  LF
Sbjct: 772  ALANDTLGRFLREDSASREILQSHTDMVKSNDLKDLLPYGFAVHHAGMTRVDRQLVEDLF 831

Query: 657  EAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLL 478
              G ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  
Sbjct: 832  ADGHVQVLVSTATLAWGVNLPAHSVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQF 891

Query: 477  DNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLT 298
            D+ G+ +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++ ++L 
Sbjct: 892  DSYGEGIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWLG 951

Query: 297  WTFMYRRLTQNPNYYNL 247
            +T++Y R+ +NP  Y L
Sbjct: 952  YTYLYVRMLRNPTLYGL 968


>ref|XP_002322252.1| U5 small nuclear ribonucleoprotein helicase [Populus trichocarpa]
            gi|222869248|gb|EEF06379.1| U5 small nuclear
            ribonucleoprotein helicase [Populus trichocarpa]
          Length = 2157

 Score = 1187 bits (3071), Expect = 0.0
 Identities = 583/663 (87%), Positives = 617/663 (93%), Gaps = 4/663 (0%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEE----DHFLNFTV 1810
            ELTIT DFQW+D VHGYVEPFWVIVEDNDG+YILHHEYF+LKKQYV+E    D  LNFTV
Sbjct: 1205 ELTITADFQWEDNVHGYVEPFWVIVEDNDGDYILHHEYFMLKKQYVDEHQVVDLTLNFTV 1264

Query: 1809 PIYEPLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPS 1630
            PIYEPLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPS
Sbjct: 1265 PIYEPLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPS 1324

Query: 1629 YEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVM 1450
            YEALYQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  ES VM
Sbjct: 1325 YEALYQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPES-VM 1383

Query: 1449 RAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDA 1270
            RAVYIAP+EA+A+ER+RDW RKFG+GLGMRVVELTGETA DLKLLEKGQIIISTPEKWDA
Sbjct: 1384 RAVYIAPLEAIARERYRDWERKFGRGLGMRVVELTGETATDLKLLEKGQIIISTPEKWDA 1443

Query: 1269 LSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSL 1090
            LSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ++NKIRIVALS+SL
Sbjct: 1444 LSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSSSL 1503

Query: 1089 ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHA 910
            ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+T+IVQHA
Sbjct: 1504 ANAKDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIVQHA 1563

Query: 909  NNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRAT 730
             NGKPA+VFVP+RK+VRL AVDLMTYSSMD  EKP FLL S  E+EPFI  IQEEMLRAT
Sbjct: 1564 KNGKPAIVFVPTRKHVRLAAVDLMTYSSMDGGEKPPFLLRSIEELEPFIGKIQEEMLRAT 1623

Query: 729  LRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQ 550
            L HG+GYLHEGL+  DQEVVS LFEAG I+VCVM+SSMCWGVPL+AHLVVVMGTQYYDGQ
Sbjct: 1624 LHHGIGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSSMCWGVPLSAHLVVVMGTQYYDGQ 1683

Query: 549  ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFL 370
            ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVI CHAPRKEYYKKFLYEAFPVESH+HHFL
Sbjct: 1684 ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVIFCHAPRKEYYKKFLYEAFPVESHLHHFL 1743

Query: 369  HDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT 190
            HDNFNAE+VAGVIENKQD+VDYLTWTF YRRLTQNPNYYNLQGVSHRHLSDHLSELVENT
Sbjct: 1744 HDNFNAEVVAGVIENKQDAVDYLTWTFTYRRLTQNPNYYNLQGVSHRHLSDHLSELVENT 1803

Query: 189  LSDLEASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASA 10
            L+DLE SKC+ IE+DMDLSP N GMIA         IERFSSSLTPKTKMKGLLE+L+SA
Sbjct: 1804 LTDLERSKCVAIEEDMDLSPLNLGMIASYYYISYTTIERFSSSLTPKTKMKGLLEILSSA 1863

Query: 9    SEY 1
            SEY
Sbjct: 1864 SEY 1866



 Score =  224 bits (570), Expect = 3e-55
 Identities = 152/493 (30%), Positives = 250/493 (50%), Gaps = 11/493 (2%)
 Frame = -3

Query: 1692 PPPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGK 1513
            PP    + +  +P  A      +  ++G +  N +Q++V+       DNVL+ APTG+GK
Sbjct: 487  PPDERFVKISEMPDWA------QPAFKGMQQLNRVQSKVYETALFKADNVLLCAPTGAGK 540

Query: 1512 T------ICAEFAVLRNHQKASESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVE 1351
            T      I  + A+ RN   +  +   + VY+AP++AL                   V E
Sbjct: 541  TNVAVLTILQQIALNRNPDGSFNNNNYKIVYVAPMKAL-------------------VAE 581

Query: 1350 LTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVL 1171
            + G   +  +L E G        +WD ++R+   R Y Q V L IIDE+HL+    GPVL
Sbjct: 582  VVGN--LSNRLQEYGV-------QWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 632

Query: 1170 EVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEI 997
            E IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F    RPVPL  
Sbjct: 633  ESIVARTVRQIETTKEH-IRLVGLSATLPNFEDVALFLRVDLDKGLFHFDNSYRPVPLSQ 691

Query: 996  HIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDT 817
               G++I     R Q M    +  ++  A   +  L+FV SRK    TA  +   +++  
Sbjct: 692  QYIGINIKKPLQRFQLMNDICYEKVMDVAGKHQ-VLIFVHSRKETAKTARAIRD-TALAN 749

Query: 816  DEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGK 646
            D    FL     S   ++   + ++   L+  L +G    H G+ + D+++V  LF  G 
Sbjct: 750  DTLSRFLREDSASREILQTHTELVKSNDLKDLLPYGFAVHHAGMTRGDRQLVEDLFADGH 809

Query: 645  IKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSG 466
            ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  D+ G
Sbjct: 810  VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 869

Query: 465  KCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFM 286
            + +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++  +L +T++
Sbjct: 870  EGIIITGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAREACHWLGYTYL 929

Query: 285  YRRLTQNPNYYNL 247
            Y R+ +NP  Y L
Sbjct: 930  YIRMLRNPTLYGL 942


>ref|XP_002266580.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera] gi|731390985|ref|XP_010650581.1| PREDICTED: U5
            small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera] gi|731390987|ref|XP_010650582.1| PREDICTED: U5
            small nuclear ribonucleoprotein 200 kDa helicase [Vitis
            vinifera]
          Length = 2177

 Score = 1186 bits (3067), Expect = 0.0
 Identities = 580/659 (88%), Positives = 615/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHG+VEPFWVIVEDNDGEYILHHEYF++KKQY++E H LNFTVPIYE
Sbjct: 1232 ELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYE 1291

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSD+WLGSQ++LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1292 PLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1351

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK SES ++RAVY
Sbjct: 1352 YQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSES-IVRAVY 1410

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EALAKER+RDW RKFG+GLGMRVVELTGETA DLKLLE+GQ+IISTPEKWDALSRR
Sbjct: 1411 IAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRR 1470

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ +NKIRIVALSTSLANAK
Sbjct: 1471 WKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQGENKIRIVALSTSLANAK 1530

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA N K
Sbjct: 1531 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRK 1590

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVDL TYSS D  E P FLL SP E+EPF+  IQEEMLRATLRHG
Sbjct: 1591 PAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSPEELEPFVGKIQEEMLRATLRHG 1650

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL   DQEVVS LFEAG I+VCVM+SS+CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1651 VGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAH 1710

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+ H+LHDN 
Sbjct: 1711 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNL 1770

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIV GVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSE VENTLSDL
Sbjct: 1771 NAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDL 1830

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1831 EASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1889



 Score =  254 bits (649), Expect = 2e-64
 Identities = 164/524 (31%), Positives = 282/524 (53%), Gaps = 11/524 (2%)
 Frame = -3

Query: 1689 PPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 1510
            P  EL+ +  +P  A      +  ++G    N +Q++V+     T +NVL+ APTG+GKT
Sbjct: 488  PGEELVKISAMPDWA------QPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKT 541

Query: 1509 ------ICAEFAVLRNHQKASESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVEL 1348
                  I  + A+ RN   +      + VY+AP++AL  E   +   +  +   ++V EL
Sbjct: 542  NVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKEL 600

Query: 1347 TGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLE 1168
            +G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V L I+DE+HL+    GPVLE
Sbjct: 601  SGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLE 660

Query: 1167 VIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIH 994
             IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F    RP PL   
Sbjct: 661  SIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQ 719

Query: 993  IQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTD 814
              G+ +     R Q M    +  ++  A   +  L+FV SRK    TA  +   +++  D
Sbjct: 720  YIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD-TALAND 777

Query: 813  EKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKI 643
                FL     S   +    + ++   L+  L +G    H G+ ++D+++V  LF  G +
Sbjct: 778  TLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHV 837

Query: 642  KVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGK 463
            +V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  D+ G+
Sbjct: 838  QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGE 897

Query: 462  CVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMY 283
             +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++  ++ +T++Y
Sbjct: 898  GIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLY 957

Query: 282  RRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCILIE 151
             R+ +NP  Y   G+SH  L+  ++  +E   +DL  S  I+++
Sbjct: 958  VRMLRNPTLY---GLSHDALTRDIT--LEERRADLIHSAAIILD 996


>emb|CAN75158.1| hypothetical protein VITISV_042645 [Vitis vinifera]
          Length = 2144

 Score = 1186 bits (3067), Expect = 0.0
 Identities = 580/659 (88%), Positives = 615/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHG+VEPFWVIVEDNDGEYILHHEYF++KKQY++E H LNFTVPIYE
Sbjct: 1199 ELTITPDFQWEDKVHGFVEPFWVIVEDNDGEYILHHEYFMMKKQYIDEVHTLNFTVPIYE 1258

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSD+WLGSQ++LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1259 PLPPQYFIRVVSDRWLGSQSVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1318

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK SES ++RAVY
Sbjct: 1319 YQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGSES-IVRAVY 1377

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EALAKER+RDW RKFG+GLGMRVVELTGETA DLKLLE+GQ+IISTPEKWDALSRR
Sbjct: 1378 IAPIEALAKERYRDWERKFGRGLGMRVVELTGETATDLKLLERGQVIISTPEKWDALSRR 1437

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ +NKIRIVALSTSLANAK
Sbjct: 1438 WKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQGENKIRIVALSTSLANAK 1497

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA N K
Sbjct: 1498 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNRK 1557

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVDL TYSS D  E P FLL SP E+EPF+  IQEEMLRATLRHG
Sbjct: 1558 PAIVFVPTRKHVRLTAVDLTTYSSADGGENPTFLLRSPEELEPFVGKIQEEMLRATLRHG 1617

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL   DQEVVS LFEAG I+VCVM+SS+CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1618 VGYLHEGLTGMDQEVVSQLFEAGWIQVCVMSSSLCWGVPLSAHLVVVMGTQYYDGRENAH 1677

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+ H+LHDN 
Sbjct: 1678 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNL 1737

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIV GVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSE VENTLSDL
Sbjct: 1738 NAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSESVENTLSDL 1797

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1798 EASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1856



 Score =  254 bits (649), Expect = 2e-64
 Identities = 164/524 (31%), Positives = 282/524 (53%), Gaps = 11/524 (2%)
 Frame = -3

Query: 1689 PPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 1510
            P  EL+ +  +P  A      +  ++G    N +Q++V+     T +NVL+ APTG+GKT
Sbjct: 455  PGEELVKISAMPDWA------QPAFKGMTQLNRVQSKVYETALFTAENVLLCAPTGAGKT 508

Query: 1509 ------ICAEFAVLRNHQKASESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVEL 1348
                  I  + A+ RN   +      + VY+AP++AL  E   +   +  +   ++V EL
Sbjct: 509  NVAMLTILQQIALNRNADGSFNHSNYKIVYVAPMKALVAEVVGNLSNRL-QHYDVKVKEL 567

Query: 1347 TGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLE 1168
            +G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V L I+DE+HL+    GPVLE
Sbjct: 568  SGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIVDEIHLLHDNRGPVLE 627

Query: 1167 VIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIH 994
             IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F    RP PL   
Sbjct: 628  SIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALFLRVDLKKGLFHFDNSYRPCPLAQQ 686

Query: 993  IQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTD 814
              G+ +     R Q M    +  ++  A   +  L+FV SRK    TA  +   +++  D
Sbjct: 687  YIGITVKKPLQRFQLMNDVCYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD-TALAND 744

Query: 813  EKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKI 643
                FL     S   +    + ++   L+  L +G    H G+ ++D+++V  LF  G +
Sbjct: 745  TLGRFLKEDSASREILHSHTELVKNNDLKDLLPYGFAIHHAGMARADRQLVEELFADGHV 804

Query: 642  KVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGK 463
            +V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  D+ G+
Sbjct: 805  QVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYGE 864

Query: 462  CVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMY 283
             +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++  ++ +T++Y
Sbjct: 865  GIIITGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACSWIGYTYLY 924

Query: 282  RRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDLEASKCILIE 151
             R+ +NP  Y   G+SH  L+  ++  +E   +DL  S  I+++
Sbjct: 925  VRMLRNPTLY---GLSHDALTRDIT--LEERRADLIHSAAIILD 963


>gb|KJB73065.1| hypothetical protein B456_011G217300 [Gossypium raimondii]
          Length = 2053

 Score = 1183 bits (3061), Expect = 0.0
 Identities = 574/659 (87%), Positives = 615/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVI+EDNDGEYILHHEYFLLKKQY++EDH LNFTVPIYE
Sbjct: 1105 ELTITPDFQWEDKVHGYVEPFWVIIEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYE 1164

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LP+SFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1165 PLPPQYFIRVVSDKWLGSQTVLPISFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1224

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S  +R VY
Sbjct: 1225 YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-TLRVVY 1283

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW RKFGKGLGMRVVELTGE AMDLKLLEKGQ+IISTPEKWDALSRR
Sbjct: 1284 IAPLEAIAKERYRDWERKFGKGLGMRVVELTGELAMDLKLLEKGQVIISTPEKWDALSRR 1343

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRMRYI SQV+ KIRIVALSTSLANAK
Sbjct: 1344 WKQRKFVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYIASQVEKKIRIVALSTSLANAK 1403

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGA+SHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT TAIVQHA  GK
Sbjct: 1404 DLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTFTAIVQHAKGGK 1463

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+V+VP+RK+VRLTAVDLM+YS +D +++PAF L S  E++PF+D I EE LR TL +G
Sbjct: 1464 PAIVYVPTRKHVRLTAVDLMSYSKVDNEDEPAFRLRSAEELKPFVDKISEETLRTTLEYG 1523

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  DQEVVS LFEAG I+VCVM+S++CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1524 VGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSALCWGVPLSAHLVVVMGTQYYDGRENAH 1583

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1584 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1643

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVA VIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL+DL
Sbjct: 1644 NAEIVATVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLNDL 1703

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1704 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1762



 Score =  254 bits (649), Expect = 2e-64
 Identities = 155/468 (33%), Positives = 259/468 (55%), Gaps = 11/468 (2%)
 Frame = -3

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRN---HQKASES---G 1456
            ++G +  N +Q++V+     + DN+L+ APTG+GKT  A   +L+    +  A  S   G
Sbjct: 379  FKGMQQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHG 438

Query: 1455 VMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1276
              + VY+AP++AL  E   +   +  +  G+ V EL+G+  +  + +++ QII++TPEKW
Sbjct: 439  NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 497

Query: 1275 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALS 1099
            D ++R+   R Y Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS
Sbjct: 498  DIITRKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLS 556

Query: 1098 TSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAI 922
             +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    +  +
Sbjct: 557  ATLPNFEDVALFLRVNFEKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKV 616

Query: 921  VQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFL---LCSPVEVEPFIDNIQ 751
            +  A   +  L+FV SRK    TA  +   +++  D    FL     S   ++   D ++
Sbjct: 617  MAVAGKHQ-VLIFVHSRKETAKTARAVRD-TALANDTLSRFLKEDAASREILQSHTDMVK 674

Query: 750  EEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMG 571
               L+  L +G    H GL ++D+++V  LF  G ++V V  +++ WGV L AH V++ G
Sbjct: 675  SNDLKDLLPYGFAIHHAGLARTDRQIVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKG 734

Query: 570  TQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVE 391
            TQ Y  ++ A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+E
Sbjct: 735  TQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 794

Query: 390  SHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            S     L D  NAEIV G ++N +++ +++ +T++Y R+ +NP  Y L
Sbjct: 795  SQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGL 842


>ref|XP_012454175.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Gossypium raimondii] gi|763806125|gb|KJB73063.1|
            hypothetical protein B456_011G217300 [Gossypium
            raimondii] gi|763806126|gb|KJB73064.1| hypothetical
            protein B456_011G217300 [Gossypium raimondii]
          Length = 2177

 Score = 1183 bits (3061), Expect = 0.0
 Identities = 574/659 (87%), Positives = 615/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVI+EDNDGEYILHHEYFLLKKQY++EDH LNFTVPIYE
Sbjct: 1229 ELTITPDFQWEDKVHGYVEPFWVIIEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYE 1288

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LP+SFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1289 PLPPQYFIRVVSDKWLGSQTVLPISFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1348

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S  +R VY
Sbjct: 1349 YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-TLRVVY 1407

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW RKFGKGLGMRVVELTGE AMDLKLLEKGQ+IISTPEKWDALSRR
Sbjct: 1408 IAPLEAIAKERYRDWERKFGKGLGMRVVELTGELAMDLKLLEKGQVIISTPEKWDALSRR 1467

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRMRYI SQV+ KIRIVALSTSLANAK
Sbjct: 1468 WKQRKFVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYIASQVEKKIRIVALSTSLANAK 1527

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGA+SHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT TAIVQHA  GK
Sbjct: 1528 DLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTFTAIVQHAKGGK 1587

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+V+VP+RK+VRLTAVDLM+YS +D +++PAF L S  E++PF+D I EE LR TL +G
Sbjct: 1588 PAIVYVPTRKHVRLTAVDLMSYSKVDNEDEPAFRLRSAEELKPFVDKISEETLRTTLEYG 1647

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  DQEVVS LFEAG I+VCVM+S++CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1648 VGYLHEGLNSLDQEVVSQLFEAGWIQVCVMSSALCWGVPLSAHLVVVMGTQYYDGRENAH 1707

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1708 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1767

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVA VIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL+DL
Sbjct: 1768 NAEIVATVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLNDL 1827

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1828 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1886



 Score =  254 bits (649), Expect = 2e-64
 Identities = 155/468 (33%), Positives = 259/468 (55%), Gaps = 11/468 (2%)
 Frame = -3

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRN---HQKASES---G 1456
            ++G +  N +Q++V+     + DN+L+ APTG+GKT  A   +L+    +  A  S   G
Sbjct: 503  FKGMQQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHG 562

Query: 1455 VMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1276
              + VY+AP++AL  E   +   +  +  G+ V EL+G+  +  + +++ QII++TPEKW
Sbjct: 563  NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 621

Query: 1275 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALS 1099
            D ++R+   R Y Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS
Sbjct: 622  DIITRKSGDRTYTQLVKLIIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLS 680

Query: 1098 TSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAI 922
             +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    +  +
Sbjct: 681  ATLPNFEDVALFLRVNFEKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKV 740

Query: 921  VQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFL---LCSPVEVEPFIDNIQ 751
            +  A   +  L+FV SRK    TA  +   +++  D    FL     S   ++   D ++
Sbjct: 741  MAVAGKHQ-VLIFVHSRKETAKTARAVRD-TALANDTLSRFLKEDAASREILQSHTDMVK 798

Query: 750  EEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMG 571
               L+  L +G    H GL ++D+++V  LF  G ++V V  +++ WGV L AH V++ G
Sbjct: 799  SNDLKDLLPYGFAIHHAGLARTDRQIVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKG 858

Query: 570  TQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVE 391
            TQ Y  ++ A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+E
Sbjct: 859  TQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 918

Query: 390  SHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            S     L D  NAEIV G ++N +++ +++ +T++Y R+ +NP  Y L
Sbjct: 919  SQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGL 966


>gb|KHG18677.1| U5 small nuclear ribonucleoprotein helicase [Gossypium arboreum]
          Length = 2177

 Score = 1182 bits (3059), Expect = 0.0
 Identities = 574/659 (87%), Positives = 615/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVI+EDNDGEYILHHEYFLLKKQY++EDH LNFTVPIYE
Sbjct: 1229 ELTITPDFQWEDKVHGYVEPFWVIIEDNDGEYILHHEYFLLKKQYIDEDHTLNFTVPIYE 1288

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LP+SFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1289 PLPPQYFIRVVSDKWLGSQTVLPISFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1348

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S  MR VY
Sbjct: 1349 YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-TMRVVY 1407

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EA+AKER+RDW RKFGKGLGMRVVELTGE AMDLKLLEKGQ+IISTPEKWDALSRR
Sbjct: 1408 IAPLEAIAKERYRDWERKFGKGLGMRVVELTGELAMDLKLLEKGQVIISTPEKWDALSRR 1467

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFI+DELHLIGGQGGPVLEVIVSRMRYI SQV+ KIRIVALSTSLANAK
Sbjct: 1468 WKQRKFVQQVSLFIVDELHLIGGQGGPVLEVIVSRMRYIASQVEKKIRIVALSTSLANAK 1527

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGA+SHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT TAIVQHA  GK
Sbjct: 1528 DLGEWIGASSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTFTAIVQHAKGGK 1587

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+V+VP+RK+VRLTAVDLM+YS +D +++PAF L S  E++PF+D I EE LR TL +G
Sbjct: 1588 PAIVYVPTRKHVRLTAVDLMSYSKVDNEDEPAFRLRSAEELKPFVDKISEETLRTTLEYG 1647

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL+  DQEVVS LFEAG I+VCVM+S++CWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1648 VGYLHEGLSSLDQEVVSQLFEAGWIQVCVMSSALCWGVPLSAHLVVVMGTQYYDGRENAH 1707

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDNF
Sbjct: 1708 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNF 1767

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVA VIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL+DL
Sbjct: 1768 NAEIVATVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLNDL 1827

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1828 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEILASASEY 1886



 Score =  254 bits (649), Expect = 2e-64
 Identities = 155/468 (33%), Positives = 259/468 (55%), Gaps = 11/468 (2%)
 Frame = -3

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRN---HQKASES---G 1456
            ++G +  N +Q++V+     + DN+L+ APTG+GKT  A   +L+    +  A  S   G
Sbjct: 503  FKGMQQLNRVQSKVYETALFSADNILLCAPTGAGKTNVAVLTILQQLALNMDADGSINHG 562

Query: 1455 VMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1276
              + VY+AP++AL  E   +   +  +  G+ V EL+G+  +  + +++ QII++TPEKW
Sbjct: 563  NYKIVYVAPMKALVAEVVGNLSHRL-EAYGVTVRELSGDQTLTRQQIDETQIIVTTPEKW 621

Query: 1275 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALS 1099
            D ++R+   R Y Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS
Sbjct: 622  DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLS 680

Query: 1098 TSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAI 922
             +L N +D+  ++      GLF+F    RPVPL     G+ +     R Q M    +  +
Sbjct: 681  ATLPNFEDVALFLRVNFEKGLFHFDNSYRPVPLSQQYIGITVKKPLQRFQLMNDICYEKV 740

Query: 921  VQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFL---LCSPVEVEPFIDNIQ 751
            +  A   +  L+FV SRK    TA  +   +++  D    FL     S   ++   D ++
Sbjct: 741  MAVAGKHQ-VLIFVHSRKETAKTARAVRD-TALANDTLSRFLKEDAASREILQSHTDMVK 798

Query: 750  EEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMG 571
               L+  L +G    H GL ++D+++V  LF  G ++V V  +++ WGV L AH V++ G
Sbjct: 799  SNDLKDLLPYGFAIHHAGLARTDRQIVEELFGDGHVQVLVSTATLAWGVNLPAHTVIIKG 858

Query: 570  TQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVE 391
            TQ Y  ++ A T+    D++QM+G A RP  D+ G+ +I+      +YY   + +  P+E
Sbjct: 859  TQIYSPEKGAWTELSPLDVMQMLGRAGRPQYDSYGEGIIITGHSELQYYLSLMNQQLPIE 918

Query: 390  SHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            S     L D  NAEIV G ++N +++ +++ +T++Y R+ +NP  Y L
Sbjct: 919  SQFISKLADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGL 966


>ref|XP_010270595.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Nelumbo nucifera] gi|720046748|ref|XP_010270596.1|
            PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa
            helicase-like [Nelumbo nucifera]
          Length = 2177

 Score = 1176 bits (3042), Expect = 0.0
 Identities = 578/659 (87%), Positives = 610/659 (92%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            EL ITPDFQW+DKVHGYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDH LNF VPIYE
Sbjct: 1232 ELMITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFIVPIYE 1291

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSD+WLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1292 PLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1351

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  ES  MRAVY
Sbjct: 1352 YQEFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPES-TMRAVY 1410

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EALAKER RDW RKFGKGLGMRVVEL GETA DLKLLEKGQIIISTPEKWDALSRR
Sbjct: 1411 IAPIEALAKERCRDWERKFGKGLGMRVVELIGETATDLKLLEKGQIIISTPEKWDALSRR 1470

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGG GGPVLEVIVSRMRYI SQ +NKIRIVALSTSLANAK
Sbjct: 1471 WKQRKHVQQVSLFIIDELHLIGGLGGPVLEVIVSRMRYIASQGENKIRIVALSTSLANAK 1530

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA NGK
Sbjct: 1531 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK 1590

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PALVFVP+RK+ RLTAVDLMTYSS+D+ EKPAFLL    E+EPFI  ++E ML  TLRHG
Sbjct: 1591 PALVFVPTRKHARLTAVDLMTYSSVDSGEKPAFLLRPVEELEPFISKVKEPMLSETLRHG 1650

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL+  DQEVVS LFEAG I+VCV +SSMCWG+PL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1651 VGYLHEGLSSIDQEVVSHLFEAGWIQVCVASSSMCWGMPLSAHLVVVMGTQYYDGRENAH 1710

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+ H+LHDN 
Sbjct: 1711 TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHYLHDNL 1770

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIV GVIENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTL+DL
Sbjct: 1771 NAEIVVGVIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLTDL 1830

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IED+MDLSP N GMIA         IERFSSSLT KTKMKGLL++LASASEY
Sbjct: 1831 EASKCVTIEDEMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLDILASASEY 1889



 Score =  247 bits (630), Expect = 3e-62
 Identities = 157/497 (31%), Positives = 263/497 (52%), Gaps = 11/497 (2%)
 Frame = -3

Query: 1704 PEKYPPPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPT 1525
            P+   P  EL+ +  +P  A      +  ++G    N +Q++V+     T +N+L+ APT
Sbjct: 483  PKPLAPGEELIKISVMPDWA------QPAFKGMTQLNRVQSKVYETALFTAENILLCAPT 536

Query: 1524 GSGKT------ICAEFAVLRNHQKASESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGM 1363
            G+GKT      I  + A+ RN   +      + VY+AP++AL  E   +   +      +
Sbjct: 537  GAGKTNVAMLTILQQIALHRNPDGSFNHSNYKIVYVAPMKALVAEVVGNLQNRLHH-YDV 595

Query: 1362 RVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQG 1183
            +V EL+G+  +  + +E+ QII++TPEKWD ++R+   R Y Q V L IIDE+HL+    
Sbjct: 596  KVKELSGDQTLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNR 655

Query: 1182 GPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGATSH-GLFNFPPGVRPV 1009
            GPVLE IV+R +R IE+  ++ IR+V LS +L N +D+  ++      GLF+F    RP 
Sbjct: 656  GPVLESIVARTVRQIETTKEH-IRLVGLSATLPNYEDVALFLRVDREKGLFHFDNSYRPC 714

Query: 1008 PLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYS 829
            PL     G+ +     R Q M    +  ++  A   +  L+FV SRK    TA  +   +
Sbjct: 715  PLAQQYIGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD-T 772

Query: 828  SMDTDEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLF 658
            ++  D    FL     S   +    + ++   L+  L +G    H G+ + D+++V  LF
Sbjct: 773  ALANDTLGRFLKEDSASREILHSHTELVKSNDLKDLLPYGFAIHHAGMARVDRQLVEDLF 832

Query: 657  EAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLL 478
              G ++V V  +++ WGV L AH V++ GTQ Y+ ++   T+    D++QM+G A RP  
Sbjct: 833  ADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGVWTELSPLDVMQMLGRAGRPQY 892

Query: 477  DNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLT 298
            D+ G+ +IL      +YY   + +  P+ES     L D  NAEIV G ++N +++  ++ 
Sbjct: 893  DSYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVLGTVQNAKEACYWIG 952

Query: 297  WTFMYRRLTQNPNYYNL 247
            +T++Y R+ +NP  Y L
Sbjct: 953  YTYLYVRMVRNPTLYGL 969


>ref|XP_010061242.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase-like
            [Eucalyptus grandis] gi|629102690|gb|KCW68159.1|
            hypothetical protein EUGRSUZ_F01825 [Eucalyptus grandis]
          Length = 2173

 Score = 1175 bits (3040), Expect = 0.0
 Identities = 573/660 (86%), Positives = 615/660 (93%), Gaps = 1/660 (0%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDH LNFTVPIYE
Sbjct: 1229 ELTITPDFQWEDKVHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYE 1288

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSD+WLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1289 PLPPQYFIRVVSDRWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1348

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            Y+ FK+FNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRNHQK  +S +MR VY
Sbjct: 1349 YKDFKNFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-IMRVVY 1407

Query: 1437 IAPVEALAKERFRDWGRKFGK-GLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSR 1261
            IAP+EALAKERFRDW RKFG+ GLGM+VVEL+GETA DLKLLEKGQIIISTPEKWDALSR
Sbjct: 1408 IAPMEALAKERFRDWNRKFGREGLGMKVVELSGETATDLKLLEKGQIIISTPEKWDALSR 1467

Query: 1260 RWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANA 1081
            RWKQRK VQQVSLFIIDELHLIGGQGGPVLEV+VSRMRYI S+V+NKIRIVALSTSLANA
Sbjct: 1468 RWKQRKQVQQVSLFIIDELHLIGGQGGPVLEVVVSRMRYIASEVENKIRIVALSTSLANA 1527

Query: 1080 KDLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNG 901
            KDLGEWIGATSHGLFNFPP VRP PLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA NG
Sbjct: 1528 KDLGEWIGATSHGLFNFPPNVRPAPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNG 1587

Query: 900  KPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRH 721
            KPALVFVP+RK+VRLTAVDLMTYS  D  E PAFLL S  +VE FIDN+ EE LR TLRH
Sbjct: 1588 KPALVFVPTRKHVRLTAVDLMTYSGADGGENPAFLLSSFEDVETFIDNVSEETLRTTLRH 1647

Query: 720  GVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENA 541
            GVGYLHEGL+  DQ+VV+ LFEAG+I+VCVM+SSMCWGVPL+A+LVVVMGTQYYDG+ENA
Sbjct: 1648 GVGYLHEGLSSLDQQVVTQLFEAGRIQVCVMSSSMCWGVPLSAYLVVVMGTQYYDGRENA 1707

Query: 540  HTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDN 361
            HTDYPVTDLLQMMG ASRPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESH+ HFLHDN
Sbjct: 1708 HTDYPVTDLLQMMGRASRPLIDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLQHFLHDN 1767

Query: 360  FNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSD 181
             NAEIVAG+IENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSD
Sbjct: 1768 LNAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSD 1827

Query: 180  LEASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            LEASKC+L+EDDMDLSP N GMIA         IERFS+SLT KTKMKGLLE+L+SASEY
Sbjct: 1828 LEASKCVLVEDDMDLSPLNLGMIASYYYISYTTIERFSTSLTSKTKMKGLLEILSSASEY 1887



 Score =  259 bits (661), Expect = 8e-66
 Identities = 168/521 (32%), Positives = 281/521 (53%), Gaps = 22/521 (4%)
 Frame = -3

Query: 1743 QTILPV-SFRHL----------ILPEKYPPPTELLDLQPLPVTALRNPSYEALYQGFKHF 1597
            +T LPV SF+HL          +L  K  P  +L+ +  LP  A      +  ++G +  
Sbjct: 456  RTDLPVGSFKHLSKGYEEVHVPVLKTKPDPNEKLVKISSLPDWA------QPAFKGMQQL 509

Query: 1596 NPIQTQVFTVLYNTDDNVLVAAPTGSGKTICA------EFAVLRNHQKASESGVMRAVYI 1435
            N +Q++V+     + +N+L+ APTG+GKT  A      + A+ R+   +      + VY+
Sbjct: 510  NRVQSKVYETALFSAENILLCAPTGAGKTNVAVLTMLQQIALNRDADGSFNHSNYKIVYV 569

Query: 1434 APVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRW 1255
            AP++AL  E   +   +  +   ++V EL+G+ ++  + +E+ QII++TPEKWD ++R+ 
Sbjct: 570  APMKALVAEIVGNLSNRLQE-YDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKS 628

Query: 1254 KQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAK 1078
              R Y Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS +L N +
Sbjct: 629  GDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLSATLPNYE 687

Query: 1077 DLGEWIGA-TSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNG 901
            D+  ++    + GLF F    RPVPL     G+ +     R Q M    +  +V  A   
Sbjct: 688  DVALFLHVDVNKGLFYFDNSYRPVPLSQQYIGITVRKPLQRFQLMNDVCYEKVVAAAGKH 747

Query: 900  KPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVE---VEPFIDNIQEEMLRAT 730
            +  L+FV SRK    TA  +   S++  D    FL    V    ++   D ++   L+  
Sbjct: 748  Q-VLIFVHSRKETAKTARAIRD-SALANDTLGRFLKEDGVSREILQSHTDIVKSNDLKDL 805

Query: 729  LRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQ 550
            L +G    H G+ ++D+++V  LF  G ++V V  +++ WGV L AH V++ GTQ Y+ +
Sbjct: 806  LPYGFAIHHAGMARADRQLVEDLFADGHVQVLVSTATLAWGVNLPAHTVIIKGTQIYNPE 865

Query: 549  ENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFL 370
            + A T+    D++QM+G A RP  D  G+ +I+      +YY   + +  P+ES     L
Sbjct: 866  KGAWTELSPLDVMQMLGRAGRPQYDTCGEGIIITGHSELQYYLSLMNQQLPIESQFVSKL 925

Query: 369  HDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
             D  NAEIV G ++N +++ +++ +T++Y R+ +NP  Y L
Sbjct: 926  ADQLNAEIVLGTVQNAREACNWIGYTYLYIRMLRNPTLYGL 966


>ref|XP_004147618.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase
            [Cucumis sativus] gi|700202051|gb|KGN57184.1|
            hypothetical protein Csa_3G168950 [Cucumis sativus]
          Length = 2175

 Score = 1172 bits (3033), Expect = 0.0
 Identities = 569/659 (86%), Positives = 617/659 (93%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDFQW+DKVHGYVE FWV+VEDNDGE+I HHE+FLLKKQY++EDH LNFTVPI E
Sbjct: 1230 ELTITPDFQWEDKVHGYVESFWVLVEDNDGEFIHHHEHFLLKKQYIDEDHTLNFTVPICE 1289

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSD+WLGSQTILPVSFRHLILPEK+PPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1290 PLPPQYFIRVVSDRWLGSQTILPVSFRHLILPEKFPPPTELLDLQPLPVTALRNPSYEAL 1349

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYNTDDNVLVAAPTGSGKTICAEFA+LRN+QK  ++ V+RAVY
Sbjct: 1350 YQDFKHFNPVQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAILRNYQKGQDN-VLRAVY 1408

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+E+LAKER+RDW +KFGKGLG+RVVELTGETA DLKLLE+GQIIISTPEKWDALSRR
Sbjct: 1409 IAPIESLAKERYRDWDKKFGKGLGIRVVELTGETATDLKLLERGQIIISTPEKWDALSRR 1468

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ++NKIRIVALSTSLANAK
Sbjct: 1469 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQIENKIRIVALSTSLANAK 1528

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            D+G+WIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA NGK
Sbjct: 1529 DIGDWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNGK 1588

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVD+MTYSS D  EK  FLL S  ++EPF+D I +EML+A LRHG
Sbjct: 1589 PAIVFVPTRKHVRLTAVDIMTYSSADNGEKLPFLLRSLEDIEPFVDKINDEMLKAILRHG 1648

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL+  DQEVV+ LFEAG I+VCV++SSMCWGVPL+AHLVVVMGTQYYDG+ENAH
Sbjct: 1649 VGYLHEGLSSLDQEVVTQLFEAGWIQVCVISSSMCWGVPLSAHLVVVMGTQYYDGRENAH 1708

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDL+QMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDN 
Sbjct: 1709 TDYPVTDLMQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNI 1768

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAG+IENKQD+VDY+TWT MYRRLTQNPNYYNLQGVSHRHLSDHLSELVE+TLSDL
Sbjct: 1769 NAEIVAGIIENKQDAVDYITWTLMYRRLTQNPNYYNLQGVSHRHLSDHLSELVEHTLSDL 1828

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSPSN GMIA         IERFSSSLT KTKMKGLLE+LASASEY
Sbjct: 1829 EASKCISIEDDMDLSPSNLGMIASYYYISYTTIERFSSSLTAKTKMKGLLEILASASEY 1887



 Score =  249 bits (637), Expect = 5e-63
 Identities = 154/468 (32%), Positives = 253/468 (54%), Gaps = 11/468 (2%)
 Frame = -3

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLR------NHQKASESG 1456
            ++G    N +Q++V+       DNVL+ APTG+GKT  A   +L+      N   +    
Sbjct: 504  FKGMTQLNRVQSKVYETALFKADNVLLCAPTGAGKTNVAVLTILQQIALHTNPDGSYNHN 563

Query: 1455 VMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKW 1276
              + VY+AP++AL  E   +   +  +  G++V EL+G+  +  + +++ QII++TPEKW
Sbjct: 564  DYKIVYVAPMKALVAEVVGNLSNRL-QDYGVKVRELSGDQTLTRQQIDETQIIVTTPEKW 622

Query: 1275 DALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALS 1099
            D ++R+   R Y Q V L IIDE+HL+    GPVLE IV+R +R IE+  ++ IR+V LS
Sbjct: 623  DIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKEH-IRLVGLS 681

Query: 1098 TSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAI 922
             +L N +D+  ++      GLF+F    RPV L     G+ +     R Q M    +  +
Sbjct: 682  ATLPNYEDVALFLRVDPKKGLFHFDNSYRPVALYQQYIGITVKKPLQRFQLMNDLCYEKV 741

Query: 921  VQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLL---CSPVEVEPFIDNIQ 751
            +  A   +  L+FV SRK    TA  +   +++  D    FL     S   +    D ++
Sbjct: 742  MSFAGKHQ-VLIFVHSRKETSKTARAIRD-AALANDTLSRFLKEDSASREILHTHTDLVK 799

Query: 750  EEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMG 571
               L+  L +G    H G+ + D+++V  LF  G I+V V  +++ WGV L AH V++ G
Sbjct: 800  SNELKDLLPYGFAIHHAGMTRVDRQLVEDLFADGHIQVLVSTATLAWGVNLPAHCVIIKG 859

Query: 570  TQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVE 391
            TQ Y+ ++ A T+    D++QM+G A RP  D+ G  +I+      +YY   + +  P+E
Sbjct: 860  TQIYNPEKGAWTELSPLDVMQMLGRAGRPQFDSEGTGIIITGHSELQYYLSLMNQQLPIE 919

Query: 390  SHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            S     L D  NAEIV G ++N +++ ++L +T++Y R+ +NP  Y L
Sbjct: 920  SQFVSKLADQLNAEIVLGTVQNAREASNWLGYTYLYVRMLRNPTLYGL 967


>ref|XP_014500879.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Vigna
            radiata var. radiata]
          Length = 2184

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 571/659 (86%), Positives = 612/659 (92%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDF WDD++HGYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDH LNFTVPIYE
Sbjct: 1237 ELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYE 1296

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFI VVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1297 PLPPQYFIHVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1356

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGKTICAEFAVLRNHQK  +S VMR VY
Sbjct: 1357 YQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAVLRNHQKGPDS-VMRVVY 1415

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            +AP+EALAKER+RDW RKFG GL +RVVELTGETA DLKLLEKGQIIISTPEKWDALSRR
Sbjct: 1416 VAPIEALAKERYRDWERKFGIGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALSRR 1475

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGGQGGPVLEV+VSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1476 WKQRKHVQQVSLFIIDELHLIGGQGGPVLEVVVSRMRYIASQVENKIRIVALSTSLANAK 1535

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA N K
Sbjct: 1536 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNKK 1595

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PALVFVP+RK+VRLTAVDL+TYS  D+ EKP FLL SP E+EPF+D I +EML+ TLR G
Sbjct: 1596 PALVFVPTRKHVRLTAVDLITYSGADSGEKP-FLLRSPEELEPFLDKISDEMLKVTLREG 1654

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  D ++V+ LF+AG I+VCV+NSSMCWGV L+AHLVVVMGTQYYDG+ENA 
Sbjct: 1655 VGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDGRENAQ 1714

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDN 
Sbjct: 1715 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1774

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAG+IENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTLSDL
Sbjct: 1775 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1834

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKCI IEDDMDLSP N GMIA         IERFSSS+T KTKMKGLLE+L+SASEY
Sbjct: 1835 EASKCITIEDDMDLSPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEY 1893



 Score =  251 bits (641), Expect = 2e-63
 Identities = 158/493 (32%), Positives = 267/493 (54%), Gaps = 12/493 (2%)
 Frame = -3

Query: 1689 PPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 1510
            P  +L+ +  +P  A      +  ++G    N +Q++V+       DN+L+ APTG+GKT
Sbjct: 492  PNEKLVKISSMPDWA------QPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKT 545

Query: 1509 ICAEFAVL------RNHQKAS-ESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVE 1351
              A   +L      RN +  S +    + VY+AP++AL  E   +   +  +   ++V E
Sbjct: 546  NVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRE 604

Query: 1350 LTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVL 1171
            L+G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V L IIDE+HL+    GPVL
Sbjct: 605  LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVL 664

Query: 1170 EVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEI 997
            E IV+R +R IE+  D  IR+V LS +L N +D+  ++      GLF F    RPVPL  
Sbjct: 665  ESIVARTVRQIETTKDY-IRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQ 723

Query: 996  HIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDT 817
               G+ +     R Q M    +  ++  A   +  L+FV SRK    TA  +   +++  
Sbjct: 724  QYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD-AALGK 781

Query: 816  DEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGK 646
            D    FL     S   ++   D ++   L+  L +G    H G+ ++D+++V  LF  G 
Sbjct: 782  DTLGRFLKEDSASREILQTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGH 841

Query: 645  IKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSG 466
            ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  D+ G
Sbjct: 842  VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 901

Query: 465  KCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFM 286
            + +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++ +++ +T++
Sbjct: 902  EGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYL 961

Query: 285  YRRLTQNPNYYNL 247
            Y R+ +NP+ Y +
Sbjct: 962  YVRMLRNPSLYGI 974


>gb|KOM42591.1| hypothetical protein LR48_Vigan05g019500 [Vigna angularis]
          Length = 2184

 Score = 1172 bits (3031), Expect = 0.0
 Identities = 570/659 (86%), Positives = 612/659 (92%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDF WDD++HGYVEPFWVIVEDNDGEYILHHEYF+LKKQY++EDH LNFTVPIYE
Sbjct: 1237 ELTITPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEYFMLKKQYIDEDHTLNFTVPIYE 1296

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFI VVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1297 PLPPQYFIHVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1356

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGKTICAEFAVLRNHQK  +S VMR VY
Sbjct: 1357 YQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAVLRNHQKGPDS-VMRVVY 1415

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            +AP+EALAKER+RDW RKFG GL +RVVELTGETA DLKLLEKGQIIISTPEKWDALSRR
Sbjct: 1416 VAPIEALAKERYRDWERKFGNGLKLRVVELTGETATDLKLLEKGQIIISTPEKWDALSRR 1475

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGGQGGPVLEV+VSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1476 WKQRKHVQQVSLFIIDELHLIGGQGGPVLEVVVSRMRYIASQVENKIRIVALSTSLANAK 1535

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAIVQHA N K
Sbjct: 1536 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIVQHAKNKK 1595

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PALVFVP+RK+VRLTAVDL+TYS  D+ EKP FLL SP E+EPF+D I +EML+ TLR G
Sbjct: 1596 PALVFVPTRKHVRLTAVDLITYSGADSGEKP-FLLRSPEELEPFLDKISDEMLKVTLREG 1654

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  D ++V+ LF+AG I+VCV+NSSMCWGV L+AHLVVVMGTQYYDG+ENA 
Sbjct: 1655 VGYLHEGLNSLDHDIVTQLFDAGWIQVCVLNSSMCWGVTLSAHLVVVMGTQYYDGRENAQ 1714

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDN 
Sbjct: 1715 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1774

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAG+IENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTLSDL
Sbjct: 1775 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1834

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IEDDMDLSP N GMIA         IERFSSS+T KTKMKGLLE+L+SASEY
Sbjct: 1835 EASKCMTIEDDMDLSPLNLGMIASYYYISYTTIERFSSSVTSKTKMKGLLEILSSASEY 1893



 Score =  251 bits (640), Expect = 2e-63
 Identities = 158/493 (32%), Positives = 267/493 (54%), Gaps = 12/493 (2%)
 Frame = -3

Query: 1689 PPTELLDLQPLPVTALRNPSYEALYQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKT 1510
            P  +L+ +  +P  A      +  ++G    N +Q++V+       DN+L+ APTG+GKT
Sbjct: 492  PNEKLVKISSMPDWA------QPAFKGMTQLNRVQSKVYETALFKPDNLLLCAPTGAGKT 545

Query: 1509 ICAEFAVL------RNHQKAS-ESGVMRAVYIAPVEALAKERFRDWGRKFGKGLGMRVVE 1351
              A   +L      RN +  S +    + VY+AP++AL  E   +   +  +   ++V E
Sbjct: 546  NVAVLTILQQIARHRNPEDGSIDHSAYKIVYVAPMKALVAEVVGNLSNRLQE-YDVKVRE 604

Query: 1350 LTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVSLFIIDELHLIGGQGGPVL 1171
            L+G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V L IIDE+HL+    GPVL
Sbjct: 605  LSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVKLVIIDEIHLLHDNRGPVL 664

Query: 1170 EVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT-SHGLFNFPPGVRPVPLEI 997
            E IV+R +R IE+  D  IR+V LS +L N +D+  ++      GLF F    RPVPL  
Sbjct: 665  ESIVARTVRQIETTKDY-IRLVGLSATLPNYEDVALFLRVDLKKGLFYFDNSYRPVPLSQ 723

Query: 996  HIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSRKYVRLTAVDLMTYSSMDT 817
               G+ +     R Q M    +  ++  A   +  L+FV SRK    TA  +   +++  
Sbjct: 724  QYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSRKETAKTARAIRD-AALGK 781

Query: 816  DEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHEGLNKSDQEVVSTLFEAGK 646
            D    FL     S   ++   D ++   L+  L +G    H G+ ++D+++V  LF  G 
Sbjct: 782  DTLGRFLKEDSASREILQTHTDLVKSNDLKDLLPYGFAIHHAGMTRTDRQLVEDLFADGH 841

Query: 645  IKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVTDLLQMMGHASRPLLDNSG 466
            ++V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    D++QM+G A RP  D+ G
Sbjct: 842  VQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPLDVMQMLGRAGRPQYDSYG 901

Query: 465  KCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVAGVIENKQDSVDYLTWTFM 286
            + +I+      +YY   + +  P+ES     L D  NAEIV G ++N +++ +++ +T++
Sbjct: 902  EGIIVTGHSELQYYLSLMNQQLPIESQFVSKLADQLNAEIVLGTVQNAREACNWIGYTYL 961

Query: 285  YRRLTQNPNYYNL 247
            Y R+ +NP+ Y +
Sbjct: 962  YVRMLRNPSLYGI 974


>ref|XP_003595992.2| U5 small nuclear ribonucleoprotein 200 kDa helicase [Medicago
            truncatula] gi|657398835|gb|AES66243.2| U5 small nuclear
            ribonucleoprotein 200 kDa helicase [Medicago truncatula]
          Length = 2188

 Score = 1164 bits (3010), Expect = 0.0
 Identities = 569/659 (86%), Positives = 611/659 (92%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELTITPDF WDD++HGYVEPFWVIVEDNDGEYILHHEYFLLKKQY+EEDH LNFTVPIYE
Sbjct: 1245 ELTITPDFAWDDRMHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYE 1304

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1305 PLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1364

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGKTICAEFA+LRNHQK  +S VMR VY
Sbjct: 1365 YQDFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKLPDS-VMRVVY 1423

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAPVEALAKER+RDW +KFG GL ++VVELTGETA DLKLLEKGQ+IISTPEKWDALSRR
Sbjct: 1424 IAPVEALAKERYRDWEKKFGGGLKLKVVELTGETATDLKLLEKGQVIISTPEKWDALSRR 1483

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQ++NKIRIVALSTSLANAK
Sbjct: 1484 WKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYISSQLENKIRIVALSTSLANAK 1543

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+T+I QHA N K
Sbjct: 1544 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTSIAQHAKNKK 1603

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PA+VFVP+RK+VRLTAVDL+TYS  D+ EKP FLL S  E+EPFI+ I +EML+ TLR G
Sbjct: 1604 PAIVFVPTRKHVRLTAVDLITYSGADSGEKP-FLLRSLEELEPFINKISDEMLKVTLREG 1662

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGLN  D ++V+ LFEAG I+VCV++SSMCWGV L+AHLVVVMGTQYYDG+ENA 
Sbjct: 1663 VGYLHEGLNSLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQ 1722

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDN 
Sbjct: 1723 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1782

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAG+IENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTLSDL
Sbjct: 1783 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1842

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLEVL+SASEY
Sbjct: 1843 EASKCVSIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEY 1901



 Score =  252 bits (643), Expect = 1e-63
 Identities = 167/511 (32%), Positives = 273/511 (53%), Gaps = 18/511 (3%)
 Frame = -3

Query: 1725 SFRHLI--LPEKYPPPTELLDLQP----LPVTALRNPSYEALYQGFKHFNPIQTQVFTVL 1564
            S+RHL     E + P  +   L P    L ++A+ + +  A ++G    N +Q++V+   
Sbjct: 477  SYRHLEKGYEEIHVPALKAKPLDPNEKLLKISAMPDWAQPA-FKGMTQLNRVQSKVYETA 535

Query: 1563 YNTDDNVLVAAPTGSGKTICAEFAVLRN---HQKASESGV----MRAVYIAPVEALAKER 1405
                DN+L+ APTG+GKT  A   +L+    H+   +  +     + VY+AP++AL  E 
Sbjct: 536  LFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNTDDGSIDHSAYKIVYVAPMKALVAEV 595

Query: 1404 FRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVS 1225
              +   +  +   + V EL+G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V 
Sbjct: 596  VGNLSNRL-QDYNVTVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK 654

Query: 1224 LFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT- 1051
            L IIDE+HL+    GPVLE IV+R +R IE+  D  IR+V LS +L N +D+  ++    
Sbjct: 655  LVIIDEIHLLHDNRGPVLESIVARTVRQIETSKDY-IRLVGLSATLPNYEDVALFLRVDL 713

Query: 1050 SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSR 871
            + GLF F    RPVPL     G+ I     R Q M    +  ++  A   +  L+FV SR
Sbjct: 714  NKGLFYFDNSYRPVPLSQQYIGITIKKPLQRFQLMNDICYRKVLDVAGKHQ-VLIFVHSR 772

Query: 870  KYVRLTAVDLMTYSSMDTDEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHE 700
            K    TA  +   +  D D    FL     S   +    D ++   L+  L +G    H 
Sbjct: 773  KETAKTARAIRDAALAD-DTLGRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHA 831

Query: 699  GLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVT 520
            G+ ++D+++V  LF  G  +V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    
Sbjct: 832  GMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPL 891

Query: 519  DLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVA 340
            D++QM+G A RP  D+ G+ +IL      +YY   + +  P+ES     L D  NAEIV 
Sbjct: 892  DVMQMLGRAGRPQYDSYGEGIILTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVL 951

Query: 339  GVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            G ++N +++  ++ +T++Y R+ +NP+ Y L
Sbjct: 952  GTVQNAKEACHWIGYTYLYVRMLRNPSLYGL 982


>ref|XP_004488845.1| PREDICTED: U5 small nuclear ribonucleoprotein 200 kDa helicase [Cicer
            arietinum] gi|502089221|ref|XP_004488846.1| PREDICTED: U5
            small nuclear ribonucleoprotein 200 kDa helicase [Cicer
            arietinum]
          Length = 2187

 Score = 1162 bits (3007), Expect = 0.0
 Identities = 567/659 (86%), Positives = 610/659 (92%)
 Frame = -3

Query: 1977 ELTITPDFQWDDKVHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYVEEDHFLNFTVPIYE 1798
            ELT+TPDF WDD++HGYVEPFWVIVEDNDGEYILHHEYFLLKKQY+EEDH LNFTVPIYE
Sbjct: 1241 ELTVTPDFAWDDRIHGYVEPFWVIVEDNDGEYILHHEYFLLKKQYIEEDHTLNFTVPIYE 1300

Query: 1797 PLPPQYFIRVVSDKWLGSQTILPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1618
            PLPPQYFIRVVSDKWLGSQT+LPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL
Sbjct: 1301 PLPPQYFIRVVSDKWLGSQTVLPVSFRHLILPEKYPPPTELLDLQPLPVTALRNPSYEAL 1360

Query: 1617 YQGFKHFNPIQTQVFTVLYNTDDNVLVAAPTGSGKTICAEFAVLRNHQKASESGVMRAVY 1438
            YQ FKHFNP+QTQVFTVLYN+DDNVLVAAPTGSGKTICAEFA+LRNHQK  +S VMR VY
Sbjct: 1361 YQEFKHFNPVQTQVFTVLYNSDDNVLVAAPTGSGKTICAEFAILRNHQKGPDS-VMRVVY 1419

Query: 1437 IAPVEALAKERFRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRR 1258
            IAP+EALAKER+RDW +KFG GL +RVVELTGETA D+KLLEKGQIIISTPEKWDALSRR
Sbjct: 1420 IAPIEALAKERYRDWKKKFGGGLELRVVELTGETATDVKLLEKGQIIISTPEKWDALSRR 1479

Query: 1257 WKQRKYVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIESQVDNKIRIVALSTSLANAK 1078
            WKQRK+VQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYI SQV+NKIRIVALSTSLANAK
Sbjct: 1480 WKQRKHVQQVSLFIIDELHLIGGQGGPVLEVIVSRMRYIASQVENKIRIVALSTSLANAK 1539

Query: 1077 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGK 898
            DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDI NFEARMQAMTKPT+TAI QHA N K
Sbjct: 1540 DLGEWIGATSHGLFNFPPGVRPVPLEIHIQGVDIANFEARMQAMTKPTYTAIAQHAKNRK 1599

Query: 897  PALVFVPSRKYVRLTAVDLMTYSSMDTDEKPAFLLCSPVEVEPFIDNIQEEMLRATLRHG 718
            PALVFVP+RK+VRLTAVD++TYS  D+ EKP FLL    E+EPFI+ + +EML+ TLR G
Sbjct: 1600 PALVFVPTRKHVRLTAVDMITYSGADSSEKP-FLLRPIEELEPFINKVSDEMLKVTLREG 1658

Query: 717  VGYLHEGLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAH 538
            VGYLHEGL+  D ++V+ LFEAG I+VCV++SSMCWGV L+AHLVVVMGTQYYDG+ENA 
Sbjct: 1659 VGYLHEGLDNLDHDIVAQLFEAGWIQVCVLSSSMCWGVTLSAHLVVVMGTQYYDGRENAQ 1718

Query: 537  TDYPVTDLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNF 358
            TDYPVTDLLQMMGHASRPL+DNSGKCVILCHAPRKEYYKKFLYEAFPVESH+HHFLHDN 
Sbjct: 1719 TDYPVTDLLQMMGHASRPLVDNSGKCVILCHAPRKEYYKKFLYEAFPVESHLHHFLHDNL 1778

Query: 357  NAEIVAGVIENKQDSVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSELVENTLSDL 178
            NAEIVAG+IENKQD+VDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSE+VENTLSDL
Sbjct: 1779 NAEIVAGIIENKQDAVDYLTWTFMYRRLTQNPNYYNLQGVSHRHLSDHLSEMVENTLSDL 1838

Query: 177  EASKCILIEDDMDLSPSNHGMIAXXXXXXXXXIERFSSSLTPKTKMKGLLEVLASASEY 1
            EASKC+ IEDDMDLSP N GMIA         IERFSSSLT KTKMKGLLEVL+SASEY
Sbjct: 1839 EASKCVAIEDDMDLSPLNLGMIASYYYISYTTIERFSSSLTSKTKMKGLLEVLSSASEY 1897



 Score =  251 bits (641), Expect = 2e-63
 Identities = 163/511 (31%), Positives = 276/511 (54%), Gaps = 18/511 (3%)
 Frame = -3

Query: 1725 SFRHLI--LPEKYPPPTELLDLQP----LPVTALRNPSYEALYQGFKHFNPIQTQVFTVL 1564
            S+RHL     E + P  +   L P    + ++A+ + +  A ++G    N +Q++V+   
Sbjct: 473  SYRHLSKGYEEIHVPALKAKPLDPNEKLVKISAMPDWAQPA-FKGMTQLNRVQSKVYETA 531

Query: 1563 YNTDDNVLVAAPTGSGKTICAEFAVLRN---HQKASESGV----MRAVYIAPVEALAKER 1405
                DN+L+ APTG+GKT  A   +L+    H+  ++  +     + VY+AP++AL  E 
Sbjct: 532  LFKPDNLLLCAPTGAGKTNVAVLTILQQIARHRNPNDGSIDHTAYKIVYVAPMKALVAEV 591

Query: 1404 FRDWGRKFGKGLGMRVVELTGETAMDLKLLEKGQIIISTPEKWDALSRRWKQRKYVQQVS 1225
              +   +  K   ++V EL+G+ ++  + +E+ QII++TPEKWD ++R+   R Y Q V 
Sbjct: 592  VGNLSNRLEK-YDVKVRELSGDQSLTRQQIEETQIIVTTPEKWDIITRKSGDRTYTQLVK 650

Query: 1224 LFIIDELHLIGGQGGPVLEVIVSR-MRYIESQVDNKIRIVALSTSLANAKDLGEWIGAT- 1051
            L IIDE+HL+    GPVLE IV+R +R IE+  D  IR+V LS +L N +D+  ++    
Sbjct: 651  LLIIDEIHLLHDNRGPVLESIVARTVRQIETTKDY-IRLVGLSATLPNYEDVALFLRVDL 709

Query: 1050 SHGLFNFPPGVRPVPLEIHIQGVDITNFEARMQAMTKPTHTAIVQHANNGKPALVFVPSR 871
            + GLF F    RPVPL     G+ +     R Q M    +  ++  A   +  L+FV SR
Sbjct: 710  NKGLFYFDNSYRPVPLSQQYVGITVKKPLQRFQLMNDICYEKVMAVAGKHQ-VLIFVHSR 768

Query: 870  KYVRLTAVDLMTYSSMDTDEKPAFLL---CSPVEVEPFIDNIQEEMLRATLRHGVGYLHE 700
            K    TA  +   +++  D    FL     S   +    D ++   L+  L +G    H 
Sbjct: 769  KETAKTARAIRD-AALANDTLSRFLKEDSASREILHTHTDLVKSSDLKDLLPYGFAIHHA 827

Query: 699  GLNKSDQEVVSTLFEAGKIKVCVMNSSMCWGVPLTAHLVVVMGTQYYDGQENAHTDYPVT 520
            G+ ++D+++V  LF  G  +V V  +++ WGV L AH V++ GTQ Y+ ++ A T+    
Sbjct: 828  GMTRTDRQLVEDLFADGHAQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGAWTELSPL 887

Query: 519  DLLQMMGHASRPLLDNSGKCVILCHAPRKEYYKKFLYEAFPVESHMHHFLHDNFNAEIVA 340
            D++QM+G A RP  D+ G+ +I+      +YY   + +  P+ES     L D  NAEIV 
Sbjct: 888  DVMQMLGRAGRPQYDSYGEGIIVTGHSELQYYLSLMNQQLPIESQFISKLADQLNAEIVL 947

Query: 339  GVIENKQDSVDYLTWTFMYRRLTQNPNYYNL 247
            G ++N +++  ++ +T++Y R+ +NP+ Y +
Sbjct: 948  GTVQNAKEACHWIGYTYLYVRMLRNPSLYGI 978