BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00005888
         (5337 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006470381.1| PREDICTED: DNA repair protein UVH3-like isof...  2434   0.0  
ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citr...  2415   0.0  
ref|XP_006470382.1| PREDICTED: DNA repair protein UVH3-like isof...  2129   0.0  
ref|XP_006470383.1| PREDICTED: DNA repair protein UVH3-like isof...  1999   0.0  
ref|XP_006446453.1| hypothetical protein CICLE_v10014025mg [Citr...  1761   0.0  
ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 ...  1604   0.0  
ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X...  1526   0.0  
gb|KJB11470.1| hypothetical protein B456_001G260400 [Gossypium r...  1514   0.0  
gb|KJB11469.1| hypothetical protein B456_001G260400 [Gossypium r...  1512   0.0  
ref|XP_012081974.1| PREDICTED: DNA repair protein UVH3 [Jatropha...  1507   0.0  
gb|KHG04183.1| DNA repair UVH3 -like protein [Gossypium arboreum]    1498   0.0  
ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X...  1494   0.0  
ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X...  1475   0.0  
ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X...  1466   0.0  
gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium r...  1459   0.0  
gb|KJB11466.1| hypothetical protein B456_001G260400 [Gossypium r...  1455   0.0  
gb|KJB11467.1| hypothetical protein B456_001G260400 [Gossypium r...  1450   0.0  
gb|KJB11465.1| hypothetical protein B456_001G260400 [Gossypium r...  1450   0.0  
ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus c...  1439   0.0  
gb|KJB11468.1| hypothetical protein B456_001G260400 [Gossypium r...  1430   0.0  

>ref|XP_006470381.1| PREDICTED: DNA repair protein UVH3-like isoform X1 [Citrus sinensis]
          Length = 1699

 Score = 2434 bits (6307), Expect = 0.0
 Identities = 1285/1696 (75%), Positives = 1401/1696 (82%), Gaps = 12/1696 (0%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLWDLLAPVGRRVSVETLSGKKLAIDASIWM+QFMKAMRDEKGEMVRNAHLIGFFR
Sbjct: 1    MGVHGLWDLLAPVGRRVSVETLSGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHLIGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKENLDEMLASSIAAEANES 4680
            ELA DLENQRQTQK + KGKK+LSD+EN SER+D VSA+D+KENLDEMLA+SIAAEANES
Sbjct: 121  ELALDLENQRQTQKRDPKGKKVLSDMENSSERTDGVSASDDKENLDEMLAASIAAEANES 180

Query: 4679 LSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKK 4500
             SKSASKSAT +             LPT+ GNVDPAV A+LPPSMQHQLLVR NDAKGK 
Sbjct: 181  SSKSASKSATANLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQLLVRNNDAKGKN 240

Query: 4499 ILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXX 4320
            +LSDD  Q+D  GIS E +DVVSK+ DH+KLDEMLAASIAAEED SL+NN S        
Sbjct: 241  VLSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIAAEEDGSLSNNASASAASLPL 300

Query: 4319 XXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPE 4140
                     EMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPE
Sbjct: 301  EEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPE 360

Query: 4139 KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 3960
            KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV
Sbjct: 361  KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 420

Query: 3959 LTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDD 3780
            LTSSRV+ K+D+QQQ PSEH   DS NN AS D S  +S D+SN+VT+L PEESRK F D
Sbjct: 421  LTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTKLGPEESRKSFAD 480

Query: 3779 DVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKT 3600
            DVETYLDERGRVR+SKVRAMGIRMTRDLQRNL+MMKE E ERPN N IT A SML LN+T
Sbjct: 481  DVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNITGAGSMLTLNET 540

Query: 3599 GTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVI 3420
            GTSK   S K  F+ TS +D +ESVS IERNK +   +G S+E+SF+DN E + DDDD I
Sbjct: 541  GTSKAVPSEKRKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENNCDDDDDI 600

Query: 3419 FAHLVAGNPFIFPADNSPRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDG 3240
            FAHL AG P IFP  NSPR  S  S+SDSDWEEGTTERKGNSL DDANAGI PPLNLE+G
Sbjct: 601  FAHLAAGKPVIFP--NSPRAHSSISVSDSDWEEGTTERKGNSLSDDANAGINPPLNLEEG 658

Query: 3239 NISDESEVEWEEGPSAAPKSSLLFPTESVKIVCNMEEEANLQEAIRRSLLDVCGEKQNYV 3060
             ISDESEVEWEEGPS APKSSL FP ES K V NMEEEANLQEAIRRSLLDVC EK NY 
Sbjct: 659  GISDESEVEWEEGPSCAPKSSLSFPAESEKTVSNMEEEANLQEAIRRSLLDVCIEKPNYA 718

Query: 3059 SSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGV 2880
             SEH K +NLGE A DGTW +D+ENN DD N LG++  ++NE  CE+VDGL KL T GG+
Sbjct: 719  LSEHSKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQNESICEYVDGLGKLDTVGGI 778

Query: 2879 NNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH-----ASDGGALCRD 2715
            NNSE+I SL  +LKLS   N D KE+LINK  E    SY EQSR      A+DG +LC D
Sbjct: 779  NNSEVIGSLGRELKLSEPLNSDEKEMLINKPFEKDN-SYFEQSRQGANDGANDGRSLCSD 837

Query: 2714 ALCEESSTFMDLKGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQI 2535
            A CE+S T M+L  V LVKG+CLSAS KGD H T DK CS+DRS+S D +F DSS AI  
Sbjct: 838  APCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVDAVFEDSSIAILD 897

Query: 2534 DGKKIDCEAEISDLASDKKNEIEAVMKHNFIAKPTCHTIGICDPSIPMVESSGNASIYNS 2355
            + KK +CEAE S L  DKKNEIE  MKH+F A+P+C T+G  D SIP+V+SSGNASIY++
Sbjct: 898  EDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKSSGNASIYDT 957

Query: 2354 VTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKILEE-MLILDQECRNLGDE 2178
              EQK   ERTHDT ++D K NTG  A K  ENVHAEA+EKILEE M ILD E   LGDE
Sbjct: 958  DIEQKSAEERTHDTCLEDSKQNTGILATKAIENVHAEATEKILEEEMQILDHEYMYLGDE 1017

Query: 2177 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 1998
            QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV
Sbjct: 1018 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 1077

Query: 1997 FLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVN 1818
            FLFGARSVYKNIFDDRKYVETYFMQDIEK+LGLTRE+LIRMALLLGSDYTEGISGIGIVN
Sbjct: 1078 FLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 1137

Query: 1817 AIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNVE 1638
            AIEVVNAFPEEDGL KFREWIESPDPTILGKFDVQTGASS KR   +GD DVN AKN+V 
Sbjct: 1138 AIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKNSVG 1197

Query: 1637 GVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQL 1458
            GVS FDE+ISQF+EDKQSA YSQNMKKIF DKHRNVSKNWHIPSSFPSEAVISAYFCPQ+
Sbjct: 1198 GVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHRNVSKNWHIPSSFPSEAVISAYFCPQV 1257

Query: 1457 DKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNE 1278
            DKSTE FSWGKPDLFVLRKFCWDKFGWG DKSNELLVPVLKEYEKRETQLRLEAFY+FNE
Sbjct: 1258 DKSTESFSWGKPDLFVLRKFCWDKFGWGGDKSNELLVPVLKEYEKRETQLRLEAFYTFNE 1317

Query: 1277 KFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMN 1098
            +FAKIRS RIKKAVKGITG QSL  MDDAGQEVSKS+KKR  N LE+GNNRS KA K+  
Sbjct: 1318 RFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNNGLENGNNRSQKAPKKAE 1377

Query: 1097 ESVTGAQSNMEKSTPRQSRKRKVLEKFVPSEMENPERVALADSGANKVSHGRGSRRGKVQ 918
            ESV+GAQ+NMEKS+  QSR+RKVLEKFV +EMENPER+  A  G N  +  RG+RRGK Q
Sbjct: 1378 ESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGGGRNANNVFRGNRRGKGQ 1437

Query: 917  RVGRGTP----CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDP 750
            RVGRG      CAE SETSSSD IG DD QEYY EK +G Q VRRS RSRKPV+Y+VDDP
Sbjct: 1438 RVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDP 1497

Query: 749  EVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDKDHIERGGGF 570
            E+ DVGKI++NKE SN+  A+QD VHGV G+ASAD SRKKQ RA DPSIDKD+IERGGGF
Sbjct: 1498 EIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGF 1557

Query: 569  CIDDDGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESETREDQVAEQDPVISGEIL 390
            CI DD E G+P+VSP DDP  EAE +KDY+KMGGGFC DESETREDQVA +DPV++GE  
Sbjct: 1558 CI-DDREIGRPSVSPCDDPFLEAEITKDYMKMGGGFCHDESETREDQVAAKDPVVTGESP 1616

Query: 389  STCFDSLGGVDCDIGLGDST--SGSKEDIKGSESNWRTDTIDTELNLVHQSATSTDNVKN 216
            STC DS  GV CD+GLGDST  S SKE   G E+  RTDT DTE N V Q+ATSTD+ +N
Sbjct: 1617 STCLDSSDGVHCDVGLGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSARN 1676

Query: 215  NADGSSGGALTAMPFL 168
            +A  +S G+LTAM FL
Sbjct: 1677 DAGRASRGSLTAMTFL 1692


>ref|XP_006446452.1| hypothetical protein CICLE_v10014025mg [Citrus clementina]
            gi|557549063|gb|ESR59692.1| hypothetical protein
            CICLE_v10014025mg [Citrus clementina]
          Length = 1699

 Score = 2415 bits (6260), Expect = 0.0
 Identities = 1275/1696 (75%), Positives = 1398/1696 (82%), Gaps = 12/1696 (0%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLWDLLAPVGRRVSVETLSGKKLAIDASIWM+QFMKAMRDEKGEMVRNAHLIGFFR
Sbjct: 1    MGVHGLWDLLAPVGRRVSVETLSGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHLIGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKENLDEMLASSIAAEANES 4680
            ELA DLENQRQ QK + +GKK+LSD+EN SER+D VSA+D+KENLDEMLA+SIAAEANES
Sbjct: 121  ELALDLENQRQIQKRDPEGKKVLSDMENCSERTDGVSASDDKENLDEMLAASIAAEANES 180

Query: 4679 LSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKK 4500
             SKSASKSAT +             LPT+ GNVDPAV A+LPPSMQHQLLVR NDAKGK 
Sbjct: 181  SSKSASKSATANLLEEDGDEDEEIMLPTMGGNVDPAVFAALPPSMQHQLLVRNNDAKGKN 240

Query: 4499 ILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXX 4320
            +LSDD  Q+D  GIS E +D VSK+ DH+ LDEMLAASIAAEED SL+NN S        
Sbjct: 241  VLSDDLGQADTVGISPESHDGVSKSRDHKMLDEMLAASIAAEEDGSLSNNASASAASLPL 300

Query: 4319 XXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPE 4140
                     EMILPAMTGNVDPAVLAALPPSMQLDLLVQMRE+LMAENRQKYQKVKKAPE
Sbjct: 301  EEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPE 360

Query: 4139 KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 3960
            KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV
Sbjct: 361  KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 420

Query: 3959 LTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDD 3780
            LTSSRV+ K+D+QQQ PSEH   DSVNN AS D S  +S D+SN+VT+L P ESRK F D
Sbjct: 421  LTSSRVEGKKDEQQQIPSEHPVSDSVNNGASIDKSNFSSTDQSNSVTKLGPGESRKSFAD 480

Query: 3779 DVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKT 3600
            DVETYLDERGRVR+SKVRAMGIRMTRDLQRNL MMKE E +RPN N IT A SML LN+T
Sbjct: 481  DVETYLDERGRVRLSKVRAMGIRMTRDLQRNLAMMKEIEQDRPNGNNITGAGSMLTLNET 540

Query: 3599 GTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVI 3420
            GTS    S KS F+ TS +D +ESVS IERNK +   +G S+E+SF+DN E + DDDD I
Sbjct: 541  GTSNAVPSEKSKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENNCDDDDDI 600

Query: 3419 FAHLVAGNPFIFPADNSPRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDG 3240
            FAHL AG P IFP  NSPR  S  S+SDSDWEEGTTERKG+SL DDANAGI PPLNLE+G
Sbjct: 601  FAHLAAGKPVIFP--NSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGINPPLNLEEG 658

Query: 3239 NISDESEVEWEEGPSAAPKSSLLFPTESVKIVCNMEEEANLQEAIRRSLLDVCGEKQNYV 3060
             ISDESEVEWEEGPS APKSSL FP ES K V N+EEEANLQEAIRRSLLDVC EK NY 
Sbjct: 659  GISDESEVEWEEGPSCAPKSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDVCIEKPNYA 718

Query: 3059 SSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGV 2880
             SEH K +NLGE A DGTW +D+ENN DD N LG++  +++E  CE+VDGL KL T GG+
Sbjct: 719  LSEHNKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTVGGI 778

Query: 2879 NNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH-----ASDGGALCRD 2715
            NNSE+I SL  +LKL    N D KE+LINK  E    SY EQSR      A+DG +LC D
Sbjct: 779  NNSEVIGSLGRELKLYEPRNSDEKEMLINKPFEKDN-SYFEQSRQGANDGANDGRSLCSD 837

Query: 2714 ALCEESSTFMDLKGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQI 2535
            A CE+S T M+L  V LVKG+CLSAS KGD H T DK CS+DRS+S D +F DSS AI  
Sbjct: 838  APCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVDAVFEDSSIAILD 897

Query: 2534 DGKKIDCEAEISDLASDKKNEIEAVMKHNFIAKPTCHTIGICDPSIPMVESSGNASIYNS 2355
            + KK +CEAE S L  DKKNEIE  MKH+F A+P+C T+G  D SIP+V++SGNASIY++
Sbjct: 898  EDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDT 957

Query: 2354 VTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKILEE-MLILDQECRNLGDE 2178
              EQK   ERT DTY+KD K NTG +A K  ENVHAEA+EKILEE M ILD E   LGDE
Sbjct: 958  DIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDE 1017

Query: 2177 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 1998
            QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV
Sbjct: 1018 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 1077

Query: 1997 FLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVN 1818
            FLFGARSVYKNIFDDRKYVETYFMQDIEK+LGLTRE+LIRMALLLGSDYTEGISGIGIVN
Sbjct: 1078 FLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 1137

Query: 1817 AIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNVE 1638
            AIEVVNAFPEEDGL KFREWIESPDPTILGKFDVQTGASS KR   +GD DVN AK++VE
Sbjct: 1138 AIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKHSVE 1197

Query: 1637 GVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQL 1458
            GVS FDE+ISQF+EDKQSA YSQNMKKIF DKHRNVSKNWHIPSSFPSEAVISAYFCPQ+
Sbjct: 1198 GVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHRNVSKNWHIPSSFPSEAVISAYFCPQV 1257

Query: 1457 DKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNE 1278
            DKSTE FSWGKPDLFVLRKFCW+KFGWG DKSNELLVPVLKEYEKRETQLRLEAFY+FNE
Sbjct: 1258 DKSTESFSWGKPDLFVLRKFCWEKFGWGGDKSNELLVPVLKEYEKRETQLRLEAFYTFNE 1317

Query: 1277 KFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMN 1098
            +FAKIRS RIKKAVKGITG QSL  MDDAGQEVSKS+ KR  N LE+G+NRS KA K+  
Sbjct: 1318 RFAKIRSKRIKKAVKGITGNQSLLLMDDAGQEVSKSRNKRKNNGLENGSNRSQKAPKKGE 1377

Query: 1097 ESVTGAQSNMEKSTPRQSRKRKVLEKFVPSEMENPERVALADSGANKVSHGRGSRRGKVQ 918
            ESV+GAQ+NMEKS+  QSRKRKVLEKFV +EMENPER+  A  G N  +  RG+RRGK Q
Sbjct: 1378 ESVSGAQNNMEKSSQSQSRKRKVLEKFVLAEMENPERLTPAGGGRNANNVFRGNRRGKGQ 1437

Query: 917  RVGRGTP----CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDP 750
            RVGRG      CAE SETSSSD IG DD QEYY EK +G Q VRRS RSRKPV+Y+VDDP
Sbjct: 1438 RVGRGRGRGRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQQEVRRSTRSRKPVDYNVDDP 1497

Query: 749  EVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDKDHIERGGGF 570
            E+ DVGKI++NKE SN+  A+QD VHGV G+ASAD SRKKQ RA DPSIDKD+IERGGGF
Sbjct: 1498 EIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRADDPSIDKDYIERGGGF 1557

Query: 569  CIDDDGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESETREDQVAEQDPVISGEIL 390
            CIDD  E GQP+VSP DDP  EAE +KDY+KMGGGFC DESETREDQVA +DPV++GE  
Sbjct: 1558 CIDDQ-EIGQPSVSPCDDPFLEAEITKDYMKMGGGFCHDESETREDQVAAKDPVVTGESP 1616

Query: 389  STCFDSLGGVDCDIGLGDST--SGSKEDIKGSESNWRTDTIDTELNLVHQSATSTDNVKN 216
            STCFDS  GV CD+GLGDST  S SKE   G E+  RTDT DTE N V Q+ATSTD+ +N
Sbjct: 1617 STCFDSSDGVHCDVGLGDSTTSSNSKEATNGLENVGRTDTFDTEPNPVVQNATSTDSARN 1676

Query: 215  NADGSSGGALTAMPFL 168
            +A  +S G+LTAM FL
Sbjct: 1677 DAGRASRGSLTAMTFL 1692


>ref|XP_006470382.1| PREDICTED: DNA repair protein UVH3-like isoform X2 [Citrus sinensis]
          Length = 1531

 Score = 2129 bits (5516), Expect = 0.0
 Identities = 1129/1528 (73%), Positives = 1238/1528 (81%), Gaps = 12/1528 (0%)
 Frame = -2

Query: 4715 LASSIAAEANESLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQ 4536
            + SSIAAEANES SKSASKSAT +             LPT+ GNVDPAV A+LPPSMQHQ
Sbjct: 1    MKSSIAAEANESSSKSASKSATANLLEEDGDEDEEIILPTMGGNVDPAVFAALPPSMQHQ 60

Query: 4535 LLVRKNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLT 4356
            LLVR NDAKGK +LSDD  Q+D  GIS E +DVVSK+ DH+KLDEMLAASIAAEED SL+
Sbjct: 61   LLVRNNDAKGKNVLSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIAAEEDGSLS 120

Query: 4355 NNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAEN 4176
            NN S                 EMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAEN
Sbjct: 121  NNASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAEN 180

Query: 4175 RQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREF 3996
            RQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREF
Sbjct: 181  RQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREF 240

Query: 3995 IFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFDNSEAASIDKSNAVTR 3816
            IFSSSFTGDKQVLTSSRV+ K+D+QQQ PSEH   DS NN AS D S  +S D+SN+VT+
Sbjct: 241  IFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASIDKSNFSSTDQSNSVTK 300

Query: 3815 LAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKI 3636
            L PEESRK F DDVETYLDERGRVR+SKVRAMGIRMTRDLQRNL+MMKE E ERPN N I
Sbjct: 301  LGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLEMMKEIEQERPNGNNI 360

Query: 3635 TDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFED 3456
            T A SML LN+TGTSK   S K  F+ TS +D +ESVS IERNK +   +G S+E+SF+D
Sbjct: 361  TGAGSMLTLNETGTSKAVPSEKRKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKD 420

Query: 3455 NGEKSRDDDDVIFAHLVAGNPFIFPADNSPRGGSCNSISDSDWEEGTTERKGNSLPDDAN 3276
            N E + DDDD IFAHL AG P IFP  NSPR  S  S+SDSDWEEGTTERKGNSL DDAN
Sbjct: 421  NSENNCDDDDDIFAHLAAGKPVIFP--NSPRAHSSISVSDSDWEEGTTERKGNSLSDDAN 478

Query: 3275 AGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCNMEEEANLQEAIRRS 3096
            AGI PPLNLE+G ISDESEVEWEEGPS APKSSL FP ES K V NMEEEANLQEAIRRS
Sbjct: 479  AGINPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVSNMEEEANLQEAIRRS 538

Query: 3095 LLDVCGEKQNYVSSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHV 2916
            LLDVC EK NY  SEH K +NLGE A DGTW +D+ENN DD N LG++  ++NE  CE+V
Sbjct: 539  LLDVCIEKPNYALSEHSKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQNESICEYV 598

Query: 2915 DGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH--- 2745
            DGL KL T GG+NNSE+I SL  +LKLS   N D KE+LINK  E    SY EQSR    
Sbjct: 599  DGLGKLDTVGGINNSEVIGSLGRELKLSEPLNSDEKEMLINKPFEKDN-SYFEQSRQGAN 657

Query: 2744 --ASDGGALCRDALCEESSTFMDLKGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGD 2571
              A+DG +LC DA CE+S T M+L  V LVKG+CLSAS KGD H T DK CS+DRS+S D
Sbjct: 658  DGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVD 717

Query: 2570 VIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVMKHNFIAKPTCHTIGICDPSIPM 2391
             +F DSS AI  + KK +CEAE S L  DKKNEIE  MKH+F A+P+C T+G  D SIP+
Sbjct: 718  AVFEDSSIAILDEDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPL 777

Query: 2390 VESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKILEE-ML 2214
            V+SSGNASIY++  EQK   ERTHDT ++D K NTG  A K  ENVHAEA+EKILEE M 
Sbjct: 778  VKSSGNASIYDTDIEQKSAEERTHDTCLEDSKQNTGILATKAIENVHAEATEKILEEEMQ 837

Query: 2213 ILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 2034
            ILD E   LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN
Sbjct: 838  ILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELAN 897

Query: 2033 LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGSD 1854
            LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK+LGLTRE+LIRMALLLGSD
Sbjct: 898  LVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSD 957

Query: 1853 YTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNG 1674
            YTEGISGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTILGKFDVQTGASS KR   +G
Sbjct: 958  YTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDG 1017

Query: 1673 DNDVNVAKNNVEGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPS 1494
            D DVN AKN+V GVS FDE+ISQF+EDKQSA YSQNMKKIF DKHRNVSKNWHIPSSFPS
Sbjct: 1018 DKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKHRNVSKNWHIPSSFPS 1077

Query: 1493 EAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRET 1314
            EAVISAYFCPQ+DKSTE FSWGKPDLFVLRKFCWDKFGWG DKSNELLVPVLKEYEKRET
Sbjct: 1078 EAVISAYFCPQVDKSTESFSWGKPDLFVLRKFCWDKFGWGGDKSNELLVPVLKEYEKRET 1137

Query: 1313 QLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESG 1134
            QLRLEAFY+FNE+FAKIRS RIKKAVKGITG QSL  MDDAGQEVSKS+KKR  N LE+G
Sbjct: 1138 QLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEVSKSRKKRKNNGLENG 1197

Query: 1133 NNRSHKASKEMNESVTGAQSNMEKSTPRQSRKRKVLEKFVPSEMENPERVALADSGANKV 954
            NNRS KA K+  ESV+GAQ+NMEKS+  QSR+RKVLEKFV +EMENPER+  A  G N  
Sbjct: 1198 NNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEMENPERLTPAGGGRNAN 1257

Query: 953  SHGRGSRRGKVQRVGRGTP----CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMR 786
            +  RG+RRGK QRVGRG      CAE SETSSSD IG DD QEYY EK +G Q VRRS R
Sbjct: 1258 NVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYYSEKFEGQQEVRRSTR 1317

Query: 785  SRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPS 606
            SRKPV+Y+VDDPE+ DVGKI++NKE SN+  A+QD VHGV G+ASAD SRKKQ RA DPS
Sbjct: 1318 SRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEASADYSRKKQHRADDPS 1377

Query: 605  IDKDHIERGGGFCIDDDGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESETREDQV 426
            IDKD+IERGGGFCI DD E G+P+VSP DDP  EAE +KDY+KMGGGFC DESETREDQV
Sbjct: 1378 IDKDYIERGGGFCI-DDREIGRPSVSPCDDPFLEAEITKDYMKMGGGFCHDESETREDQV 1436

Query: 425  AEQDPVISGEILSTCFDSLGGVDCDIGLGDST--SGSKEDIKGSESNWRTDTIDTELNLV 252
            A +DPV++GE  STC DS  GV CD+GLGDST  S SKE   G E+  RTDT DTE N V
Sbjct: 1437 AAKDPVVTGESPSTCLDSSDGVHCDVGLGDSTTSSNSKEATNGLENVGRTDTFDTEPNPV 1496

Query: 251  HQSATSTDNVKNNADGSSGGALTAMPFL 168
             Q+ATSTD+ +N+A  +S G+LTAM FL
Sbjct: 1497 VQNATSTDSARNDAGRASRGSLTAMTFL 1524



 Score = 77.4 bits (189), Expect = 1e-10
 Identities = 52/122 (42%), Positives = 71/122 (58%), Gaps = 8/122 (6%)
 Frame = -2

Query: 4856 LAKDLENQRQTQKSNAKGKKILSD-------VENISERSDAVSATDNKENLDEMLASSIA 4698
            L   +++Q   + ++AKGK +LSD       V    E  D VS + + + LDEMLA+SIA
Sbjct: 53   LPPSMQHQLLVRNNDAKGKNVLSDDLGQADTVGISPESHDVVSKSRDHKKLDEMLAASIA 112

Query: 4697 AEANESLSKSASKSA-TVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRK 4521
            AE + SLS +AS SA ++              LP + GNVDPAVLA+LPPSMQ  LLV+ 
Sbjct: 113  AEEDGSLSNNASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQM 172

Query: 4520 ND 4515
             +
Sbjct: 173  RE 174


>ref|XP_006470383.1| PREDICTED: DNA repair protein UVH3-like isoform X3 [Citrus sinensis]
          Length = 1485

 Score = 1999 bits (5178), Expect = 0.0
 Identities = 1056/1423 (74%), Positives = 1159/1423 (81%), Gaps = 12/1423 (0%)
 Frame = -2

Query: 4400 MLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQ 4221
            ++ +SIAAEED SL+NN S                 EMILPAMTGNVDPAVLAALPPSMQ
Sbjct: 60   LMRSSIAAEEDGSLSNNASASAASLPLEEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQ 119

Query: 4220 LDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVA 4041
            LDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVA
Sbjct: 120  LDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVA 179

Query: 4040 GVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFD 3861
            GVQTSRIASEANREFIFSSSFTGDKQVLTSSRV+ K+D+QQQ PSEH   DS NN AS D
Sbjct: 180  GVQTSRIASEANREFIFSSSFTGDKQVLTSSRVEGKKDEQQQIPSEHPVSDSANNGASID 239

Query: 3860 NSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLD 3681
             S  +S D+SN+VT+L PEESRK F DDVETYLDERGRVR+SKVRAMGIRMTRDLQRNL+
Sbjct: 240  KSNFSSTDQSNSVTKLGPEESRKSFADDVETYLDERGRVRLSKVRAMGIRMTRDLQRNLE 299

Query: 3680 MMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKH 3501
            MMKE E ERPN N IT A SML LN+TGTSK   S K  F+ TS +D +ESVS IERNK 
Sbjct: 300  MMKEIEQERPNGNNITGAGSMLTLNETGTSKAVPSEKRKFIGTSLDDTNESVSSIERNKQ 359

Query: 3500 AMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPADNSPRGGSCNSISDSDWEE 3321
            +   +G S+E+SF+DN E + DDDD IFAHL AG P IFP  NSPR  S  S+SDSDWEE
Sbjct: 360  STLKSGISLELSFKDNSENNCDDDDDIFAHLAAGKPVIFP--NSPRAHSSISVSDSDWEE 417

Query: 3320 GTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVC 3141
            GTTERKGNSL DDANAGI PPLNLE+G ISDESEVEWEEGPS APKSSL FP ES K V 
Sbjct: 418  GTTERKGNSLSDDANAGINPPLNLEEGGISDESEVEWEEGPSCAPKSSLSFPAESEKTVS 477

Query: 3140 NMEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLL 2961
            NMEEEANLQEAIRRSLLDVC EK NY  SEH K +NLGE A DGTW +D+ENN DD N L
Sbjct: 478  NMEEEANLQEAIRRSLLDVCIEKPNYALSEHSKCENLGENACDGTWLYDRENNMDDPNFL 537

Query: 2960 GKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCE 2781
            G++  ++NE  CE+VDGL KL T GG+NNSE+I SL  +LKLS   N D KE+LINK  E
Sbjct: 538  GESVSQQNESICEYVDGLGKLDTVGGINNSEVIGSLGRELKLSEPLNSDEKEMLINKPFE 597

Query: 2780 NSTGSYSEQSRH-----ASDGGALCRDALCEESSTFMDLKGVHLVKGQCLSASDKGDGHR 2616
                SY EQSR      A+DG +LC DA CE+S T M+L  V LVKG+CLSAS KGD H 
Sbjct: 598  KDN-SYFEQSRQGANDGANDGRSLCSDAPCEDSGTTMELTEVQLVKGRCLSASAKGDEHL 656

Query: 2615 THDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVMKHNFIAK 2436
            T DK CS+DRS+S D +F DSS AI  + KK +CEAE S L  DKKNEIE  MKH+F A+
Sbjct: 657  TRDKMCSDDRSHSVDAVFEDSSIAILDEDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAE 716

Query: 2435 PTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNEN 2256
            P+C T+G  D SIP+V+SSGNASIY++  EQK   ERTHDT ++D K NTG  A K  EN
Sbjct: 717  PSCRTVGTSDTSIPLVKSSGNASIYDTDIEQKSAEERTHDTCLEDSKQNTGILATKAIEN 776

Query: 2255 VHAEASEKILEE-MLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIA 2079
            VHAEA+EKILEE M ILD E   LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIA
Sbjct: 777  VHAEATEKILEEEMQILDHEYMYLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIA 836

Query: 2078 PMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGL 1899
            PMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK+LGL
Sbjct: 837  PMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKDLGL 896

Query: 1898 TREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFD 1719
            TRE+LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTILGKFD
Sbjct: 897  TREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLSKFREWIESPDPTILGKFD 956

Query: 1718 VQTGASSMKRCPRNGDNDVNVAKNNVEGVSGFDENISQFNEDKQSANYSQNMKKIFTDKH 1539
            VQTGASS KR   +GD DVN AKN+V GVS FDE+ISQF+EDKQSA YSQNMKKIF DKH
Sbjct: 957  VQTGASSRKRRSSDGDKDVNYAKNSVGGVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH 1016

Query: 1538 RNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSN 1359
            RNVSKNWHIPSSFPSEAVISAYFCPQ+DKSTE FSWGKPDLFVLRKFCWDKFGWG DKSN
Sbjct: 1017 RNVSKNWHIPSSFPSEAVISAYFCPQVDKSTESFSWGKPDLFVLRKFCWDKFGWGGDKSN 1076

Query: 1358 ELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEV 1179
            ELLVPVLKEYEKRETQLRLEAFY+FNE+FAKIRS RIKKAVKGITG QSL  MDDAGQEV
Sbjct: 1077 ELLVPVLKEYEKRETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGSQSLLLMDDAGQEV 1136

Query: 1178 SKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQSNMEKSTPRQSRKRKVLEKFVPSEME 999
            SKS+KKR  N LE+GNNRS KA K+  ESV+GAQ+NMEKS+  QSR+RKVLEKFV +EME
Sbjct: 1137 SKSRKKRKNNGLENGNNRSQKAPKKAEESVSGAQNNMEKSSQSQSRERKVLEKFVLAEME 1196

Query: 998  NPERVALADSGANKVSHGRGSRRGKVQRVGRGTP----CAELSETSSSDGIGGDDAQEYY 831
            NPER+  A  G N  +  RG+RRGK QRVGRG      CAE SETSSSD IG DD QEYY
Sbjct: 1197 NPERLTPAGGGRNANNVFRGNRRGKGQRVGRGRGRRRLCAEQSETSSSDDIGSDDTQEYY 1256

Query: 830  DEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDAS 651
             EK +G Q VRRS RSRKPV+Y+VDDPE+ DVGKI++NKE SN+  A+QD VHGV G+AS
Sbjct: 1257 SEKFEGQQEVRRSTRSRKPVDYNVDDPEIADVGKILSNKESSNEEEAKQDSVHGVTGEAS 1316

Query: 650  ADCSRKKQLRAGDPSIDKDHIERGGGFCIDDDGESGQPNVSPSDDPIFEAETSKDYLKMG 471
            AD SRKKQ RA DPSIDKD+IERGGGFCI DD E G+P+VSP DDP  EAE +KDY+KMG
Sbjct: 1317 ADYSRKKQHRADDPSIDKDYIERGGGFCI-DDREIGRPSVSPCDDPFLEAEITKDYMKMG 1375

Query: 470  GGFCEDESETREDQVAEQDPVISGEILSTCFDSLGGVDCDIGLGDST--SGSKEDIKGSE 297
            GGFC DESETREDQVA +DPV++GE  STC DS  GV CD+GLGDST  S SKE   G E
Sbjct: 1376 GGFCHDESETREDQVAAKDPVVTGESPSTCLDSSDGVHCDVGLGDSTTSSNSKEATNGLE 1435

Query: 296  SNWRTDTIDTELNLVHQSATSTDNVKNNADGSSGGALTAMPFL 168
            +  RTDT DTE N V Q+ATSTD+ +N+A  +S G+LTAM FL
Sbjct: 1436 NVGRTDTFDTEPNPVVQNATSTDSARNDAGRASRGSLTAMTFL 1478



 Score = 85.5 bits (210), Expect = 5e-13
 Identities = 44/62 (70%), Positives = 48/62 (77%)
 Frame = -3

Query: 4585 MLIQLF*LLCLHQCSISFLFGRMMQRARRFCQMIQTNLIMRELVQKRMMWFQRIMITKSL 4406
            ML QLF LLCLHQCSISFLFG M QRAR F +MI    I   LVQK MMW+QR++ITKSL
Sbjct: 1    MLTQLFLLLCLHQCSISFLFGTMTQRARTFYRMIWAKPIRWALVQKVMMWYQRVVITKSL 60

Query: 4405 MR 4400
            MR
Sbjct: 61   MR 62


>ref|XP_006446453.1| hypothetical protein CICLE_v10014025mg [Citrus clementina]
            gi|557549064|gb|ESR59693.1| hypothetical protein
            CICLE_v10014025mg [Citrus clementina]
          Length = 1250

 Score = 1761 bits (4560), Expect = 0.0
 Identities = 939/1246 (75%), Positives = 1023/1246 (82%), Gaps = 6/1246 (0%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLWDLLAPVGRRVSVETLSGKKLAIDASIWM+QFMKAMRDEKGEMVRNAHLIGFFR
Sbjct: 1    MGVHGLWDLLAPVGRRVSVETLSGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHLIGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKENLDEMLASSIAAEANES 4680
            ELA DLENQRQ QK + +GKK+LSD+EN SER+D VSA+D+KENLDEMLA+SIAAEANES
Sbjct: 121  ELALDLENQRQIQKRDPEGKKVLSDMENCSERTDGVSASDDKENLDEMLAASIAAEANES 180

Query: 4679 LSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKK 4500
             SKSASKSAT +             LPT+ GNVDPAV A+LPPSMQHQLLVR NDAKGK 
Sbjct: 181  SSKSASKSATANLLEEDGDEDEEIMLPTMGGNVDPAVFAALPPSMQHQLLVRNNDAKGKN 240

Query: 4499 ILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXX 4320
            +LSDD  Q+D  GIS E +D VSK+ DH+ LDEMLAASIAAEED SL+NN S        
Sbjct: 241  VLSDDLGQADTVGISPESHDGVSKSRDHKMLDEMLAASIAAEEDGSLSNNASASAASLPL 300

Query: 4319 XXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPE 4140
                     EMILPAMTGNVDPAVLAALPPSMQLDLLVQMRE+LMAENRQKYQKVKKAPE
Sbjct: 301  EEEDGDEDEEMILPAMTGNVDPAVLAALPPSMQLDLLVQMREQLMAENRQKYQKVKKAPE 360

Query: 4139 KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 3960
            KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV
Sbjct: 361  KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 420

Query: 3959 LTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDD 3780
            LTSSRV+ K+D+QQQ PSEH   DSVNN AS D S  +S D+SN+VT+L P ESRK F D
Sbjct: 421  LTSSRVEGKKDEQQQIPSEHPVSDSVNNGASIDKSNFSSTDQSNSVTKLGPGESRKSFAD 480

Query: 3779 DVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKT 3600
            DVETYLDERGRVR+SKVRAMGIRMTRDLQRNL MMKE E +RPN N IT A SML LN+T
Sbjct: 481  DVETYLDERGRVRLSKVRAMGIRMTRDLQRNLAMMKEIEQDRPNGNNITGAGSMLTLNET 540

Query: 3599 GTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVI 3420
            GTS    S KS F+ TS +D +ESVS IERNK +   +G S+E+SF+DN E + DDDD I
Sbjct: 541  GTSNAVPSEKSKFIGTSLDDTNESVSSIERNKQSTLKSGISLELSFKDNSENNCDDDDDI 600

Query: 3419 FAHLVAGNPFIFPADNSPRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDG 3240
            FAHL AG P IFP  NSPR  S  S+SDSDWEEGTTERKG+SL DDANAGI PPLNLE+G
Sbjct: 601  FAHLAAGKPVIFP--NSPRAHSSISVSDSDWEEGTTERKGSSLSDDANAGINPPLNLEEG 658

Query: 3239 NISDESEVEWEEGPSAAPKSSLLFPTESVKIVCNMEEEANLQEAIRRSLLDVCGEKQNYV 3060
             ISDESEVEWEEGPS APKSSL FP ES K V N+EEEANLQEAIRRSLLDVC EK NY 
Sbjct: 659  GISDESEVEWEEGPSCAPKSSLSFPAESEKTVSNIEEEANLQEAIRRSLLDVCIEKPNYA 718

Query: 3059 SSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGV 2880
             SEH K +NLGE A DGTW +D+ENN DD N LG++  +++E  CE+VDGL KL T GG+
Sbjct: 719  LSEHNKCENLGENACDGTWLYDRENNMDDPNFLGESVSQQHESICEYVDGLGKLDTVGGI 778

Query: 2879 NNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH-----ASDGGALCRD 2715
            NNSE+I SL  +LKL    N D KE+LINK  E    SY EQSR      A+DG +LC D
Sbjct: 779  NNSEVIGSLGRELKLYEPRNSDEKEMLINKPFEKD-NSYFEQSRQGANDGANDGRSLCSD 837

Query: 2714 ALCEESSTFMDLKGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQI 2535
            A CE+S T M+L  V LVKG+CLSAS KGD H T DK CS+DRS+S D +F DSS AI  
Sbjct: 838  APCEDSGTTMELTEVQLVKGRCLSASAKGDEHLTRDKMCSDDRSHSVDAVFEDSSIAILD 897

Query: 2534 DGKKIDCEAEISDLASDKKNEIEAVMKHNFIAKPTCHTIGICDPSIPMVESSGNASIYNS 2355
            + KK +CEAE S L  DKKNEIE  MKH+F A+P+C T+G  D SIP+V++SGNASIY++
Sbjct: 898  EDKKNNCEAETSVLPGDKKNEIEVEMKHDFTAEPSCRTVGTSDTSIPLVKTSGNASIYDT 957

Query: 2354 VTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDE 2178
              EQK   ERT DTY+KD K NTG +A K  ENVHAEA+EKIL EEM ILD E   LGDE
Sbjct: 958  DIEQKSAEERTPDTYLKDSKQNTGIFATKAIENVHAEATEKILEEEMQILDHEYMYLGDE 1017

Query: 2177 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 1998
            QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV
Sbjct: 1018 QKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDV 1077

Query: 1997 FLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVN 1818
            FLFGARSVYKNIFDDRKYVETYFMQDIEK+LGLTRE+LIRMALLLGSDYTEGISGIGIVN
Sbjct: 1078 FLFGARSVYKNIFDDRKYVETYFMQDIEKDLGLTREKLIRMALLLGSDYTEGISGIGIVN 1137

Query: 1817 AIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNVE 1638
            AIEVVNAFPEEDGL KFREWIESPDPTILGKFDVQTGASS KR   +GD DVN AK++VE
Sbjct: 1138 AIEVVNAFPEEDGLSKFREWIESPDPTILGKFDVQTGASSRKRRSSDGDKDVNYAKHSVE 1197

Query: 1637 GVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSF 1500
            GVS FDE+ISQF+EDKQSA YSQNMKKIF DKH     N  IP SF
Sbjct: 1198 GVSEFDESISQFDEDKQSAEYSQNMKKIFMDKH---VLNKLIPYSF 1240


>ref|XP_007031407.1| DNA-repair protein UVH3, putative isoform 1 [Theobroma cacao]
            gi|508710436|gb|EOY02333.1| DNA-repair protein UVH3,
            putative isoform 1 [Theobroma cacao]
          Length = 1670

 Score = 1604 bits (4153), Expect = 0.0
 Identities = 961/1735 (55%), Positives = 1174/1735 (67%), Gaps = 51/1735 (2%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+GKKLAIDASIWMVQFMKAMRDEKGEMVRNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDG TP LKRRTVIARRRQREN+QAKIRKTAEKLL+NHLK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPVLKRRTVIARRRQRENSQAKIRKTAEKLLLNHLKQMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISE--RSDAVSATDNKE-NLDEMLASSIAAEA 4689
            ELAKDLE+QR+ QK+NAKG+K+ SD    +     +AV  T++   NL E     I AE 
Sbjct: 121  ELAKDLEDQRKKQKNNAKGRKVSSDKPYDANIVGCNAVELTNSDHVNLKEKSEMPIPAED 180

Query: 4688 NESLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAK 4509
                         +              LP IDGN+DP VLA+LP SMQ QLL  +N+AK
Sbjct: 181  GGGDENEDEYEEII--------------LPEIDGNIDPDVLAALPQSMQRQLL-SQNNAK 225

Query: 4508 GKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXX 4329
             KKI S+D DQS+    ++E + + S +Y+ +KLDEMLAAS+AA+ED++L NN S     
Sbjct: 226  DKKIFSNDLDQSNMERSNAEHDPMASSSYNQEKLDEMLAASLAAQEDSNLANNASTSAAA 285

Query: 4328 XXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKK 4149
                         MILPAM GNVDPAVLAALPPS+QLDLLVQMRE+LMA NRQKYQKVKK
Sbjct: 286  IHSEEDGDEDEE-MILPAMHGNVDPAVLAALPPSLQLDLLVQMREKLMAVNRQKYQKVKK 344

Query: 4148 APEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGD 3969
            APE+FSELQIQ+YLKTVAFRREIDEVQ+AAAGRGVAGVQTSRIASEANREFIFSSSFTGD
Sbjct: 345  APEQFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGD 404

Query: 3968 KQVLTSSRVKDKEDKQQQTPSEH--SFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESR 3795
            KQVLTS+R +  EDKQQ+  S H   FL+SV            SI KSN VT   P E  
Sbjct: 405  KQVLTSARKERDEDKQQEIHSNHPSGFLNSVK-----------SICKSNVVTESVPNEPT 453

Query: 3794 KGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESML 3615
               D+DV TYLDERG+VRVS+VR MGIRMTRDLQRNLD+MKE E ER N NK  + +S+ 
Sbjct: 454  SAPDEDVGTYLDERGQVRVSRVRGMGIRMTRDLQRNLDLMKEIEQERTNSNKDMNVQSVP 513

Query: 3614 NLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNGE-KSR 3438
            + N+ GTSK   SS++ F++TSH+ + ESV+L E N+ + F     +EI+FED+G  K  
Sbjct: 514  DRNRIGTSKNS-SSENQFLKTSHDGNCESVNLNESNQQSAFKTEACMEITFEDDGRNKFF 572

Query: 3437 DDDDVIFAHLVAGNPFIFPADNSPRGGSCNSISDSD--WEEGTTERKGNSLPDDANAGIK 3264
            DDDD IFA L AG+P   P+  +   G   S SDSD  WEEG TE   + +    +A   
Sbjct: 573  DDDDDIFARLAAGDPVTLPSPENKPSGKHTSDSDSDCEWEEGMTEGNWDGVAHCMDAKNN 632

Query: 3263 PPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQEAIRRSLL 3090
            P  + ++ NISDESEVEWEE PS APKSS   P ES  ++    +EEEA+LQEAIRRSL 
Sbjct: 633  P--SYKESNISDESEVEWEEEPSDAPKSSS-GPVESGVMLSKGYLEEEADLQEAIRRSLT 689

Query: 3089 DVCGEKQNYVSSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDG 2910
            D+  +K NY  SE  K K  G+   +G      +++ D  +       ++N+  C+++D 
Sbjct: 690  DIGAKKSNYFPSEFEKLKKFGKNMDEGFGSPHGKSSMDGPSFREGKVNQENKS-CQNLDR 748

Query: 2909 LEKLVTDGGVNNSEMIDSLESQLKLS-VAHNPDNKEILINKSCENSTGSYSEQSRHASDG 2733
            ++KL +   ++ SE  +  E   +LS +AH+ D    L  K CE S G +SEQSR     
Sbjct: 749  VQKLYSVDELSISEASNFPE---RLSPIAHSSDRNGTLSYKPCERSDGPHSEQSR----- 800

Query: 2732 GALCRDALCEESSTFMDLKGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDS 2553
                 D       T ++ + VHL  G+  +AS++ DG  T     S+D S S DV+  D 
Sbjct: 801  -----DIASTVLVTTLE-REVHLAPGKQSNASNEVDGLSTVSNSWSKDSSRSLDVVLDDL 854

Query: 2552 SYAIQIDGKKIDCEAEISDLASDKKNEIEAVM-------KHNFIAKPTCHTIGICDPSIP 2394
              AI +D KK D E E S L S+KK+E+E  +       K++  AK    +I I D SIP
Sbjct: 855  PGAILVD-KKNDSEGEPSTLVSEKKSEVETELCSMVEDKKNDLEAKSLHQSIEIVDSSIP 913

Query: 2393 MVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL-EEM 2217
            +V+SS N +  +   EQ+L  +RT++ Y+ + +  T    +K N+    E ++  L EE+
Sbjct: 914  VVQSSVNKATSDIHIEQELVGDRTYENYVNEAEQETDMANVKGNDYADVEFTQVSLDEEL 973

Query: 2216 LILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELA 2037
            LIL QEC NLGDEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL 
Sbjct: 974  LILGQECMNLGDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELT 1033

Query: 2036 NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGS 1857
            N+VDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKE+GLTRE+L+RMALLLGS
Sbjct: 1034 NIVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKEIGLTREKLMRMALLLGS 1093

Query: 1856 DYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRN 1677
            DYTEG+SGIGIVNAIEVVNAFPEEDGL KFREWIESPDP ILGK +VQ G+S+ KR  + 
Sbjct: 1094 DYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPAILGKLNVQEGSSARKRGSKF 1153

Query: 1676 GDNDVNVAKNN-------VEGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNW 1518
             D DV  AK +       +EG+S FD+NISQ +++ QS +   ++K+IF DKHRNVSKNW
Sbjct: 1154 SDKDVISAKTSMRDSGSPIEGLSSFDQNISQADKNTQSTDCIDDIKQIFMDKHRNVSKNW 1213

Query: 1517 HIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVL 1338
            HIPSSFPSEAVIS Y  PQ+DKSTEPF+WG+PDLFVLRK CWDKFGWGS KS++LL+PVL
Sbjct: 1214 HIPSSFPSEAVISEYCSPQVDKSTEPFTWGRPDLFVLRKLCWDKFGWGSQKSDDLLLPVL 1273

Query: 1337 KEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKR 1158
            +EYEKRETQLRLEAFY+FNE+FAKIRS RIKKAVKGITG QS E +DDA Q+VSKS+K+R
Sbjct: 1274 REYEKRETQLRLEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDAMQQVSKSRKRR 1333

Query: 1157 GKNVLESGNNRSHKASKEMNESVTGAQS-NMEKSTPRQSRKRKVLEKFVPSEMENPERVA 981
              + ++SG+++S + S    + V+  QS +MEKS P+ SRKR        S  E P R A
Sbjct: 1334 RVSPVKSGDDKSGEPSNWKEDIVSQRQSKSMEKSVPKPSRKRPPQTSPGKSTPEQPPRAA 1393

Query: 980  LADSGANKVSHGRGSRRGKVQRVGR--GTPCAELSETSSSDGIGGDDAQEYYDEKLKGPQ 807
                  NK S G G R+G   R  R   +P  E SETSSS G  G+D QE   EKL  PQ
Sbjct: 1394 RRRK-TNKQSPGIGRRKGHGARRRRRKASPDFEQSETSSSGGNSGNDYQEVDGEKLDRPQ 1452

Query: 806  AVRRSMRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQ 627
             VRRSMR+R PVNY+V+D E D+VG  ++NKE S +   EQ        +A+ D + +  
Sbjct: 1453 QVRRSMRTRNPVNYNVNDLE-DEVG--LSNKESSCEEAMEQ--------EAADDLNEENP 1501

Query: 626  LRAGDPSID----KDHIERGGGFCIDDDGESGQPNVSPSDDPIFEAETSKDYLKMGGGFC 459
              A DP+ +    +D++ERGGGFC+D+  E G P+ S   DP  EAE SKDYLKMGGGFC
Sbjct: 1502 SEARDPTFEEDFSRDYLERGGGFCMDEK-EVGHPDESQGVDPTPEAEASKDYLKMGGGFC 1560

Query: 458  EDESETREDQVA--EQDPVISGEILSTCFDSLGGV------DCDIGLGDSTSGSKEDIKG 303
             DE+ET +D  A  +QDPV          DS  GV      D +    + +S  K  + G
Sbjct: 1561 IDENETSKDPDAACDQDPV-------AATDSSNGVAFTDKADDNAASAEPSSSPKRSLDG 1613

Query: 302  SESNWRTDTIDTELNLVHQSATSTDNVKNNADGSSG----------GALTAMPFL 168
             +     +   TELNL HQ+A + D+ K +A               G L+AMP L
Sbjct: 1614 LQ-----NASFTELNLGHQNAANEDDSKGSAPPQETTVNDTVTAFVGGLSAMPTL 1663


>ref|XP_012444035.1| PREDICTED: DNA repair protein UVH3 isoform X2 [Gossypium raimondii]
          Length = 1707

 Score = 1526 bits (3950), Expect = 0.0
 Identities = 928/1763 (52%), Positives = 1151/1763 (65%), Gaps = 79/1763 (4%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+GKKLAIDASIWMVQFMKAMRDEKGEM+RNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDG TP LKRRTVIARRRQRENAQAKIRKTAEKLL+N LK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKE-------NLDEML-ASS 4704
            ELAKDL+NQR+ QK+N K K  +   +N S+ ++ V    N E        L E L   S
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TNFVGCNANVELTKEGDVKLKEKLEVPS 179

Query: 4703 IAAEANESLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVR 4524
            IA +   +  +   +   +              LP IDGN+DP VLA+LP SMQ QLL +
Sbjct: 180  IAKDGGHNEDEDEDEDEVI-------------ILPDIDGNIDPDVLAALPQSMQRQLL-K 225

Query: 4523 KNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPS 4344
            + DAKGKKIL +D +QS+     +E + + S +Y  +KLDEMLAAS+A +ED++L N  +
Sbjct: 226  QTDAKGKKILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNLANAST 285

Query: 4343 IXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKY 4164
                             EMILPAM GNVDPAVLAALPPS+QLDLL QMRERLMAENRQKY
Sbjct: 286  --SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKY 343

Query: 4163 QKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSS 3984
            QKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+AAAGRGVAGVQTSRIASEANREFIFSS
Sbjct: 344  QKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSS 403

Query: 3983 SFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLDSVNNVASFDNSEAASIDKSNAVTRLA 3810
            SFTGDKQ LTS+R +  EDKQQ+  S+H   FL SV +             KSN      
Sbjct: 404  SFTGDKQALTSARKEIDEDKQQERHSDHPSGFLGSVKSSC-----------KSNVAAESV 452

Query: 3809 PEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITD 3630
            P+ES    D+DV TY+D  GR+RVS+VR MGIRMTRDLQRNLD+MKE E ER N+NK  +
Sbjct: 453  PDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVN 512

Query: 3629 AESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNG 3450
             +S+ + +K   SK+ +S+ + FVETSH+D+ ESV++ E N+ + F   + +EI+FED+G
Sbjct: 513  VKSVPDKSKIDASKS-VSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDG 571

Query: 3449 EKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGSCNSISDSDWEEGTTERKGNSLPDDAN 3276
            +    DDD IFA L AG P   P+  + S R     S SD +WEEG  E K + +    N
Sbjct: 572  KTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMN 631

Query: 3275 AGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQEAIR 3102
            A  +  L  ++ NI+D+SEVEWEE PS APKSS   P ES +++     EEE++LQEAIR
Sbjct: 632  A--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIR 688

Query: 3101 RSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTWFHDKENNQDDQNLLGKNAPKKNELFC 2925
            RSL DV  EK N   S+  +SKNLGE +  D    H+K +     +    +A       C
Sbjct: 689  RSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGSLHEKGDT--GASSFPGDAVNWQNKSC 746

Query: 2924 EHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH 2745
            E++D   K  T    + SE  +S ES    S  HN D    +++K  E S GS+SEQSRH
Sbjct: 747  ENLDRPRKPCTVNEPSISETFNSPESP---SPVHNSDKNMTILSKFSERSDGSHSEQSRH 803

Query: 2744 ASDGGALCRDALCEESSTFMDL--KGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGD 2571
                          E++ F+    K V    G+ L  S + DG  T      +D S+S D
Sbjct: 804  -------------NETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFD 850

Query: 2570 VIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVM-----KHNFIAKPTCHTIGICD 2406
               GD    IQ+D KK   E E S+L SD K+ IEA +     K +F AKP+  ++   +
Sbjct: 851  AAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 909

Query: 2405 PSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL 2226
             SIP V+SS N  I +   EQ+L  + T++  +   + +T    IK N+N   + S+  L
Sbjct: 910  LSIPTVQSSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASL 969

Query: 2225 -EEMLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 2049
             EE+LILDQEC N+ DEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY
Sbjct: 970  DEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 1029

Query: 2048 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMAL 1869
            MEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTRE+L+RMAL
Sbjct: 1030 MELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMAL 1089

Query: 1868 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKR 1689
            LLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTILGK +VQ G+S+ KR
Sbjct: 1090 LLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKR 1149

Query: 1688 CPRNGDNDVNVAKNNV------EGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVS 1527
             P++ + DVN  K +        G S  D+N  Q +++ QS + + ++K+IF DKHRNVS
Sbjct: 1150 GPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVS 1209

Query: 1526 KNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLV 1347
            KNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+PDLFVLRK CW+KFGWGS KS+ELL+
Sbjct: 1210 KNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLL 1269

Query: 1346 PVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSK 1167
            PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIKKAVKGITG QS E +DD  Q+VSKS+
Sbjct: 1270 PVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSR 1329

Query: 1166 KKRGKNVLESGNNRSHKASKEMNESVTGAQS-NMEKSTPRQSRKRKVLEKFVPSEMENPE 990
            +KR  + ++SG+++S + S +  +  +  QS + +KS P+ SRKR+   K V  EM  PE
Sbjct: 1330 RKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPE 1389

Query: 989  --RVALADSGANKVSHGRGSRRGKVQ-RVGRGTPCAELSETSSSDGIGGDDAQEYYDEKL 819
                 L     NK S G G  RG  + R  +G+   +  ETSSS G  G+  QE   EKL
Sbjct: 1390 PQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKL 1449

Query: 818  KGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCS 639
              P+ VRRSM +R PVNY+V D E D+ G  +++KE S +   E+        +A  D  
Sbjct: 1450 DQPREVRRSMHTRNPVNYTVKDLE-DEGG--LSHKESSGEDAMEK--------EAGEDVK 1498

Query: 638  RKKQLRAGDPSIDK---DHIERGGGFCIDD------------------------------ 558
             K Q  A +PS+D    D++E GGGFC+D+                              
Sbjct: 1499 EKIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFY 1558

Query: 557  -DGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESET--REDQVAEQDPVISGEILS 387
             +G+  QP+ S   +P  E  ++ DYLKMGGGFC +ESET    D    +DPV + E  S
Sbjct: 1559 MEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQATE-SS 1617

Query: 386  TCFDSLGGVDCDIGLGDSTSGSKEDI--KGSESNWRTDTIDTELNLVHQSATSTDNVKNN 213
             CF  +   D +I   + +  ++  +  K        D  +  LNL H++A + D+ K +
Sbjct: 1618 NCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDSKES 1677

Query: 212  A---DGSSGG-----ALTAMPFL 168
            A   + S  G      L+AMP L
Sbjct: 1678 ASLPEASDVGTTFISGLSAMPSL 1700


>gb|KJB11470.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1696

 Score = 1514 bits (3919), Expect = 0.0
 Identities = 918/1755 (52%), Positives = 1139/1755 (64%), Gaps = 71/1755 (4%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+GKKLAIDASIWMVQFMKAMRDEKGEM+RNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDG TP LKRRTVIARRRQRENAQAKIRKTAEKLL+N LK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKENLDEMLASSIAAEANES 4680
            ELAKDL+NQR+ QK+N K K  +   +N S+ ++ V    N E         +  E +  
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TNFVGCNANVE---------LTKEGDVK 170

Query: 4679 LSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKK 4500
            L +     +                 P IDGN+DP VLA+LP SMQ QLL        K+
Sbjct: 171  LKEKLEVPSIAKDGGHNEDEDEDEDEPDIDGNIDPDVLAALPQSMQRQLL--------KQ 222

Query: 4499 ILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXX 4320
            IL +D +QS+     +E + + S +Y  +KLDEMLAAS+A +ED++L N  +        
Sbjct: 223  ILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNLANAST--SVAAIP 280

Query: 4319 XXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPE 4140
                     EMILPAM GNVDPAVLAALPPS+QLDLL QMRERLMAENRQKYQKVKKAPE
Sbjct: 281  SEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPE 340

Query: 4139 KFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQV 3960
            KFSELQIQ+YLKTVAFRREIDEVQ+AAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ 
Sbjct: 341  KFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQA 400

Query: 3959 LTSSRVKDKEDKQQQTPSEH--SFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKGF 3786
            LTS+R +  EDKQQ+  S+H   FL SV +             KSN      P+ES    
Sbjct: 401  LTSARKEIDEDKQQERHSDHPSGFLGSVKSSC-----------KSNVAAESVPDESTSAP 449

Query: 3785 DDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNLN 3606
            D+DV TY+D  GR+RVS+VR MGIRMTRDLQRNLD+MKE E ER N+NK  + +S+ + +
Sbjct: 450  DEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKS 509

Query: 3605 KTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDD 3426
            K   SK+ +S+ + FVETSH+D+ ESV++ E N+ + F   + +EI+FED+G+    DDD
Sbjct: 510  KIDASKS-VSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDGKTEYFDDD 568

Query: 3425 VIFAHLVAGNPFIFPA--DNSPRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPPLN 3252
             IFA L AG P   P+  + S R     S SD +WEEG  E K + +    NA  +  L 
Sbjct: 569  DIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLL 626

Query: 3251 LEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQEAIRRSLLDVCG 3078
             ++ NI+D+SEVEWEE PS APKSS   P ES +++     EEE++LQEAIRRSL DV  
Sbjct: 627  NKESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGV 685

Query: 3077 EKQNYVSSEHGKSKNLGE-IAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEK 2901
            EK N   S+  +SKNLGE +  D    H+K +     +    +A       CE++D   K
Sbjct: 686  EKSNSFPSDVIESKNLGENLDEDFGSLHEKGDT--GASSFPGDAVNWQNKSCENLDRPRK 743

Query: 2900 LVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRHASDGGALC 2721
              T    + SE  +S ES    S  HN D    +++K  E S GS+SEQSRH        
Sbjct: 744  PCTVNEPSISETFNSPESP---SPVHNSDKNMTILSKFSERSDGSHSEQSRH-------- 792

Query: 2720 RDALCEESSTFMDL--KGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSY 2547
                  E++ F+    K V    G+ L  S + DG  T      +D S+S D   GD   
Sbjct: 793  -----NETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPD 847

Query: 2546 AIQIDGKKIDCEAEISDLASDKKNEIEAVM-----KHNFIAKPTCHTIGICDPSIPMVES 2382
             IQ+D KK   E E S+L SD K+ IEA +     K +F AKP+  ++   + SIP V+S
Sbjct: 848  TIQVD-KKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQS 906

Query: 2381 SGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL-EEMLILD 2205
            S N  I +   EQ+L  + T++  +   + +T    IK N+N   + S+  L EE+LILD
Sbjct: 907  SANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILD 966

Query: 2204 QECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVD 2025
            QEC N+ DEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVD
Sbjct: 967  QECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVD 1026

Query: 2024 GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTE 1845
            GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTRE+L+RMALLLGSDYTE
Sbjct: 1027 GVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTE 1086

Query: 1844 GISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDND 1665
            G+SGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTILGK +VQ G+S+ KR P++ + D
Sbjct: 1087 GVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKD 1146

Query: 1664 VNVAKNNV------EGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSS 1503
            VN  K +        G S  D+N  Q +++ QS + + ++K+IF DKHRNVSKNWHIPSS
Sbjct: 1147 VNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSS 1206

Query: 1502 FPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEK 1323
            FPSEAVISAY  PQ+DKSTEPF+WG+PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EK
Sbjct: 1207 FPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEK 1266

Query: 1322 RETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVL 1143
            RETQLR+EAFY+FNE+FAKIRS RIKKAVKGITG QS E +DD  Q+VSKS++KR  + +
Sbjct: 1267 RETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPV 1326

Query: 1142 ESGNNRSHKASKEMNESVTGAQS-NMEKSTPRQSRKRKVLEKFVPSEMENPE--RVALAD 972
            +SG+++S + S +  +  +  QS + +KS P+ SRKR+   K V  EM  PE     L  
Sbjct: 1327 QSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRR 1386

Query: 971  SGANKVSHGRGSRRGKVQ-RVGRGTPCAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRR 795
               NK S G G  RG  + R  +G+   +  ETSSS G  G+  QE   EKL  P+ VRR
Sbjct: 1387 RETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRR 1446

Query: 794  SMRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQLRAG 615
            SM +R PVNY+V D E D+ G  +++KE S +   E+        +A  D   K Q  A 
Sbjct: 1447 SMHTRNPVNYTVKDLE-DEGG--LSHKESSGEDAMEK--------EAGEDVKEKIQCEAR 1495

Query: 614  DPSIDK---DHIERGGGFCIDD-------------------------------DGESGQP 537
            +PS+D    D++E GGGFC+D+                               +G+  QP
Sbjct: 1496 EPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQP 1555

Query: 536  NVSPSDDPIFEAETSKDYLKMGGGFCEDESET--REDQVAEQDPVISGEILSTCFDSLGG 363
            + S   +P  E  ++ DYLKMGGGFC +ESET    D    +DPV + E  S CF  +  
Sbjct: 1556 DTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQATE-SSNCFAFMDK 1614

Query: 362  VDCDIGLGDSTSGSKEDI--KGSESNWRTDTIDTELNLVHQSATSTDNVKNNA---DGSS 198
             D +I   + +  ++  +  K        D  +  LNL H++A + D+ K +A   + S 
Sbjct: 1615 ADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDSKESASLPEASD 1674

Query: 197  GG-----ALTAMPFL 168
             G      L+AMP L
Sbjct: 1675 VGTTFISGLSAMPSL 1689


>gb|KJB11469.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1700

 Score = 1512 bits (3915), Expect = 0.0
 Identities = 923/1763 (52%), Positives = 1145/1763 (64%), Gaps = 79/1763 (4%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+GKKLAIDASIWMVQFMKAMRDEKGEM+RNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDG TP LKRRTVIARRRQRENAQAKIRKTAEKLL+N LK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKE-------NLDEML-ASS 4704
            ELAKDL+NQR+ QK+N K K  +   +N S+ ++ V    N E        L E L   S
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TNFVGCNANVELTKEGDVKLKEKLEVPS 179

Query: 4703 IAAEANESLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVR 4524
            IA +   +  +   +   +              LP IDGN+DP VLA+LP SMQ QLL  
Sbjct: 180  IAKDGGHNEDEDEDEDEVI-------------ILPDIDGNIDPDVLAALPQSMQRQLL-- 224

Query: 4523 KNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPS 4344
                  K+IL +D +QS+     +E + + S +Y  +KLDEMLAAS+A +ED++L N  +
Sbjct: 225  ------KQILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNLANAST 278

Query: 4343 IXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKY 4164
                             EMILPAM GNVDPAVLAALPPS+QLDLL QMRERLMAENRQKY
Sbjct: 279  --SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKY 336

Query: 4163 QKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSS 3984
            QKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+AAAGRGVAGVQTSRIASEANREFIFSS
Sbjct: 337  QKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSS 396

Query: 3983 SFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLDSVNNVASFDNSEAASIDKSNAVTRLA 3810
            SFTGDKQ LTS+R +  EDKQQ+  S+H   FL SV +             KSN      
Sbjct: 397  SFTGDKQALTSARKEIDEDKQQERHSDHPSGFLGSVKSSC-----------KSNVAAESV 445

Query: 3809 PEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITD 3630
            P+ES    D+DV TY+D  GR+RVS+VR MGIRMTRDLQRNLD+MKE E ER N+NK  +
Sbjct: 446  PDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVN 505

Query: 3629 AESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNG 3450
             +S+ + +K   SK+ +S+ + FVETSH+D+ ESV++ E N+ + F   + +EI+FED+G
Sbjct: 506  VKSVPDKSKIDASKS-VSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDG 564

Query: 3449 EKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGSCNSISDSDWEEGTTERKGNSLPDDAN 3276
            +    DDD IFA L AG P   P+  + S R     S SD +WEEG  E K + +    N
Sbjct: 565  KTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMN 624

Query: 3275 AGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQEAIR 3102
            A  +  L  ++ NI+D+SEVEWEE PS APKSS   P ES +++     EEE++LQEAIR
Sbjct: 625  A--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIR 681

Query: 3101 RSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTWFHDKENNQDDQNLLGKNAPKKNELFC 2925
            RSL DV  EK N   S+  +SKNLGE +  D    H+K +     +    +A       C
Sbjct: 682  RSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGSLHEKGDT--GASSFPGDAVNWQNKSC 739

Query: 2924 EHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH 2745
            E++D   K  T    + SE  +S ES    S  HN D    +++K  E S GS+SEQSRH
Sbjct: 740  ENLDRPRKPCTVNEPSISETFNSPESP---SPVHNSDKNMTILSKFSERSDGSHSEQSRH 796

Query: 2744 ASDGGALCRDALCEESSTFMDL--KGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGD 2571
                          E++ F+    K V    G+ L  S + DG  T      +D S+S D
Sbjct: 797  -------------NETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFD 843

Query: 2570 VIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVM-----KHNFIAKPTCHTIGICD 2406
               GD    IQ+D KK   E E S+L SD K+ IEA +     K +F AKP+  ++   +
Sbjct: 844  AAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 902

Query: 2405 PSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL 2226
             SIP V+SS N  I +   EQ+L  + T++  +   + +T    IK N+N   + S+  L
Sbjct: 903  LSIPTVQSSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASL 962

Query: 2225 -EEMLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 2049
             EE+LILDQEC N+ DEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY
Sbjct: 963  DEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 1022

Query: 2048 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMAL 1869
            MEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTRE+L+RMAL
Sbjct: 1023 MELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMAL 1082

Query: 1868 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKR 1689
            LLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTILGK +VQ G+S+ KR
Sbjct: 1083 LLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKR 1142

Query: 1688 CPRNGDNDVNVAKNNV------EGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVS 1527
             P++ + DVN  K +        G S  D+N  Q +++ QS + + ++K+IF DKHRNVS
Sbjct: 1143 GPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVS 1202

Query: 1526 KNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLV 1347
            KNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+PDLFVLRK CW+KFGWGS KS+ELL+
Sbjct: 1203 KNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLL 1262

Query: 1346 PVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSK 1167
            PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIKKAVKGITG QS E +DD  Q+VSKS+
Sbjct: 1263 PVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSR 1322

Query: 1166 KKRGKNVLESGNNRSHKASKEMNESVTGAQS-NMEKSTPRQSRKRKVLEKFVPSEMENPE 990
            +KR  + ++SG+++S + S +  +  +  QS + +KS P+ SRKR+   K V  EM  PE
Sbjct: 1323 RKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPE 1382

Query: 989  --RVALADSGANKVSHGRGSRRGKVQ-RVGRGTPCAELSETSSSDGIGGDDAQEYYDEKL 819
                 L     NK S G G  RG  + R  +G+   +  ETSSS G  G+  QE   EKL
Sbjct: 1383 PQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKL 1442

Query: 818  KGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASADCS 639
              P+ VRRSM +R PVNY+V D E D+ G  +++KE S +   E+        +A  D  
Sbjct: 1443 DQPREVRRSMHTRNPVNYTVKDLE-DEGG--LSHKESSGEDAMEK--------EAGEDVK 1491

Query: 638  RKKQLRAGDPSIDK---DHIERGGGFCIDD------------------------------ 558
             K Q  A +PS+D    D++E GGGFC+D+                              
Sbjct: 1492 EKIQCEAREPSLDNIYGDYLETGGGFCMDERGTDLPDANQDVDLETEPTNDYLKMGGGFY 1551

Query: 557  -DGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESET--REDQVAEQDPVISGEILS 387
             +G+  QP+ S   +P  E  ++ DYLKMGGGFC +ESET    D    +DPV + E  S
Sbjct: 1552 MEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFCMEESETIGNPDAGNYEDPVQATE-SS 1610

Query: 386  TCFDSLGGVDCDIGLGDSTSGSKEDI--KGSESNWRTDTIDTELNLVHQSATSTDNVKNN 213
             CF  +   D +I   + +  ++  +  K        D  +  LNL H++A + D+ K +
Sbjct: 1611 NCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDSKES 1670

Query: 212  A---DGSSGG-----ALTAMPFL 168
            A   + S  G      L+AMP L
Sbjct: 1671 ASLPEASDVGTTFISGLSAMPSL 1693


>ref|XP_012081974.1| PREDICTED: DNA repair protein UVH3 [Jatropha curcas]
          Length = 1706

 Score = 1507 bits (3901), Expect = 0.0
 Identities = 929/1752 (53%), Positives = 1141/1752 (65%), Gaps = 68/1752 (3%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLWDLLAPVGRRVSVETL+GKKLAIDASIWM+QFMKAMRDEKGEMVRNAHL+GFFR
Sbjct: 1    MGVHGLWDLLAPVGRRVSVETLAGKKLAIDASIWMIQFMKAMRDEKGEMVRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYL+TKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLL+NHLKT RLK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLLNHLKTTRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDV----ENISERSDAVSATDNKENLDEMLASSIAAE 4692
            ELAKDLENQR+ QK++AKGKKIL+D     ++I E +D  S   ++E LDEMLA+SIAAE
Sbjct: 121  ELAKDLENQRKNQKNDAKGKKILADQTHVEDDILENNDVESY--DQEKLDEMLAASIAAE 178

Query: 4691 ANESLSKSASKSATV--SXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVR-- 4524
             + +L+ +AS SA    +             LP + G+VDPAVLA+LP SMQ  LL+R  
Sbjct: 179  EDGNLNNNASTSAAADPAVVMEDDDENEEIILPAMYGHVDPAVLAALPISMQLDLLMRER 238

Query: 4523 ----------------------KNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQK 4410
                                  K + +GK++L D     +  G SSE+ND+  +NY+ +K
Sbjct: 239  SMSDNRNNQGVEKDTGNQSEDHKTNLRGKEVLLDHLTNME--GGSSERNDL-EENYNQEK 295

Query: 4409 LDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPP 4230
            LD+MLAASIAAEE   LT + S                 EMILPA+ G VDPAVLAALPP
Sbjct: 296  LDQMLAASIAAEEAERLTKSASTSAAAIPSEEESGDEDEEMILPALFGRVDPAVLAALPP 355

Query: 4229 SMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGR 4050
            SMQLDLLVQMRERLMAENRQ+YQKVKKAPEKFSELQI+AYLKTVAFRREID+VQKAA+G+
Sbjct: 356  SMQLDLLVQMRERLMAENRQRYQKVKKAPEKFSELQIEAYLKTVAFRREIDQVQKAASGK 415

Query: 4049 GVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEHSFLDSVNNVA 3870
            GV+GVQTSRIASEANREFIFSSSFTGDKQ+LTS+ V    ++QQQ    HS  DS+ +V 
Sbjct: 416  GVSGVQTSRIASEANREFIFSSSFTGDKQLLTSAGVYRNGNEQQQRSIGHSSSDSLAHVL 475

Query: 3869 SFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQR 3690
            S          KSN VT L P ESR+  D+DVETYLDERG +RVS+VRAMG+RMTRDLQR
Sbjct: 476  S--------TSKSNTVTGLVPHESRQVIDEDVETYLDERGHIRVSRVRAMGMRMTRDLQR 527

Query: 3689 NLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIER 3510
            NLD+MKE EHER + NK   A+S +N +  G  K  + SK   V++S++++ +SV L ER
Sbjct: 528  NLDLMKEIEHERTHANKNASAQSEVNRDNIGYPKR-IPSKIQHVKSSNDNNGDSVKLNER 586

Query: 3509 NKHAMFNNGNSVEISFEDNGE-KSRDDDDVIFAHLVAGNPF-IFPADNSP-RGGSCNSIS 3339
            N  ++ NN   +EISFE +GE KS   DD IF  LVAG P  I   DN   R  S +S+S
Sbjct: 587  NAESILNNKGLLEISFEVDGESKSLGSDDEIFTSLVAGKPVTISSVDNGTLRRESSDSVS 646

Query: 3338 DSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTE 3159
            DSDWEEG  E +GN+   ++N    PP   +  NI  +SEVEWEEG       SL  P+E
Sbjct: 647  DSDWEEGIIEVRGNNYELESNP---PP---KGSNIGSDSEVEWEEGVCDVENFSL--PSE 698

Query: 3158 SVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGEIAHDGTWFHDKEN 2985
            S K+     +EE+A+LQEAIRRSL D   EK N+  SEH K     E A  G  F D E+
Sbjct: 699  SGKLASKGYLEEQADLQEAIRRSLEDFGDEKFNHALSEHEKQTCSEENAFSGVGFLDSED 758

Query: 2984 NQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKE 2805
            N     LL K+A ++N+   E +    KL +   ++ S +  S   QLKLS  H+PD   
Sbjct: 759  NTCRPILLEKDANQQNKHSPEILTSA-KLDSMDQIDVSHVFSSSGRQLKLSEVHDPDKMS 817

Query: 2804 ILINKSCENSTGSYSEQS-RHASDGGALCRDALCEESSTFMDLKGVHLVKGQCLSASDKG 2628
            IL  KSC    GS + QS + AS GG  CR     ES   +  K  H+          + 
Sbjct: 818  ILQIKSCVRDLGSNTAQSSQDASIGGNFCRGMRSAESVAPLKAKEAHMTVELSSDTLVQD 877

Query: 2627 DGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVMKHN 2448
             G  T     S   S+    I G  +  I  D           DL +  + EI  ++   
Sbjct: 878  VGLSTSSNISSAHGSHVCKPISGKGAQNILTD-----------DLGNKMEEEISMLVNEE 926

Query: 2447 FIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIK 2268
                P  H+  I + S+  +E S ++++   V E  L  ++  D    +  ++       
Sbjct: 927  QKTDPLVHSAEIANSSMSSMEPSKDSAVGTDV-EPNLAGDKNSDNQFNENCMDK----FG 981

Query: 2267 VNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLP 2091
             NEN+ A+ +E  L EE+ IL QE  NLGDE KKLERNAESV+SEMFAECQELLQMFGLP
Sbjct: 982  RNENLQADFAEASLQEEIFILGQERINLGDEWKKLERNAESVNSEMFAECQELLQMFGLP 1041

Query: 2090 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEK 1911
            YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAR+VYKNIFDDRKYVETYFM+DIEK
Sbjct: 1042 YIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARNVYKNIFDDRKYVETYFMKDIEK 1101

Query: 1910 ELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTIL 1731
            ELGL RE+LIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTIL
Sbjct: 1102 ELGLNREKLIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLKKFREWIESPDPTIL 1161

Query: 1730 GKFDVQTGASSMKRCPRNGDNDVNVAKNNVEGVSGFDENISQFNEDKQSANYSQNMKKIF 1551
             KF  Q G+S  ++  + GD+D N A +N   V+ F +NI Q +E +QS + +Q +++IF
Sbjct: 1162 EKFVRQNGSSMRRKGSKVGDSDSNCATSNTGEVNSFGQNIPQVHEQEQSEDNTQEIQRIF 1221

Query: 1550 TDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGS 1371
               HRNVSKNWHIPSSFPS+AV+SAY  PQ+DKSTEPF+WGKPD+ VLRK CW+KFGWG 
Sbjct: 1222 MVNHRNVSKNWHIPSSFPSDAVLSAYSSPQVDKSTEPFTWGKPDIQVLRKLCWEKFGWGI 1281

Query: 1370 DKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDA 1191
             KS+ELL+PVLKEY KRETQLR+EAFYSFNE+FAKIRS RIKKA+KGITG Q  E M++A
Sbjct: 1282 QKSDELLLPVLKEYNKRETQLRMEAFYSFNERFAKIRSKRIKKALKGITGNQFSELMENA 1341

Query: 1190 GQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQSN-MEKSTPRQSRKRKVLEKFV 1014
             +E S+S++KR     ESG+ ++ + SK     +   ++N +EKS  ++SRK  V E  V
Sbjct: 1342 VEENSRSREKRTVMPDESGDCKTERPSKRAKGGIHNDKNNSLEKSATKRSRKSTVGEP-V 1400

Query: 1013 PSEMENPERVALADSGANKVSH--------GRGSRRGKVQRVGRGTPCAELSETSSSDGI 858
             SE++N    A      +K SH        GRG  RG+ +  G+G    E S +SS D  
Sbjct: 1401 LSEVKNQGEQAEGRKSTHKGSHGGGRGKGRGRGCGRGRGRGRGKGDLGFEQSNSSSDDFT 1460

Query: 857  GGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGK-IVNNKECSNKGVAEQD 681
             GDD  E + +K +  Q +RRSMRSRKPV+YS DD E+D V K +  + + S+K   E D
Sbjct: 1461 DGDDKLENHVQKSEESQGLRRSMRSRKPVSYSPDDLEIDIVDKQLDQDDKNSDKEAVEPD 1520

Query: 680  --WVHGVRGDASADCSRKKQLRAGDPSIDKDHIERGGGFCIDDDGESGQPNVSPSDDPIF 507
               V  V  D+SA  + K+ L    P   KDH+E GGGF  D+DG +GQ  VS +  P  
Sbjct: 1521 LFGVLEVCRDSSASLNDKEDLL---PENSKDHLEMGGGFVTDEDG-NGQAGVSNNSYPC- 1575

Query: 506  EAETSKDYLKMGGGFCEDESETREDQVAEQDPVIS--GEILSTCFDS--LGGVDCDIGLG 339
            E + SK YL+MGGGFC DESET  +Q A   P ++  GEI  + + S  +   DC  G  
Sbjct: 1576 EPDASKHYLEMGGGFCMDESETGTNQDAAHSPSMAAVGEIFESPYTSGLMKEADCPKGPV 1635

Query: 338  DSTSG---SKEDIKGSESNWR------------TDTIDTELNLVHQSATSTDNVKNNADG 204
             S SG   +  D++  ++               TDT+D      H  A S  ++      
Sbjct: 1636 QSVSGDERTSNDVQDGQTTISFVIEPTKHGVDVTDTVD------HSQANS--SLAKTTGS 1687

Query: 203  SSGGALTAMPFL 168
             + G L+AMPFL
Sbjct: 1688 ETIGRLSAMPFL 1699


>gb|KHG04183.1| DNA repair UVH3 -like protein [Gossypium arboreum]
          Length = 1697

 Score = 1498 bits (3877), Expect = 0.0
 Identities = 914/1744 (52%), Positives = 1137/1744 (65%), Gaps = 74/1744 (4%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+GKKLAIDASIWMVQFMKAMRDEKGEM+RNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDG TP LKRRTVIARRRQRENAQAKIRKTAEKLL+N LK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKE-------NLDEML-ASS 4704
            ELAKDL+NQR+ QK+N K K  +   +N S+ ++ V    N E        L E L   S
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TNFVGCNANVELTKEGDVKLKEKLEVPS 179

Query: 4703 IAAEANESLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVR 4524
            IA +  ++  +   +   +               P ID N+DP VLA+LP SMQ QLL +
Sbjct: 180  IAKDGGQNEDEDEDEVIIL---------------PDIDENIDPDVLAALPQSMQRQLL-K 223

Query: 4523 KNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPS 4344
            + DAKGKKIL +D +QS+    S+E + + S +Y  +KLDEMLAAS+A +ED++L N  +
Sbjct: 224  QTDAKGKKILLNDLNQSNKERSSTEHDAMKSTSYSQEKLDEMLAASLATKEDSNLANAST 283

Query: 4343 IXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKY 4164
                             EMILPAM GNVDPAVLAALPPS+QLDLL QMRERLMAENRQKY
Sbjct: 284  --SVAAIPSEEDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKY 341

Query: 4163 QKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSS 3984
            QKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+AAAG+GVAGVQTSRIASEANREFIFSS
Sbjct: 342  QKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGQGVAGVQTSRIASEANREFIFSS 401

Query: 3983 SFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLDSVNNVASFDNSEAASIDKSNAVTRLA 3810
            SFTGDKQ  TS+R +  EDKQQ+  S+H   FL SV +             KSN      
Sbjct: 402  SFTGDKQAFTSARKERDEDKQQERHSDHPSGFLGSVKSSC-----------KSNVAAESV 450

Query: 3809 PEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITD 3630
            P+ES     +DV TYLDE GRVRVS+VR MGIRMTRDLQRNLD+MKE E ER N+NK  +
Sbjct: 451  PDESTSAPHEDVGTYLDETGRVRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVN 510

Query: 3629 AESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNG 3450
             +S+ + +K   SK+ +S+ + FVETS +D+ ESV++ E N+ + F   + +EI+FED+G
Sbjct: 511  VQSVPDKSKIDASKS-VSNGNQFVETSRDDNGESVNVNESNRKSAFETESCMEITFEDDG 569

Query: 3449 EKSR-DDDDVIFAHLVAGNPFIFPA--DNSPRGGSCNSISDSDWEEGTTERKGNSLPDDA 3279
            +    DDDD IFA L AG+P   P+  + S R  +  S SD +WEEG  E K     DD 
Sbjct: 570  KTEYFDDDDDIFACLAAGDPVTLPSPKEKSLRKQASGSDSDFEWEEGVVEGKW----DDV 625

Query: 3278 NAGIKPPLNL--EDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQE 3111
              G+    NL  ++ NI+D+SEVEWEE PS APKSS   P ES +++     EEE++LQE
Sbjct: 626  TPGMNAEHNLLNKESNINDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQE 684

Query: 3110 AIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTWFHDKENNQDDQNLLGKNAPKKNE 2934
            AIRRSL DV  EK N   S+  +SKNLGE +  D    H+K +     +    +A     
Sbjct: 685  AIRRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFESLHEKGDT--GASSFPGDAVNWQN 742

Query: 2933 LFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQ 2754
              CE++D  +K  T      SE  +S E   + S  HN D    +++K  E S GS+SEQ
Sbjct: 743  KSCENLDRPQKPCTGNEPIISETFNSPE---RPSPVHNSDKNMTILSKFSERSDGSHSEQ 799

Query: 2753 SRHASDGGALCRDALCEESSTFMDL--KGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSN 2580
            SRH              E++ F+    K V    G+ L  S++ DG  T      +  S+
Sbjct: 800  SRH-------------NETAEFVATLEKEVDFPTGKHLDVSEEVDGLSTISDSWFKVNSH 846

Query: 2579 SGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVM-----KHNFIAKPTCHTIG 2415
            S D              KK   E E S+L +   + +EA +     K +F AKP+  ++ 
Sbjct: 847  SFDAAHD----------KKTVSENEPSNLVNVNTSSVEAEILDQDKKIDFEAKPSQQSVD 896

Query: 2414 ICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASE 2235
              D SIP V+SS N  I++   EQ+L  + T++  +   + +T    IK N+N   + S+
Sbjct: 897  TVDLSIPTVQSSANKVIFDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSK 956

Query: 2234 KIL-EEMLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 2058
              L EE+LILDQEC N+ DEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ
Sbjct: 957  ASLDEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQ 1016

Query: 2057 CAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIR 1878
            CAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTRE+L+R
Sbjct: 1017 CAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMR 1076

Query: 1877 MALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASS 1698
            MALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KF+EWIESPDPTILGK +VQ G+S+
Sbjct: 1077 MALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFQEWIESPDPTILGKLNVQEGSSA 1136

Query: 1697 MKRCPRNGDNDVNVAKNNV------EGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHR 1536
             KR P++ + DVN  K +        G S  D+N  Q +++ QS +   ++K+IF DKHR
Sbjct: 1137 WKRGPKSTEKDVNSTKTSTGGSESNNGASSLDQNSFQADKNMQSTDCINDIKQIFMDKHR 1196

Query: 1535 NVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNE 1356
            NVSKNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+PDLFVLRK CW+KFGWGS KS+E
Sbjct: 1197 NVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDE 1256

Query: 1355 LLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVS 1176
            LL+PVL+EYEKRETQLR+EAFY+FNE+FAKIRS RIKKAVKGITG QS E +DD  Q+ S
Sbjct: 1257 LLLPVLREYEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQAS 1316

Query: 1175 KSKKKRGKNVLESGNNRSHKASKEMNESVTGAQS-NMEKSTPRQSRKRKVLEKFVPSEME 999
            KS+ KR  + ++SG+++S + S +  +  +  QS + +KS P+ SRKR+   K V  EM 
Sbjct: 1317 KSRNKRRVSPVQSGDDKSGEPSNKKEDIASQCQSKSTDKSVPKTSRKRQNSGKDVSFEMR 1376

Query: 998  NPERV--ALADSGANKVSHGRGSRRGKVQ-RVGRGTPCAELSETSSSDGIGGDDAQEYYD 828
             PE     L     NK S G G  RG  + R  +G+   +  ETSSS G  G+D QE   
Sbjct: 1377 TPEPQLRTLRRRKTNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNDNQEVDG 1436

Query: 827  EKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQDWVHGVRGDASA 648
            EKL  P+ VRRSMR+R PVNY+V+D E D+ G  +++KE S +   E+        +A  
Sbjct: 1437 EKLDQPREVRRSMRTRNPVNYTVNDLE-DEGG--LSHKESSGEDAMEK--------EAVE 1485

Query: 647  DCSRKKQLRAGDPS---IDKDHIERGGGFCIDD--------------------------- 558
            D   K Q  A +PS   ID D++E GGGFC+D+                           
Sbjct: 1486 DVKEKIQCEAREPSLDNIDGDYLETGGGFCMDERGTDLPDANQDFDLETEPTNDYLKMGG 1545

Query: 557  ----DGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESETREDQVA--EQDPVISGE 396
                +G+  Q + S   +P  E  ++ DYLKMGGGFC +ESET ++  A   QDPV + E
Sbjct: 1546 GFCMEGDIDQSDTSQDINPFSETGSANDYLKMGGGFCMEESETIDNPDAGNYQDPVQATE 1605

Query: 395  ILSTCFDSLGGVDCDIGLGDSTSGSKEDI--KGSESNWRTDTIDTELNLVHQSATSTDNV 222
              S CF      D +I   + +  ++  +  K        +  +  LNL HQ+A + D+ 
Sbjct: 1606 -SSNCFAFTDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPNEANDALNLSHQNAANKDDS 1664

Query: 221  KNNA 210
            K +A
Sbjct: 1665 KESA 1668


>ref|XP_008230637.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Prunus mume]
          Length = 1681

 Score = 1494 bits (3868), Expect = 0.0
 Identities = 902/1772 (50%), Positives = 1127/1772 (63%), Gaps = 88/1772 (4%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+G++LAIDASIWMVQFMKAMRDEKGEMVRNAH++GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGRRLAIDASIWMVQFMKAMRDEKGEMVRNAHVLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYL+TKPVFVFDGGTPALKRRTVIARRRQRENAQ+K+RKTAEKLL+NHLK  +LK
Sbjct: 61   RICKLLYLRTKPVFVFDGGTPALKRRTVIARRRQRENAQSKLRKTAEKLLLNHLKATKLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENIS-----ERSDAVSATDNKENLDEMLASSIAA 4695
             LA+D++NQRQ QK++AKGK+ L D    S     E++D    + N+E LDEMLA+SI A
Sbjct: 121  VLAEDIKNQRQNQKNDAKGKQSLPDQTGRSGDDNLEKNDMALLSSNQEKLDEMLAASIQA 180

Query: 4694 EANESLSKSASK-SATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKN 4518
            E    L+K+ASK +A V              LP + G VDPAVLA+LPPSMQ  LL++ N
Sbjct: 181  EEEGGLAKNASKFTAAVPCEEDGEEDDEEMILPEMHGEVDPAVLANLPPSMQLGLLLQSN 240

Query: 4517 ----DAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNN 4350
                DAKGKK++SD   Q++  GI+ E  + VS++ + +KLDEM+AASIAAEEDA  TNN
Sbjct: 241  KQDNDAKGKKVMSD---QTEMVGINLENCEAVSRSCNQEKLDEMVAASIAAEEDAGATNN 297

Query: 4349 PSIXXXXXXXXXXXXXXXXE----MILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMA 4182
             S                 +    MILP M G VDPAVLAALPPSMQLDLLVQ+RERLMA
Sbjct: 298  ASTSTASIFVEEDVDEDGDDDDEEMILPEMHGKVDPAVLAALPPSMQLDLLVQIRERLMA 357

Query: 4181 ENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANR 4002
            ENRQKYQKVKK P KFSELQIQ+YLKTVAFRREID+VQKAAAGRGV+GV +SRIASEA+R
Sbjct: 358  ENRQKYQKVKKDPGKFSELQIQSYLKTVAFRREIDQVQKAAAGRGVSGVHSSRIASEAHR 417

Query: 4001 EFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFDNSEAASIDKSNAV 3822
            EFIFSSSFTGDKQVL S+R  DK   +QQ P EH             ++   S+  +N V
Sbjct: 418  EFIFSSSFTGDKQVLASARA-DKNGDKQQAPKEHP------------SNSRNSVPSTNNV 464

Query: 3821 TRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVN 3642
            T   P+ES   FDD++ETYLDERG +RVS+VRAMGIRMTRDLQRNLD+MKE E E+ N N
Sbjct: 465  TGATPDESTSVFDDNIETYLDERGHLRVSRVRAMGIRMTRDLQRNLDLMKEIEQEKTNTN 524

Query: 3641 KITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESV--------------------- 3525
            KI +   MLN      SK+  S++   +ETS  D+ +S+                     
Sbjct: 525  KIINTRDMLNERDIDISKSSFSNRK-VIETSCGDNGDSIDTGVLRSHPDQKKVLESSIGD 583

Query: 3524 -SLIERNKHAMFNNGNSVEISFEDNGE-KSRDDDDVIFAHLVAGNPFIFPADNSPRGGSC 3351
             SL +RN          +EIS ED GE KS D DD +FA LVAGN     A++  R  S 
Sbjct: 584  NSLNDRNNQCTLKLETPIEISIEDGGESKSFDGDDDLFASLVAGNAVTTNANDILRKQSS 643

Query: 3350 NSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLL 3171
             S SD DWEEGT E             +K  +   +GN+SD+SEVEWEEG     +++  
Sbjct: 644  GSDSDCDWEEGTVE-------------VKSKVPRVEGNMSDDSEVEWEEGVCGITENTSS 690

Query: 3170 FPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGEIAHDGTWFH 2997
            FP E  + V     EEEAN QEAIRRSL D+   K  Y SS   K +  G  A+ G  F 
Sbjct: 691  FPRECGETVSKGYFEEEANFQEAIRRSLEDIGDVKCAYASSAEEKLQCFGGEAYKGADFI 750

Query: 2996 DKENNQDDQNLLGKNAPKKNELFCEHVDGLEKL--VTDGGVNNSEMIDSLESQLKLSVAH 2823
            D+E    +  L+GK   ++NE  C+ VDG++K+  VTD        +DS  +Q   +V+ 
Sbjct: 751  DRETKIVEAVLVGKIGKRQNESSCDIVDGVKKMKSVTD--------LDSPPAQTMQNVSE 802

Query: 2822 NPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDLKGVHLVKGQCLS 2643
              +                              C    C ES T    K VH++  Q L 
Sbjct: 803  REN-----------------------------FCGGMQCAESVTPSGTKEVHMITEQVLG 833

Query: 2642 ASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEA 2463
              ++ D   T      +++++S D +                C+A  +D   D+KNEIEA
Sbjct: 834  TFNEDDSLSTLPNTLEKNKAHSFDAL---------------SCDA--TDWVDDQKNEIEA 876

Query: 2462 VMKHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTG 2283
                    +P+CH + + +P+      +G  +    V +  +  E++HD + ++ + +  
Sbjct: 877  --------EPSCHIVEMANPAALTGSLTGKLTNDCDVDKTWVK-EKSHDNFFQESEHSWD 927

Query: 2282 KYAIKVNENVHAEASEKILEE-MLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQ 2106
            K ++  + N   EA+E  LEE MLIL QEC NLGDEQ++LERN ESVSSEMF ECQELLQ
Sbjct: 928  KSSLNSDANARVEATEANLEEEMLILGQECMNLGDEQRRLERNVESVSSEMFTECQELLQ 987

Query: 2105 MFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFM 1926
            MFG+PYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGA+SVYKNIFDDRKYVETYFM
Sbjct: 988  MFGIPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGAQSVYKNIFDDRKYVETYFM 1047

Query: 1925 QDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESP 1746
            +D+EKELGL+RE+LIRMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KFR+WIESP
Sbjct: 1048 KDVEKELGLSREKLIRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFRDWIESP 1107

Query: 1745 DPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNVEGVSGFDENISQFNEDKQSANYSQN 1566
            DPTILGKFD +TG+ + KR  + GD D+N +++N E VS FD+N     E KQSA+  + 
Sbjct: 1108 DPTILGKFDGETGSGAKKRGSKFGDKDIN-SQSNKEEVSAFDQNNCHGQEHKQSADLIEE 1166

Query: 1565 MKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDK 1386
            +K+ F DKHR VSKNWHIP SFPSEAV  AY CPQ+DKSTEPF+WGKPD FVLRK CW+K
Sbjct: 1167 IKQTFMDKHRKVSKNWHIPPSFPSEAVSVAYTCPQVDKSTEPFTWGKPDHFVLRKLCWEK 1226

Query: 1385 FGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLE 1206
            FGWG+ K++ELL+PVLKEY+KRETQLRLEAFY+FNE+FA+IRS RIKKAVKGI G QS E
Sbjct: 1227 FGWGTQKADELLIPVLKEYDKRETQLRLEAFYTFNERFARIRSKRIKKAVKGIAGNQSSE 1286

Query: 1205 SMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQSNME-KSTPRQSRKRKV 1029
             ++DA QEVS+S+KK   +  E+G+++S K S+   + V   Q N + KST +QSRKR+ 
Sbjct: 1287 LIEDAAQEVSRSRKKGSISTDEAGDDKSEKLSEGTEKGVFRDQRNSKGKSTIKQSRKRRT 1346

Query: 1028 LEKFVPSEMENPERVALADS---GANKVSHGRGSR---RGKVQRVGRGTPCAELSETSSS 867
             E  VPS+   P  +A   +    AN    GRG +   RGK    G+  P AE SETS S
Sbjct: 1347 TEVPVPSDRPKPAEMARTTNRRLRANGKGRGRGRKVLGRGK----GKENPSAEASETSPS 1402

Query: 866  --DGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVN--NKECSNK 699
              D    DD  + + E ++G   VRRS R RKPVNY+V+D E DDV   ++  + +CSN+
Sbjct: 1403 KTDDDDDDDGMDLHMETVEGSGEVRRSGRLRKPVNYTVNDLENDDVDDPLDHCDTKCSNE 1462

Query: 698  GVAEQ-DWVHGVRGDASADCSRKKQLRAGDPS----IDKDHIERGGGFCIDDD------- 555
               EQ  W  G   +  +  S KKQ  AG+ S    +  D++E GGGFC+ +D       
Sbjct: 1463 ESGEQLSWDEGKCEEGPSRFSEKKQQNAGNLSPNAGLCNDYLETGGGFCLVEDETGELAG 1522

Query: 554  -------GESGQPNVSPSDDPIFEAETSKDYLKMGGGFCED-ESETREDQVAEQDPVISG 399
                    E+G+  +S   DP FEAE S+DY KMGG  C D +     D++  Q    + 
Sbjct: 1523 GGFCPVEDETGELGLSQHHDPSFEAEVSEDYHKMGGRLCRDGQVGNDRDEIGVQATAAAS 1582

Query: 398  E--ILSTCFDSLGGVDCDIGLGDSTSGSKEDIKGSESNWRTDTIDTELNLVHQSATSTDN 225
            E   L      +  VD       S+ G+K  ++G E   RT   DTE  +  + A+  D+
Sbjct: 1583 EDSDLPNFSGFVNKVDFGNASVQSSVGTKRPLQGFEGCERTGAYDTEQIINDEIASKNDD 1642

Query: 224  ------------VKNNADGSSG-GALTAMPFL 168
                        V N+   S+G GAL+AMPFL
Sbjct: 1643 HSKLSVSLQENTVDNSGKTSAGVGALSAMPFL 1674


>ref|XP_012444025.1| PREDICTED: DNA repair protein UVH3 isoform X1 [Gossypium raimondii]
          Length = 1710

 Score = 1475 bits (3818), Expect = 0.0
 Identities = 902/1734 (52%), Positives = 1123/1734 (64%), Gaps = 79/1734 (4%)
 Frame = -2

Query: 5132 DASIWMVQFMKAMRDEKGEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVI 4953
            DASIWMVQFMKAMRDEKGEM+RNAHL+GFFRRICKLLYLKTKPVFVFDG TP LKRRTVI
Sbjct: 33   DASIWMVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVI 92

Query: 4952 ARRRQRENAQAKIRKTAEKLLINHLKTMRLKELAKDLENQRQTQKSNAKGKKILSDVENI 4773
            ARRRQRENAQAKIRKTAEKLL+N LK MRLKELAKDL+NQR+ QK+N K K  +   +N 
Sbjct: 93   ARRRQRENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQ 152

Query: 4772 SERSDAVSATDNKE-------NLDEML-ASSIAAEANESLSKSASKSATVSXXXXXXXXX 4617
            S+ ++ V    N E        L E L   SIA +   +  +   +   +          
Sbjct: 153  SD-TNFVGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVI---------- 201

Query: 4616 XXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKKILSDDSDQSDNAGISSEKNDV 4437
                LP IDGN+DP VLA+LP SMQ QLL ++ DAKGKKIL +D +QS+     +E + +
Sbjct: 202  ---ILPDIDGNIDPDVLAALPQSMQRQLL-KQTDAKGKKILLNDLNQSNKERSGTEHDAM 257

Query: 4436 VSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVD 4257
             S +Y  +KLDEMLAAS+A +ED++L N  +                 EMILPAM GNVD
Sbjct: 258  TSTSYSQEKLDEMLAASLATQEDSNLANAST--SVAAIPSEDDGDEDEEMILPAMHGNVD 315

Query: 4256 PAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREID 4077
            PAVLAALPPS+QLDLL QMRERLMAENRQKYQKVKKAPEKFSELQIQ+YLKTVAFRREID
Sbjct: 316  PAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREID 375

Query: 4076 EVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEH- 3900
            EVQ+AAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ LTS+R +  EDKQQ+  S+H 
Sbjct: 376  EVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHP 435

Query: 3899 -SFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRA 3723
              FL SV +             KSN      P+ES    D+DV TY+D  GR+RVS+VR 
Sbjct: 436  SGFLGSVKSSC-----------KSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRG 484

Query: 3722 MGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHE 3543
            MGIRMTRDLQRNLD+MKE E ER N+NK  + +S+ + +K   SK+ +S+ + FVETSH+
Sbjct: 485  MGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKS-VSNGNQFVETSHD 543

Query: 3542 DDSESVSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPA--DNS 3369
            D+ ESV++ E N+ + F   + +EI+FED+G+    DDD IFA L AG P   P+  + S
Sbjct: 544  DNGESVNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKS 603

Query: 3368 PRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAA 3189
             R     S SD +WEEG  E K + +    NA  +  L  ++ NI+D+SEVEWEE PS A
Sbjct: 604  LRKQPSGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLLNKESNITDDSEVEWEEEPSDA 661

Query: 3188 PKSSLLFPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IA 3018
            PKSS   P ES +++     EEE++LQEAIRRSL DV  EK N   S+  +SKNLGE + 
Sbjct: 662  PKSSS-GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLD 720

Query: 3017 HDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLK 2838
             D    H+K +     +    +A       CE++D   K  T    + SE  +S ES   
Sbjct: 721  EDFGSLHEKGDT--GASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESP-- 776

Query: 2837 LSVAHNPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDL--KGVHL 2664
             S  HN D    +++K  E S GS+SEQSRH              E++ F+    K V  
Sbjct: 777  -SPVHNSDKNMTILSKFSERSDGSHSEQSRH-------------NETAEFVATLEKEVDF 822

Query: 2663 VKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASD 2484
              G+ L  S + DG  T      +D S+S D   GD    IQ+D KK   E E S+L SD
Sbjct: 823  PTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVD-KKTGSEDEPSNLVSD 881

Query: 2483 KKNEIEAVM-----KHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTH 2319
             K+ IEA +     K +F AKP+  ++   + SIP V+SS N  I +   EQ+L  + T+
Sbjct: 882  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 941

Query: 2318 DTYIKDRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVS 2142
            +  +   + +T    IK N+N   + S+  L EE+LILDQEC N+ DEQ+KLERNAESVS
Sbjct: 942  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 1001

Query: 2141 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 1962
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 1002 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1061

Query: 1961 FDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1782
            FDDRKYVETYFMQDIEKELGLTRE+L+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEED
Sbjct: 1062 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1121

Query: 1781 GLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNV------EGVSGFD 1620
            GL KFREWIESPDPTILGK +VQ G+S+ KR P++ + DVN  K +        G S  D
Sbjct: 1122 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLD 1181

Query: 1619 ENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEP 1440
            +N  Q +++ QS + + ++K+IF DKHRNVSKNWHIPSSFPSEAVISAY  PQ+DKSTEP
Sbjct: 1182 QNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEP 1241

Query: 1439 FSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIR 1260
            F+WG+PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EKRETQLR+EAFY+FNE+FAKIR
Sbjct: 1242 FTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIR 1301

Query: 1259 SNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGA 1080
            S RIKKAVKGITG QS E +DD  Q+VSKS++KR  + ++SG+++S + S +  +  +  
Sbjct: 1302 SKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRC 1361

Query: 1079 QS-NMEKSTPRQSRKRKVLEKFVPSEMENPE--RVALADSGANKVSHGRGSRRGKVQ-RV 912
            QS + +KS P+ SRKR+   K V  EM  PE     L     NK S G G  RG  + R 
Sbjct: 1362 QSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRR 1421

Query: 911  GRGTPCAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVG 732
             +G+   +  ETSSS G  G+  QE   EKL  P+ VRRSM +R PVNY+V D E D+ G
Sbjct: 1422 RKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKDLE-DEGG 1480

Query: 731  KIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDK---DHIERGGGFCID 561
              +++KE S +   E+        +A  D   K Q  A +PS+D    D++E GGGFC+D
Sbjct: 1481 --LSHKESSGEDAMEK--------EAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMD 1530

Query: 560  D-------------------------------DGESGQPNVSPSDDPIFEAETSKDYLKM 474
            +                               +G+  QP+ S   +P  E  ++ DYLKM
Sbjct: 1531 ERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKM 1590

Query: 473  GGGFCEDESET--REDQVAEQDPVISGEILSTCFDSLGGVDCDIGLGDSTSGSKEDI--K 306
            GGGFC +ESET    D    +DPV + E  S CF  +   D +I   + +  ++  +  K
Sbjct: 1591 GGGFCMEESETIGNPDAGNYEDPVQATE-SSNCFAFMDKADDNIDSAEPSVNAEGSLLDK 1649

Query: 305  GSESNWRTDTIDTELNLVHQSATSTDNVKNNA---DGSSGG-----ALTAMPFL 168
                    D  +  LNL H++A + D+ K +A   + S  G      L+AMP L
Sbjct: 1650 LQNGGKTPDEANDALNLNHRNAANKDDSKESASLPEASDVGTTFISGLSAMPSL 1703


>ref|XP_012444044.1| PREDICTED: DNA repair protein UVH3 isoform X3 [Gossypium raimondii]
          Length = 1706

 Score = 1466 bits (3796), Expect = 0.0
 Identities = 899/1734 (51%), Positives = 1119/1734 (64%), Gaps = 79/1734 (4%)
 Frame = -2

Query: 5132 DASIWMVQFMKAMRDEKGEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVI 4953
            DASIWMVQFMKAMRDEKGEM+RNAHL+GFFRRICKLLYLKTKPVFVFDG TP LKRRTVI
Sbjct: 33   DASIWMVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVI 92

Query: 4952 ARRRQRENAQAKIRKTAEKLLINHLKTMRLKELAKDLENQRQTQKSNAKGKKILSDVENI 4773
            ARRRQRENAQAKIRKTAEKLL+N LK MRLKELAKDL+NQR+ QK+N K K  +   +N 
Sbjct: 93   ARRRQRENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQ 152

Query: 4772 SERSDAVSATDNKE-------NLDEML-ASSIAAEANESLSKSASKSATVSXXXXXXXXX 4617
            S+ ++ V    N E        L E L   SIA +   +  +   +   +          
Sbjct: 153  SD-TNFVGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVI---------- 201

Query: 4616 XXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKKILSDDSDQSDNAGISSEKNDV 4437
                LP IDGN+DP VLA+LP SMQ QLL      +GKKIL +D +QS+     +E + +
Sbjct: 202  ---ILPDIDGNIDPDVLAALPQSMQRQLL-----KQGKKILLNDLNQSNKERSGTEHDAM 253

Query: 4436 VSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVD 4257
             S +Y  +KLDEMLAAS+A +ED++L N  +                 EMILPAM GNVD
Sbjct: 254  TSTSYSQEKLDEMLAASLATQEDSNLANAST--SVAAIPSEDDGDEDEEMILPAMHGNVD 311

Query: 4256 PAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREID 4077
            PAVLAALPPS+QLDLL QMRERLMAENRQKYQKVKKAPEKFSELQIQ+YLKTVAFRREID
Sbjct: 312  PAVLAALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREID 371

Query: 4076 EVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEH- 3900
            EVQ+AAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ LTS+R +  EDKQQ+  S+H 
Sbjct: 372  EVQRAAAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHP 431

Query: 3899 -SFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRA 3723
              FL SV +             KSN      P+ES    D+DV TY+D  GR+RVS+VR 
Sbjct: 432  SGFLGSVKSSC-----------KSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRG 480

Query: 3722 MGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHE 3543
            MGIRMTRDLQRNLD+MKE E ER N+NK  + +S+ + +K   SK+ +S+ + FVETSH+
Sbjct: 481  MGIRMTRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKS-VSNGNQFVETSHD 539

Query: 3542 DDSESVSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPA--DNS 3369
            D+ ESV++ E N+ + F   + +EI+FED+G+    DDD IFA L AG P   P+  + S
Sbjct: 540  DNGESVNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKS 599

Query: 3368 PRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAA 3189
             R     S SD +WEEG  E K + +    NA  +  L  ++ NI+D+SEVEWEE PS A
Sbjct: 600  LRKQPSGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLLNKESNITDDSEVEWEEEPSDA 657

Query: 3188 PKSSLLFPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IA 3018
            PKSS   P ES +++     EEE++LQEAIRRSL DV  EK N   S+  +SKNLGE + 
Sbjct: 658  PKSSS-GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLD 716

Query: 3017 HDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLK 2838
             D    H+K +     +    +A       CE++D   K  T    + SE  +S ES   
Sbjct: 717  EDFGSLHEKGDT--GASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESP-- 772

Query: 2837 LSVAHNPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDL--KGVHL 2664
             S  HN D    +++K  E S GS+SEQSRH              E++ F+    K V  
Sbjct: 773  -SPVHNSDKNMTILSKFSERSDGSHSEQSRH-------------NETAEFVATLEKEVDF 818

Query: 2663 VKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASD 2484
              G+ L  S + DG  T      +D S+S D   GD    IQ+D KK   E E S+L SD
Sbjct: 819  PTGKHLDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVD-KKTGSEDEPSNLVSD 877

Query: 2483 KKNEIEAVM-----KHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTH 2319
             K+ IEA +     K +F AKP+  ++   + SIP V+SS N  I +   EQ+L  + T+
Sbjct: 878  NKSSIEAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITY 937

Query: 2318 DTYIKDRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVS 2142
            +  +   + +T    IK N+N   + S+  L EE+LILDQEC N+ DEQ+KLERNAESVS
Sbjct: 938  ENCVNKAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVS 997

Query: 2141 SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNI 1962
            SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNI
Sbjct: 998  SEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNI 1057

Query: 1961 FDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEED 1782
            FDDRKYVETYFMQDIEKELGLTRE+L+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEED
Sbjct: 1058 FDDRKYVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEED 1117

Query: 1781 GLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNV------EGVSGFD 1620
            GL KFREWIESPDPTILGK +VQ G+S+ KR P++ + DVN  K +        G S  D
Sbjct: 1118 GLHKFREWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLD 1177

Query: 1619 ENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEP 1440
            +N  Q +++ QS + + ++K+IF DKHRNVSKNWHIPSSFPSEAVISAY  PQ+DKSTEP
Sbjct: 1178 QNSFQADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEP 1237

Query: 1439 FSWGKPDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIR 1260
            F+WG+PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EKRETQLR+EAFY+FNE+FAKIR
Sbjct: 1238 FTWGRPDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIR 1297

Query: 1259 SNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGA 1080
            S RIKKAVKGITG QS E +DD  Q+VSKS++KR  + ++SG+++S + S +  +  +  
Sbjct: 1298 SKRIKKAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRC 1357

Query: 1079 QS-NMEKSTPRQSRKRKVLEKFVPSEMENPE--RVALADSGANKVSHGRGSRRGKVQ-RV 912
            QS + +KS P+ SRKR+   K V  EM  PE     L     NK S G G  RG  + R 
Sbjct: 1358 QSKSTDKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRR 1417

Query: 911  GRGTPCAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVG 732
             +G+   +  ETSSS G  G+  QE   EKL  P+ VRRSM +R PVNY+V D E D+ G
Sbjct: 1418 RKGSSGFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKDLE-DEGG 1476

Query: 731  KIVNNKECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDK---DHIERGGGFCID 561
              +++KE S +   E+        +A  D   K Q  A +PS+D    D++E GGGFC+D
Sbjct: 1477 --LSHKESSGEDAMEK--------EAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMD 1526

Query: 560  D-------------------------------DGESGQPNVSPSDDPIFEAETSKDYLKM 474
            +                               +G+  QP+ S   +P  E  ++ DYLKM
Sbjct: 1527 ERGTDLPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKM 1586

Query: 473  GGGFCEDESET--REDQVAEQDPVISGEILSTCFDSLGGVDCDIGLGDSTSGSKEDI--K 306
            GGGFC +ESET    D    +DPV + E  S CF  +   D +I   + +  ++  +  K
Sbjct: 1587 GGGFCMEESETIGNPDAGNYEDPVQATE-SSNCFAFMDKADDNIDSAEPSVNAEGSLLDK 1645

Query: 305  GSESNWRTDTIDTELNLVHQSATSTDNVKNNA---DGSSGG-----ALTAMPFL 168
                    D  +  LNL H++A + D+ K +A   + S  G      L+AMP L
Sbjct: 1646 LQNGGKTPDEANDALNLNHRNAANKDDSKESASLPEASDVGTTFISGLSAMPSL 1699


>gb|KJB11471.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1635

 Score = 1459 bits (3776), Expect = 0.0
 Identities = 893/1698 (52%), Positives = 1108/1698 (65%), Gaps = 48/1698 (2%)
 Frame = -2

Query: 5117 MVQFMKAMRDEKGEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQ 4938
            MVQFMKAMRDEKGEM+RNAHL+GFFRRICKLLYLKTKPVFVFDG TP LKRRTVIARRRQ
Sbjct: 1    MVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVIARRRQ 60

Query: 4937 RENAQAKIRKTAEKLLINHLKTMRLKELAKDLENQRQTQKSNAKGKKILSDVENISERSD 4758
            RENAQAKIRKTAEKLL+N LK MRLKELAKDL+NQR+ QK+N K K  +   +N S+ ++
Sbjct: 61   RENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TN 119

Query: 4757 AVSATDNKE-------NLDEML-ASSIAAEANESLSKSASKSATVSXXXXXXXXXXXXXL 4602
             V    N E        L E L   SIA +   +  +   +   +              L
Sbjct: 120  FVGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVI-------------IL 166

Query: 4601 PTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNY 4422
            P IDGN+DP VLA+LP SMQ QLL      +GKKIL +D +QS+     +E + + S +Y
Sbjct: 167  PDIDGNIDPDVLAALPQSMQRQLL-----KQGKKILLNDLNQSNKERSGTEHDAMTSTSY 221

Query: 4421 DHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLA 4242
              +KLDEMLAAS+A +ED++L N  +                 EMILPAM GNVDPAVLA
Sbjct: 222  SQEKLDEMLAASLATQEDSNLANAST--SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLA 279

Query: 4241 ALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKA 4062
            ALPPS+QLDLL QMRERLMAENRQKYQKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+A
Sbjct: 280  ALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRA 339

Query: 4061 AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLD 3888
            AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ LTS+R +  EDKQQ+  S+H   FL 
Sbjct: 340  AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFLG 399

Query: 3887 SVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRM 3708
            SV +             KSN      P+ES    D+DV TY+D  GR+RVS+VR MGIRM
Sbjct: 400  SVKSSC-----------KSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRM 448

Query: 3707 TRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSES 3528
            TRDLQRNLD+MKE E ER N+NK  + +S+ + +K   SK+ +S+ + FVETSH+D+ ES
Sbjct: 449  TRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKS-VSNGNQFVETSHDDNGES 507

Query: 3527 VSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGS 3354
            V++ E N+ + F   + +EI+FED+G+    DDD IFA L AG P   P+  + S R   
Sbjct: 508  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 567

Query: 3353 CNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSL 3174
              S SD +WEEG  E K + +    NA  +  L  ++ NI+D+SEVEWEE PS APKSS 
Sbjct: 568  SGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS 625

Query: 3173 LFPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTW 3003
              P ES +++     EEE++LQEAIRRSL DV  EK N   S+  +SKNLGE +  D   
Sbjct: 626  -GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGS 684

Query: 3002 FHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAH 2823
             H+K +     +    +A       CE++D   K  T    + SE  +S ES    S  H
Sbjct: 685  LHEKGDT--GASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESP---SPVH 739

Query: 2822 NPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDL--KGVHLVKGQC 2649
            N D    +++K  E S GS+SEQSRH              E++ F+    K V    G+ 
Sbjct: 740  NSDKNMTILSKFSERSDGSHSEQSRH-------------NETAEFVATLEKEVDFPTGKH 786

Query: 2648 LSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEI 2469
            L  S + DG  T      +D S+S D   GD    IQ+D KK   E E S+L SD K+ I
Sbjct: 787  LDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSI 845

Query: 2468 EAVM-----KHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIK 2304
            EA +     K +F AKP+  ++   + SIP V+SS N  I +   EQ+L  + T++  + 
Sbjct: 846  EAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVN 905

Query: 2303 DRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVSSEMFA 2127
              + +T    IK N+N   + S+  L EE+LILDQEC N+ DEQ+KLERNAESVSSEMFA
Sbjct: 906  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 965

Query: 2126 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1947
            ECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRK
Sbjct: 966  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1025

Query: 1946 YVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKF 1767
            YVETYFMQDIEKELGLTRE+L+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KF
Sbjct: 1026 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKF 1085

Query: 1766 REWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNV------EGVSGFDENISQ 1605
            REWIESPDPTILGK +VQ G+S+ KR P++ + DVN  K +        G S  D+N  Q
Sbjct: 1086 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQ 1145

Query: 1604 FNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGK 1425
             +++ QS + + ++K+IF DKHRNVSKNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+
Sbjct: 1146 ADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGR 1205

Query: 1424 PDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIK 1245
            PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIK
Sbjct: 1206 PDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIK 1265

Query: 1244 KAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQS-NM 1068
            KAVKGITG QS E +DD  Q+VSKS++KR  + ++SG+++S + S +  +  +  QS + 
Sbjct: 1266 KAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKST 1325

Query: 1067 EKSTPRQSRKRKVLEKFVPSEMENPE--RVALADSGANKVSHGRGSRRGKVQ-RVGRGTP 897
            +KS P+ SRKR+   K V  EM  PE     L     NK S G G  RG  + R  +G+ 
Sbjct: 1326 DKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSS 1385

Query: 896  CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNN 717
              +  ETSSS G  G+  QE   EKL  P+ VRRSM +R PVNY+V D E D+ G  +++
Sbjct: 1386 GFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKDLE-DEGG--LSH 1442

Query: 716  KECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDK---DHIERGGGFCIDDDGES 546
            KE S +   E+        +A  D   K Q  A +PS+D    D++E GGGFC+D   E 
Sbjct: 1443 KESSGEDAMEK--------EAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMD---ER 1491

Query: 545  GQPNVSPSDDPIFEAETSKDYLKMGGGFCEDESET--REDQVAEQDPVISGEILSTCFDS 372
            G      + D   E E + DYLKMGGGFC +ESET    D    +DPV + E  S CF  
Sbjct: 1492 GTDLPDANQDVDLETEPTNDYLKMGGGFCMEESETIGNPDAGNYEDPVQATE-SSNCFAF 1550

Query: 371  LGGVDCDIGLGDSTSGSKEDI--KGSESNWRTDTIDTELNLVHQSATSTDNVKNNA---D 207
            +   D +I   + +  ++  +  K        D  +  LNL H++A + D+ K +A   +
Sbjct: 1551 MDKADDNIDSAEPSVNAEGSLLDKLQNGGKTPDEANDALNLNHRNAANKDDSKESASLPE 1610

Query: 206  GSSGG-----ALTAMPFL 168
             S  G      L+AMP L
Sbjct: 1611 ASDVGTTFISGLSAMPSL 1628


>gb|KJB11466.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1669

 Score = 1455 bits (3767), Expect = 0.0
 Identities = 894/1729 (51%), Positives = 1114/1729 (64%), Gaps = 79/1729 (4%)
 Frame = -2

Query: 5117 MVQFMKAMRDEKGEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQ 4938
            MVQFMKAMRDEKGEM+RNAHL+GFFRRICKLLYLKTKPVFVFDG TP LKRRTVIARRRQ
Sbjct: 1    MVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVIARRRQ 60

Query: 4937 RENAQAKIRKTAEKLLINHLKTMRLKELAKDLENQRQTQKSNAKGKKILSDVENISERSD 4758
            RENAQAKIRKTAEKLL+N LK MRLKELAKDL+NQR+ QK+N K K  +   +N S+ ++
Sbjct: 61   RENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TN 119

Query: 4757 AVSATDNKE-------NLDEML-ASSIAAEANESLSKSASKSATVSXXXXXXXXXXXXXL 4602
             V    N E        L E L   SIA +   +  +   +   +              L
Sbjct: 120  FVGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVI-------------IL 166

Query: 4601 PTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNY 4422
            P IDGN+DP VLA+LP SMQ QLL      +GKKIL +D +QS+     +E + + S +Y
Sbjct: 167  PDIDGNIDPDVLAALPQSMQRQLL-----KQGKKILLNDLNQSNKERSGTEHDAMTSTSY 221

Query: 4421 DHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLA 4242
              +KLDEMLAAS+A +ED++L N  +                 EMILPAM GNVDPAVLA
Sbjct: 222  SQEKLDEMLAASLATQEDSNLANAST--SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLA 279

Query: 4241 ALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKA 4062
            ALPPS+QLDLL QMRERLMAENRQKYQKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+A
Sbjct: 280  ALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRA 339

Query: 4061 AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLD 3888
            AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ LTS+R +  EDKQQ+  S+H   FL 
Sbjct: 340  AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFLG 399

Query: 3887 SVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRM 3708
            SV +             KSN      P+ES    D+DV TY+D  GR+RVS+VR MGIRM
Sbjct: 400  SVKSSC-----------KSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRM 448

Query: 3707 TRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSES 3528
            TRDLQRNLD+MKE E ER N+NK  + +S+ + +K   SK+ +S+ + FVETSH+D+ ES
Sbjct: 449  TRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKS-VSNGNQFVETSHDDNGES 507

Query: 3527 VSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGS 3354
            V++ E N+ + F   + +EI+FED+G+    DDD IFA L AG P   P+  + S R   
Sbjct: 508  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 567

Query: 3353 CNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSL 3174
              S SD +WEEG  E K + +    NA  +  L  ++ NI+D+SEVEWEE PS APKSS 
Sbjct: 568  SGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS 625

Query: 3173 LFPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTW 3003
              P ES +++     EEE++LQEAIRRSL DV  EK N   S+  +SKNLGE +  D   
Sbjct: 626  -GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGS 684

Query: 3002 FHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAH 2823
             H+K +     +    +A       CE++D   K  T    + SE  +S ES    S  H
Sbjct: 685  LHEKGDT--GASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESP---SPVH 739

Query: 2822 NPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDL--KGVHLVKGQC 2649
            N D    +++K  E S GS+SEQSRH              E++ F+    K V    G+ 
Sbjct: 740  NSDKNMTILSKFSERSDGSHSEQSRH-------------NETAEFVATLEKEVDFPTGKH 786

Query: 2648 LSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEI 2469
            L  S + DG  T      +D S+S D   GD    IQ+D KK   E E S+L SD K+ I
Sbjct: 787  LDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSI 845

Query: 2468 EAVM-----KHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIK 2304
            EA +     K +F AKP+  ++   + SIP V+SS N  I +   EQ+L  + T++  + 
Sbjct: 846  EAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVN 905

Query: 2303 DRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVSSEMFA 2127
              + +T    IK N+N   + S+  L EE+LILDQEC N+ DEQ+KLERNAESVSSEMFA
Sbjct: 906  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 965

Query: 2126 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1947
            ECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRK
Sbjct: 966  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1025

Query: 1946 YVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKF 1767
            YVETYFMQDIEKELGLTRE+L+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KF
Sbjct: 1026 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKF 1085

Query: 1766 REWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNV------EGVSGFDENISQ 1605
            REWIESPDPTILGK +VQ G+S+ KR P++ + DVN  K +        G S  D+N  Q
Sbjct: 1086 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQ 1145

Query: 1604 FNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGK 1425
             +++ QS + + ++K+IF DKHRNVSKNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+
Sbjct: 1146 ADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGR 1205

Query: 1424 PDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIK 1245
            PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIK
Sbjct: 1206 PDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIK 1265

Query: 1244 KAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQS-NM 1068
            KAVKGITG QS E +DD  Q+VSKS++KR  + ++SG+++S + S +  +  +  QS + 
Sbjct: 1266 KAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKST 1325

Query: 1067 EKSTPRQSRKRKVLEKFVPSEMENPE--RVALADSGANKVSHGRGSRRGKVQ-RVGRGTP 897
            +KS P+ SRKR+   K V  EM  PE     L     NK S G G  RG  + R  +G+ 
Sbjct: 1326 DKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSS 1385

Query: 896  CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNN 717
              +  ETSSS G  G+  QE   EKL  P+ VRRSM +R PVNY+V D E D+ G  +++
Sbjct: 1386 GFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKDLE-DEGG--LSH 1442

Query: 716  KECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDK---DHIERGGGFCIDD---- 558
            KE S +   E+        +A  D   K Q  A +PS+D    D++E GGGFC+D+    
Sbjct: 1443 KESSGEDAMEK--------EAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMDERGTD 1494

Query: 557  ---------------------------DGESGQPNVSPSDDPIFEAETSKDYLKMGGGFC 459
                                       +G+  QP+ S   +P  E  ++ DYLKMGGGFC
Sbjct: 1495 LPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFC 1554

Query: 458  EDESET--REDQVAEQDPVISGEILSTCFDSLGGVDCDIGLGDSTSGSKEDI--KGSESN 291
             +ESET    D    +DPV + E  S CF  +   D +I   + +  ++  +  K     
Sbjct: 1555 MEESETIGNPDAGNYEDPVQATE-SSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGG 1613

Query: 290  WRTDTIDTELNLVHQSATSTDNVKNNA---DGSSGG-----ALTAMPFL 168
               D  +  LNL H++A + D+ K +A   + S  G      L+AMP L
Sbjct: 1614 KTPDEANDALNLNHRNAANKDDSKESASLPEASDVGTTFISGLSAMPSL 1662


>gb|KJB11467.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1666

 Score = 1450 bits (3754), Expect = 0.0
 Identities = 892/1729 (51%), Positives = 1112/1729 (64%), Gaps = 79/1729 (4%)
 Frame = -2

Query: 5117 MVQFMKAMRDEKGEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQ 4938
            MVQFMKAMRDEKGEM+RNAHL+GFFRRICKLLYLKTKPVFVFDG TP LKRRTVIARRRQ
Sbjct: 1    MVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVIARRRQ 60

Query: 4937 RENAQAKIRKTAEKLLINHLKTMRLKELAKDLENQRQTQKSNAKGKKILSDVENISERSD 4758
            RENAQAKIRKTAEKLL+N LK MRLKELAKDL+NQR+ QK+N K K  +   +N S+ ++
Sbjct: 61   RENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TN 119

Query: 4757 AVSATDNKE-------NLDEML-ASSIAAEANESLSKSASKSATVSXXXXXXXXXXXXXL 4602
             V    N E        L E L   SIA +   +  +   +   +              L
Sbjct: 120  FVGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVI-------------IL 166

Query: 4601 PTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNY 4422
            P IDGN+DP VLA+LP SMQ QLL        K+IL +D +QS+     +E + + S +Y
Sbjct: 167  PDIDGNIDPDVLAALPQSMQRQLL--------KQILLNDLNQSNKERSGTEHDAMTSTSY 218

Query: 4421 DHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLA 4242
              +KLDEMLAAS+A +ED++L N  +                 EMILPAM GNVDPAVLA
Sbjct: 219  SQEKLDEMLAASLATQEDSNLANAST--SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLA 276

Query: 4241 ALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKA 4062
            ALPPS+QLDLL QMRERLMAENRQKYQKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+A
Sbjct: 277  ALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRA 336

Query: 4061 AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLD 3888
            AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ LTS+R +  EDKQQ+  S+H   FL 
Sbjct: 337  AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFLG 396

Query: 3887 SVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRM 3708
            SV +             KSN      P+ES    D+DV TY+D  GR+RVS+VR MGIRM
Sbjct: 397  SVKSSC-----------KSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRM 445

Query: 3707 TRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSES 3528
            TRDLQRNLD+MKE E ER N+NK  + +S+ + +K   SK+ +S+ + FVETSH+D+ ES
Sbjct: 446  TRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKS-VSNGNQFVETSHDDNGES 504

Query: 3527 VSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGS 3354
            V++ E N+ + F   + +EI+FED+G+    DDD IFA L AG P   P+  + S R   
Sbjct: 505  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 564

Query: 3353 CNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSL 3174
              S SD +WEEG  E K + +    NA  +  L  ++ NI+D+SEVEWEE PS APKSS 
Sbjct: 565  SGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS 622

Query: 3173 LFPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTW 3003
              P ES +++     EEE++LQEAIRRSL DV  EK N   S+  +SKNLGE +  D   
Sbjct: 623  -GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGS 681

Query: 3002 FHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAH 2823
             H+K +     +    +A       CE++D   K  T    + SE  +S ES    S  H
Sbjct: 682  LHEKGDT--GASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESP---SPVH 736

Query: 2822 NPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDL--KGVHLVKGQC 2649
            N D    +++K  E S GS+SEQSRH              E++ F+    K V    G+ 
Sbjct: 737  NSDKNMTILSKFSERSDGSHSEQSRH-------------NETAEFVATLEKEVDFPTGKH 783

Query: 2648 LSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEI 2469
            L  S + DG  T      +D S+S D   GD    IQ+D KK   E E S+L SD K+ I
Sbjct: 784  LDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSI 842

Query: 2468 EAVM-----KHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIK 2304
            EA +     K +F AKP+  ++   + SIP V+SS N  I +   EQ+L  + T++  + 
Sbjct: 843  EAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVN 902

Query: 2303 DRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVSSEMFA 2127
              + +T    IK N+N   + S+  L EE+LILDQEC N+ DEQ+KLERNAESVSSEMFA
Sbjct: 903  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 962

Query: 2126 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1947
            ECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRK
Sbjct: 963  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1022

Query: 1946 YVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKF 1767
            YVETYFMQDIEKELGLTRE+L+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KF
Sbjct: 1023 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKF 1082

Query: 1766 REWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNV------EGVSGFDENISQ 1605
            REWIESPDPTILGK +VQ G+S+ KR P++ + DVN  K +        G S  D+N  Q
Sbjct: 1083 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQ 1142

Query: 1604 FNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGK 1425
             +++ QS + + ++K+IF DKHRNVSKNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+
Sbjct: 1143 ADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGR 1202

Query: 1424 PDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIK 1245
            PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIK
Sbjct: 1203 PDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIK 1262

Query: 1244 KAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQS-NM 1068
            KAVKGITG QS E +DD  Q+VSKS++KR  + ++SG+++S + S +  +  +  QS + 
Sbjct: 1263 KAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKST 1322

Query: 1067 EKSTPRQSRKRKVLEKFVPSEMENPE--RVALADSGANKVSHGRGSRRGKVQ-RVGRGTP 897
            +KS P+ SRKR+   K V  EM  PE     L     NK S G G  RG  + R  +G+ 
Sbjct: 1323 DKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSS 1382

Query: 896  CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNN 717
              +  ETSSS G  G+  QE   EKL  P+ VRRSM +R PVNY+V D E D+ G  +++
Sbjct: 1383 GFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKDLE-DEGG--LSH 1439

Query: 716  KECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDK---DHIERGGGFCIDD---- 558
            KE S +   E+        +A  D   K Q  A +PS+D    D++E GGGFC+D+    
Sbjct: 1440 KESSGEDAMEK--------EAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMDERGTD 1491

Query: 557  ---------------------------DGESGQPNVSPSDDPIFEAETSKDYLKMGGGFC 459
                                       +G+  QP+ S   +P  E  ++ DYLKMGGGFC
Sbjct: 1492 LPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFC 1551

Query: 458  EDESET--REDQVAEQDPVISGEILSTCFDSLGGVDCDIGLGDSTSGSKEDI--KGSESN 291
             +ESET    D    +DPV + E  S CF  +   D +I   + +  ++  +  K     
Sbjct: 1552 MEESETIGNPDAGNYEDPVQATE-SSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGG 1610

Query: 290  WRTDTIDTELNLVHQSATSTDNVKNNA---DGSSGG-----ALTAMPFL 168
               D  +  LNL H++A + D+ K +A   + S  G      L+AMP L
Sbjct: 1611 KTPDEANDALNLNHRNAANKDDSKESASLPEASDVGTTFISGLSAMPSL 1659


>gb|KJB11465.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1667

 Score = 1450 bits (3753), Expect = 0.0
 Identities = 892/1729 (51%), Positives = 1112/1729 (64%), Gaps = 79/1729 (4%)
 Frame = -2

Query: 5117 MVQFMKAMRDEKGEMVRNAHLIGFFRRICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQ 4938
            MVQFMKAMRDEKGEM+RNAHL+GFFRRICKLLYLKTKPVFVFDG TP LKRRTVIARRRQ
Sbjct: 1    MVQFMKAMRDEKGEMIRNAHLLGFFRRICKLLYLKTKPVFVFDGATPILKRRTVIARRRQ 60

Query: 4937 RENAQAKIRKTAEKLLINHLKTMRLKELAKDLENQRQTQKSNAKGKKILSDVENISERSD 4758
            RENAQAKIRKTAEKLL+N LK MRLKELAKDL+NQR+ QK+N K K  +   +N S+ ++
Sbjct: 61   RENAQAKIRKTAEKLLLNQLKQMRLKELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TN 119

Query: 4757 AVSATDNKE-------NLDEML-ASSIAAEANESLSKSASKSATVSXXXXXXXXXXXXXL 4602
             V    N E        L E L   SIA +   +  +   +   +              L
Sbjct: 120  FVGCNANVELTKEGDVKLKEKLEVPSIAKDGGHNEDEDEDEDEVI-------------IL 166

Query: 4601 PTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNY 4422
            P IDGN+DP VLA+LP SMQ QLL +K       IL +D +QS+     +E + + S +Y
Sbjct: 167  PDIDGNIDPDVLAALPQSMQRQLLKQK-------ILLNDLNQSNKERSGTEHDAMTSTSY 219

Query: 4421 DHQKLDEMLAASIAAEEDASLTNNPSIXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLA 4242
              +KLDEMLAAS+A +ED++L N  +                 EMILPAM GNVDPAVLA
Sbjct: 220  SQEKLDEMLAASLATQEDSNLANAST--SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLA 277

Query: 4241 ALPPSMQLDLLVQMRERLMAENRQKYQKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKA 4062
            ALPPS+QLDLL QMRERLMAENRQKYQKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+A
Sbjct: 278  ALPPSLQLDLLGQMRERLMAENRQKYQKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRA 337

Query: 4061 AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLD 3888
            AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQ LTS+R +  EDKQQ+  S+H   FL 
Sbjct: 338  AAGRGVAGVQTSRIASEANREFIFSSSFTGDKQALTSARKEIDEDKQQERHSDHPSGFLG 397

Query: 3887 SVNNVASFDNSEAASIDKSNAVTRLAPEESRKGFDDDVETYLDERGRVRVSKVRAMGIRM 3708
            SV +             KSN      P+ES    D+DV TY+D  GR+RVS+VR MGIRM
Sbjct: 398  SVKSSC-----------KSNVAAESVPDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRM 446

Query: 3707 TRDLQRNLDMMKEFEHERPNVNKITDAESMLNLNKTGTSKTFLSSKSDFVETSHEDDSES 3528
            TRDLQRNLD+MKE E ER N+NK  + +S+ + +K   SK+ +S+ + FVETSH+D+ ES
Sbjct: 447  TRDLQRNLDLMKEIEKERTNLNKGVNVKSVPDKSKIDASKS-VSNGNQFVETSHDDNGES 505

Query: 3527 VSLIERNKHAMFNNGNSVEISFEDNGEKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGS 3354
            V++ E N+ + F   + +EI+FED+G+    DDD IFA L AG P   P+  + S R   
Sbjct: 506  VNVNESNQQSAFETESCMEITFEDDGKTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQP 565

Query: 3353 CNSISDSDWEEGTTERKGNSLPDDANAGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSL 3174
              S SD +WEEG  E K + +    NA  +  L  ++ NI+D+SEVEWEE PS APKSS 
Sbjct: 566  SGSDSDFEWEEGVVEGKWDGVTPGMNA--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS 623

Query: 3173 LFPTESVKIVCN--MEEEANLQEAIRRSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTW 3003
              P ES +++     EEE++LQEAIRRSL DV  EK N   S+  +SKNLGE +  D   
Sbjct: 624  -GPVESGRMLSKGYWEEESDLQEAIRRSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGS 682

Query: 3002 FHDKENNQDDQNLLGKNAPKKNELFCEHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAH 2823
             H+K +     +    +A       CE++D   K  T    + SE  +S ES    S  H
Sbjct: 683  LHEKGDT--GASSFPGDAVNWQNKSCENLDRPRKPCTVNEPSISETFNSPESP---SPVH 737

Query: 2822 NPDNKEILINKSCENSTGSYSEQSRHASDGGALCRDALCEESSTFMDL--KGVHLVKGQC 2649
            N D    +++K  E S GS+SEQSRH              E++ F+    K V    G+ 
Sbjct: 738  NSDKNMTILSKFSERSDGSHSEQSRH-------------NETAEFVATLEKEVDFPTGKH 784

Query: 2648 LSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEI 2469
            L  S + DG  T      +D S+S D   GD    IQ+D KK   E E S+L SD K+ I
Sbjct: 785  LDVSKEVDGLSTISDSWFKDNSHSFDAAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSI 843

Query: 2468 EAVM-----KHNFIAKPTCHTIGICDPSIPMVESSGNASIYNSVTEQKLDAERTHDTYIK 2304
            EA +     K +F AKP+  ++   + SIP V+SS N  I +   EQ+L  + T++  + 
Sbjct: 844  EAEILDQDKKIDFEAKPSQQSVDTVNLSIPTVQSSANKVISDLHIEQELSGDITYENCVN 903

Query: 2303 DRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRNLGDEQKKLERNAESVSSEMFA 2127
              + +T    IK N+N   + S+  L EE+LILDQEC N+ DEQ+KLERNAESVSSEMFA
Sbjct: 904  KAEQHTDMSTIKGNDNEEIKFSKASLDEELLILDQECINMVDEQRKLERNAESVSSEMFA 963

Query: 2126 ECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1947
            ECQELLQMFGLPYIIAPMEAEAQCAYMEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRK
Sbjct: 964  ECQELLQMFGLPYIIAPMEAEAQCAYMELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRK 1023

Query: 1946 YVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKF 1767
            YVETYFMQDIEKELGLTRE+L+RMALLLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KF
Sbjct: 1024 YVETYFMQDIEKELGLTREKLMRMALLLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKF 1083

Query: 1766 REWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAKNNV------EGVSGFDENISQ 1605
            REWIESPDPTILGK +VQ G+S+ KR P++ + DVN  K +        G S  D+N  Q
Sbjct: 1084 REWIESPDPTILGKLNVQEGSSARKRGPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQ 1143

Query: 1604 FNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGK 1425
             +++ QS + + ++K+IF DKHRNVSKNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+
Sbjct: 1144 ADKNMQSTDCTDDIKQIFMDKHRNVSKNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGR 1203

Query: 1424 PDLFVLRKFCWDKFGWGSDKSNELLVPVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIK 1245
            PDLFVLRK CW+KFGWGS KS+ELL+PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIK
Sbjct: 1204 PDLFVLRKLCWEKFGWGSQKSDELLLPVLRESEKRETQLRMEAFYTFNERFAKIRSKRIK 1263

Query: 1244 KAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNNRSHKASKEMNESVTGAQS-NM 1068
            KAVKGITG QS E +DD  Q+VSKS++KR  + ++SG+++S + S +  +  +  QS + 
Sbjct: 1264 KAVKGITGNQSSELIDDGMQQVSKSRRKRRASPVQSGDDKSGEPSNKKEDIASRCQSKST 1323

Query: 1067 EKSTPRQSRKRKVLEKFVPSEMENPE--RVALADSGANKVSHGRGSRRGKVQ-RVGRGTP 897
            +KS P+ SRKR+   K V  EM  PE     L     NK S G G  RG  + R  +G+ 
Sbjct: 1324 DKSVPKTSRKRQSSGKDVSFEMRTPEPQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSS 1383

Query: 896  CAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRSMRSRKPVNYSVDDPEVDDVGKIVNN 717
              +  ETSSS G  G+  QE   EKL  P+ VRRSM +R PVNY+V D E D+ G  +++
Sbjct: 1384 GFQQFETSSSGGDSGNVNQEVDGEKLDQPREVRRSMHTRNPVNYTVKDLE-DEGG--LSH 1440

Query: 716  KECSNKGVAEQDWVHGVRGDASADCSRKKQLRAGDPSIDK---DHIERGGGFCIDD---- 558
            KE S +   E+        +A  D   K Q  A +PS+D    D++E GGGFC+D+    
Sbjct: 1441 KESSGEDAMEK--------EAGEDVKEKIQCEAREPSLDNIYGDYLETGGGFCMDERGTD 1492

Query: 557  ---------------------------DGESGQPNVSPSDDPIFEAETSKDYLKMGGGFC 459
                                       +G+  QP+ S   +P  E  ++ DYLKMGGGFC
Sbjct: 1493 LPDANQDVDLETEPTNDYLKMGGGFYMEGDIDQPDTSQDVNPFSETGSANDYLKMGGGFC 1552

Query: 458  EDESET--REDQVAEQDPVISGEILSTCFDSLGGVDCDIGLGDSTSGSKEDI--KGSESN 291
             +ESET    D    +DPV + E  S CF  +   D +I   + +  ++  +  K     
Sbjct: 1553 MEESETIGNPDAGNYEDPVQATE-SSNCFAFMDKADDNIDSAEPSVNAEGSLLDKLQNGG 1611

Query: 290  WRTDTIDTELNLVHQSATSTDNVKNNA---DGSSGG-----ALTAMPFL 168
               D  +  LNL H++A + D+ K +A   + S  G      L+AMP L
Sbjct: 1612 KTPDEANDALNLNHRNAANKDDSKESASLPEASDVGTTFISGLSAMPSL 1660


>ref|XP_002517370.1| DNA-repair protein UVH3, putative [Ricinus communis]
            gi|223543381|gb|EEF44912.1| DNA-repair protein UVH3,
            putative [Ricinus communis]
          Length = 1641

 Score = 1439 bits (3725), Expect = 0.0
 Identities = 899/1725 (52%), Positives = 1104/1725 (64%), Gaps = 41/1725 (2%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIW+VQFMKAMR+EKGEMVRNAHL+GFFR
Sbjct: 1    MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWIVQFMKAMRNEKGEMVRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYL+TKPVFVFDG TPALKRRTVIARRRQRE+AQAKIRKTAEKLL+NHLK+MRLK
Sbjct: 61   RICKLLYLRTKPVFVFDGATPALKRRTVIARRRQRESAQAKIRKTAEKLLLNHLKSMRLK 120

Query: 4859 ELAKDLENQRQTQK-SNAKGKKILSDVENISERSDAVSATDNKENLDEMLASSIAAEANE 4683
            ELAKDLENQR+ QK  +AKGKKIL +   I    + V   D +E LDEMLA+SIAAE   
Sbjct: 121  ELAKDLENQRRKQKIDDAKGKKILLEESKIENNDEDVENYD-QEILDEMLAASIAAEDER 179

Query: 4682 SLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVRKNDAKGK 4503
              S +AS SA                  T +GNV                         K
Sbjct: 180  RFSNTASASAVQDPENEDH---------TSNGNV-------------------------K 205

Query: 4502 KILSD--DSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPSIXXXX 4329
            ++L D  D +++D      E++DVV+++Y+ +KLDEMLAASIAAEED    N  S     
Sbjct: 206  EVLIDLIDMERTD-----LERDDVVAESYNQEKLDEMLAASIAAEEDVISINTASTSAAA 260

Query: 4328 XXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKYQKVKK 4149
                        EMILP + G VDP VLAALPPSMQLDLLVQMRERL+AENRQKYQKVKK
Sbjct: 261  IPSEEEGNDEVEEMILPEICGKVDPTVLAALPPSMQLDLLVQMRERLIAENRQKYQKVKK 320

Query: 4148 APEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSSSFTGD 3969
            APEKFSELQI+AYLKTVAFRREID VQKAAAG GV GVQ+SRIASEANREFIFSSSFTGD
Sbjct: 321  APEKFSELQIEAYLKTVAFRREIDHVQKAAAGNGVGGVQSSRIASEANREFIFSSSFTGD 380

Query: 3968 KQVLTSSRVKDKEDKQQQTPSEHSFLDSVNNVASFDNSEAASIDKSNAVTRLAPEESRKG 3789
            KQ+LTS+ V+   +KQQQ P+ +   DS+N V         S  KSNAV+    +E R+ 
Sbjct: 381  KQLLTSTGVQRNGNKQQQAPTMNPTFDSMNCV--------TSTSKSNAVSGSVQDEPRRV 432

Query: 3788 FDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITDAESMLNL 3609
            FD+DVETYLDE GR+RVS+VRAMG+RMTRDLQRNLD+MKE E ER +  +   ++S L  
Sbjct: 433  FDEDVETYLDENGRIRVSRVRAMGMRMTRDLQRNLDLMKEIEQERTHAIETAPSQSELTR 492

Query: 3608 NKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNG-EKSRDD 3432
            +K G+ K+F  SK   VE+SH+  S+SV L ERN+ +M N+  S++ISFE +G  K  D 
Sbjct: 493  DKIGSPKSF-PSKKLHVESSHDKHSDSVKLNERNQQSMLNDEGSIQISFEADGRSKCLDS 551

Query: 3431 DDVIFAHLVAGNPFIFPA-DN-SPRGGSCNSISDSDWEEGTTERKGNSLPDDANAGIKPP 3258
            DD +F  LVAG P   P+ DN + R  + +S SD DWEEGT E +GNS  ++      PP
Sbjct: 552  DDDVFTSLVAGQPVNIPSVDNITSRIQTSDSASDGDWEEGTIETRGNSSSNNLALETNPP 611

Query: 3257 LNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQEAIRRSLLDV 3084
              L++ NISD+SEVEWE+G      SS  FP+ES        MEEEA+LQEAIRRSL D+
Sbjct: 612  --LKEKNISDDSEVEWEDGGGDHENSS--FPSESKMPASRGYMEEEADLQEAIRRSLEDL 667

Query: 3083 CGEKQNYVSSEHGKSKNLGEIAHDGTWFHDKENNQDDQNLLGKNAPKKNELFCEHVDGLE 2904
             GE  N   SEH K K   +  +    F D+E+N     L  K+  ++++ F E +    
Sbjct: 668  GGEIFNNTLSEHEKLKISDKNVYKDVGFLDQEDNTGGLILPEKDVTQQDQPFSE-ISATG 726

Query: 2903 KLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQ-SRHASDGGA 2727
            K+   G  + S++  S +SQL  S AH+PDN +IL NK  E   GS   Q SR  +  G+
Sbjct: 727  KIDKVGQYDISQVFSS-QSQLAFSEAHDPDNMDILTNKLYERDMGSNDGQPSRALNMEGS 785

Query: 2726 LCRDALCEESSTFMDLKGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGDVIFGDSSY 2547
            +CR     ES+  ++    H++  Q  S ++  D   +   K     SN     + + S+
Sbjct: 786  VCRGMSSAESAAPLE---THVILKQ-FSETNVEDMGLSTSTKMRSGISNISKAAWSNVSF 841

Query: 2546 AIQIDGKKIDCEAEISDLASDKKNEIEAVMKHNFIAKPTCHTIGICDPSIPMVESSGNAS 2367
            A  ID  +   EAE S L +++K             +  C ++ I +PS  ++E S N +
Sbjct: 842  ASSIDDDRNKVEAEPSVLVNEEKR-----------PETYCQSVKITNPSTSVMEPSINLA 890

Query: 2366 IYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL-EEMLILDQECRN 2190
            I   V E KL  E+       ++K +  K  +  NEN+  + SE  L EE+LIL QE  N
Sbjct: 891  IGTDV-ESKLAGEKNSGHLFNEKKQDMEK--VVSNENLREDFSEVTLQEEILILGQERMN 947

Query: 2189 LGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 2010
            LG EQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD
Sbjct: 948  LGSEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAYMELANLVDGVVTD 1007

Query: 2009 DSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMALLLGSDYTEGISGI 1830
            DSDVFLFGAR+VYKNIFDDRKYVETYFM+DIE+ELGLTRE+LIRMALLLGSDYTEGISGI
Sbjct: 1008 DSDVFLFGARNVYKNIFDDRKYVETYFMKDIERELGLTREKLIRMALLLGSDYTEGISGI 1067

Query: 1829 GIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKRCPRNGDNDVNVAK 1650
            GIVNAIEVVNAFPEEDGL KFREWI SPDPTILGK DV+ G S      R G++D   A 
Sbjct: 1068 GIVNAIEVVNAFPEEDGLEKFREWIYSPDPTILGKLDVRDGRSMR----RKGESD--SAN 1121

Query: 1649 NNVEGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVSKNWHIPSSFPSEAVISAYF 1470
            NNV  V  F + +S+ ++++ SA+++Q +++IF DKHRNVSKNWH+PSSFPSEAVISAY 
Sbjct: 1122 NNV--VDSFGKKVSESHKEEDSADHTQEIRQIFMDKHRNVSKNWHVPSSFPSEAVISAYM 1179

Query: 1469 CPQLDKSTEPFSWGKPDLFVLRK------FCWDKFGWGSDKSNELLVPVLKEYEKRETQL 1308
             PQ+DKSTEPF+WGKPDL VLR+       CW+KF WG  KS+ELL+PVLKEY K ETQL
Sbjct: 1180 SPQVDKSTEPFTWGKPDLHVLRRQVMIFIICWEKFAWGVQKSDELLLPVLKEYNKHETQL 1239

Query: 1307 RLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSKKKRGKNVLESGNN 1128
            RLEAFY+FNE+FAKIRS RIKKA+KGITG QS E MDD  ++ SKS+KKR     ES ++
Sbjct: 1240 RLEAFYTFNERFAKIRSRRIKKALKGITGYQSSEMMDDDVKDSSKSRKKRTIGPGESVDS 1299

Query: 1127 RSHKASKEMNESV-TGAQSNMEKSTPRQSRKRKVLEKFVPSEMENPERVALAD----SGA 963
                A K   E + +    ++EKST ++SRKR   +  V +E ENP +   A+    +  
Sbjct: 1300 EPDAALKREREGLFSDKTDSLEKSTTKRSRKRTAGQP-VLTERENPGQHLQAEGRRKTHK 1358

Query: 962  NKVSHGRGSRRGKVQRVGRGT---PCAELSETSSSDGIGGDDAQEYYDEKLKGPQAVRRS 792
             +   GRG  RG+ +  GRG       ELS++S     G DD  E   EK +GPQ +RRS
Sbjct: 1359 GQCGDGRGKGRGRGRGRGRGRGKGSGIELSDSSYDYVSGDDDELEVRIEKSEGPQELRRS 1418

Query: 791  MRSRKPVNYSVDDPEVDDVGKIVNNKECSNKGVAEQD--WVHGVRGDASADCSRKKQLRA 618
             RSRKP NY++D  +VD    +    + SN+  AE D   V G   DAS+  + K+Q + 
Sbjct: 1419 TRSRKPANYTLDGFKVDVDSAVDRGDKQSNESAAELDLFGVIGKSTDASSCLNGKEQHKV 1478

Query: 617  GD---PSIDKDHIERGGGFCIDDDGESGQPNVSPSDDPIFEAETSKDYLKMGGGFCEDES 447
             D       KD++E G     DD+G   +P           A  SKDYLKMGGGFC DES
Sbjct: 1479 EDALPEDFSKDYLENGQHCLTDDNG--SEPKYPGG------ASVSKDYLKMGGGFCMDES 1530

Query: 446  ETREDQVAEQDPVISG----EILSTCFDSLGGVDCDIGLGDSTSGSKEDIKGSESNWRTD 279
            ET  DQ A   P +         S    S+   D   GL       K  +   +   +T+
Sbjct: 1531 ETCTDQDAAHSPSMPAFEEMADASNVSGSMEETDRGEGLLPLVCSIKRTLNDMQDGGKTN 1590

Query: 278  TIDTE--------LNLVHQSATSTDNVKNNADGSSGGALTAMPFL 168
              D E         ++   S  S    +     +    L+AMPFL
Sbjct: 1591 AHDAEPSTDCLNATDIGDHSEASLCLPETTGSKTIAPTLSAMPFL 1635


>gb|KJB11468.1| hypothetical protein B456_001G260400 [Gossypium raimondii]
          Length = 1470

 Score = 1430 bits (3701), Expect = 0.0
 Identities = 846/1508 (56%), Positives = 1029/1508 (68%), Gaps = 33/1508 (2%)
 Frame = -2

Query: 5219 MGVQGLWDLLAPVGRRVSVETLSGKKLAIDASIWMVQFMKAMRDEKGEMVRNAHLIGFFR 5040
            MGV GLW+LLAPVGRRVSVETL+GKKLAIDASIWMVQFMKAMRDEKGEM+RNAHL+GFFR
Sbjct: 1    MGVHGLWELLAPVGRRVSVETLAGKKLAIDASIWMVQFMKAMRDEKGEMIRNAHLLGFFR 60

Query: 5039 RICKLLYLKTKPVFVFDGGTPALKRRTVIARRRQRENAQAKIRKTAEKLLINHLKTMRLK 4860
            RICKLLYLKTKPVFVFDG TP LKRRTVIARRRQRENAQAKIRKTAEKLL+N LK MRLK
Sbjct: 61   RICKLLYLKTKPVFVFDGATPILKRRTVIARRRQRENAQAKIRKTAEKLLLNQLKQMRLK 120

Query: 4859 ELAKDLENQRQTQKSNAKGKKILSDVENISERSDAVSATDNKE-------NLDEML-ASS 4704
            ELAKDL+NQR+ QK+N K K  +   +N S+ ++ V    N E        L E L   S
Sbjct: 121  ELAKDLDNQRKMQKNNNKDKGKMVSSDNQSD-TNFVGCNANVELTKEGDVKLKEKLEVPS 179

Query: 4703 IAAEANESLSKSASKSATVSXXXXXXXXXXXXXLPTIDGNVDPAVLASLPPSMQHQLLVR 4524
            IA +   +  +   +   +              LP IDGN+DP VLA+LP SMQ QLL  
Sbjct: 180  IAKDGGHNEDEDEDEDEVI-------------ILPDIDGNIDPDVLAALPQSMQRQLL-- 224

Query: 4523 KNDAKGKKILSDDSDQSDNAGISSEKNDVVSKNYDHQKLDEMLAASIAAEEDASLTNNPS 4344
                +GKKIL +D +QS+     +E + + S +Y  +KLDEMLAAS+A +ED++L N  +
Sbjct: 225  ---KQGKKILLNDLNQSNKERSGTEHDAMTSTSYSQEKLDEMLAASLATQEDSNLANAST 281

Query: 4343 IXXXXXXXXXXXXXXXXEMILPAMTGNVDPAVLAALPPSMQLDLLVQMRERLMAENRQKY 4164
                             EMILPAM GNVDPAVLAALPPS+QLDLL QMRERLMAENRQKY
Sbjct: 282  --SVAAIPSEDDGDEDEEMILPAMHGNVDPAVLAALPPSLQLDLLGQMRERLMAENRQKY 339

Query: 4163 QKVKKAPEKFSELQIQAYLKTVAFRREIDEVQKAAAGRGVAGVQTSRIASEANREFIFSS 3984
            QKVKKAPEKFSELQIQ+YLKTVAFRREIDEVQ+AAAGRGVAGVQTSRIASEANREFIFSS
Sbjct: 340  QKVKKAPEKFSELQIQSYLKTVAFRREIDEVQRAAAGRGVAGVQTSRIASEANREFIFSS 399

Query: 3983 SFTGDKQVLTSSRVKDKEDKQQQTPSEH--SFLDSVNNVASFDNSEAASIDKSNAVTRLA 3810
            SFTGDKQ LTS+R +  EDKQQ+  S+H   FL SV +             KSN      
Sbjct: 400  SFTGDKQALTSARKEIDEDKQQERHSDHPSGFLGSVKSSC-----------KSNVAAESV 448

Query: 3809 PEESRKGFDDDVETYLDERGRVRVSKVRAMGIRMTRDLQRNLDMMKEFEHERPNVNKITD 3630
            P+ES    D+DV TY+D  GR+RVS+VR MGIRMTRDLQRNLD+MKE E ER N+NK  +
Sbjct: 449  PDESTSAPDEDVGTYVDATGRIRVSRVRGMGIRMTRDLQRNLDLMKEIEKERTNLNKGVN 508

Query: 3629 AESMLNLNKTGTSKTFLSSKSDFVETSHEDDSESVSLIERNKHAMFNNGNSVEISFEDNG 3450
             +S+ + +K   SK+ +S+ + FVETSH+D+ ESV++ E N+ + F   + +EI+FED+G
Sbjct: 509  VKSVPDKSKIDASKS-VSNGNQFVETSHDDNGESVNVNESNQQSAFETESCMEITFEDDG 567

Query: 3449 EKSRDDDDVIFAHLVAGNPFIFPA--DNSPRGGSCNSISDSDWEEGTTERKGNSLPDDAN 3276
            +    DDD IFA L AG P   P+  + S R     S SD +WEEG  E K + +    N
Sbjct: 568  KTEYFDDDDIFARLAAGEPVTLPSPEEKSLRKQPSGSDSDFEWEEGVVEGKWDGVTPGMN 627

Query: 3275 AGIKPPLNLEDGNISDESEVEWEEGPSAAPKSSLLFPTESVKIVCN--MEEEANLQEAIR 3102
            A  +  L  ++ NI+D+SEVEWEE PS APKSS   P ES +++     EEE++LQEAIR
Sbjct: 628  A--EHNLLNKESNITDDSEVEWEEEPSDAPKSSS-GPVESGRMLSKGYWEEESDLQEAIR 684

Query: 3101 RSLLDVCGEKQNYVSSEHGKSKNLGE-IAHDGTWFHDKENNQDDQNLLGKNAPKKNELFC 2925
            RSL DV  EK N   S+  +SKNLGE +  D    H+K +     +    +A       C
Sbjct: 685  RSLTDVGVEKSNSFPSDVIESKNLGENLDEDFGSLHEKGDT--GASSFPGDAVNWQNKSC 742

Query: 2924 EHVDGLEKLVTDGGVNNSEMIDSLESQLKLSVAHNPDNKEILINKSCENSTGSYSEQSRH 2745
            E++D   K  T    + SE  +S ES    S  HN D    +++K  E S GS+SEQSRH
Sbjct: 743  ENLDRPRKPCTVNEPSISETFNSPESP---SPVHNSDKNMTILSKFSERSDGSHSEQSRH 799

Query: 2744 ASDGGALCRDALCEESSTFMDL--KGVHLVKGQCLSASDKGDGHRTHDKKCSEDRSNSGD 2571
                          E++ F+    K V    G+ L  S + DG  T      +D S+S D
Sbjct: 800  -------------NETAEFVATLEKEVDFPTGKHLDVSKEVDGLSTISDSWFKDNSHSFD 846

Query: 2570 VIFGDSSYAIQIDGKKIDCEAEISDLASDKKNEIEAVM-----KHNFIAKPTCHTIGICD 2406
               GD    IQ+D KK   E E S+L SD K+ IEA +     K +F AKP+  ++   +
Sbjct: 847  AAHGDIPDTIQVD-KKTGSEDEPSNLVSDNKSSIEAEILDQDKKIDFEAKPSQQSVDTVN 905

Query: 2405 PSIPMVESSGNASIYNSVTEQKLDAERTHDTYIKDRKLNTGKYAIKVNENVHAEASEKIL 2226
             SIP V+SS N  I +   EQ+L  + T++  +   + +T    IK N+N   + S+  L
Sbjct: 906  LSIPTVQSSANKVISDLHIEQELSGDITYENCVNKAEQHTDMSTIKGNDNEEIKFSKASL 965

Query: 2225 -EEMLILDQECRNLGDEQKKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 2049
             EE+LILDQEC N+ DEQ+KLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY
Sbjct: 966  DEELLILDQECINMVDEQRKLERNAESVSSEMFAECQELLQMFGLPYIIAPMEAEAQCAY 1025

Query: 2048 MELANLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREELIRMAL 1869
            MEL NLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTRE+L+RMAL
Sbjct: 1026 MELTNLVDGVVTDDSDVFLFGARSVYKNIFDDRKYVETYFMQDIEKELGLTREKLMRMAL 1085

Query: 1868 LLGSDYTEGISGIGIVNAIEVVNAFPEEDGLLKFREWIESPDPTILGKFDVQTGASSMKR 1689
            LLGSDYTEG+SGIGIVNAIEVVNAFPEEDGL KFREWIESPDPTILGK +VQ G+S+ KR
Sbjct: 1086 LLGSDYTEGVSGIGIVNAIEVVNAFPEEDGLHKFREWIESPDPTILGKLNVQEGSSARKR 1145

Query: 1688 CPRNGDNDVNVAKNNV------EGVSGFDENISQFNEDKQSANYSQNMKKIFTDKHRNVS 1527
             P++ + DVN  K +        G S  D+N  Q +++ QS + + ++K+IF DKHRNVS
Sbjct: 1146 GPKSTEKDVNGTKTSTRGSESNNGTSSLDQNSFQADKNMQSTDCTDDIKQIFMDKHRNVS 1205

Query: 1526 KNWHIPSSFPSEAVISAYFCPQLDKSTEPFSWGKPDLFVLRKFCWDKFGWGSDKSNELLV 1347
            KNWHIPSSFPSEAVISAY  PQ+DKSTEPF+WG+PDLFVLRK CW+KFGWGS KS+ELL+
Sbjct: 1206 KNWHIPSSFPSEAVISAYSLPQVDKSTEPFTWGRPDLFVLRKLCWEKFGWGSQKSDELLL 1265

Query: 1346 PVLKEYEKRETQLRLEAFYSFNEKFAKIRSNRIKKAVKGITGKQSLESMDDAGQEVSKSK 1167
            PVL+E EKRETQLR+EAFY+FNE+FAKIRS RIKKAVKGITG QS E +DD  Q+VSKS+
Sbjct: 1266 PVLRESEKRETQLRMEAFYTFNERFAKIRSKRIKKAVKGITGNQSSELIDDGMQQVSKSR 1325

Query: 1166 KKRGKNVLESGNNRSHKASKEMNESVTGAQS-NMEKSTPRQSRKRKVLEKFVPSEMENPE 990
            +KR  + ++SG+++S + S +  +  +  QS + +KS P+ SRKR+   K V  EM  PE
Sbjct: 1326 RKRRASPVQSGDDKSGEPSNKKEDIASRCQSKSTDKSVPKTSRKRQSSGKDVSFEMRTPE 1385

Query: 989  --RVALADSGANKVSHGRGSRRGKVQ-RVGRGTPCAELSETSSSDGIGGDDAQEYYDEKL 819
                 L     NK S G G  RG  + R  +G+   +  ETSSS G  G+  QE   EKL
Sbjct: 1386 PQLQTLRRRETNKQSAGNGRGRGGGEGRRRKGSSGFQQFETSSSGGDSGNVNQEVDGEKL 1445

Query: 818  KGPQAVRR 795
              P+ VRR
Sbjct: 1446 DQPREVRR 1453