BLASTX nr result
ID: Zanthoxylum22_contig00005669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00005669
(1156 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 268 7e-96
ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citr... 267 4e-94
gb|KDO81066.1| hypothetical protein CISIN_1g021890mg [Citrus sin... 265 1e-93
ref|XP_006433911.1| hypothetical protein CICLE_v10001605mg [Citr... 233 7e-84
gb|KDO81067.1| hypothetical protein CISIN_1g021890mg [Citrus sin... 231 3e-83
ref|XP_012067930.1| PREDICTED: 29 kDa ribonucleoprotein, chlorop... 202 1e-56
gb|KHF99254.1| 29 kDa ribonucleoprotein B, chloroplastic [Gossyp... 216 1e-55
ref|XP_007018692.1| RNA-binding family protein, putative [Theobr... 219 3e-55
ref|XP_010530167.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 216 1e-54
ref|XP_012466735.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 218 8e-54
ref|XP_010026026.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor... 213 2e-52
ref|XP_002306558.1| RNA recognition motif-containing family prot... 198 2e-52
ref|XP_008466190.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 207 2e-52
ref|XP_004136268.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 202 2e-52
ref|XP_011012428.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 199 6e-52
ref|XP_010101007.1| 28 kDa ribonucleoprotein [Morus notabilis] g... 206 4e-50
ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Caps... 204 9e-50
ref|XP_002285735.1| PREDICTED: 28 kDa ribonucleoprotein, chlorop... 201 1e-49
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera] 201 1e-49
ref|XP_013656115.1| PREDICTED: RNA-binding protein CP33, chlorop... 203 2e-49
>ref|XP_006472543.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Citrus
sinensis]
Length = 306
Score = 268 bits (685), Expect(2) = 7e-96
Identities = 138/186 (74%), Positives = 146/186 (78%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL+AQNVPWTSTHEDIRALFEQHGTVLD+ELSMH KNRNRGLAFVTMG
Sbjct: 99 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAAL 158
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR VQ KP PTFNLFIANLSFEARAKDLREF ISE
Sbjct: 159 NNLESYEFEGRTLKVNYAKVKKKNPAPPVQPKPFPTFNLFIANLSFEARAKDLREFFISE 218
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
GWD+VSAEVIFHD P++S+GYGFVSFKSK+VAE AISAFQGKLFMGR LRV P RQF +L
Sbjct: 219 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKLFMGRPLRVAPSRQFARL 278
Query: 321 QTKEGL 304
QTKEGL
Sbjct: 279 QTKEGL 284
Score = 112 bits (279), Expect(2) = 7e-96
Identities = 61/103 (59%), Positives = 68/103 (66%), Gaps = 4/103 (3%)
Frame = -3
Query: 1154 LHCCFPSTSYLYTEPXXXXXXQFHGALFVSL----HNQHNSYYFPISLSPPQSHAYTFPI 987
L+CCFPSTSYLYTEP HGA FVSL QH +Y+FP+S SP HAYTFPI
Sbjct: 6 LYCCFPSTSYLYTEPQQQQS---HGAPFVSLPQKQQKQHYNYFFPLSSSP--FHAYTFPI 60
Query: 986 RPKKVSPFVFHFSATTQDPXXXXXXXXSANTEQHKKNKKKNIL 858
PKKVSPFVFHFSATTQDP +ANTEQ ++ K L
Sbjct: 61 TPKKVSPFVFHFSATTQDPFVDSSSAAAANTEQREEEYSKTRL 103
>ref|XP_006433910.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536032|gb|ESR47150.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 363
Score = 267 bits (682), Expect(2) = 4e-94
Identities = 139/186 (74%), Positives = 146/186 (78%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL+AQNVPWTSTHEDIRALFEQHGTVLDVELSMH KNRNRGLAFVTMG
Sbjct: 156 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAAL 215
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR VQ KP TFNLFIANLSFEARAKDLREF ISE
Sbjct: 216 NNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISE 275
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
GWD+VSAEVIFHD P++S+GYGFVSFKSK+VAEAAISAFQGKLFMGR LRV P RQF +L
Sbjct: 276 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKLFMGRPLRVAPSRQFARL 335
Query: 321 QTKEGL 304
QTKEGL
Sbjct: 336 QTKEGL 341
Score = 107 bits (267), Expect(2) = 4e-94
Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Frame = -3
Query: 1154 LHCCFPSTSYLYTEPXXXXXXQFHGALFVSL----HNQHNSYYFPISLSPPQSHAYTFPI 987
L+CCFPSTSYLYTEP H A FVSL QH +Y+FP+S SP HAYTFPI
Sbjct: 63 LYCCFPSTSYLYTEPQQQQS---HEAPFVSLLQKQQKQHYNYFFPLSSSP--FHAYTFPI 117
Query: 986 RPKKVSPFVFHFSATTQDPXXXXXXXXSANTEQHKKNKKKNIL 858
PKKVSPFVFHFSATTQDP + NTEQ ++ K L
Sbjct: 118 TPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRL 160
>gb|KDO81066.1| hypothetical protein CISIN_1g021890mg [Citrus sinensis]
Length = 306
Score = 265 bits (677), Expect(2) = 1e-93
Identities = 137/186 (73%), Positives = 145/186 (77%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL+AQNVPWTSTHEDIRALFEQHGTVLD+ELSMH KNRNRGLAFVTMG
Sbjct: 99 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAAL 158
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR VQ KP TFNLFIANLSFEARAKDLREF ISE
Sbjct: 159 NNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISE 218
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
GWD+VSAEVIFHD P++S+GYGFVSFKSK+VAE AISAFQGKLFMGR LRV P RQF +L
Sbjct: 219 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKLFMGRPLRVAPSRQFARL 278
Query: 321 QTKEGL 304
QTKEGL
Sbjct: 279 QTKEGL 284
Score = 107 bits (267), Expect(2) = 1e-93
Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Frame = -3
Query: 1154 LHCCFPSTSYLYTEPXXXXXXQFHGALFVSL----HNQHNSYYFPISLSPPQSHAYTFPI 987
L+CCFPSTSYLYTEP H A FVSL QH +Y+FP+S SP HAYTFPI
Sbjct: 6 LYCCFPSTSYLYTEPQQQQS---HEAPFVSLLQKQQKQHYNYFFPLSSSP--FHAYTFPI 60
Query: 986 RPKKVSPFVFHFSATTQDPXXXXXXXXSANTEQHKKNKKKNIL 858
PKKVSPFVFHFSATTQDP + NTEQ ++ K L
Sbjct: 61 TPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRL 103
>ref|XP_006433911.1| hypothetical protein CICLE_v10001605mg [Citrus clementina]
gi|557536033|gb|ESR47151.1| hypothetical protein
CICLE_v10001605mg [Citrus clementina]
Length = 331
Score = 233 bits (593), Expect(2) = 7e-84
Identities = 121/165 (73%), Positives = 128/165 (77%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL+AQNVPWTSTHEDIRALFEQHGTVLDVELSMH KNRNRGLAFVTMG
Sbjct: 156 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDVELSMHSKNRNRGLAFVTMGSPDEATAAL 215
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR VQ KP TFNLFIANLSFEARAKDLREF ISE
Sbjct: 216 NNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISE 275
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFM 367
GWD+VSAEVIFHD P++S+GYGFVSFKSK+VAEAAISAFQGK+ M
Sbjct: 276 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAEAAISAFQGKVIM 320
Score = 107 bits (267), Expect(2) = 7e-84
Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Frame = -3
Query: 1154 LHCCFPSTSYLYTEPXXXXXXQFHGALFVSL----HNQHNSYYFPISLSPPQSHAYTFPI 987
L+CCFPSTSYLYTEP H A FVSL QH +Y+FP+S SP HAYTFPI
Sbjct: 63 LYCCFPSTSYLYTEPQQQQS---HEAPFVSLLQKQQKQHYNYFFPLSSSP--FHAYTFPI 117
Query: 986 RPKKVSPFVFHFSATTQDPXXXXXXXXSANTEQHKKNKKKNIL 858
PKKVSPFVFHFSATTQDP + NTEQ ++ K L
Sbjct: 118 TPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRL 160
>gb|KDO81067.1| hypothetical protein CISIN_1g021890mg [Citrus sinensis]
Length = 274
Score = 231 bits (588), Expect(2) = 3e-83
Identities = 119/165 (72%), Positives = 127/165 (76%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL+AQNVPWTSTHEDIRALFEQHGTVLD+ELSMH KNRNRGLAFVTMG
Sbjct: 99 SKTRLVAQNVPWTSTHEDIRALFEQHGTVLDIELSMHSKNRNRGLAFVTMGSPDEATAAL 158
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR VQ KP TFNLFIANLSFEARAKDLREF ISE
Sbjct: 159 NNLESYEFEGRTLKVNYAKIKKKNPFPPVQPKPFATFNLFIANLSFEARAKDLREFFISE 218
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFM 367
GWD+VSAEVIFHD P++S+GYGFVSFKSK+VAE AISAFQGK+ M
Sbjct: 219 GWDVVSAEVIFHDNPRRSAGYGFVSFKSKKVAETAISAFQGKVIM 263
Score = 107 bits (267), Expect(2) = 3e-83
Identities = 59/103 (57%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Frame = -3
Query: 1154 LHCCFPSTSYLYTEPXXXXXXQFHGALFVSL----HNQHNSYYFPISLSPPQSHAYTFPI 987
L+CCFPSTSYLYTEP H A FVSL QH +Y+FP+S SP HAYTFPI
Sbjct: 6 LYCCFPSTSYLYTEPQQQQS---HEAPFVSLLQKQQKQHYNYFFPLSSSP--FHAYTFPI 60
Query: 986 RPKKVSPFVFHFSATTQDPXXXXXXXXSANTEQHKKNKKKNIL 858
PKKVSPFVFHFSATTQDP + NTEQ ++ K L
Sbjct: 61 TPKKVSPFVFHFSATTQDPFVDSSSAAAVNTEQREEEYSKTRL 103
>ref|XP_012067930.1| PREDICTED: 29 kDa ribonucleoprotein, chloroplastic [Jatropha
curcas] gi|643734758|gb|KDP41428.1| hypothetical protein
JCGZ_15835 [Jatropha curcas]
Length = 300
Score = 202 bits (515), Expect(2) = 1e-56
Identities = 103/185 (55%), Positives = 129/185 (69%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
S+TR++AQN+PWT T EDIR LFE+ GTV+DVELSMH K RNRGLAFVTMG
Sbjct: 96 SRTRVLAQNIPWTCTPEDIRTLFEKFGTVMDVELSMHNKTRNRGLAFVTMGSAEEADAAV 155
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR KP PTFNLF+ANL FEA+ K+L+EF +E
Sbjct: 156 KNLESYEFEGRTLRINYAKIKKKKETPPPP-KPGPTFNLFVANLPFEAKEKELKEFFNAE 214
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
G D+VSAE+I+HD P++ SGYGFV+FK+K+ A+ A+SAF GK+FMGR +RV RQFV+
Sbjct: 215 GTDVVSAEIIYHDNPRRPSGYGFVAFKTKKQADDALSAFTGKIFMGRPIRVARSRQFVRQ 274
Query: 321 QTKEG 307
+ K+G
Sbjct: 275 ERKDG 279
Score = 46.6 bits (109), Expect(2) = 1e-56
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = -3
Query: 1145 CFPSTSYLYTEPXXXXXXQFH--GALFVSLHNQHNSYYFPISLSPPQSHAYTFPIRPKKV 972
C PST YL E F + S++ ++S +S S SH T PIR K
Sbjct: 8 CSPSTPYLSLEHHKTATPLFKPFNQSYNSINTNNSS---SLSWSLSHSHYRTLPIRINKT 64
Query: 971 SPFVFHFSATTQDPXXXXXXXXSANTEQHKKNKKK 867
S FV HFS+TTQDP + EQ + ++ +
Sbjct: 65 SHFVLHFSSTTQDPIVVSSSLTEKDEEQEEFSRTR 99
>gb|KHF99254.1| 29 kDa ribonucleoprotein B, chloroplastic [Gossypium arboreum]
Length = 290
Score = 216 bits (549), Expect(2) = 1e-55
Identities = 111/185 (60%), Positives = 134/185 (72%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
S TRLIAQNVPW+ T EDIR+LFE++GTV+DVELSMH K RNRGLAFV+M
Sbjct: 86 SNTRLIAQNVPWSCTVEDIRSLFEKYGTVVDVELSMHNKTRNRGLAFVSMASPEEALAAL 145
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYE EGR + KPVP FNLF+ANLS+E RAK L+EF SE
Sbjct: 146 NNLESYELEGRTLRLNYAKPKKKKAAPPEKPKPVPAFNLFVANLSYEVRAKHLKEFFSSE 205
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
G ++VSAEVIFHD P+KSSGYGFVSFKSK+ A+AA+S+FQGK+FMGR +RV+ RQFVK+
Sbjct: 206 GANVVSAEVIFHDSPRKSSGYGFVSFKSKKEADAAMSSFQGKMFMGRPIRVQRSRQFVKV 265
Query: 321 QTKEG 307
Q+ +G
Sbjct: 266 QSDDG 270
Score = 30.0 bits (66), Expect(2) = 1e-55
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -3
Query: 1073 FVSLHNQHNSYYFPISLSPPQSHAYTFPIRPKKVSPFVFHFSATTQDP 930
F S+ N ++ + P S SP + T + + F+ HFSATTQDP
Sbjct: 26 FSSIPNISSTCFLP-SFSPLTT---TLRFKATPFTSFILHFSATTQDP 69
>ref|XP_007018692.1| RNA-binding family protein, putative [Theobroma cacao]
gi|508724020|gb|EOY15917.1| RNA-binding family protein,
putative [Theobroma cacao]
Length = 290
Score = 219 bits (557), Expect(2) = 3e-55
Identities = 114/184 (61%), Positives = 135/184 (73%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRLIAQNVPWT T EDIR+LFE++GTV+DVELSMH K RNRGLAFV+M
Sbjct: 84 SKTRLIAQNVPWTCTTEDIRSLFEKYGTVVDVELSMHNKARNRGLAFVSMASPEEALAAL 143
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR + KPVP FNLF+ANLS+EARAK L+EF SE
Sbjct: 144 NNLESYEFEGRTLRLNYAKPKKKRPAPPEKPKPVPAFNLFVANLSYEARAKHLKEFFSSE 203
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
G ++VSAEVIFH+ P+KSSGYGFVSFKSK+ A+AA+SAFQGK+FMGR +RV RQFVK+
Sbjct: 204 GANVVSAEVIFHENPRKSSGYGFVSFKSKKEADAAMSAFQGKMFMGRPIRVARSRQFVKV 263
Query: 321 QTKE 310
Q+ +
Sbjct: 264 QSDD 267
Score = 25.8 bits (55), Expect(2) = 3e-55
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -3
Query: 1025 LSPPQSH-AYTFPIRPKKVSP-FVFHFSATTQDPXXXXXXXXSANTEQHKKNKKKNIL 858
L PP S T P+ ++ S F+ HFSATTQ P EQH++ K L
Sbjct: 36 LLPPFSPLTNTLPLIARRFSGNFILHFSATTQVPALKVN-----EQEQHEEEFSKTRL 88
>ref|XP_010530167.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Tarenaya
hassleriana]
Length = 307
Score = 216 bits (550), Expect(2) = 1e-54
Identities = 109/186 (58%), Positives = 136/186 (73%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SK+RLIAQNVPWTST EDIR+LFE++G V+D+E+SMH K+RNRGLAF+ MG
Sbjct: 99 SKSRLIAQNVPWTSTPEDIRSLFEKYGNVVDIEVSMHNKSRNRGLAFIEMGSPEEAASAL 158
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SY++EGR+ + PVPTFNLF+ANLSFEARAK+L+EF S
Sbjct: 159 RNLESYQYEGRVLKINYAKRKTEKPAPPAKPNPVPTFNLFVANLSFEARAKNLKEFFDSG 218
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
++VSAE+IFHD P++SSGYGFVSFK+K+ AEAA++ FQGK FMGR +RV +QFVKL
Sbjct: 219 SGNVVSAEIIFHDNPRRSSGYGFVSFKTKKQAEAALNDFQGKEFMGRPIRVARSKQFVKL 278
Query: 321 QTKEGL 304
Q KEGL
Sbjct: 279 QAKEGL 284
Score = 26.6 bits (57), Expect(2) = 1e-54
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 986 RPKKVSPFVFHFSATTQD 933
+PK S F +FSATTQD
Sbjct: 57 KPKPSSSFTLYFSATTQD 74
>ref|XP_012466735.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Gossypium
raimondii] gi|763747305|gb|KJB14744.1| hypothetical
protein B456_002G141400 [Gossypium raimondii]
Length = 293
Score = 218 bits (555), Expect = 8e-54
Identities = 116/217 (53%), Positives = 143/217 (65%)
Frame = -2
Query: 957 SFLCHHSRPSXXXXXXXXCKXXXXXXXXXXXYSKTRLIAQNVPWTSTHEDIRALFEQHGT 778
SF+ H S + + +SKTRLIAQNVPW+ T EDIR+LFE++GT
Sbjct: 57 SFILHFSATTQDPALEAKQEEEEEEEEEEEEFSKTRLIAQNVPWSCTVEDIRSLFEKYGT 116
Query: 777 VLDVELSMHKKNRNRGLAFVTMGXXXXXXXXXXXXXSYEFEGRIXXXXXXXXXXXXXXXX 598
V+DVELSMH K RNRGLAFV+M SYE EGR
Sbjct: 117 VVDVELSMHNKTRNRGLAFVSMASPEEALAALNNLESYELEGRTLRLNYAKANKKKAAPP 176
Query: 597 VQLKPVPTFNLFIANLSFEARAKDLREFLISEGWDIVSAEVIFHDKPKKSSGYGFVSFKS 418
+ KPVP FNLF+ANLS++ RAK L+EF SEG ++VSAEVIFHD P+KSSGYGFVSFKS
Sbjct: 177 EKPKPVPAFNLFVANLSYDVRAKHLKEFFSSEGANVVSAEVIFHDSPRKSSGYGFVSFKS 236
Query: 417 KRVAEAAISAFQGKLFMGRSLRVEPCRQFVKLQTKEG 307
K+ A+AA+SAFQGK+FMGR +RV+ RQFVK+Q+ +G
Sbjct: 237 KKEADAAMSAFQGKMFMGRPIRVQRSRQFVKVQSDDG 273
>ref|XP_010026026.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Eucalyptus
grandis] gi|629118598|gb|KCW83088.1| hypothetical
protein EUGRSUZ_B00046 [Eucalyptus grandis]
gi|629118599|gb|KCW83089.1| hypothetical protein
EUGRSUZ_B00046 [Eucalyptus grandis]
Length = 307
Score = 213 bits (543), Expect = 2e-52
Identities = 112/186 (60%), Positives = 131/186 (70%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRLIAQNVPWT T ED+R+LFE+HGTV++VELSMH K RNRGLAFV MG
Sbjct: 102 SKTRLIAQNVPWTCTAEDVRSLFEKHGTVVEVELSMHNKMRNRGLAFVEMGSAEEALNAL 161
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
S EFEGR+ Q +P+ TFNLFIANLS+EARAKDLREF +
Sbjct: 162 NSLESSEFEGRVLKVNYAKLRKKKSPPPAQPRPIATFNLFIANLSYEARAKDLREFFDAG 221
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
+ SAEVIFHD P++SSGYGFVSFKSK+ AEAA++ F+GK FMGR LRV +QF+KL
Sbjct: 222 SGKVASAEVIFHDNPRRSSGYGFVSFKSKKEAEAALTTFEGKDFMGRPLRVARSKQFLKL 281
Query: 321 QTKEGL 304
Q KE L
Sbjct: 282 QNKESL 287
>ref|XP_002306558.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222856007|gb|EEE93554.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 309
Score = 198 bits (503), Expect(2) = 2e-52
Identities = 107/184 (58%), Positives = 125/184 (67%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL A NVPW T EDIRALF++ GTV+DVELSM+ K RNRGLAFVTMG
Sbjct: 102 SKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVTMGSPEEAVAAL 161
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR KP PTFNLF+ANL FEA++KDL+EF I+E
Sbjct: 162 NNLESYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLFVANLPFEAKSKDLKEFFIAE 221
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
G ++VSAE+IFHD P++ SGYGFV+FK+K+ A+ AIS F K FMGR LRV RQFVK
Sbjct: 222 GANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLRVARSRQFVK- 280
Query: 321 QTKE 310
Q KE
Sbjct: 281 QRKE 284
Score = 37.0 bits (84), Expect(2) = 2e-52
Identities = 26/70 (37%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Frame = -3
Query: 1067 SLHNQHNSYYFPISLSPPQ-SHAYTFPIRPK-KVSPFVFHFSATTQD-PXXXXXXXXSAN 897
SLHN N++ F + + SH+ FPIR K F+ HFS+TTQD P
Sbjct: 28 SLHNHPNNFTFNTNTNNISLSHSLCFPIRNNNKFRHFLLHFSSTTQDHPVVDSSSLDDVV 87
Query: 896 TEQHKKNKKK 867
TE K ++K
Sbjct: 88 TEYQSKAEEK 97
>ref|XP_008466190.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Cucumis melo]
Length = 301
Score = 207 bits (528), Expect(2) = 2e-52
Identities = 113/184 (61%), Positives = 134/184 (72%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
S+TRL+AQNVPW ST EDIR+LFE++GTVLDVELSM+ K RNRGLAFVTMG
Sbjct: 98 SRTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 157
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR V+ KPV TFNLF+ANL FEARAKDLREF S
Sbjct: 158 NNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPV-TFNLFVANLPFEARAKDLREFFDSG 216
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
++VSA++IFH+ P++SSGYGFV+FK+K+ AEAAIS FQGK FMGRSLRV +QFVKL
Sbjct: 217 SGNVVSAQIIFHENPRRSSGYGFVAFKAKKDAEAAISEFQGKTFMGRSLRVARSKQFVKL 276
Query: 321 QTKE 310
++E
Sbjct: 277 PSEE 280
Score = 27.3 bits (59), Expect(2) = 2e-52
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -3
Query: 1034 PISLSPPQSHAYTFPIRPKKVSPFVFHFSATTQD 933
P LS H I K+ S FVF F++T+QD
Sbjct: 51 PSLLSTSICHNPLISIMAKRTSKFVFQFASTSQD 84
>ref|XP_004136268.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Cucumis
sativus] gi|700205105|gb|KGN60238.1| hypothetical
protein Csa_3G889940 [Cucumis sativus]
Length = 300
Score = 202 bits (514), Expect(2) = 2e-52
Identities = 110/184 (59%), Positives = 134/184 (72%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
S+TRL+AQNVPW ST EDIR+LFE++GTVLDVELSM+ K RNRGLAFVTMG
Sbjct: 97 SQTRLLAQNVPWDSTPEDIRSLFEKYGTVLDVELSMYNKIRNRGLAFVTMGSPEEALAAL 156
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR V+ KPV TFNLF+ANL F+ARAKDL+EF S
Sbjct: 157 NNLESYEFEGRTLRLNYAKLKKEKPSPPVKPKPV-TFNLFVANLPFDARAKDLKEFFDSG 215
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
++VSA++IF++ P++SSGYGFV+FK+K+ AEAAIS FQGK FMGRSLRV +QFVKL
Sbjct: 216 SGNVVSAQIIFNENPRRSSGYGFVAFKTKKDAEAAISEFQGKTFMGRSLRVARSKQFVKL 275
Query: 321 QTKE 310
++E
Sbjct: 276 PSEE 279
Score = 32.7 bits (73), Expect(2) = 2e-52
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -3
Query: 1034 PISLSPPQSHAYTFPIRPKKVSPFVFHFSATTQD 933
P LS SH+ IR K+ S FVF F++T+QD
Sbjct: 51 PSLLSTSISHSPLISIRAKRTSTFVFQFASTSQD 84
>ref|XP_011012428.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic-like [Populus
euphratica]
Length = 352
Score = 199 bits (505), Expect(2) = 6e-52
Identities = 106/184 (57%), Positives = 126/184 (68%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRL+A NVPW T EDIRALF++ GTV+DVELSM+ K RNRGLAFVTMG
Sbjct: 145 SKTRLLASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKTRNRGLAFVTMGSPEEAVAAL 204
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYEFEGR KP PTFNLF+ANL FEA++KDL+EF I+E
Sbjct: 205 NNLESYEFEGRTLKMNYAKAKKKKPSPPPPPKPGPTFNLFVANLPFEAKSKDLKEFFIAE 264
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
G ++VSAE+IFHD P++ SGYGFV+FK+K+ A+ AIS F K FMGR LR+ RQFVK
Sbjct: 265 GANVVSAEIIFHDNPRRPSGYGFVAFKTKQEADDAISTFSEKEFMGRQLRIARSRQFVK- 323
Query: 321 QTKE 310
Q KE
Sbjct: 324 QRKE 327
Score = 34.7 bits (78), Expect(2) = 6e-52
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = -3
Query: 1067 SLHNQHNSYYFPISLSPPQ-SHAYTFPIRPK-KVSPFVFHFSATTQD-PXXXXXXXXSAN 897
SLHN ++ F + + SH+ FPIR K F+ HFS+TTQD P
Sbjct: 71 SLHNHRYNFTFNTNTNNISLSHSLCFPIRNNNKFRHFLLHFSSTTQDHPVVDSSSLDDVV 130
Query: 896 TEQHKKNKKK 867
TE K ++K
Sbjct: 131 TEYQSKAEEK 140
>ref|XP_010101007.1| 28 kDa ribonucleoprotein [Morus notabilis]
gi|587898208|gb|EXB86655.1| 28 kDa ribonucleoprotein
[Morus notabilis]
Length = 605
Score = 206 bits (523), Expect = 4e-50
Identities = 111/183 (60%), Positives = 126/183 (68%)
Frame = -2
Query: 858 KTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXXX 679
K RL AQNVPW T EDIRALFE++GTV DVELSM K RNRGLAFVTMG
Sbjct: 405 KNRLYAQNVPWNCTPEDIRALFEKYGTVEDVELSMFNKTRNRGLAFVTMGSPEEALAALN 464
Query: 678 XXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISEG 499
SYE +GR+ +Q KP TFNLF+ANLSFEARAKDLREF SEG
Sbjct: 465 NLQSYELDGRVIKIDYARLRKKKVTTPMQPKPEVTFNLFVANLSFEARAKDLREFFNSEG 524
Query: 498 WDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKLQ 319
+VSAEVIFH+ P++S GYGFV+FKSK+ AEAA+SA QGK+FMGR +RV RQFVK
Sbjct: 525 HSVVSAEVIFHENPRRSLGYGFVAFKSKKEAEAALSAVQGKIFMGRPIRVARSRQFVKQP 584
Query: 318 TKE 310
T E
Sbjct: 585 TGE 587
>ref|XP_006288345.1| hypothetical protein CARUB_v10001593mg [Capsella rubella]
gi|565460694|ref|XP_006288346.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557051|gb|EOA21243.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
gi|482557052|gb|EOA21244.1| hypothetical protein
CARUB_v10001593mg [Capsella rubella]
Length = 297
Score = 204 bits (520), Expect = 9e-50
Identities = 106/187 (56%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRLIAQNVPW +T EDIR+LFE++G V+D+E+SMHKK RNRGL F+ MG
Sbjct: 82 SKTRLIAQNVPWAATPEDIRSLFEKYGNVVDIEMSMHKKERNRGLVFIEMGSPEEAAEAL 141
Query: 681 XXXXSYEFEGR-IXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLIS 505
SYE+EGR + + PVPTFNLF+ANL+FEARAK L+EF +
Sbjct: 142 KALESYEYEGRRLKVDYAKAKKKKTYAPREKPSPVPTFNLFVANLAFEARAKHLKEFFDA 201
Query: 504 EGWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVK 325
+ ++VS EVIFH+ P++SSGYGFVSFK+K+ AEAAI FQGK FMGR +R+ +QFVK
Sbjct: 202 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAAIIEFQGKDFMGRPIRLARSKQFVK 261
Query: 324 LQTKEGL 304
LQ KEGL
Sbjct: 262 LQAKEGL 268
>ref|XP_002285735.1| PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|731428489|ref|XP_010664354.1| PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|731428491|ref|XP_010664355.1| PREDICTED: 28 kDa
ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|302142004|emb|CBI19207.3| unnamed protein product
[Vitis vinifera]
Length = 294
Score = 201 bits (510), Expect(2) = 1e-49
Identities = 104/183 (56%), Positives = 128/183 (69%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
S+TRLIAQN+PWT T +DIR+LFE++GTVLDVELSMH K RNRGLAF++MG
Sbjct: 87 SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYE EGR +Q KPV +NLFIANL ++ARAKDLREF S
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSG 206
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
++VSAEVIFH+ P++SSGYGFVSF SK A+ A+S+FQG++FMGR LRV R+FVK
Sbjct: 207 NCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKR 266
Query: 321 QTK 313
+ K
Sbjct: 267 ENK 269
Score = 25.0 bits (53), Expect(2) = 1e-49
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -3
Query: 1151 HCCFPS-TSYLYTEPXXXXXXQFHGALFVSLHNQHNSYYFPISLSPPQSHAYTFPIR-PK 978
H CFPS TS+L +P H+ F S S P SHA P+R +
Sbjct: 6 HLCFPSTTSFLTPQPLQKPL--------------HSILSFSSSFS-PLSHA--LPLRTTR 48
Query: 977 KVSPFVFHFSATTQDP 930
+++ F SA TQ P
Sbjct: 49 RINLFHVSASAQTQSP 64
>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
Length = 294
Score = 201 bits (510), Expect(2) = 1e-49
Identities = 104/183 (56%), Positives = 128/183 (69%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
S+TRLIAQN+PWT T +DIR+LFE++GTVLDVELSMH K RNRGLAF++MG
Sbjct: 87 SRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAAL 146
Query: 681 XXXXSYEFEGRIXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLISE 502
SYE EGR +Q KPV +NLFIANL ++ARAKDLREF S
Sbjct: 147 SNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTPYNLFIANLPYQARAKDLREFFSSG 206
Query: 501 GWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVKL 322
++VSAEVIFH+ P++SSGYGFVSF SK A+ A+S+FQG++FMGR LRV R+FVK
Sbjct: 207 NCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKR 266
Query: 321 QTK 313
+ K
Sbjct: 267 ENK 269
Score = 25.0 bits (53), Expect(2) = 1e-49
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -3
Query: 1151 HCCFPS-TSYLYTEPXXXXXXQFHGALFVSLHNQHNSYYFPISLSPPQSHAYTFPIR-PK 978
H CFPS TS+L +P H+ F S S P SHA P+R +
Sbjct: 6 HLCFPSTTSFLTXQPLQKPL--------------HSILSFSSSFS-PLSHA--LPLRXTR 48
Query: 977 KVSPFVFHFSATTQDP 930
+++ F SA TQ P
Sbjct: 49 RINLFHVSASAQTQSP 64
>ref|XP_013656115.1| PREDICTED: RNA-binding protein CP33, chloroplastic-like [Brassica
napus] gi|923689514|ref|XP_013656116.1| PREDICTED:
RNA-binding protein CP33, chloroplastic-like [Brassica
napus]
Length = 330
Score = 203 bits (517), Expect = 2e-49
Identities = 106/187 (56%), Positives = 132/187 (70%), Gaps = 1/187 (0%)
Frame = -2
Query: 861 SKTRLIAQNVPWTSTHEDIRALFEQHGTVLDVELSMHKKNRNRGLAFVTMGXXXXXXXXX 682
SKTRLIAQNVPWTST EDIR+LFE+ G V+DVE+SMHKK RNRGL F+ M
Sbjct: 119 SKTRLIAQNVPWTSTPEDIRSLFEKFGNVVDVEMSMHKKERNRGLVFIEMASPEEAASAL 178
Query: 681 XXXXSYEFEGR-IXXXXXXXXXXXXXXXXVQLKPVPTFNLFIANLSFEARAKDLREFLIS 505
SYE+EGR + + PVPTFNLF+ANL+FEARAK L+EF +
Sbjct: 179 QALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDA 238
Query: 504 EGWDIVSAEVIFHDKPKKSSGYGFVSFKSKRVAEAAISAFQGKLFMGRSLRVEPCRQFVK 325
+ ++VS EVIFH+ P++SSGYGFVSFK+K++A+AA+ FQGK FMGR +R+ +QFVK
Sbjct: 239 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVK 298
Query: 324 LQTKEGL 304
LQ KEGL
Sbjct: 299 LQAKEGL 305