BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00004982
         (1633 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006467340.1| PREDICTED: transcription initiation factor I...   723   0.0  
ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citr...   723   0.0  
gb|KDO78433.1| hypothetical protein CISIN_1g008099mg [Citrus sin...   703   0.0  
gb|KDO78436.1| hypothetical protein CISIN_1g008099mg [Citrus sin...   672   0.0  
ref|XP_007026247.1| Transcription activators,DNA binding,RNA pol...   624   e-176
ref|XP_012449917.1| PREDICTED: transcription initiation factor I...   619   e-174
gb|KHG13582.1| Transcription initiation factor IIF subunit alpha...   619   e-174
gb|KDO78437.1| hypothetical protein CISIN_1g008099mg [Citrus sin...   617   e-174
ref|XP_012069319.1| PREDICTED: transcription initiation factor I...   616   e-173
ref|XP_011008636.1| PREDICTED: transcription initiation factor I...   612   e-172
ref|XP_002308775.1| transcription initiation factor IIF alpha su...   609   e-171
ref|XP_002322538.2| transcription initiation factor IIF alpha su...   609   e-171
ref|XP_011001011.1| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   602   e-169
ref|XP_010270094.1| PREDICTED: transcription initiation factor I...   598   e-168
ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|...   597   e-167
ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Popu...   593   e-166
ref|XP_010057855.1| PREDICTED: transcription initiation factor I...   593   e-166
gb|KJB67331.1| hypothetical protein B456_010G186300 [Gossypium r...   587   e-165
ref|XP_010057857.1| PREDICTED: transcription initiation factor I...   580   e-162
ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phas...   579   e-162

>ref|XP_006467340.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            isoform X1 [Citrus sinensis]
            gi|568825955|ref|XP_006467341.1| PREDICTED: transcription
            initiation factor IIF subunit alpha-like isoform X2
            [Citrus sinensis] gi|641859741|gb|KDO78431.1|
            hypothetical protein CISIN_1g008099mg [Citrus sinensis]
            gi|641859742|gb|KDO78432.1| hypothetical protein
            CISIN_1g008099mg [Citrus sinensis]
          Length = 538

 Score =  723 bits (1865), Expect = 0.0
 Identities = 388/541 (71%), Positives = 404/541 (74%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKPQCSGCGSQ DLYGSNCKHMTLCLTCGKTMAENKAKC DCGA+VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VRPS SSDKNYFIGRFVSGLPSFSKKKN ENKWTL+KDGLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDKES G          GDEDEGNVSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA+RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEEREDLAPEVPAPPEIKQ                        GRANGLNES      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNES-DAEDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                     E+GFSP+LAPK KDTPKKEEPA+NSPAK               SAKGKRKS
Sbjct: 360  DDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKS 419

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXPVT 185
            NGDDA+A SGAPLKKVKTENETKSSA+D NV                          PVT
Sbjct: 420  NGDDARAPSGAPLKKVKTENETKSSARDENV--SASKSSAPAKGASSSRTGSTSASGPVT 477

Query: 184  AEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYVVLRE 5
            AEEIRAVLLQ+APVT QDLV KFKPR++STEDR AFADILKRISK+QKTNGP+ YVVLRE
Sbjct: 478  AEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLRE 537

Query: 4    K 2
            K
Sbjct: 538  K 538


>ref|XP_006449854.1| hypothetical protein CICLE_v10014841mg [Citrus clementina]
            gi|567915083|ref|XP_006449855.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552465|gb|ESR63094.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
            gi|557552466|gb|ESR63095.1| hypothetical protein
            CICLE_v10014841mg [Citrus clementina]
          Length = 538

 Score =  723 bits (1865), Expect = 0.0
 Identities = 388/541 (71%), Positives = 404/541 (74%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKPQCSGCGSQ DLYGSNCKHMTLCLTCGKTMAENKAKC DCGA+VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQVDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VRPS SSDKNYFIGRFVSGLPSFSKKKN ENKWTL+KDGLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDKES G          GDEDEGNVSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA+RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEEREDLAPEVPAPPEIKQ                        GRANGLNES      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNES-DAEDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                     E+GFSP+LAPK KDTPKKEEPA+NSPAK               SAKGKRKS
Sbjct: 360  DDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKS 419

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXPVT 185
            NGDDA+A SGAPLKKVKTENETKSSA+D NV                          PVT
Sbjct: 420  NGDDARAPSGAPLKKVKTENETKSSARDENV--SASKSSAPAKGASSSRTGSTSASGPVT 477

Query: 184  AEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYVVLRE 5
            AEEIRAVLLQ+APVT QDLV KFKPR++STEDR AFADILKRISK+QKTNGP+ YVVLRE
Sbjct: 478  AEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEDRTAFADILKRISKIQKTNGPSNYVVLRE 537

Query: 4    K 2
            K
Sbjct: 538  K 538


>gb|KDO78433.1| hypothetical protein CISIN_1g008099mg [Citrus sinensis]
          Length = 577

 Score =  703 bits (1815), Expect = 0.0
 Identities = 388/580 (66%), Positives = 404/580 (69%), Gaps = 39/580 (6%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKPQCSGCGSQ DLYGSNCKHMTLCLTCGKTMAENKAKC DCGA+VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VRPS SSDKNYFIGRFVSGLPSFSKKKN ENKWTL+KDGLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDKES G          GDEDEGNVSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA+RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEEREDLAPEVPAPPEIKQ                        GRANGLNES      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNES-DAEDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                     E+GFSP+LAPK KDTPKKEEPA+NSPAK               SAKGKRKS
Sbjct: 360  DDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKS 419

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXPVT 185
            NGDDA+A SGAPLKKVKTENETKSSA+D NV                          PVT
Sbjct: 420  NGDDARAPSGAPLKKVKTENETKSSARDENV--SASKSSAPAKGASSSRTGSTSASGPVT 477

Query: 184  AEEIRAVLLQKAPVTAQDLVDKFKPRIKSTE----------------------------- 92
            AEEIRAVLLQ+APVT QDLV KFKPR++STE                             
Sbjct: 478  AEEIRAVLLQQAPVTTQDLVAKFKPRLRSTEGFGSLSCSTLSMFGKSYEMPAWMGIPDVA 537

Query: 91   ----------DRRAFADILKRISKLQKTNGPNKYVVLREK 2
                      DR AFADILKRISK+QKTNGP+ YVVLREK
Sbjct: 538  FLSLKLLLMQDRTAFADILKRISKIQKTNGPSNYVVLREK 577


>gb|KDO78436.1| hypothetical protein CISIN_1g008099mg [Citrus sinensis]
          Length = 521

 Score =  672 bits (1733), Expect = 0.0
 Identities = 362/511 (70%), Positives = 376/511 (73%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKPQCSGCGSQ DLYGSNCKHMTLCLTCGKTMAENKAKC DCGA+VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VRPS SSDKNYFIGRFVSGLPSFSKKKN ENKWTL+KDGLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDKES G          GDEDEGNVSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA+RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEEREDLAPEVPAPPEIKQ                        GRANGLNES      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNES-DAEDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                     E+GFSP+LAPK KDTPKKEEPA+NSPAK               SAKGKRKS
Sbjct: 360  DDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKS 419

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXPVT 185
            NGDDA+A SGAPLKKVKTENETKSSA+D NV                          PVT
Sbjct: 420  NGDDARAPSGAPLKKVKTENETKSSARDENV--SASKSSAPAKGASSSRTGSTSASGPVT 477

Query: 184  AEEIRAVLLQKAPVTAQDLVDKFKPRIKSTE 92
            AEEIRAVLLQ+APVT QDLV KFKPR++STE
Sbjct: 478  AEEIRAVLLQQAPVTTQDLVAKFKPRLRSTE 508


>ref|XP_007026247.1| Transcription activators,DNA binding,RNA polymerase II transcription
            factors,catalytics,transcription initiation factors
            isoform 1 [Theobroma cacao] gi|508781613|gb|EOY28869.1|
            Transcription activators,DNA binding,RNA polymerase II
            transcription factors,catalytics,transcription initiation
            factors isoform 1 [Theobroma cacao]
          Length = 549

 Score =  624 bits (1610), Expect = e-176
 Identities = 340/554 (61%), Positives = 378/554 (68%), Gaps = 13/554 (2%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LK  CSGCGS  DLYGSNCKHMTLC+TCGKTMAEN+ KC +CGA+VTRLIREYN
Sbjct: 1    MSFDLMLKSSCSGCGSTVDLYGSNCKHMTLCVTCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VRPS S+DKN+FIGRF+SGLPSFSKKKN ENKW+L K+GLQGRQ++D LREKYKNKPW+L
Sbjct: 61   VRPSPSTDKNFFIGRFMSGLPSFSKKKNAENKWSLQKEGLQGRQLTDPLREKYKNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QGHLEGSQSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDK++            GD+DEG+VSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKFDDKDNSVAGGKGRKKPTGDDDEGHVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA RKNRL L+                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEEEEAARKNRLGLDKKGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            N+PEER DLAPEVPAPPEIK+                        G+A GLN+S      
Sbjct: 301  NEPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKAGGLNDSDADDDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                      M F+P  A KQKD PK EEPA+NSP K               SAKGKRK+
Sbjct: 360  DDDDDDD---MSFNPAPASKQKDAPK-EEPADNSPMKPASSASARGTSTASKSAKGKRKA 415

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKD-------------GNVXXXXXXXXXXXXXXXX 224
            NGDD KAS+G PLKKVK+E ++KSS K+             G                  
Sbjct: 416  NGDDTKASNGTPLKKVKSETDSKSSVKEESASASKGSVPPKGTPSSAKAGSTSSAVTSSS 475

Query: 223  XXXXXXXXXXPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQ 44
                      PVT EEIRAVLLQKAPVT  DLV KFK R+KS ED++AFADIL+RISK+Q
Sbjct: 476  AKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQ 535

Query: 43   KTNGPNKYVVLREK 2
            KTNGPN YVVLR+K
Sbjct: 536  KTNGPNNYVVLRDK 549


>ref|XP_012449917.1| PREDICTED: transcription initiation factor IIF subunit alpha
            [Gossypium raimondii] gi|823234571|ref|XP_012449918.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Gossypium raimondii]
            gi|823234573|ref|XP_012449919.1| PREDICTED: transcription
            initiation factor IIF subunit alpha [Gossypium raimondii]
            gi|763800373|gb|KJB67328.1| hypothetical protein
            B456_010G186300 [Gossypium raimondii]
            gi|763800374|gb|KJB67329.1| hypothetical protein
            B456_010G186300 [Gossypium raimondii]
          Length = 547

 Score =  619 bits (1595), Expect = e-174
 Identities = 338/553 (61%), Positives = 376/553 (67%), Gaps = 12/553 (2%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LKP CSGCGS  DLYGSNCKHMTLC++CGKTMAEN+ KC +CGA+VTRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S S+DKNYFIGRF++GLP+FSKKKN EN+W+L KDGLQGRQV+D LREKYKNKPW+L
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QG LEGSQSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK D+KE+            G+E+EG+VSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEER DLAPEVPAPPEIK+                        G+A+GLN+S      
Sbjct: 301  NDPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADEDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                      M F+P  APKQKD PK EEPA+NSP K               S+KGKRK 
Sbjct: 360  DDEDVDDD--MNFNPTPAPKQKDAPK-EEPADNSPMKPAPSASARGTPAASKSSKGKRK- 415

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXP-- 191
             GDD KAS+G PLKKVK+E E+K+S K+ N                              
Sbjct: 416  -GDDTKASNGTPLKKVKSEPESKTSVKEENTSASKGSAPSKGTSSSAKAGSTSAASASSS 474

Query: 190  ----------VTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQK 41
                      VT EEIRAVLLQKAPVT  DLV KFK R+KS ED++AFADIL+RISK+QK
Sbjct: 475  KAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQK 534

Query: 40   TNGPNKYVVLREK 2
            TNGPN YVVLREK
Sbjct: 535  TNGPNNYVVLREK 547


>gb|KHG13582.1| Transcription initiation factor IIF subunit alpha -like protein
            [Gossypium arboreum]
          Length = 547

 Score =  619 bits (1595), Expect = e-174
 Identities = 338/553 (61%), Positives = 376/553 (67%), Gaps = 12/553 (2%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LKP CSGCGS  DLYGSNCKHMTLC++CGKTMAEN+ KC +CGA+VTRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S S+DKNYFIGRF++GLP+FSKKKN EN+W+L KDGLQGRQV+D LREKYKNKPW+L
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QG LEGSQSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK D+KE+            G+E+EG+VSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEER DLAPEVPAPPEIK+                        G+A+GLN+S      
Sbjct: 301  NDPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKASGLNDSDADEED 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                      M F+P  APKQKD PK EEPA+NSP K               S+KGKRK 
Sbjct: 360  DDEDVDDD--MNFNPTPAPKQKDAPK-EEPADNSPMKPAPSASARGTPATSKSSKGKRK- 415

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXP-- 191
             GDD KAS+G PLKKVK+E E+K+S K+ N                              
Sbjct: 416  -GDDTKASNGTPLKKVKSEPESKTSVKEENTAASKGSAPSKGTSSSAKAGSTSAASASSS 474

Query: 190  ----------VTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQK 41
                      VT EEIRAVLLQKAPVT  DLV KFK R+KS ED++AFADIL+RISK+QK
Sbjct: 475  KAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISKIQK 534

Query: 40   TNGPNKYVVLREK 2
            TNGPN YVVLREK
Sbjct: 535  TNGPNNYVVLREK 547


>gb|KDO78437.1| hypothetical protein CISIN_1g008099mg [Citrus sinensis]
          Length = 453

 Score =  617 bits (1591), Expect = e-174
 Identities = 324/440 (73%), Positives = 334/440 (75%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKPQCSGCGSQ DLYGSNCKHMTLCLTCGKTMAENKAKC DCGA+VTRLIREYN
Sbjct: 1    MSFDLLLKPQCSGCGSQADLYGSNCKHMTLCLTCGKTMAENKAKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VRPS SSDKNYFIGRFVSGLPSFSKKKN ENKWTL+KDGLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRPSNSSDKNYFIGRFVSGLPSFSKKKNAENKWTLHKDGLQGRQVTDTLREKYKNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDKES G          GDEDEGNVSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKPDDKESAGTGGRGRSKKSGDEDEGNVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  EA+RKNRL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDEEAKRKNRLGLNKRGEDDDEEGPRGGDLDLDEDDVEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXXX 545
            NDPEEREDLAPEVPAPPEIKQ                        GRANGLNES      
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDEEDEDEEEEGGLSKSGKELKKLLGRANGLNES-DAEDD 359

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                     E+GFSP+LAPK KDTPKKEEPA+NSPAK               SAKGKRKS
Sbjct: 360  DDEDDDMEDEVGFSPILAPKHKDTPKKEEPADNSPAKPAPSGSGRATPSTSKSAKGKRKS 419

Query: 364  NGDDAKASSGAPLKKVKTEN 305
            NGDDA+A SGAPLKKVKTEN
Sbjct: 420  NGDDARAPSGAPLKKVKTEN 439


>ref|XP_012069319.1| PREDICTED: transcription initiation factor IIF subunit alpha
            [Jatropha curcas] gi|802578042|ref|XP_012069320.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|802578044|ref|XP_012069321.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|802578046|ref|XP_012069322.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha [Jatropha curcas] gi|643733570|gb|KDP40450.1|
            hypothetical protein JCGZ_03950 [Jatropha curcas]
          Length = 533

 Score =  616 bits (1588), Expect = e-173
 Identities = 339/543 (62%), Positives = 375/543 (69%), Gaps = 2/543 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LKP CSGCGS  +LYGSNCKHMTLCLTCGKTMAEN+ KC DCGA VTRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSTQELYGSNCKHMTLCLTCGKTMAENRGKCYDCGATVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S+SSDKNYFIGRFV+GLPSFSKKK+ ENKW+L+KDGLQGRQ++D LREKY+NKPW+L
Sbjct: 61   VRASSSSDKNYFIGRFVTGLPSFSKKKSAENKWSLHKDGLQGRQLTDALREKYRNKPWML 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ+Q+QGHLEGSQSATYYLL++  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLILQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKES-VGIXXXXXXXXXGDEDEGNVSDR 908
            KNRRKTADGY+RWMMKAANNGAAAFGEVEK DDKES             GDE+EGNVSDR
Sbjct: 181  KNRRKTADGYQRWMMKAANNGAAAFGEVEKFDDKESGTAGGKGGRKKPAGDEEEGNVSDR 240

Query: 907  GXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 728
                   EA RKNRL LN                           DWEHEEIFTDDDEAV
Sbjct: 241  AEEDEEEEAARKNRLGLNKRSGDDDEEGLRGGDHDMDDDDSEKGDDWEHEEIFTDDDEAV 300

Query: 727  GNDPEEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXX 551
            GNDPEEREDLAPEVPAPPEIKQ                         G+A GLN+S    
Sbjct: 301  GNDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKAAGLNDSDAED 360

Query: 550  XXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKR 371
                           SPVLAPKQKD P KEEP +NSPAK               SAKGKR
Sbjct: 361  DDDDEDMEE----DVSPVLAPKQKDAP-KEEPVDNSPAKPMPSSSAKGTPSNSKSAKGKR 415

Query: 370  KSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXP 191
            K +GDDAK SSGAP KKVK EN+ K + K+ +                           P
Sbjct: 416  KLSGDDAKTSSGAPQKKVKAENDLKPTVKEEHA----PTAKSSPTPKGATSSLKPGSTSP 471

Query: 190  VTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYVVL 11
            VT EEIRAVLLQ  PVT QDLV +FK R+K +ED++AFA+IL+RISK+QKT+G N YVVL
Sbjct: 472  VTEEEIRAVLLQNGPVTTQDLVARFKSRLKGSEDKKAFAEILRRISKIQKTSGSN-YVVL 530

Query: 10   REK 2
            RE+
Sbjct: 531  RER 533


>ref|XP_011008636.1| PREDICTED: transcription initiation factor IIF subunit alpha [Populus
            euphratica]
          Length = 539

 Score =  612 bits (1578), Expect = e-172
 Identities = 334/543 (61%), Positives = 371/543 (68%), Gaps = 2/543 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL L+P CSGCGS TDLYGSNCKHMTLCLTCGK MAEN+ KC DCGA+VTRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKAMAENRGKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S SS+KNYFIGRFV+GLP FSKKKN ENKW+L K+G+ GRQ++DTLREK+KNKPW+L
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ Q+QGHLEGSQSATYYLL+M  KEFVAIPAGSWYNFNKVA YKQLTLEEAEEKM
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYNFNKVAHYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGI-XXXXXXXXXGDEDEGNVSDR 908
            KNRRKTADGYERWMMKAA+NGAAAFGEVEK DDK+ V            GD+DEGNVSD+
Sbjct: 181  KNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGKGGRKKANGDDDEGNVSDK 240

Query: 907  GXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 728
            G      EA RK+RL LN                           DWEHEEIFTDDDEAV
Sbjct: 241  GEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAV 300

Query: 727  GNDPEEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXX 551
              DPEEREDLAPEVPAPPEIKQ                         G+ANGLNES    
Sbjct: 301  AIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDAED 360

Query: 550  XXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKR 371
                           SPVLAPKQKD   KEEPA+NSPAK               SAKGKR
Sbjct: 361  DDDDDDMDDDS----SPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKGKR 416

Query: 370  KSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXP 191
            K N DDAK S+GAP+KKVKTENE K + K+ +                           P
Sbjct: 417  KLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKAMPSSSKTGPTSGATGP 476

Query: 190  VTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYVVL 11
            VT EEIRAVLLQ  PVT QDLV +FK R+++ ED++AFADIL+RISK+QKT+G N +VVL
Sbjct: 477  VTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN-FVVL 535

Query: 10   REK 2
            R+K
Sbjct: 536  RDK 538


>ref|XP_002308775.1| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|222854751|gb|EEE92298.1|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 541

 Score =  609 bits (1571), Expect = e-171
 Identities = 335/545 (61%), Positives = 372/545 (68%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL L+P CSGCGS TDLYGSNCKHMTLCLTCGKTMAEN+ KC DCGA+VTRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S SS+KNYFIGRFV+GLP FSKKKN ENKW+L K+G+ GRQ++DTLREK+KNKPW+L
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1091
            EDETGQ Q+QGHLEGSQSATYYLL+M  KEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 1090 KMKNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGI-XXXXXXXXXGDEDEGNVS 914
            KMKNRRKTADGYERWMMKAA+NGAAAFGEVEK DDK+ V            GD+DEGNVS
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 913  DRGXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 734
            D+G      EA RK+RL LN                           DWEHEEIFTDDDE
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 733  AVGNDPEEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXX 557
            AV  DPEEREDLAPEVPAPPEIKQ                         G+ANGLNES  
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDA 360

Query: 556  XXXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKG 377
                             SPVLAPKQKD   KEEPA+NSPAK               SAKG
Sbjct: 361  EDDDDDDDMDD----DISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKG 416

Query: 376  KRKSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXX 197
            KRK N DDAK S+GAP+KKVKTENE K + K+ +                          
Sbjct: 417  KRKLNADDAKTSNGAPVKKVKTENEVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPT 476

Query: 196  XPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYV 17
             PVT EEIRAVLLQ  PVT QDLV +FK R+++ ED++AFADIL+RISK+QKT+G N +V
Sbjct: 477  GPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN-FV 535

Query: 16   VLREK 2
            VLR+K
Sbjct: 536  VLRDK 540


>ref|XP_002322538.2| transcription initiation factor IIF alpha subunit family protein
            [Populus trichocarpa] gi|550320589|gb|EEF04299.2|
            transcription initiation factor IIF alpha subunit family
            protein [Populus trichocarpa]
          Length = 540

 Score =  609 bits (1571), Expect = e-171
 Identities = 337/545 (61%), Positives = 372/545 (68%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKP CSGCGS TDLYGSNCKHMTLCL CGKTMAEN+ KC DCG  V+RLIREYN
Sbjct: 1    MSFDLLLKPSCSGCGSTTDLYGSNCKHMTLCLNCGKTMAENRGKCFDCGTTVSRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S SSDKNYFIGRFV+GLPSFSKKKN ENKW+L+K+G+ GRQ++D LREK+KNKPW+L
Sbjct: 61   VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWSLHKEGILGRQITDALREKFKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1091
            EDETGQ+Q+QGHLEGSQSATYYLL+M  KEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMMTGKEFVAIPAGSWYVYNFNKVAHYKQLTLEEAEE 180

Query: 1090 KMKNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGI-XXXXXXXXXGDEDEGNVS 914
            KMKNRRKTADGYERWMMKAANNGAAAFGEVEK DDKE V            GD+DEGNVS
Sbjct: 181  KMKNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVS 240

Query: 913  DRGXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 734
            DRG      EA RK+RL LN                           DWEHEEIFTDDDE
Sbjct: 241  DRGEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 733  AVGNDPEEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXX 557
            AV  DPEEREDLAPEVPAPPEIKQ                         G+ANGLNES  
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGKANGLNESDV 360

Query: 556  XXXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKG 377
                             SPVLAPKQKD   KEE A+ SPAK               SAKG
Sbjct: 361  EDDDDDEDMDD----DISPVLAPKQKDVVPKEEAADISPAKPTPSGSAKGTPSTSKSAKG 416

Query: 376  KRKSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXX 197
            KRK NG+DAK+S+GAP+KKVKTENE K + K+ +                          
Sbjct: 417  KRKLNGEDAKSSNGAPVKKVKTENEVKPAVKEESSPATKGTATPKVTPPSSKTGSTSGST 476

Query: 196  XPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYV 17
             PVT EEIRAVLLQ  PVT QDLV +FK R+++ ED++AFADIL+RISK+QKT+G N YV
Sbjct: 477  GPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN-YV 535

Query: 16   VLREK 2
            VLR+K
Sbjct: 536  VLRDK 540


>ref|XP_011001011.1| PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF
            subunit alpha-like [Populus euphratica]
          Length = 527

 Score =  602 bits (1553), Expect = e-169
 Identities = 334/542 (61%), Positives = 367/542 (67%), Gaps = 1/542 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDLLLKP    CGS TDLYGSNCKHMTLCLTCGK MAEN+ KC DCG  VTRLIREYN
Sbjct: 1    MSFDLLLKPSXXRCGSTTDLYGSNCKHMTLCLTCGKAMAENRGKCFDCGTTVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S SSDKNYFIGRFV+GLPSFSKKKN ENKW L+K+G+ GRQ++D LREK+KNKPW+L
Sbjct: 61   VRASTSSDKNYFIGRFVTGLPSFSKKKNAENKWALHKEGILGRQITDALREKFKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ+Q+QGHLEGSQSATYYLL+M  KE VAIPAGSWYNFNKVA YKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYQGHLEGSQSATYYLLMMTGKEVVAIPAGSWYNFNKVAHYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGI-XXXXXXXXXGDEDEGNVSDR 908
            KNRRKTADGYERWMMKAANNGAAAFGEVEK DDKE V            GD+DEGNVSDR
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKVDDKEGVSAGGRGGRRKASGDDDEGNVSDR 240

Query: 907  GXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAV 728
            G      EA RK+RL LN                           DWEHEEIFTDDDEAV
Sbjct: 241  GEEDEEEEAGRKSRLGLNKQGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDEAV 300

Query: 727  GNDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXX 548
              DPEEREDLAPEVPAPPEIKQ                        G+ANGLNES     
Sbjct: 301  AIDPEEREDLAPEVPAPPEIKQ----------VCLSKSGXELKKLLGKANGLNESDVEDD 350

Query: 547  XXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRK 368
                          SPVLAPKQKD   KEE  + SPAK               SAKGKRK
Sbjct: 351  DDDEDMDD----DISPVLAPKQKDVVPKEEATDISPAKPMPSGSAKGTPSTSKSAKGKRK 406

Query: 367  SNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXPV 188
             NG+DAK+S+GAP+KKVKTENE K + K+ +                           PV
Sbjct: 407  LNGEDAKSSNGAPVKKVKTENEVKPAMKEESSPATKGTATPKVTPPSSKTGSSSGSTGPV 466

Query: 187  TAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYVVLR 8
            T EEIRAVLLQ  PVT QDLV +FK R+++ ED++AFADIL+RISK+QKT+G N YVVLR
Sbjct: 467  TEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN-YVVLR 525

Query: 7    EK 2
            +K
Sbjct: 526  DK 527


>ref|XP_010270094.1| PREDICTED: transcription initiation factor IIF subunit alpha-like
            [Nelumbo nucifera] gi|720045081|ref|XP_010270096.1|
            PREDICTED: transcription initiation factor IIF subunit
            alpha-like [Nelumbo nucifera]
          Length = 540

 Score =  598 bits (1541), Expect = e-168
 Identities = 335/553 (60%), Positives = 365/553 (66%), Gaps = 12/553 (2%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MS DLLLKP C GCGS +DLYGSNCKHMTLCL+CGKTMAEN  KC +CG  VTRLIREYN
Sbjct: 1    MSSDLLLKPSCGGCGSTSDLYGSNCKHMTLCLSCGKTMAENHGKCYECGVPVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S +SDK YFIGRFV+G+P+FSKKKN  NKW+L K+GLQGRQV+D LREKYKNKPW+L
Sbjct: 61   VRASPASDKTYFIGRFVTGIPNFSKKKNASNKWSLQKEGLQGRQVTDALREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ+Q+ G LEGSQSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYHGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXG---DEDEGNVS 914
            KNRRKTADGY+RWMMKAANNG AAFGEVEK DDKES G              DEDEGN S
Sbjct: 181  KNRRKTADGYQRWMMKAANNGPAAFGEVEKFDDKESGGGGGGGGRGRKKATGDEDEGNAS 240

Query: 913  DRGXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 734
            DRG      E  RKNRL L                            DWEHEEIFTDDDE
Sbjct: 241  DRGEEDEEEEEARKNRLGLRKLAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTDDDE 300

Query: 733  AVGNDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXG--RANGLNESX 560
            AVGNDPEEREDLAPEVPAPPEIKQ                           RA GLN+S 
Sbjct: 301  AVGNDPEEREDLAPEVPAPPEIKQDEEDEDEANEEEGGLSKSGKELKKLLGRAGGLNDSD 360

Query: 559  XXXXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAK 380
                           MG SPVLAPKQKD+PK EEPA++SP+K               S+K
Sbjct: 361  AEEEEDDDDMEDE--MGMSPVLAPKQKDSPK-EEPADSSPSKPVPSGSARGTPSTSKSSK 417

Query: 379  GKRKSNGDDAKASSGAPLKKVKTENETKSSAKD-------GNVXXXXXXXXXXXXXXXXX 221
             KRKS GDD K  +GAP KK K ENE+KSS KD       GNV                 
Sbjct: 418  SKRKSAGDDGKVPNGAPAKKGKFENESKSSVKDEPTSTSRGNVPPKGSASLTTGSTPPTG 477

Query: 220  XXXXXXXXXPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQK 41
                      VT +EIRAVLLQ APVT QDLV KFK R+KS ED+ AFA+IL+RISK+QK
Sbjct: 478  P---------VTEDEIRAVLLQMAPVTTQDLVAKFKARLKSKEDKAAFAEILRRISKIQK 528

Query: 40   TNGPNKYVVLREK 2
            TNG N YVVLR+K
Sbjct: 529  TNGSN-YVVLRDK 540


>ref|XP_002519387.1| tfiif-alpha, putative [Ricinus communis] gi|223541454|gb|EEF43004.1|
            tfiif-alpha, putative [Ricinus communis]
          Length = 533

 Score =  597 bits (1538), Expect = e-167
 Identities = 330/541 (60%), Positives = 368/541 (68%), Gaps = 1/541 (0%)
 Frame = -1

Query: 1621 SFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYNV 1442
            + DL+LK  CSGCGS TDLYGSNCKHMTLCL+CGKTMAEN AKC DCGA V+RLIREYNV
Sbjct: 3    TMDLMLKGSCSGCGSTTDLYGSNCKHMTLCLSCGKTMAENHAKCFDCGATVSRLIREYNV 62

Query: 1441 RPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVLE 1262
            R S+SSDKNYFIGRFV+GLPSFSKKKN ENKW+L K+GLQGRQ++D LREKYKN+PW+LE
Sbjct: 63   RASSSSDKNYFIGRFVTGLPSFSKKKNAENKWSLQKEGLQGRQLTDALREKYKNRPWLLE 122

Query: 1261 DETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK 1082
            DETGQ Q+QGHLEGSQSATYYLL++  KEFVAIPA SWYNFNKVAQYKQLTLEEAEEKM+
Sbjct: 123  DETGQFQYQGHLEGSQSATYYLLILQGKEFVAIPASSWYNFNKVAQYKQLTLEEAEEKMR 182

Query: 1081 NRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRGX 902
            NRRKTADGYERWMMKAANNG AAFGEVEK DDK+S            GD++EGNVSDRG 
Sbjct: 183  NRRKTADGYERWMMKAANNGPAAFGEVEKLDDKDSGAASGRGRKKAAGDDEEGNVSDRGD 242

Query: 901  XXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVGN 722
                 EA RKNRL LN                           DWEHEEIFTDDDEAVGN
Sbjct: 243  EDEEEEAARKNRLGLNKRGGDDDEEGPRGGDHDIDDDDIEKGDDWEHEEIFTDDDEAVGN 302

Query: 721  DPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXG-RANGLNESXXXXXX 545
            D EEREDLAPEVPAPPEIKQ                          RA GLN+S      
Sbjct: 303  DREEREDLAPEVPAPPEIKQDEDDEDEENEEGGLSKSGKELKKLLGRAGGLNDSDAEDDD 362

Query: 544  XXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRKS 365
                      +  SPVLAPKQ  TPK EEPA+NSPAK               SAKGKRK 
Sbjct: 363  DDDDMDED--VSISPVLAPKQ--TPK-EEPADNSPAKPMTSASSKGTPSTSKSAKGKRKL 417

Query: 364  NGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXXXPVT 185
            N D+AK ++ AP KKVKTENE K + K+ +                            VT
Sbjct: 418  NSDEAKQTNVAPQKKVKTENELKPTVKEESAPTSKSSATPKAAPPSAKTGSTSP----VT 473

Query: 184  AEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYVVLRE 5
             EEIRAVLLQ  PVT QDLV +FK R+KS+ED++AFADIL+RISK+QKT+G + YVVLR+
Sbjct: 474  EEEIRAVLLQNGPVTTQDLVARFKSRLKSSEDKKAFADILRRISKIQKTSG-SSYVVLRD 532

Query: 4    K 2
            K
Sbjct: 533  K 533


>ref|XP_006380878.1| hypothetical protein POPTR_0006s01070g [Populus trichocarpa]
            gi|550335193|gb|ERP58675.1| hypothetical protein
            POPTR_0006s01070g [Populus trichocarpa]
          Length = 536

 Score =  593 bits (1530), Expect = e-166
 Identities = 330/545 (60%), Positives = 367/545 (67%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL L+P CSGCGS TDLYGSNCKHMTLCLTCGKTMAEN+ KC DCGA+VTRLIREYN
Sbjct: 1    MSFDLQLQPSCSGCGSTTDLYGSNCKHMTLCLTCGKTMAENRGKCFDCGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S SS+KNYFIGRFV+GLP FSKKKN ENKW+L K+G+ GRQ++DTLREK+KNKPW+L
Sbjct: 61   VRASTSSEKNYFIGRFVTGLPGFSKKKNAENKWSLLKEGIHGRQITDTLREKFKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSW--YNFNKVAQYKQLTLEEAEE 1091
            EDETGQ Q+QGHLEGSQSATYYLL+M  KEFVAIPAGSW  YNFNKVA YKQLTLEEAEE
Sbjct: 121  EDETGQFQYQGHLEGSQSATYYLLMMSGKEFVAIPAGSWYGYNFNKVAHYKQLTLEEAEE 180

Query: 1090 KMKNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGI-XXXXXXXXXGDEDEGNVS 914
            KMKNRRKTADGYERWMMKAA+NGAAAFGEVEK DDK+ V            GD+DEGNVS
Sbjct: 181  KMKNRRKTADGYERWMMKAAHNGAAAFGEVEKPDDKDGVSAGGRGGRKKANGDDDEGNVS 240

Query: 913  DRGXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE 734
            D+G      EA RK+RL LN                           DWEHEEIFTDDDE
Sbjct: 241  DKGEEDEEEEAGRKSRLGLNKGGGDDDEEGPRGGDLDMDDDDIEKGDDWEHEEIFTDDDE 300

Query: 733  AVGNDPEEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXX 557
            AV  DPEEREDLAPEVPAPPEIKQ                         G+ANGLNES  
Sbjct: 301  AVAIDPEEREDLAPEVPAPPEIKQDEEDEDEENEEGGLSKSGKELKKLLGKANGLNESDA 360

Query: 556  XXXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKG 377
                             SPVLAPKQKD   KEEPA+NSPAK               SAKG
Sbjct: 361  EDDDDDDDMDD----DISPVLAPKQKDAVPKEEPADNSPAKPTPPGSAKGTPSTSKSAKG 416

Query: 376  KRKSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXXXXX 197
            KRK N DDAK S+GAP+KK     E K + K+ +                          
Sbjct: 417  KRKLNADDAKTSNGAPVKK-----EVKPTVKEESSPATKGTATPKIMPSSSKTGPTSGPT 471

Query: 196  XPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYV 17
             PVT EEIRAVLLQ  PVT QDLV +FK R+++ ED++AFADIL+RISK+QKT+G N +V
Sbjct: 472  GPVTEEEIRAVLLQNGPVTTQDLVARFKSRLRTPEDKKAFADILRRISKIQKTSGSN-FV 530

Query: 16   VLREK 2
            VLR+K
Sbjct: 531  VLRDK 535


>ref|XP_010057855.1| PREDICTED: transcription initiation factor IIF subunit alpha isoform
            X1 [Eucalyptus grandis] gi|629110049|gb|KCW75195.1|
            hypothetical protein EUGRSUZ_E03951 [Eucalyptus grandis]
          Length = 543

 Score =  593 bits (1529), Expect = e-166
 Identities = 328/548 (59%), Positives = 371/548 (67%), Gaps = 7/548 (1%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LKP C GCG+  DLYGSNCKHMTLC TCGK MAE++AKC +CGA +TRLIREYN
Sbjct: 1    MSFDLVLKPTCGGCGAAADLYGSNCKHMTLCSTCGKAMAESRAKCYECGATLTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR   SS+KNYFIGRFVSGLP+FSKKK+ EN+W+  K+GLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRAGPSSEKNYFIGRFVSGLPNFSKKKSAENRWSAQKEGLQGRQVTDTLREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ+Q+ GHLEGSQSATYYLL++  KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYHGHLEGSQSATYYLLMLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESV------GIXXXXXXXXXGDEDEG 923
            KNR+KTADGY+RWMMKAANNGAAAFGEVEK +DK+        G          G++DEG
Sbjct: 181  KNRKKTADGYQRWMMKAANNGAAAFGEVEKSEDKDGSGGGSGGGGGGRGRKKTSGNDDEG 240

Query: 922  NVSDRGXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTD 743
            N SD+G      EA RK+RL LN                           DWEHEEIFTD
Sbjct: 241  NASDKGEEDEEEEAARKSRLGLNKRAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTD 300

Query: 742  DDEAVGNDPEEREDLAPEVPAPPEIK-QXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNE 566
            DDEAVGNDP EREDLAPE P PPEIK +                        GRA+G+N+
Sbjct: 301  DDEAVGNDPHEREDLAPEAPPPPEIKDEEEEDEANEEEGGLSKSGKELKKLLGRASGVND 360

Query: 565  SXXXXXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXS 386
            S               E+GFSPVLAPKQK+   KEEPAE SP+K               S
Sbjct: 361  S--DAEEDDDDEDMEDEVGFSPVLAPKQKEA-LKEEPAEESPSKPTPSASAKGTPPTSKS 417

Query: 385  AKGKRKSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXX 206
            AKGKRK NGDDAK+S+GAP KKVKTE E KSS KD ++                      
Sbjct: 418  AKGKRKLNGDDAKSSNGAPQKKVKTETEAKSSVKDESM-PTSKSSVASKATQSDSKSAST 476

Query: 205  XXXXPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPN 26
                PV  EEIRA +LQKAPVT QDLV KFK R+KS ED+ AFADIL+RISK+QKTNG +
Sbjct: 477  PPTGPVAEEEIRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNG-S 535

Query: 25   KYVVLREK 2
             YVVLREK
Sbjct: 536  SYVVLREK 543


>gb|KJB67331.1| hypothetical protein B456_010G186300 [Gossypium raimondii]
          Length = 532

 Score =  587 bits (1514), Expect = e-165
 Identities = 329/556 (59%), Positives = 371/556 (66%), Gaps = 15/556 (2%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LKP CSGCGS  DLYGSNCKHMTLC++CGKTMAEN+ KC +CGA+VTRLIREYN
Sbjct: 1    MSFDLMLKPSCSGCGSSQDLYGSNCKHMTLCVSCGKTMAENQGKCFECGAIVTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S S+DKNYFIGRF++GLP+FSKKKN EN+W+L KDGLQGRQV+D LREKYKNKPW+L
Sbjct: 61   VRASPSTDKNYFIGRFMTGLPNFSKKKNAENRWSLQKDGLQGRQVTDALREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQAQ+QG LEGSQSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQAQYQGQLEGSQSATYYLLMMQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNRRKTADGYERWMMKAANNGAAAFGEVEK D+KE+            G+E+EG+VSDRG
Sbjct: 181  KNRRKTADGYERWMMKAANNGAAAFGEVEKIDEKETAAAGGRGRKKSTGEEEEGHVSDRG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDE--- 734
                  EA RKNRL LN                                ++  DDD+   
Sbjct: 241  EEDEEEEAARKNRLGLNKKSGDDDEEGPRGG------------------DLDMDDDDIEK 282

Query: 733  AVGNDPEEREDLAPEVPAPPEIKQXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXX 554
            AVGNDPEER DLAPEVPAPPEIK+                        G+A+GLN+S   
Sbjct: 283  AVGNDPEER-DLAPEVPAPPEIKEDEDEEDEEQEGGLSKSGKELKKLLGKASGLNDS--D 339

Query: 553  XXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGK 374
                        +M F+P  APKQKD P KEEPA+NSP K               S+KGK
Sbjct: 340  ADEDDDDEDVDDDMNFNPTPAPKQKDAP-KEEPADNSPMKPAPSASARGTPAASKSSKGK 398

Query: 373  RKSNGDDAKASSGAPLKKVKTENETKSSAKDGN------------VXXXXXXXXXXXXXX 230
            RK  GDD KAS+G PLKKVK+E E+K+S K+ N                           
Sbjct: 399  RK--GDDTKASNGTPLKKVKSEPESKTSVKEENTSASKGSAPSKGTSSSAKAGSTSAASA 456

Query: 229  XXXXXXXXXXXXPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISK 50
                        PVT EEIRAVLLQKAPVT  DLV KFK R+KS ED++AFADIL+RISK
Sbjct: 457  SSSKAGSASTAGPVTEEEIRAVLLQKAPVTTSDLVAKFKARLKSPEDKKAFADILRRISK 516

Query: 49   LQKTNGPNKYVVLREK 2
            +QKTNGPN YVVLREK
Sbjct: 517  IQKTNGPNNYVVLREK 532


>ref|XP_010057857.1| PREDICTED: transcription initiation factor IIF subunit alpha isoform
            X2 [Eucalyptus grandis] gi|629110050|gb|KCW75196.1|
            hypothetical protein EUGRSUZ_E03951 [Eucalyptus grandis]
          Length = 538

 Score =  580 bits (1494), Expect = e-162
 Identities = 324/548 (59%), Positives = 367/548 (66%), Gaps = 7/548 (1%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MSFDL+LKP C GCG+  DLYGSNCKHMTLC TCGK MAE++AKC +CGA +TRLIREYN
Sbjct: 1    MSFDLVLKPTCGGCGAAADLYGSNCKHMTLCSTCGKAMAESRAKCYECGATLTRLIREYN 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR   SS+KNYFIGRFVSGLP+FSKKK+ EN+W+  K+GLQGRQV+DTLREKYKNKPW+L
Sbjct: 61   VRAGPSSEKNYFIGRFVSGLPNFSKKKSAENRWSAQKEGLQGRQVTDTLREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ+Q+ GHLEGSQSATYYLL++  KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQYHGHLEGSQSATYYLLMLQGKEFAAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESV------GIXXXXXXXXXGDEDEG 923
            KNR+KTADGY+RWMMKAANNGAAAFGEVEK +DK+        G          G++DEG
Sbjct: 181  KNRKKTADGYQRWMMKAANNGAAAFGEVEKSEDKDGSGGGSGGGGGGRGRKKTSGNDDEG 240

Query: 922  NVSDRGXXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTD 743
            N SD+G      EA RK+RL LN                           DWEHEEIFTD
Sbjct: 241  NASDKGEEDEEEEAARKSRLGLNKRAGDDDEEGPRGGDLDLDDDDIEKGDDWEHEEIFTD 300

Query: 742  DDEAVGNDPEEREDLAPEVPAPPEIK-QXXXXXXXXXXXXXXXXXXXXXXXXGRANGLNE 566
            DDEAVGNDP EREDLAPE P PPEIK +                        GRA+G+N+
Sbjct: 301  DDEAVGNDPHEREDLAPEAPPPPEIKDEEEEDEANEEEGGLSKSGKELKKLLGRASGVND 360

Query: 565  SXXXXXXXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXS 386
            S               E+GFSPVLAPKQK+   KEEPAE SP+K               S
Sbjct: 361  S--DAEEDDDDEDMEDEVGFSPVLAPKQKEA-LKEEPAEESPSKPTPSASAKGTPPTSKS 417

Query: 385  AKGKRKSNGDDAKASSGAPLKKVKTENETKSSAKDGNVXXXXXXXXXXXXXXXXXXXXXX 206
            AKGKRK NGDDAK+S+GAP KK     E KSS KD ++                      
Sbjct: 418  AKGKRKLNGDDAKSSNGAPQKK-----EAKSSVKDESM-PTSKSSVASKATQSDSKSAST 471

Query: 205  XXXXPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPN 26
                PV  EEIRA +LQKAPVT QDLV KFK R+KS ED+ AFADIL+RISK+QKTNG +
Sbjct: 472  PPTGPVAEEEIRAFILQKAPVTTQDLVAKFKARLKSPEDKNAFADILRRISKIQKTNG-S 530

Query: 25   KYVVLREK 2
             YVVLREK
Sbjct: 531  SYVVLREK 538


>ref|XP_007154011.1| hypothetical protein PHAVU_003G083500g [Phaseolus vulgaris]
            gi|561027365|gb|ESW26005.1| hypothetical protein
            PHAVU_003G083500g [Phaseolus vulgaris]
          Length = 540

 Score =  579 bits (1493), Expect = e-162
 Identities = 320/545 (58%), Positives = 364/545 (66%), Gaps = 4/545 (0%)
 Frame = -1

Query: 1624 MSFDLLLKPQCSGCGSQTDLYGSNCKHMTLCLTCGKTMAENKAKCCDCGALVTRLIREYN 1445
            MS DLLLKP C GCGS TDLYGSNCKHMTLCLTCGKTMAENKAKC DCGA VTRLIREY+
Sbjct: 1    MSIDLLLKPTCGGCGSTTDLYGSNCKHMTLCLTCGKTMAENKAKCFDCGATVTRLIREYS 60

Query: 1444 VRPSASSDKNYFIGRFVSGLPSFSKKKNDENKWTLYKDGLQGRQVSDTLREKYKNKPWVL 1265
            VR S+ SDK+YFIGRFVSGLP FSKKK+ ENKW+L K+GLQ RQV+D LREKYKNKPW+L
Sbjct: 61   VRASSGSDKHYFIGRFVSGLPDFSKKKSAENKWSLQKEGLQSRQVTDALREKYKNKPWLL 120

Query: 1264 EDETGQAQFQGHLEGSQSATYYLLVMHSKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 1085
            EDETGQ+QFQGHLEG+QSATYYLL+M  KEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
Sbjct: 121  EDETGQSQFQGHLEGAQSATYYLLMMERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM 180

Query: 1084 KNRRKTADGYERWMMKAANNGAAAFGEVEKHDDKESVGIXXXXXXXXXGDEDEGNVSDRG 905
            KNR+KTADGYERWMMKAANNG AAFGE  + D+KES             +++EG+VSD+G
Sbjct: 181  KNRKKTADGYERWMMKAANNGPAAFGERGRFDEKESNVGGGGKNRKKTDEDEEGHVSDKG 240

Query: 904  XXXXXXEAQRKNRLELNXXXXXXXXXXXXXXXXXXXXXXXXXXXDWEHEEIFTDDDEAVG 725
                  E  R++RL LN                           DWEHEEIFTDDDEAVG
Sbjct: 241  EEDEDDEVARRSRLGLNKKGGDDDEEGPRGGDLDQDDDDIEKGDDWEHEEIFTDDDEAVG 300

Query: 724  NDPEEREDLAPEVPAPPEIKQ-XXXXXXXXXXXXXXXXXXXXXXXXGRANGLNESXXXXX 548
            NDPEEREDLAPEVPAPPEIKQ                          R +GLNES     
Sbjct: 301  NDPEEREDLAPEVPAPPEIKQDDEDEDEDNEEGGGLSKSGKELKKLLRTSGLNES--DAE 358

Query: 547  XXXXXXXXXXEMGFSPVLAPKQKDTPKKEEPAENSPAKXXXXXXXXXXXXXXXSAKGKRK 368
                      E G  PV+A K KD P KEEPA+NSP+K                +KGKRK
Sbjct: 359  DDDDDDDVDDEAGVPPVIASKPKDAP-KEEPADNSPSKPAVTGTARGTLSTSKPSKGKRK 417

Query: 367  SNGDDAKASSGAPLKKVKTENETKSSAKDGN---VXXXXXXXXXXXXXXXXXXXXXXXXX 197
             N ++ KA++GAP KKVK ENE KS+ KD N                             
Sbjct: 418  LN-EETKAANGAPPKKVKIENEPKSTVKDENGSTSKNNTPSKGVPPTPSSKGGSSSPIAS 476

Query: 196  XPVTAEEIRAVLLQKAPVTAQDLVDKFKPRIKSTEDRRAFADILKRISKLQKTNGPNKYV 17
             PV+ EEIRAVL+QK P+T QDLV KF+ R++  ED++AFADILKRISK+QKTN  + YV
Sbjct: 477  GPVSEEEIRAVLMQKTPLTTQDLVAKFRARLRCPEDKKAFADILKRISKIQKTNA-SSYV 535

Query: 16   VLREK 2
            +LR++
Sbjct: 536  ILRDR 540