BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00003283
         (1767 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   842   0.0  
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   838   0.0  
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   838   0.0  
gb|KDO48034.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   816   0.0  
gb|KDO48031.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   780   0.0  
gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   739   0.0  
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   730   0.0  
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   724   0.0  
ref|XP_012492333.1| PREDICTED: RNA polymerase sigma factor sigA-...   723   0.0  
ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA ...   716   0.0  
gb|KHG03684.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   714   0.0  
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   712   0.0  
ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA ...   710   0.0  
ref|XP_012492331.1| PREDICTED: RNA polymerase sigma factor sigA-...   709   0.0  
ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA ...   708   0.0  
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   706   0.0  
gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   697   0.0  
gb|AKC88633.1| sigma factor [Melianthus villosus]                     696   0.0  
gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sin...   695   0.0  
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   687   0.0  

>gb|KDO48032.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
            gi|641828897|gb|KDO48033.1| hypothetical protein
            CISIN_1g010521mg [Citrus sinensis]
          Length = 508

 Score =  842 bits (2174), Expect = 0.0
 Identities = 440/509 (86%), Positives = 459/509 (90%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KS++Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSILQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQNRLKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPSVDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
            RVENNPWHGVDD ALKDEVNK               LYYGLDKECLTWE+ISKRIGLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
            sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X2 [Citrus
            sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED: RNA
            polymerase sigma factor sigA-like isoform X3 [Citrus
            sinensis]
          Length = 508

 Score =  838 bits (2166), Expect = 0.0
 Identities = 440/509 (86%), Positives = 457/509 (89%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KSV Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSVPQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQN LKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPSVDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
            RVENNPWHGVDD ALKDEVNK               LYYGLDKECLTWE+ISKRIGLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
            gi|557539599|gb|ESR50643.1| hypothetical protein
            CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  838 bits (2166), Expect = 0.0
 Identities = 438/509 (86%), Positives = 458/509 (89%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KSV+Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSVLQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQN LKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNHLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADL+QGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTP+VDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGVTPAVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
            RVENNPWHGVDD ALKDEVNK               LYYGLDKECLTWE+ISKRIGLSRE
Sbjct: 420  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 479

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 480  RVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>gb|KDO48034.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 499

 Score =  816 bits (2109), Expect = 0.0
 Identities = 431/509 (84%), Positives = 450/509 (88%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KS++Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSILQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQNRLKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL    
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERL---- 235

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
                  +SLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 236  -----GSSLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 290

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 291  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 350

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPSVDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 351  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 410

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
            RVENNPWHGVDD ALKDEVNK               LYYGLDKECLTWE+ISKRIGLSRE
Sbjct: 411  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 470

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 471  RVRQVGLVALEKLKHAARKKKMEAMLVKH 499


>gb|KDO48031.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 485

 Score =  780 bits (2015), Expect = 0.0
 Identities = 416/509 (81%), Positives = 436/509 (85%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KS++Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSILQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQNRLKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPSVDRIAEYLNMSQKKVRNATE +                       +YIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEVL-----------------------AYIADN 396

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
            RVENNPWHGVDD ALKDEVNK               LYYGLDKECLTWE+ISKRIGLSRE
Sbjct: 397  RVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRE 456

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 457  RVRQVGLVALEKLKHAARKKKMEAMLVKH 485


>gb|KDO48035.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 443

 Score =  739 bits (1908), Expect = 0.0
 Identities = 384/436 (88%), Positives = 401/436 (91%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KS++Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSILQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQNRLKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPSVDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 488  RVENNPWHGVDDRALK 441
            RVENNPWHGVDD ALK
Sbjct: 420  RVENNPWHGVDDWALK 435


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
            gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
            [Theobroma cacao]
          Length = 508

 Score =  730 bits (1885), Expect = 0.0
 Identities = 384/510 (75%), Positives = 433/510 (84%), Gaps = 1/510 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGL+ GKRLLSSSF YSDI EKLSY ND GS++ Q  STK+++ AKK      
Sbjct: 1    MMATAAVIGLTTGKRLLSSSFSYSDIIEKLSYANDYGSSHHQTSSTKSLIVAKKSSNCSQ 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDT-NYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSML 1392
                 N++ QS+KA KEHVD+ +  ST EP F+ SND+E ES  L+YSVEALLLLQKSML
Sbjct: 61   SLPSSNRRAQSIKALKEHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVEALLLLQKSML 120

Query: 1391 EKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSK 1212
            EKQW LSFERTV   SPS+K H K+PVTCSGVSARQRR N+K+KIL   +KS++Q   +K
Sbjct: 121  EKQWTLSFERTVFTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQ-NKSIIQP-NAK 178

Query: 1211 QLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCE 1032
            QLRS+ SPEL+Q+RLKGYVKGVVS+ELL+HA+V RLSKKIK GLSL+EH+ RLKERL CE
Sbjct: 179  QLRSLISPELLQSRLKGYVKGVVSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCE 238

Query: 1031 PSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGG 852
            PS EQLA SL+ISR EL+S +++CSLAREKL MSNVRLVM IAQRYDNMGA+M+DL+QGG
Sbjct: 239  PSDEQLATSLKISRAELRSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGG 298

Query: 851  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKI 672
            LIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRT+RLP HLHER GLIRNAKI
Sbjct: 299  LIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKI 358

Query: 671  RLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIAD 492
            RLEEKG+TP++DRIAE LNMSQKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD
Sbjct: 359  RLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIAD 418

Query: 491  NRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSR 312
            N VEN PWHGVD+ ALKDEVN+               LYYGLDKE LTWE+ISKRIGLSR
Sbjct: 419  NHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSR 478

Query: 311  ERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            ERVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 479  ERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 508

 Score =  724 bits (1869), Expect = 0.0
 Identities = 386/509 (75%), Positives = 428/509 (84%), Gaps = 1/509 (0%)
 Frame = -2

Query: 1745 MATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXXX 1566
            MATAAVIGLSAGKRLLSS+FYYSD++EKLS  N+ G  + Q+ STK ++ AKK       
Sbjct: 1    MATAAVIGLSAGKRLLSSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGPS 60

Query: 1565 XXXXNQQTQSVKAPKEHVDTNYA-STLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                N+ TQS+KA KEHVDT  A ST    F+T ND+EEESS L+YSVEALLLLQKSMLE
Sbjct: 61   FPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERT  + SPS+K+  K+PVTCSGVSARQRR+N ++K LS  SK  +Q    KQ
Sbjct: 121  KQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQ-SKFTVQANVFKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            L+S  SPEL+QNRLKGYVKGVVSEELL+HA+V RLS+ IK GLSL++HKSRLKERL C+P
Sbjct: 180  LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S EQ+A SL+ISR ELQS  + CSLAREKL MSNVRLVM IAQRYDNMGA+MADLVQGGL
Sbjct: 240  SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPS+DRIAE LN+SQKKVRNATEA+SKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
             +ENNPWHGVDD ALKDEVNK               LYYGLD E LTWE+ISKRIGLSRE
Sbjct: 420  CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 479

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKK+EAMLVK+
Sbjct: 480  RVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>ref|XP_012492333.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
            [Gossypium raimondii] gi|763777227|gb|KJB44350.1|
            hypothetical protein B456_007G247500 [Gossypium
            raimondii]
          Length = 508

 Score =  723 bits (1867), Expect = 0.0
 Identities = 379/510 (74%), Positives = 431/510 (84%), Gaps = 1/510 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLS GKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+      
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLMVAKRSSNCSQ 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDT-NYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSML 1392
                 N+ TQS+KA KEHVDT +  ST+EPW   +ND+E+ES  L+YSVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSML 120

Query: 1391 EKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSK 1212
            EKQW LSFERT+   SPS+KTHNKVPVTCSGVSARQRR ++K+KILS  +KS++Q   +K
Sbjct: 121  EKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQ-NKSMIQP-NAK 178

Query: 1211 QLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCE 1032
            QLRS+  PEL+QNRLKGYVKGVVSE+LL+HA+V RLS+KIK GLSL+EH+ RLKERL CE
Sbjct: 179  QLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCE 238

Query: 1031 PSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGG 852
            PS EQLA SL++SR EL+S  ++CSLAREKL MSNVRLVM IAQRYDNMGA+M+DL+QGG
Sbjct: 239  PSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGG 298

Query: 851  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKI 672
            LIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRT+RLP +LHER GLIRNAK 
Sbjct: 299  LIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKY 358

Query: 671  RLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIAD 492
            RLEEKG+TP++DRIAE LNMSQKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD
Sbjct: 359  RLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIAD 418

Query: 491  NRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSR 312
            N VENNPWHGVD+ ALKDEVN+               LY+GLDKE LTWE+ISKRIGLSR
Sbjct: 419  NHVENNPWHGVDEWALKDEVNRLINITLGEREREIIRLYHGLDKESLTWEDISKRIGLSR 478

Query: 311  ERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            ERVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 479  ERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_012070278.1| PREDICTED: RNA polymerase sigma factor sigA [Jatropha curcas]
            gi|802585167|ref|XP_012070279.1| PREDICTED: RNA
            polymerase sigma factor sigA [Jatropha curcas]
            gi|643732469|gb|KDP39565.1| hypothetical protein
            JCGZ_02585 [Jatropha curcas]
          Length = 508

 Score =  716 bits (1849), Expect = 0.0
 Identities = 381/509 (74%), Positives = 423/509 (83%), Gaps = 1/509 (0%)
 Frame = -2

Query: 1745 MATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXXX 1566
            MATAAVIGL AGKRLLSS+FYYSD++EKL  +ND G  + Q  STKNV+ AKK       
Sbjct: 1    MATAAVIGLHAGKRLLSSTFYYSDLTEKLFNVNDHGLTHYQSSSTKNVIVAKKSSNYGSS 60

Query: 1565 XXXXNQQTQSVKAPKEHVDT-NYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                N+  QS+KA KEHVDT +  ST    FET  DIEE SS L+YSVEALLLLQKSMLE
Sbjct: 61   FQSSNRNAQSIKALKEHVDTASSPSTAATGFETFVDIEEASSDLDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERT  + SPS K+  ++P+TCSG+SARQRR+N+++K L   SKS++Q  G KQ
Sbjct: 121  KQWNLSFERTASSDSPSTKSQKQIPITCSGLSARQRRINTRRKNLIQ-SKSIVQASGFKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            L+S  SPEL+ NRLKGYVKG+VSEELLTHA+V  LS+ IK GLSL+EHKSRLK+RL C+P
Sbjct: 180  LKSAVSPELLLNRLKGYVKGIVSEELLTHAEVVSLSRIIKAGLSLEEHKSRLKDRLGCDP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S EQLA SLRIS  +L+S ++ CSLAREKL MSNVRLVM IAQRYDNMGA+MADLVQGGL
Sbjct: 240  SDEQLATSLRISLADLRSKLIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAKIR
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKGVTPS+DRIAE LNMSQKKVRNATEA+SKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 360  LEEKGVTPSIDRIAESLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 419

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
              ENNPWHGVD+ ALKDEVNK               LYYGLD E LTWE+ISKRIGLSRE
Sbjct: 420  CPENNPWHGVDEWALKDEVNKLIDLTLQQREREIIRLYYGLDNETLTWEDISKRIGLSRE 479

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVALEKLKHAARKKK+EAMLVK+
Sbjct: 480  RVRQVGLVALEKLKHAARKKKLEAMLVKH 508


>gb|KHG03684.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
            gi|728838604|gb|KHG18047.1| RNA polymerase sigma factor
            rpoD [Gossypium arboreum]
          Length = 508

 Score =  714 bits (1844), Expect = 0.0
 Identities = 377/510 (73%), Positives = 427/510 (83%), Gaps = 1/510 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLS GKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+      
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLIVAKRSSNCSQ 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDT-NYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSML 1392
                 N+ TQ +KA K HVDT +  ST+EPW   +ND+E+ES  L+ SVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQLIKAFKGHVDTASSISTVEPWIHGANDLEQESYDLDCSVEALLLLQKSML 120

Query: 1391 EKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSK 1212
            EKQW LSFERT+   SPS+KTH+KVPVTCSGVSARQRR N+K+KILS  +KS++Q   +K
Sbjct: 121  EKQWTLSFERTMFIESPSRKTHSKVPVTCSGVSARQRRFNTKRKILSQ-NKSMIQP-NAK 178

Query: 1211 QLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCE 1032
            QLRS+  PEL+QNRLKGYVKGVVSE+LL+HA+V RLSKKIK GLSL+EH  RLKERL CE
Sbjct: 179  QLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSKKIKAGLSLEEHILRLKERLGCE 238

Query: 1031 PSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGG 852
            PS EQLA SL++SR EL+S  ++CSLAREKL MSNVRLVM IAQRYDNMGA+M+DL+QGG
Sbjct: 239  PSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGG 298

Query: 851  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKI 672
            LIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRT+RLP +LHER GLIRNAK 
Sbjct: 299  LIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKY 358

Query: 671  RLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIAD 492
            RLEEKG+TP++DRIAE LNMSQKKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHSYIAD
Sbjct: 359  RLEEKGITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIAD 418

Query: 491  NRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSR 312
            N VENNPWHGVD+ ALKDEVN+               LY+GLDKE LTWE+ISKRIGLSR
Sbjct: 419  NHVENNPWHGVDEWALKDEVNRLIDITLGEREREIIRLYHGLDKESLTWEDISKRIGLSR 478

Query: 311  ERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            ERVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 479  ERVRQVGLVALEKLKHAARKKKMEAMLVKH 508


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
            gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
            1 family protein [Populus trichocarpa]
          Length = 509

 Score =  712 bits (1837), Expect = 0.0
 Identities = 374/510 (73%), Positives = 425/510 (83%), Gaps = 1/510 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLS+GKRLLSSSFYYSD++EKLS +ND G       +TKNV+ AKK      
Sbjct: 1    MMATAAVIGLSSGKRLLSSSFYYSDLTEKLSNVNDHGITYYPTATTKNVIVAKKSSNYGP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYAST-LEPWFETSNDIEEESSQLEYSVEALLLLQKSML 1392
                 N+ + S+KA KEHVDT  AS+ +  WF+T +D EEESS L+YSVEALLLLQKSML
Sbjct: 61   SFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1391 EKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSK 1212
            EKQWNLSFERT  + S SKK + K+PVTCSGVSARQRRVN+++K   + SK + Q    K
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKN-QNQSKFMSQSSDFK 179

Query: 1211 QLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCE 1032
             LRS+ SP+L+QNRLKGYVKGVVS+E+L H +V RLS+ I+ GLS ++HKSRLKERL CE
Sbjct: 180  FLRSVSSPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCE 239

Query: 1031 PSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGG 852
            PS EQ+A SLRISR +LQS ++ CSLAREKL MSNVRLVM IAQ+YDNMGA+MADLVQGG
Sbjct: 240  PSDEQIADSLRISRADLQSKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGG 299

Query: 851  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKI 672
            LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRT+RLPNHLHER GLIRNAKI
Sbjct: 300  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKI 359

Query: 671  RLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIAD 492
            RLEEKGVTPS+DRIAE LNMSQ+KVRNATEA+SKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 360  RLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 419

Query: 491  NRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSR 312
            NR ENNPWHGVD+ ALK+EVNK               LY+GLD+ECLTWE+ISKR+GLSR
Sbjct: 420  NRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSR 479

Query: 311  ERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            ERVRQVGLVALEKLKHAARK+  EAMLVK+
Sbjct: 480  ERVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_011012457.1| PREDICTED: RNA polymerase sigma factor sigA [Populus euphratica]
            gi|743936142|ref|XP_011012458.1| PREDICTED: RNA
            polymerase sigma factor sigA [Populus euphratica]
          Length = 509

 Score =  710 bits (1832), Expect = 0.0
 Identities = 374/510 (73%), Positives = 424/510 (83%), Gaps = 1/510 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLS GKRLLSSSFYYSD++EKLS +ND G       +TKNVV AKK      
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFYYSDLTEKLSSVNDHGITYCPTATTKNVVVAKKSSNYGP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYAST-LEPWFETSNDIEEESSQLEYSVEALLLLQKSML 1392
                 N+ + S+KA KEHVDT  AS+ +  WF+T +D EEESS L+YSVEALLLLQKSML
Sbjct: 61   NFPSSNRNSHSIKALKEHVDTASASSNVATWFKTFDDFEEESSALDYSVEALLLLQKSML 120

Query: 1391 EKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSK 1212
            EKQWNLSFERT  + S SKK + K+PVTCSGVSARQRRVN+++K   + SK + Q    K
Sbjct: 121  EKQWNLSFERTNSSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKN-QNQSKFMSQSSDFK 179

Query: 1211 QLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCE 1032
             LRS+ SP+L+QNRLKGYVKGVVS+E+L H +V RLS+ I+ GLS ++HKSRLKERL CE
Sbjct: 180  FLRSVISPDLLQNRLKGYVKGVVSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCE 239

Query: 1031 PSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGG 852
            PS EQ+A SLRISR +LQ+ ++ CSLAREKL MSNVRLVM IAQ+YDNMGA+MADLVQGG
Sbjct: 240  PSDEQIADSLRISRADLQAKLIQCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGG 299

Query: 851  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKI 672
            LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRT+RLPNHLHER GLIRNAKI
Sbjct: 300  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKI 359

Query: 671  RLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIAD 492
            RLEEKGVTPS+DRIAE LNMSQ+KVRNATEA+SKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 360  RLEEKGVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 419

Query: 491  NRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSR 312
            NR ENNPWHGVD+ ALK+EVNK               LY+GLD+ECLTWE+ISKR+GLSR
Sbjct: 420  NRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSR 479

Query: 311  ERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            ERVRQVGLVALEKLKHAARK+  EAMLVK+
Sbjct: 480  ERVRQVGLVALEKLKHAARKRNTEAMLVKH 509


>ref|XP_012492331.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
            [Gossypium raimondii] gi|823194413|ref|XP_012492332.1|
            PREDICTED: RNA polymerase sigma factor sigA-like isoform
            X1 [Gossypium raimondii] gi|763777231|gb|KJB44354.1|
            hypothetical protein B456_007G247500 [Gossypium
            raimondii]
          Length = 535

 Score =  709 bits (1829), Expect = 0.0
 Identities = 379/537 (70%), Positives = 431/537 (80%), Gaps = 28/537 (5%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLS GKRLLSSSF YS+  +KLSY  D GS+  Q  STK ++ AK+      
Sbjct: 1    MMATAAVIGLSTGKRLLSSSFSYSETVDKLSYAGDYGSSYYQTPSTKTLMVAKRSSNCSQ 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDT-NYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSML 1392
                 N+ TQS+KA KEHVDT +  ST+EPW   +ND+E+ES  L+YSVEALLLLQKSML
Sbjct: 61   NLPSSNRHTQSIKAFKEHVDTASSISTVEPWIHGTNDLEQESYDLDYSVEALLLLQKSML 120

Query: 1391 EKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSK 1212
            EKQW LSFERT+   SPS+KTHNKVPVTCSGVSARQRR ++K+KILS  +KS++Q   +K
Sbjct: 121  EKQWTLSFERTMFTESPSRKTHNKVPVTCSGVSARQRRFSTKRKILSQ-NKSMIQP-NAK 178

Query: 1211 QLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCE 1032
            QLRS+  PEL+QNRLKGYVKGVVSE+LL+HA+V RLS+KIK GLSL+EH+ RLKERL CE
Sbjct: 179  QLRSLIGPELLQNRLKGYVKGVVSEDLLSHAEVVRLSRKIKAGLSLEEHRLRLKERLGCE 238

Query: 1031 PSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGG 852
            PS EQLA SL++SR EL+S  ++CSLAREKL MSNVRLVM IAQRYDNMGA+M+DL+QGG
Sbjct: 239  PSDEQLATSLKVSRAELRSRSIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGG 298

Query: 851  LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKI 672
            LIGLLRGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRT+RLP +LHER GLIRNAK 
Sbjct: 299  LIGLLRGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLGLIRNAKY 358

Query: 671  RLEEKGVTPSVD---------------------------RIAEYLNMSQKKVRNATEAMS 573
            RLEEKG+TP++D                           RIAE LNMSQKKVRNATEA+S
Sbjct: 359  RLEEKGITPTIDSLLYASSQVSYSLNEPSFKYLILLYFQRIAESLNMSQKKVRNATEAVS 418

Query: 572  KVFSLDREAFPSLNGLPGETHHSYIADNRVENNPWHGVDDRALKDEVNKXXXXXXXXXXX 393
            KVFSLDR+AFPSLNGLPGETHHSYIADN VENNPWHGVD+ ALKDEVN+           
Sbjct: 419  KVFSLDRDAFPSLNGLPGETHHSYIADNHVENNPWHGVDEWALKDEVNRLINITLGERER 478

Query: 392  XXXXLYYGLDKECLTWEEISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
                LY+GLDKE LTWE+ISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVK+
Sbjct: 479  EIIRLYHGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 535


>ref|XP_008234513.1| PREDICTED: RNA polymerase sigma factor sigA [Prunus mume]
          Length = 512

 Score =  708 bits (1827), Expect = 0.0
 Identities = 374/512 (73%), Positives = 422/512 (82%), Gaps = 3/512 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDL-GSANSQVGSTKNVVAAKKXXXXX 1572
            MMATAAVIGLS GKRLL+SSFYYSDI+EKL ++ND  G  +    STKNVV A+K     
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1571 XXXXXXNQQTQSVKAPKEHVDTNYA--STLEPWFETSNDIEEESSQLEYSVEALLLLQKS 1398
                  N+  QS++A KEHV T  A  S  + WF+  ND+EEESS LEYSVEALLLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVHTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1397 MLEKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYG 1218
            MLEKQWNLSFE+ VL  S SK T  K+PVTCSGVSARQRR+ S K+   + S  VM    
Sbjct: 121  MLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTLNKSTCVMHPST 180

Query: 1217 SKQLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLR 1038
            +K LR++ SPEL+QNR+KGYVKGV+SE+LLTH +V RLSKKIK GLS++EHKSRLKERL 
Sbjct: 181  NKPLRAIVSPELLQNRVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLG 240

Query: 1037 CEPSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQ 858
            CEPS EQLA SLRISR +LQS +++C LAREKL MSNVRLVM IAQRYDNMGA+MADL+Q
Sbjct: 241  CEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQ 300

Query: 857  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNA 678
            GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLP HLHER GLIRNA
Sbjct: 301  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 360

Query: 677  KIRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYI 498
            KIRLEEKG+TPS+DRIAE LNMS+KKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHSYI
Sbjct: 361  KIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYI 420

Query: 497  ADNRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGL 318
            ADNR+EN PWHGVD  ALK+EV+K               LYYGL+ ECLTWE+ISKRIGL
Sbjct: 421  ADNRLENIPWHGVDAWALKEEVSKLINMMLGEREREIIQLYYGLENECLTWEDISKRIGL 480

Query: 317  SRERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            SRERVRQVGLVALEKLKHAARK++MEAML+K+
Sbjct: 481  SRERVRQVGLVALEKLKHAARKREMEAMLLKH 512


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
            gi|462415485|gb|EMJ20222.1| hypothetical protein
            PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  706 bits (1823), Expect = 0.0
 Identities = 373/512 (72%), Positives = 421/512 (82%), Gaps = 3/512 (0%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDL-GSANSQVGSTKNVVAAKKXXXXX 1572
            MMATAAVIGLS GKRLL+SSFYYSDI+EKL ++ND  G  +    STKNVV A+K     
Sbjct: 1    MMATAAVIGLSTGKRLLNSSFYYSDITEKLFHLNDHHGFLHCHFSSTKNVVTARKPSNCS 60

Query: 1571 XXXXXXNQQTQSVKAPKEHVDTNYA--STLEPWFETSNDIEEESSQLEYSVEALLLLQKS 1398
                  N+  QS++A KEHV T  A  S  + WF+  ND+EEESS LEYSVEALLLLQKS
Sbjct: 61   SRFPSSNRPQQSIRALKEHVQTASAPSSATQQWFQELNDLEEESSDLEYSVEALLLLQKS 120

Query: 1397 MLEKQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYG 1218
            MLEKQWNLSFE+ VL  S SK T  K+PVTCSGVSARQRR+ S K+   + S  VM    
Sbjct: 121  MLEKQWNLSFEKKVLRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPST 180

Query: 1217 SKQLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLR 1038
            +K LR++ SPEL+QN +KGYVKGV+SE+LLTH +V RLSKKIK GLS++EHKSRLKERL 
Sbjct: 181  NKPLRAIVSPELLQNHVKGYVKGVLSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLG 240

Query: 1037 CEPSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQ 858
            CEPS EQLA SLRISR +LQS +++C LAREKL MSNVRLVM IAQRYDNMGA+MADL+Q
Sbjct: 241  CEPSDEQLATSLRISRAQLQSKLIECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQ 300

Query: 857  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNA 678
            GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLP HLHER GLIRNA
Sbjct: 301  GGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA 360

Query: 677  KIRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYI 498
            KIRLEEKG+TPS+DRIAE LNMS+KKVRNATEA+SKVFSLDR+AFPSLNGLPGETHHSYI
Sbjct: 361  KIRLEEKGITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYI 420

Query: 497  ADNRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGL 318
            ADNR+EN PWHGVD  ALK+EV+K               LYYGL+ ECLTWE+ISKRIGL
Sbjct: 421  ADNRLENIPWHGVDAWALKEEVSKLINMMLGEREKEIIQLYYGLENECLTWEDISKRIGL 480

Query: 317  SRERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            SRERVRQVGLVALEKLKHAARK++MEAML+K+
Sbjct: 481  SRERVRQVGLVALEKLKHAARKREMEAMLLKH 512


>gb|KDO48036.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 419

 Score =  697 bits (1800), Expect = 0.0
 Identities = 365/417 (87%), Positives = 382/417 (91%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KS++Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSILQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQNRLKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYI 498
            LEEKGVTPSVDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHHS I
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHHSVI 416


>gb|AKC88633.1| sigma factor [Melianthus villosus]
          Length = 506

 Score =  696 bits (1796), Expect = 0.0
 Identities = 367/509 (72%), Positives = 421/509 (82%), Gaps = 1/509 (0%)
 Frame = -2

Query: 1745 MATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXXX 1566
            MATAAVIGLSAGKRLLSSS YYSD +EKLSY ND G  N+    TK VV AKK       
Sbjct: 1    MATAAVIGLSAGKRLLSSSLYYSDYAEKLSYANDHGHYNAT--PTKTVVIAKKSSNCSPR 58

Query: 1565 XXXXNQQTQSVKAPKEHVDT-NYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                N++TQS+KA KEHVD  +  ST E WF+ SND++E++  +EYSVEALLLLQKSMLE
Sbjct: 59   FPSSNRKTQSIKALKEHVDDISGPSTAESWFQRSNDVDEQNFDIEYSVEALLLLQKSMLE 118

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSF++T+L     +KT  ++PVTCSGVSARQRR+++K+KILS  S S+MQ     +
Sbjct: 119  KQWNLSFDKTMLTDLVKEKTCKRIPVTCSGVSARQRRMSNKRKILSENS-SMMQTSRCNR 177

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LR++  PEL+QNR KGYVKGVVSEELL+HA+V  LSKKIK GLSL+EHK RLK+RL CEP
Sbjct: 178  LRTIIGPELMQNRFKGYVKGVVSEELLSHAEVVHLSKKIKCGLSLEEHKLRLKKRLGCEP 237

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S EQLA SLRISR EL+S  ++  LAREKL MSNVRLVM IAQRYDNMGA+M+DLVQGGL
Sbjct: 238  SDEQLATSLRISRAELRSKWIESGLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGL 297

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDS+KGFKISTYVYWWIRQGVSRAL+ENSRT+RLP HLHER GLIRNAKIR
Sbjct: 298  IGLLRGIEKFDSAKGFKISTYVYWWIRQGVSRALIENSRTLRLPTHLHERLGLIRNAKIR 357

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIADN 489
            LEEKG+TPS++R+AE LNMS+KK+RNATEA+SKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 358  LEEKGITPSIERLAECLNMSKKKIRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 417

Query: 488  RVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLSRE 309
             ++NNPWHGVD+ ALKDEV K               LY+GLD ECLTWE+ISKRIGLSRE
Sbjct: 418  CLDNNPWHGVDEWALKDEVKKLIEMTLGEREREIIRLYHGLDNECLTWEDISKRIGLSRE 477

Query: 308  RVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RVRQVGLVA+EKLKHAAR+K MEAMLVK+
Sbjct: 478  RVRQVGLVAMEKLKHAARRKHMEAMLVKH 506


>gb|KDO48037.1| hypothetical protein CISIN_1g010521mg [Citrus sinensis]
          Length = 417

 Score =  695 bits (1793), Expect = 0.0
 Identities = 363/414 (87%), Positives = 380/414 (91%)
 Frame = -2

Query: 1748 MMATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXX 1569
            MMATAAVIGLSAGKRLLSSSFYYSDISEK SYINDLGSANSQVGSTKNVVAAKK      
Sbjct: 1    MMATAAVIGLSAGKRLLSSSFYYSDISEKFSYINDLGSANSQVGSTKNVVAAKKSSNYNP 60

Query: 1568 XXXXXNQQTQSVKAPKEHVDTNYASTLEPWFETSNDIEEESSQLEYSVEALLLLQKSMLE 1389
                 N+QTQ +KA KEHVDTN+AST EPW E  N IEEESS+L+YSVEALLLLQKSMLE
Sbjct: 61   SFPSSNRQTQPIKALKEHVDTNFASTAEPWAEPPNSIEEESSELDYSVEALLLLQKSMLE 120

Query: 1388 KQWNLSFERTVLAGSPSKKTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGSKQ 1209
            KQWNLSFERTVL  SPSKKTH KVPVTCSGVSARQRR+NSKKKILS  +KS++Q  GSKQ
Sbjct: 121  KQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQ-NKSILQQNGSKQ 179

Query: 1208 LRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRCEP 1029
            LRSM SPELIQNRLKGYVKGVVSEELLTHA+V RLSKKIK GLSLD+HK RLKERL CEP
Sbjct: 180  LRSMISPELIQNRLKGYVKGVVSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEP 239

Query: 1028 SVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQGGL 849
            S+EQLAASLRISRPELQSI+M+CSLAREKLVMSNVRLVM IAQRYDNMGADMADLVQGGL
Sbjct: 240  SMEQLAASLRISRPELQSILMECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGL 299

Query: 848  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAKIR 669
            IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLPNHLHER GLIRNAK+R
Sbjct: 300  IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLR 359

Query: 668  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHH 507
            LEEKGVTPSVDRIAEYLNMSQKKVRNATEA+ KVFSLDREAFPSLNGLPGETHH
Sbjct: 360  LEEKGVTPSVDRIAEYLNMSQKKVRNATEAIGKVFSLDREAFPSLNGLPGETHH 413


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
            gi|734432890|gb|KHN46496.1| RNA polymerase sigma factor
            rpoD [Glycine soja] gi|947075123|gb|KRH23963.1|
            hypothetical protein GLYMA_12G013300 [Glycine max]
          Length = 503

 Score =  687 bits (1772), Expect = 0.0
 Identities = 363/511 (71%), Positives = 424/511 (82%), Gaps = 3/511 (0%)
 Frame = -2

Query: 1745 MATAAVIGLSAGKRLLSSSFYYSDISEKLSYINDLGSANSQVGSTKNVVAAKKXXXXXXX 1566
            MATAAVIGLS GKRLLSSS++YSDI EKLSY +D GS + Q+  TK+++ AKK       
Sbjct: 1    MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60

Query: 1565 XXXXNQQTQSVKAPKEHVDTNYASTLEPWFET--SNDIEEESSQLEYSVEALLLLQKSML 1392
                NQQ QS+KA KEHVD +  +  +PWF++  SND+E ESS++ YSVEALLLLQKSML
Sbjct: 61   FPASNQQNQSIKALKEHVD-DAPTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQKSML 119

Query: 1391 EKQWNLSFERTVLAGSPSK-KTHNKVPVTCSGVSARQRRVNSKKKILSHYSKSVMQHYGS 1215
            EKQWNLSFER VL  + SK K   KV VTCSGVSARQRR+N+K+K       + ++  G+
Sbjct: 120  EKQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRK-------TAIKTCGA 172

Query: 1214 KQLRSMESPELIQNRLKGYVKGVVSEELLTHAQVARLSKKIKNGLSLDEHKSRLKERLRC 1035
             QL+S  SPEL+Q+RLKGYVKG+VSEELL+HA+V  LS+KIK GLSL+EHKSRLKE+L C
Sbjct: 173  MQLKSKISPELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGC 232

Query: 1034 EPSVEQLAASLRISRPELQSIMMDCSLAREKLVMSNVRLVMYIAQRYDNMGADMADLVQG 855
            EPS +Q+A SL+ISR EL++ M++CSLAREKL MSNVRLVM IAQ+YDN+GA+M DLVQG
Sbjct: 233  EPSDDQMATSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQG 292

Query: 854  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTVRLPNHLHERQGLIRNAK 675
            GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRT+RLP HLHER  LIRNAK
Sbjct: 293  GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAK 352

Query: 674  IRLEEKGVTPSVDRIAEYLNMSQKKVRNATEAMSKVFSLDREAFPSLNGLPGETHHSYIA 495
             RLEE+G+TP++DRIA+YLNMSQKKVRNATEA+SK+ SLDREAFPSLNGL GETHHSYIA
Sbjct: 353  FRLEERGITPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETHHSYIA 412

Query: 494  DNRVENNPWHGVDDRALKDEVNKXXXXXXXXXXXXXXXLYYGLDKECLTWEEISKRIGLS 315
            DNRVEN PW+GVD+ ALKDEVN+               LYYGL+KECLTWE+ISKRIGLS
Sbjct: 413  DNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRIGLS 472

Query: 314  RERVRQVGLVALEKLKHAARKKKMEAMLVKY 222
            RERVRQVGLVALEKLKHAARK++MEAML+K+
Sbjct: 473  RERVRQVGLVALEKLKHAARKRQMEAMLLKH 503