BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00003341
         (1604 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO72358.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   619   e-174
gb|KDO72351.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   619   e-174
ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron sp...   618   e-174
gb|KDO72355.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   575   e-161
ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron sp...   573   e-160
gb|KDO72356.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   566   e-158
ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron sp...   565   e-158
gb|KDO72359.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   555   e-155
gb|KDO72354.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   555   e-155
ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron sp...   553   e-154
ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citr...   508   e-141
gb|KDO72357.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   502   e-139
ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron sp...   500   e-138
gb|KDO72360.1| hypothetical protein CISIN_1g001441mg [Citrus sin...   390   e-105
ref|XP_007031356.1| CRM family member 2, putative isoform 2 [The...   333   3e-88
ref|XP_007031355.1| CRM family member 2, putative isoform 1 [The...   333   3e-88
ref|XP_012483758.1| PREDICTED: chloroplastic group IIA intron sp...   325   7e-86
ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prun...   325   7e-86
ref|XP_008230671.1| PREDICTED: chloroplastic group IIA intron sp...   324   1e-85
ref|XP_008230670.1| PREDICTED: chloroplastic group IIA intron sp...   324   1e-85

>gb|KDO72358.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1013

 Score =  619 bits (1597), Expect = e-174
 Identities = 354/534 (66%), Positives = 395/534 (73%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI I+E ES+SSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 850  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 878

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 879  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 915

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 916  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 957


>gb|KDO72351.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
            gi|641853534|gb|KDO72352.1| hypothetical protein
            CISIN_1g001441mg [Citrus sinensis]
            gi|641853535|gb|KDO72353.1| hypothetical protein
            CISIN_1g001441mg [Citrus sinensis]
          Length = 1076

 Score =  619 bits (1597), Expect = e-174
 Identities = 354/534 (66%), Positives = 395/534 (73%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI I+E ES+SSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 850  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 878

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 879  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 915

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 916  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 957


>ref|XP_006482476.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Citrus sinensis]
            gi|568857850|ref|XP_006482477.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X2 [Citrus sinensis]
          Length = 1076

 Score =  618 bits (1593), Expect = e-174
 Identities = 353/534 (66%), Positives = 394/534 (73%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSR                    P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRALEKKAEAEKLLAELEEET-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI I+E ES+SSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 850  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 878

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 879  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 915

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 916  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 957


>gb|KDO72355.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1050

 Score =  575 bits (1482), Expect = e-161
 Identities = 336/534 (62%), Positives = 374/534 (70%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HN                          DF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHN--------------------------DFFAEG 823

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 824  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 852

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 853  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 889

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 890  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 931


>ref|XP_006482479.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X4 [Citrus sinensis]
          Length = 1050

 Score =  573 bits (1478), Expect = e-160
 Identities = 335/534 (62%), Positives = 373/534 (69%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSR                    P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRALEKKAEAEKLLAELEEET-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HN                          DF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHN--------------------------DFFAEG 823

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 824  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 852

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 853  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 889

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 890  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 931


>gb|KDO72356.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1045

 Score =  567 bits (1460), Expect = e-158
 Identities = 333/534 (62%), Positives = 370/534 (69%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNG                               
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNG------------------------------- 818

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 819  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 847

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 848  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 884

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 885  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 926


>ref|XP_006482480.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X5 [Citrus sinensis]
          Length = 1045

 Score =  565 bits (1456), Expect = e-158
 Identities = 332/534 (62%), Positives = 369/534 (69%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSR                    P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRALEKKAEAEKLLAELEEET-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+T  E
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTST--E 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNG                               
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNG------------------------------- 818

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM   QEVMEYNT VDAE CS                            
Sbjct: 819  VASGTSSCPDNSM---QEVMEYNTIVDAEQCS---------------------------- 847

Query: 344  SLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXX 165
                        SD+EP + S+ESAK+ S   ++NEPIE S E AK  S  S        
Sbjct: 848  ------------SDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLS-------- 884

Query: 164  XXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
                        TPIG  N WNEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 885  ------------TPIGTGNVWNENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 926


>gb|KDO72359.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 965

 Score =  555 bits (1429), Expect = e-155
 Identities = 307/433 (70%), Positives = 346/433 (79%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+  TE
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTS--TE 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI I+E ES+SSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM                 CS DN P ESS+ES+K  S   S++EPIE 
Sbjct: 850  VASGTSSCPDNSM-----------------CSSDNEPRESSIESAKSRS---SENEPIEQ 889

Query: 344  SLESAKTISEFSS 306
            S E AK  S  S+
Sbjct: 890  SFELAKGRSGLST 902


>gb|KDO72354.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1062

 Score =  555 bits (1429), Expect = e-155
 Identities = 307/433 (70%), Positives = 346/433 (79%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+  TE
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTS--TE 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI I+E ES+SSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM                 CS DN P ESS+ES+K  S   S++EPIE 
Sbjct: 850  VASGTSSCPDNSM-----------------CSSDNEPRESSIESAKSRS---SENEPIEQ 889

Query: 344  SLESAKTISEFSS 306
            S E AK  S  S+
Sbjct: 890  SFELAKGRSGLST 902


>ref|XP_006482478.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X3 [Citrus sinensis]
          Length = 1062

 Score =  553 bits (1425), Expect = e-154
 Identities = 306/433 (70%), Positives = 345/433 (79%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSR                    P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRALEKKAEAEKLLAELEEET-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+  TE
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTS--TE 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI I+E ES+SSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISINEIESKSSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM                 CS DN P ESS+ES+K  S   S++EPIE 
Sbjct: 850  VASGTSSCPDNSM-----------------CSSDNEPRESSIESAKSRS---SENEPIEQ 889

Query: 344  SLESAKTISEFSS 306
            S E AK  S  S+
Sbjct: 890  SFELAKGRSGLST 902


>ref|XP_006431007.1| hypothetical protein CICLE_v10013715mg [Citrus clementina]
            gi|557533064|gb|ESR44247.1| hypothetical protein
            CICLE_v10013715mg [Citrus clementina]
          Length = 1062

 Score =  508 bits (1307), Expect = e-141
 Identities = 290/433 (66%), Positives = 324/433 (74%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQ + +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQTSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRTSIRLSR                    P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTSIRLSRALEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLV   I  M        +  + +  +AR E GADLT+  TE
Sbjct: 733  LVKDKEANSLETIDESILPLVGSIIFLMIWKSSNIPEIVFGIFFKARGECGADLTS--TE 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNGI  +E ESESSL+ VSKE Q NMIADF+AE 
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNGISFNEIESESSLKSVSKESQLNMIADFFAEG 849

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG+ SC DNSM                 CS DN P ESS+ES+K  S   S++EPIE 
Sbjct: 850  VASGTPSCPDNSM-----------------CSSDNEPRESSIESAKSRS---SENEPIEQ 889

Query: 344  SLESAKTISEFSS 306
              E AK  S  S+
Sbjct: 890  CFELAKGRSGLST 902



 Score = 94.0 bits (232), Expect = 3e-16
 Identities = 66/153 (43%), Positives = 82/153 (53%), Gaps = 1/153 (0%)
 Frame = -1

Query: 458  NTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEVSLESA-KTISEFSSDDEPIKVS 282
            +  +D       +   ES   +    +E+ S+     VS ES    I++F +  E +   
Sbjct: 796  DATIDGPPAIQQDKQTESLTHNGISFNEIESESSLKSVSKESQLNMIADFFA--EGVASG 853

Query: 281  LESAKTISEFSTDNEPIELSLESAKTISEFSSDNEPTXXXXXXXXXXXXXSTPIGIQNGW 102
              S    S  S+DNEP E S+ESAK+ S   S+NEP              STPIG  N W
Sbjct: 854  TPSCPDNSMCSSDNEPRESSIESAKSRS---SENEPIEQCFELAKGRSGLSTPIGTGNVW 910

Query: 101  NENTSRTVQLSNRDRLLLRKQALRMKKCPVLAV 3
            NEN SR +QLSNRDRLLLRKQALRMKK PVLAV
Sbjct: 911  NENNSRAIQLSNRDRLLLRKQALRMKKRPVLAV 943


>gb|KDO72357.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 1031

 Score =  502 bits (1292), Expect = e-139
 Identities = 286/433 (66%), Positives = 321/433 (74%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+  TE
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTS--TE 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNG                               
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNG------------------------------- 818

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM                 CS DN P ESS+ES+K  S   S++EPIE 
Sbjct: 819  VASGTSSCPDNSM-----------------CSSDNEPRESSIESAKSRS---SENEPIEQ 858

Query: 344  SLESAKTISEFSS 306
            S E AK  S  S+
Sbjct: 859  SFELAKGRSGLST 871



 Score = 90.1 bits (222), Expect = 5e-15
 Identities = 52/83 (62%), Positives = 57/83 (68%)
 Frame = -1

Query: 251  STDNEPIELSLESAKTISEFSSDNEPTXXXXXXXXXXXXXSTPIGIQNGWNENTSRTVQL 72
            S+DNEP E S+ESAK+ S   S+NEP              STPIG  N WNEN SR +QL
Sbjct: 833  SSDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQL 889

Query: 71   SNRDRLLLRKQALRMKKCPVLAV 3
            SNRDRLLLRKQALRMKK PVLAV
Sbjct: 890  SNRDRLLLRKQALRMKKRPVLAV 912


>ref|XP_006482481.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X6 [Citrus sinensis]
          Length = 1031

 Score =  500 bits (1288), Expect = e-138
 Identities = 285/433 (65%), Positives = 320/433 (73%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSR                    P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRALEKKAEAEKLLAELEEET-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E N +ET+DESILPLVKEEIG+MQ A+CMRSD+S++VNV+AR E GADLT+  TE
Sbjct: 733  LVKDKEANSLETIDESILPLVKEEIGDMQPAECMRSDTSHEVNVQARGECGADLTS--TE 790

Query: 704  SNDPMDATIDGPLATQQDKQTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAED 525
            SND  DATIDGP A QQDKQT+ SL HNG                               
Sbjct: 791  SNDTGDATIDGPPAIQQDKQTE-SLTHNG------------------------------- 818

Query: 524  VASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEV 345
            VASG++SC DNSM                 CS DN P ESS+ES+K  S   S++EPIE 
Sbjct: 819  VASGTSSCPDNSM-----------------CSSDNEPRESSIESAKSRS---SENEPIEQ 858

Query: 344  SLESAKTISEFSS 306
            S E AK  S  S+
Sbjct: 859  SFELAKGRSGLST 871



 Score = 90.1 bits (222), Expect = 5e-15
 Identities = 52/83 (62%), Positives = 57/83 (68%)
 Frame = -1

Query: 251  STDNEPIELSLESAKTISEFSSDNEPTXXXXXXXXXXXXXSTPIGIQNGWNENTSRTVQL 72
            S+DNEP E S+ESAK+ S   S+NEP              STPIG  N WNEN SR +QL
Sbjct: 833  SSDNEPRESSIESAKSRS---SENEPIEQSFELAKGRSGLSTPIGTGNVWNENNSRAIQL 889

Query: 71   SNRDRLLLRKQALRMKKCPVLAV 3
            SNRDRLLLRKQALRMKK PVLAV
Sbjct: 890  SNRDRLLLRKQALRMKKRPVLAV 912


>gb|KDO72360.1| hypothetical protein CISIN_1g001441mg [Citrus sinensis]
          Length = 770

 Score =  390 bits (1003), Expect = e-105
 Identities = 204/261 (78%), Positives = 224/261 (85%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            E+ + EFSTSNDS+EEPEL N  +NSGD+    T+DEF CTNDQK+ +HSEQKE+RSAEV
Sbjct: 498  ERRKHEFSTSNDSKEEPELGNRHDNSGDN----TQDEFGCTNDQKSTMHSEQKERRSAEV 553

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIRRT+IRLSRV                   P+Q+EVDKEGITEEERYMLRKVGLRMKAF
Sbjct: 554  AIRRTNIRLSRVLEKKAEAEKLLAELEEER-PEQYEVDKEGITEEERYMLRKVGLRMKAF 612

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGTVENMHLHWK+RELVK+ISKQR IEAALQEARTLE ESGGILVAVERV 
Sbjct: 613  LLMGRRGVFDGTVENMHLHWKHRELVKIISKQRKIEAALQEARTLEVESGGILVAVERVN 672

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAII+YRGKNYERP CLRPKTLLTKREAMKRSLEAQRRQSLKLHVLEL RN+EKLKLQ
Sbjct: 673  KGYAIILYRGKNYERPACLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELTRNIEKLKLQ 732

Query: 884  LVKDEEGNGIETVDESILPLV 822
            LVKD+E N +ET+DESILPLV
Sbjct: 733  LVKDKEANSLETIDESILPLV 753


>ref|XP_007031356.1| CRM family member 2, putative isoform 2 [Theobroma cacao]
            gi|508710385|gb|EOY02282.1| CRM family member 2, putative
            isoform 2 [Theobroma cacao]
          Length = 1045

 Score =  333 bits (853), Expect = 3e-88
 Identities = 206/442 (46%), Positives = 278/442 (62%), Gaps = 7/442 (1%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            EK+  E S S  + +E  + +T++ S     S+         DQ++    + K  +SAE 
Sbjct: 493  EKQGAECSKSKKTAQEVIVEDTKSGSESKINSA--------KDQRSNFFGDPKNMKSAEA 544

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIR+T ++LS                   EIPQQ E+DKEGIT+EERYMLRKVGLRMK F
Sbjct: 545  AIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPF 604

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LL+GRRGVFDGTVENMHLHWKYRELVK+ISK+ ++EA  Q AR LEAESGGILVAVERV 
Sbjct: 605  LLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVS 664

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAIIVYRGKNYERP  LRP+TLLTKR+AMKRSLE QRR+SLKLH+L L RNV  L+ Q
Sbjct: 665  KGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQ 724

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQ----LAKCMRSDSSYDVNVEAREERGADLTT 717
            LV D+E N ++TV++S LPLV+EE+  +Q        +   +S   +VE+R++ G++ T+
Sbjct: 725  LVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECPASSGGHVESRDKDGSESTS 784

Query: 716  TDTESNDPMDATIDGPLATQQDKQTDF---SLMHNGIRISETESESSLEYVSKEYQANMI 546
                 ND M ATI    + +Q  + +F   S +H+G    +TESE S E V+++  A  +
Sbjct: 785  M---KNDKMVATI----SIRQPSKQEFMEPSSIHDGFENHKTESEFSAESVNRKSHATEL 837

Query: 545  ADFYAEDVASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLS 366
               + + V     S  DN M    E ++ + A++AEH   +N P+ES +ES+  +   +S
Sbjct: 838  RALHTQ-VEMVDTSYPDNLM----EEIDDSGAINAEHGVSNNGPMESLVESASMLDVSIS 892

Query: 365  DDEPIEVSLESAKTISEFSSDD 300
                  VS + A T +  S+ D
Sbjct: 893  SAVE-NVSNKMASTANFLSNKD 913


>ref|XP_007031355.1| CRM family member 2, putative isoform 1 [Theobroma cacao]
            gi|508710384|gb|EOY02281.1| CRM family member 2, putative
            isoform 1 [Theobroma cacao]
          Length = 1087

 Score =  333 bits (853), Expect = 3e-88
 Identities = 206/442 (46%), Positives = 278/442 (62%), Gaps = 7/442 (1%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            EK+  E S S  + +E  + +T++ S     S+         DQ++    + K  +SAE 
Sbjct: 535  EKQGAECSKSKKTAQEVIVEDTKSGSESKINSA--------KDQRSNFFGDPKNMKSAEA 586

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
            AIR+T ++LS                   EIPQQ E+DKEGIT+EERYMLRKVGLRMK F
Sbjct: 587  AIRKTDVKLSMALEKKAKAEKLLAELEQAEIPQQSEIDKEGITQEERYMLRKVGLRMKPF 646

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LL+GRRGVFDGTVENMHLHWKYRELVK+ISK+ ++EA  Q AR LEAESGGILVAVERV 
Sbjct: 647  LLLGRRGVFDGTVENMHLHWKYRELVKIISKETNVEAVHQLARMLEAESGGILVAVERVS 706

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAIIVYRGKNYERP  LRP+TLLTKR+AMKRSLE QRR+SLKLH+L L RNV  L+ Q
Sbjct: 707  KGYAIIVYRGKNYERPTSLRPQTLLTKRQAMKRSLEEQRRKSLKLHILNLTRNVNDLEHQ 766

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQ----LAKCMRSDSSYDVNVEAREERGADLTT 717
            LV D+E N ++TV++S LPLV+EE+  +Q        +   +S   +VE+R++ G++ T+
Sbjct: 767  LVVDKEANSMQTVEQSSLPLVQEELETLQSVEYTGSVIECPASSGGHVESRDKDGSESTS 826

Query: 716  TDTESNDPMDATIDGPLATQQDKQTDF---SLMHNGIRISETESESSLEYVSKEYQANMI 546
                 ND M ATI    + +Q  + +F   S +H+G    +TESE S E V+++  A  +
Sbjct: 827  M---KNDKMVATI----SIRQPSKQEFMEPSSIHDGFENHKTESEFSAESVNRKSHATEL 879

Query: 545  ADFYAEDVASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCISELLS 366
               + + V     S  DN M    E ++ + A++AEH   +N P+ES +ES+  +   +S
Sbjct: 880  RALHTQ-VEMVDTSYPDNLM----EEIDDSGAINAEHGVSNNGPMESLVESASMLDVSIS 934

Query: 365  DDEPIEVSLESAKTISEFSSDD 300
                  VS + A T +  S+ D
Sbjct: 935  SAVE-NVSNKMASTANFLSNKD 955


>ref|XP_012483758.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Gossypium raimondii]
            gi|763766497|gb|KJB33712.1| hypothetical protein
            B456_006G027700 [Gossypium raimondii]
          Length = 1023

 Score =  325 bits (833), Expect = 7e-86
 Identities = 194/417 (46%), Positives = 258/417 (61%)
 Frame = -1

Query: 1547 RNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEVAIRRTSIRLSRVXXXXXXX 1368
            +  Q   G+  + ++E++     D+K+ + S +K   SAE  I+RTS +LS         
Sbjct: 493  KTMQEVHGEGAKIASENDINSAKDRKSDVFSIRKNLNSAEATIKRTSSKLSMALEKKAKA 552

Query: 1367 XXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFDGTVENMHLH 1188
                       IPQQ E+DKEGIT EERYMLRKVGLRMK FLL+GRRGVFDGTVENMHLH
Sbjct: 553  EKLLAELEQEVIPQQSEIDKEGITREERYMLRKVGLRMKPFLLLGRRGVFDGTVENMHLH 612

Query: 1187 WKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVIRGYAIIVYRGKNYERPECL 1008
            WKYRELVK+ISK+ ++EA  QEA+ LEAESGGILVAVERV +GYAII YRGKNYERP CL
Sbjct: 613  WKYRELVKIISKETNVEAVHQEAQILEAESGGILVAVERVSKGYAIIFYRGKNYERPTCL 672

Query: 1007 RPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQLVKDEEGNGIETVDESILP 828
            RP+TLLTKREAMKRSLE QRR+SLKLH+L+L RN+++LK QLV D+E +     D+S LP
Sbjct: 673  RPQTLLTKREAMKRSLEEQRRKSLKLHILKLTRNIDELKHQLVVDKEASNTLAADQSRLP 732

Query: 827  LVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTESNDPMDATIDGPLATQQDK 648
             V+EE+  +Q  KC RSD  Y  + E   E   D + + +  ND M A +     ++Q  
Sbjct: 733  SVEEEMETLQSVKCARSDIEYHASPEGHLE-AKDKSESTSMKNDRMVAAVSISEPSEQ-V 790

Query: 647  QTDFSLMHNGIRISETESESSLEYVSKEYQANMIADFYAEDVASGSASCLDNSMGFQQEV 468
              + S +H+G+   +TE E S E V++      +   +++     S+S  DN M      
Sbjct: 791  LVEPSSIHDGVENHKTEPEFSSESVNRRKHNTELRALHSQFEMVESSSHHDNLM------ 844

Query: 467  MEYNTAVDAEHCSYDNVPVESSLESSKCISELLSDDEPIEVSLESAKTISEFSSDDE 297
                     E  +Y+N P+ES +ES+    ++L       VS + A T ++F S+ E
Sbjct: 845  ---------EENAYNNGPMESMVESASKNLDVLISPAADNVSNKMAST-AKFLSNKE 891


>ref|XP_007217083.1| hypothetical protein PRUPE_ppa000515mg [Prunus persica]
            gi|462413233|gb|EMJ18282.1| hypothetical protein
            PRUPE_ppa000515mg [Prunus persica]
          Length = 1117

 Score =  325 bits (833), Expect = 7e-86
 Identities = 226/564 (40%), Positives = 302/564 (53%), Gaps = 30/564 (5%)
 Frame = -1

Query: 1604 EKERIEFSTSNDSEEEPELRNTQNNSGDDFESSTEDEFVCTNDQKNILHSEQKEQRSAEV 1425
            EK+  E  TS  + +E E R    N  +            TND K  L S +++ +SAEV
Sbjct: 487  EKQIAEHGTSVTTRQELEPRTEPENKHE-----------WTNDHKMGLPSAKRKLKSAEV 535

Query: 1424 AIRRTSIRLSRVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAF 1245
             + RTSI+LS                    IPQQ E+DKEGIT+EERYMLRKVGLRMK F
Sbjct: 536  VVNRTSIKLSMALEKKAKAEKLLAELENAAIPQQPEIDKEGITKEERYMLRKVGLRMKPF 595

Query: 1244 LLMGRRGVFDGTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVI 1065
            LLMGRRGVFDGT+ENMHLHWKYRELVK+I  ++SIEA  Q A+TLEAESGGILVAVERV 
Sbjct: 596  LLMGRRGVFDGTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVS 655

Query: 1064 RGYAIIVYRGKNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQ 885
            +GYAIIVYRGKNY RP  LRP+TLL KREAMKRS+EAQRR+SLKLHVL L  N+++LKL 
Sbjct: 656  KGYAIIVYRGKNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLL 715

Query: 884  LVKDEEGNGIETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTE 705
            LVKD+E + +++V ES                          N  AR+++ A +T  +  
Sbjct: 716  LVKDKEADNLQSVGES-------------------------RNELARDKQEAHVTPVNL- 749

Query: 704  SNDPMDATIDGPLATQQDKQTDF-------------------SLMHNGIRISETESESSL 582
             ND M A ++G LATQQD+   F                   S+ +    I + E   S 
Sbjct: 750  -NDGMGAVVNGQLATQQDEVISFSSTWDEDEIGKFKPGSSNESVTNEEDEIGKVEPGPSN 808

Query: 581  EYVSKEYQANMIADFYAEDVASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDN------ 420
            E V+ E  AN + D   E V    ++C      F ++VM      +  H  +        
Sbjct: 809  ESVTNETPANFLKDTNGE-VGDFVSTC------FPEDVMPAGVISEIVHVLFFKGRGKQE 861

Query: 419  ---VPVESSLESSKCISELLSDDEPIEVSLESAKTISEFSSDDEPIKVS-LESAKTISEF 252
                P++ +      ++  L+  +      +   T S    +DE  +V  + S++ ++  
Sbjct: 862  AHVTPMKLNDGMGTIVNGQLATQQ------DKVITFSSICCEDENGEVEPISSSEPVTNE 915

Query: 251  STDNEPIELSLESAKTIS-EFSSDNEPTXXXXXXXXXXXXXSTPIGIQNGWNENTSRTVQ 75
            +  N   +++ E   +IS  F  D                 S P+ ++  +NE   ++V 
Sbjct: 916  THANLFRDVNGEEGVSISTSFPEDAMAKDSSGRFGNSESEPSVPVMVRKDFNERPLKSVH 975

Query: 74   LSNRDRLLLRKQALRMKKCPVLAV 3
            LSN +RLLLRKQAL+MKK PVLAV
Sbjct: 976  LSNGERLLLRKQALKMKKRPVLAV 999


>ref|XP_008230671.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X2 [Prunus mume]
          Length = 1109

 Score =  324 bits (831), Expect = 1e-85
 Identities = 226/545 (41%), Positives = 293/545 (53%), Gaps = 23/545 (4%)
 Frame = -1

Query: 1568 SEEEPELRNTQNNSGDDFESSTEDE--FVCTNDQKNILHSEQKEQRSAEVAIRRTSIRLS 1395
            +E++   R T   +  + E  TE E     TND K  L S +++ +SAEV + RTSI+LS
Sbjct: 486  AEKQIAERGTSVTTRQELEPRTEPENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLS 545

Query: 1394 RVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 1215
                                IPQQ E DKEGIT+EERYMLRKVGLRMK FLLMGRRGVFD
Sbjct: 546  MALEKKAKAEKLLAELENAAIPQQPETDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFD 605

Query: 1214 GTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVIRGYAIIVYRG 1035
            GT+ENMHLHWKYRELVK+I  ++SIEA  Q A+TLEAESGGILVAVERV +GYAIIVYRG
Sbjct: 606  GTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRG 665

Query: 1034 KNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQLVKDEEGNGI 855
            KNY RP  LRP+TLL KREAMKRS+EAQRR+SLKLHVL L  N+++LKL LVKD+E + +
Sbjct: 666  KNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKDKEADNM 725

Query: 854  ETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTESNDPMDATID 675
            ++V ES   L +++                    EAR         T    ND M A ++
Sbjct: 726  QSVGESRNELARDK-------------------QEAR--------VTPVNLNDGMGAVVN 758

Query: 674  GPLATQQDKQTDFSLMHNGIRISETESESS-------------------LEYVSKEYQAN 552
            G LATQQD+   FS   +   I + E  SS                    E V+ E  AN
Sbjct: 759  GQLATQQDEVISFSSTWDEDEIGKFEPGSSDESVTNEEDEIGKVGPGPSNESVTNETHAN 818

Query: 551  MIADFYAEDVASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCI--S 378
             + D   E V    ++C    +  + +   + T +         V  + + +  K I  S
Sbjct: 819  FLKDTNGE-VGDFVSTCFPEDVMGRGKQEAHVTPMKLNDGMGTIVNGQLATQQDKVITFS 877

Query: 377  ELLSDDEPIEVSLESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTIS 198
             +  +DE  EV         E  S  EP  V+ E+   + +     E + +S    +   
Sbjct: 878  SICCEDENGEV---------EPVSSSEP--VTNETHANLFKDVNGEEGVSISTSFPEDAM 926

Query: 197  EFSSDNEPTXXXXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRMKKC 18
               S+ E               S P+ ++  +N   S++V LSN +RLLLRKQAL+MKK 
Sbjct: 927  HRVSEIEAKDSSGRFGNSESKPSVPVMVRKDFNGRPSKSVHLSNGERLLLRKQALKMKKR 986

Query: 17   PVLAV 3
            PVLAV
Sbjct: 987  PVLAV 991


>ref|XP_008230670.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic isoform X1 [Prunus mume]
          Length = 1122

 Score =  324 bits (831), Expect = 1e-85
 Identities = 227/548 (41%), Positives = 301/548 (54%), Gaps = 26/548 (4%)
 Frame = -1

Query: 1568 SEEEPELRNTQNNSGDDFESSTEDE--FVCTNDQKNILHSEQKEQRSAEVAIRRTSIRLS 1395
            +E++   R T   +  + E  TE E     TND K  L S +++ +SAEV + RTSI+LS
Sbjct: 486  AEKQIAERGTSVTTRQELEPRTEPENKHEWTNDHKMGLPSAKRKLKSAEVVVNRTSIKLS 545

Query: 1394 RVXXXXXXXXXXXXXXXXXEIPQQFEVDKEGITEEERYMLRKVGLRMKAFLLMGRRGVFD 1215
                                IPQQ E DKEGIT+EERYMLRKVGLRMK FLLMGRRGVFD
Sbjct: 546  MALEKKAKAEKLLAELENAAIPQQPETDKEGITKEERYMLRKVGLRMKPFLLMGRRGVFD 605

Query: 1214 GTVENMHLHWKYRELVKVISKQRSIEAALQEARTLEAESGGILVAVERVIRGYAIIVYRG 1035
            GT+ENMHLHWKYRELVK+I  ++SIEA  Q A+TLEAESGGILVAVERV +GYAIIVYRG
Sbjct: 606  GTIENMHLHWKYRELVKIICNEKSIEAVQQVAQTLEAESGGILVAVERVSKGYAIIVYRG 665

Query: 1034 KNYERPECLRPKTLLTKREAMKRSLEAQRRQSLKLHVLELARNVEKLKLQLVKDEEGNGI 855
            KNY RP  LRP+TLL KREAMKRS+EAQRR+SLKLHVL L  N+++LKL LVKD+E + +
Sbjct: 666  KNYSRPASLRPQTLLNKREAMKRSIEAQRRESLKLHVLRLNENIDELKLLLVKDKEADNM 725

Query: 854  ETVDESILPLVKEEIGEMQLAKCMRSDSSYDVNVEAREERGADLTTTDTESNDPMDATID 675
            ++V ES   L +++                    EAR         T    ND M A ++
Sbjct: 726  QSVGESRNELARDK-------------------QEAR--------VTPVNLNDGMGAVVN 758

Query: 674  GPLATQQDKQTDFSLMHNGIRISETESESS-------------------LEYVSKEYQAN 552
            G LATQQD+   FS   +   I + E  SS                    E V+ E  AN
Sbjct: 759  GQLATQQDEVISFSSTWDEDEIGKFEPGSSDESVTNEEDEIGKVGPGPSNESVTNETHAN 818

Query: 551  MIADFYAEDVASGSASCLDNSMGFQQEVMEYNTAVDAEHCSYDNVPVESSLESSKCI--S 378
             + D   E V    ++C    +  + +   + T +         V  + + +  K I  S
Sbjct: 819  FLKDTNGE-VGDFVSTCFPEDVMGRGKQEAHVTPMKLNDGMGTIVNGQLATQQDKVITFS 877

Query: 377  ELLSDDEPIEVS-LESAKTISEFSSDDEPIKVSLESAKTISEFSTDNEPIELSLESAKTI 201
             +  +DE  EV  + S++ ++  +  +    V+ E   +IS  S   + +   L S+ T+
Sbjct: 878  SICCEDENGEVEPVSSSEPVTNETHANLFKDVNGEEGVSIST-SFPEDAMSNGLNSSATV 936

Query: 200  SEFS--SDNEPTXXXXXXXXXXXXXSTPIGIQNGWNENTSRTVQLSNRDRLLLRKQALRM 27
             +    S+ E               S P+ ++  +N   S++V LSN +RLLLRKQAL+M
Sbjct: 937  DKQHRVSEIEAKDSSGRFGNSESKPSVPVMVRKDFNGRPSKSVHLSNGERLLLRKQALKM 996

Query: 26   KKCPVLAV 3
            KK PVLAV
Sbjct: 997  KKRPVLAV 1004