BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00003010
         (1351 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006481594.1| PREDICTED: mediator of RNA polymerase II tra...   488   e-179
ref|XP_006430068.1| hypothetical protein CICLE_v10011749mg [Citr...   486   e-179
ref|XP_012074325.1| PREDICTED: mediator of RNA polymerase II tra...   403   e-145
ref|XP_002532550.1| conserved hypothetical protein [Ricinus comm...   393   e-143
ref|XP_007027968.1| Serine/threonine-protein kinase irlC isoform...   393   e-142
ref|XP_012468122.1| PREDICTED: mediator of RNA polymerase II tra...   387   e-139
ref|XP_004305585.1| PREDICTED: mediator of RNA polymerase II tra...   402   e-137
ref|XP_011042601.1| PREDICTED: mediator of RNA polymerase II tra...   390   e-137
ref|XP_002323389.2| hypothetical protein POPTR_0016s07140g [Popu...   389   e-137
ref|XP_012468123.1| PREDICTED: mediator of RNA polymerase II tra...   387   e-135
ref|XP_002274655.1| PREDICTED: mediator of RNA polymerase II tra...   382   e-134
ref|XP_007202171.1| hypothetical protein PRUPE_ppa006482mg [Prun...   386   e-132
ref|XP_008241051.1| PREDICTED: mediator of RNA polymerase II tra...   385   e-132
ref|XP_008360597.1| PREDICTED: mediator of RNA polymerase II tra...   377   e-130
ref|XP_009349040.1| PREDICTED: mediator of RNA polymerase II tra...   373   e-129
gb|KJB16552.1| hypothetical protein B456_002G235400 [Gossypium r...   387   e-126
ref|XP_010037314.1| PREDICTED: mediator of RNA polymerase II tra...   370   e-126
ref|XP_010246903.1| PREDICTED: mediator of RNA polymerase II tra...   353   e-125
gb|KCW49005.1| hypothetical protein EUGRSUZ_K02619 [Eucalyptus g...   370   e-124
ref|XP_012468124.1| PREDICTED: mediator of RNA polymerase II tra...   387   e-124

>ref|XP_006481594.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Citrus sinensis]
          Length = 441

 Score =  488 bits (1256), Expect(2) = e-179
 Identities = 249/277 (89%), Positives = 256/277 (92%)
 Frame = -2

Query: 1185 PDPPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLF 1006
            PD PPQST EAPPKQVALALERLAQAGRLIADVRLGADRLLEALF+AAQPHQSNKPLHLF
Sbjct: 35   PDQPPQSTTEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFVAAQPHQSNKPLHLF 94

Query: 1005 IKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 826
            IKED AMRQHLQDLRSIGR+LEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL
Sbjct: 95   IKEDAAMRQHLQDLRSIGRQLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 154

Query: 825  AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHL 646
            AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRV+DQSTEPESKK C+ QALPASN E L
Sbjct: 155  AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEEL 214

Query: 645  SDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKL 466
            SDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLP+SANESPLELLKEH+FHSSSKL
Sbjct: 215  SDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKL 274

Query: 465  RPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            RPGLQNT             IELLFPS+ RAIVSLHP
Sbjct: 275  RPGLQNT-----VAADKVSVIELLFPSIFRAIVSLHP 306



 Score =  171 bits (434), Expect(2) = e-179
 Identities = 82/109 (75%), Positives = 89/109 (81%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXX 159
           SS+YHVFR ITEHAGTALQ+FLGI+TETSLY +LHWICSYQTLFSKVCSKCG        
Sbjct: 332 SSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGRLLAMDKR 391

Query: 158 XXXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPEDA 12
               LPPVSRPYRHF P VTSS Q ISSTN+QS DV++AYHIGCF EDA
Sbjct: 392 LALLLPPVSRPYRHFFPTVTSSAQLISSTNEQSSDVVNAYHIGCFSEDA 440


>ref|XP_006430068.1| hypothetical protein CICLE_v10011749mg [Citrus clementina]
            gi|557532125|gb|ESR43308.1| hypothetical protein
            CICLE_v10011749mg [Citrus clementina]
          Length = 438

 Score =  486 bits (1250), Expect(2) = e-179
 Identities = 248/277 (89%), Positives = 256/277 (92%)
 Frame = -2

Query: 1185 PDPPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLF 1006
            PD PPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALF+AAQPHQSNKPLHLF
Sbjct: 32   PDQPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFVAAQPHQSNKPLHLF 91

Query: 1005 IKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 826
            IKED AMRQHLQDLR+IGR+LE TGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL
Sbjct: 92   IKEDAAMRQHLQDLRTIGRQLEGTGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 151

Query: 825  AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHL 646
            AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRV+DQSTEPESKK C+ QALPASN E L
Sbjct: 152  AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVHDQSTEPESKKHCVPQALPASNQEEL 211

Query: 645  SDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKL 466
            SDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLP+SANESPLELLKEH+FHSSSKL
Sbjct: 212  SDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPSSANESPLELLKEHNFHSSSKL 271

Query: 465  RPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            RPGLQNT             IELLFPS+ RAIVSLHP
Sbjct: 272  RPGLQNT-----VAADKVAVIELLFPSIFRAIVSLHP 303



 Score =  172 bits (437), Expect(2) = e-179
 Identities = 83/109 (76%), Positives = 89/109 (81%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXX 159
           SS+YHVFR ITEHAGTALQ+FLGI+TETSLY +LHWICSYQTLFSKVCSKCG        
Sbjct: 329 SSVYHVFRHITEHAGTALQFFLGIRTETSLYFLLHWICSYQTLFSKVCSKCGQLLAMDKR 388

Query: 158 XXXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPEDA 12
               LPPVSRPYRHF P VTSS Q ISSTN+QS DV+SAYHIGCF EDA
Sbjct: 389 LALLLPPVSRPYRHFFPTVTSSAQLISSTNEQSSDVVSAYHIGCFSEDA 437


>ref|XP_012074325.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            [Jatropha curcas] gi|643727826|gb|KDP36119.1|
            hypothetical protein JCGZ_08763 [Jatropha curcas]
          Length = 438

 Score =  403 bits (1036), Expect(2) = e-145
 Identities = 204/271 (75%), Positives = 232/271 (85%)
 Frame = -2

Query: 1167 STAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIKEDTA 988
            S A+APPKQVA+A++RLAQA RLIADVRLGADR+LEALF+ AQPHQSNKPL LF KEDTA
Sbjct: 29   SPADAPPKQVAMAMDRLAQAARLIADVRLGADRILEALFITAQPHQSNKPLQLFRKEDTA 88

Query: 987  MRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 808
            MRQHL++LRS+GR+LEE+GVLN+ LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA
Sbjct: 89   MRQHLEELRSVGRQLEESGVLNDSLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 148

Query: 807  SAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSDCKTL 628
            SAVDRTRLALKAFTDQK+RFFPHLDD ++ QS E   K+ C SQ L A+  E LSDCKTL
Sbjct: 149  SAVDRTRLALKAFTDQKRRFFPHLDDGLDGQSAESMPKRHCSSQVLSAALQEDLSDCKTL 208

Query: 627  SDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRPGLQN 448
            SD+L+R+EKE+PNLK+FTYERLDWLKRASSLPTSANE+P+E  KEH+FH+ +KLR G Q 
Sbjct: 209  SDILVRVEKEMPNLKVFTYERLDWLKRASSLPTSANENPMETSKEHTFHTLNKLRTGSQG 268

Query: 447  TXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            +             IELLFPSV RAIVSLHP
Sbjct: 269  S-----STSDKVAVIELLFPSVFRAIVSLHP 294



 Score =  142 bits (358), Expect(2) = e-145
 Identities = 70/107 (65%), Positives = 78/107 (72%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S+YHVFR+ TEHA  ALQ+FLGI TET+LY +LHWICSYQTLF+KVCSKCG         
Sbjct: 321 SVYHVFRQTTEHATMALQHFLGIGTETALYFLLHWICSYQTLFTKVCSKCGRLLAMDRES 380

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPYRHFSP   S+T  ISST DQ+P    AYHIGCF ED
Sbjct: 381 SVLLPPVHRPYRHFSPLKVSTTPPISSTKDQTP---GAYHIGCFSED 424


>ref|XP_002532550.1| conserved hypothetical protein [Ricinus communis]
            gi|223527739|gb|EEF29844.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 434

 Score =  393 bits (1009), Expect(2) = e-143
 Identities = 205/279 (73%), Positives = 230/279 (82%), Gaps = 5/279 (1%)
 Frame = -2

Query: 1176 PPQSTA---EAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLF 1006
            PPQ T    +APPKQVA+A++RL+QA RLIADVRLGADRLLEALFM+AQPHQS KPL LF
Sbjct: 25   PPQETPPADDAPPKQVAMAMDRLSQAARLIADVRLGADRLLEALFMSAQPHQSKKPLLLF 84

Query: 1005 IKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 826
            IKED AMRQHLQDLRS+GR+LEE+GVLN+ LRSRSNSWGLHMPLVCPDGAVVAYAWKRQL
Sbjct: 85   IKEDAAMRQHLQDLRSVGRQLEESGVLNDSLRSRSNSWGLHMPLVCPDGAVVAYAWKRQL 144

Query: 825  AGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNL--E 652
            AGQAGASAVDRTRLALKAFTDQK+RFFPHLDD V+ Q+TE  SKKQC  Q +P   L  E
Sbjct: 145  AGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGVDGQNTESVSKKQCSLQVVPPVTLLVE 204

Query: 651  HLSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSS 472
             LSDCKTLSDVL RLEKE+PN+KI T+ERLDWLKRASSLP   +E+P+E  KEH+FH+ +
Sbjct: 205  ELSDCKTLSDVLTRLEKEIPNVKISTFERLDWLKRASSLPAPVSENPIETSKEHTFHTLN 264

Query: 471  KLRPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            KLR G Q+              IELL PSV RA+VSLHP
Sbjct: 265  KLRTGSQSA---VSVPTDKVAVIELLSPSVFRALVSLHP 300



 Score =  144 bits (363), Expect(2) = e-143
 Identities = 69/107 (64%), Positives = 78/107 (72%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S++HVFR+ITEHA  ALQ+FLGIK E +L+++LHWICSYQTLFSKVCSKCG         
Sbjct: 327 SVHHVFRQITEHAAMALQHFLGIKAEIALFTLLHWICSYQTLFSKVCSKCGRLLAMDRKS 386

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPYRHFSP  + STQ ISST DQ  D   AYH GCF ED
Sbjct: 387 SLLLPPVHRPYRHFSPLESPSTQPISSTKDQGLDFPGAYHTGCFSED 433


>ref|XP_007027968.1| Serine/threonine-protein kinase irlC isoform 1 [Theobroma cacao]
            gi|508716573|gb|EOY08470.1| Serine/threonine-protein
            kinase irlC isoform 1 [Theobroma cacao]
          Length = 429

 Score =  393 bits (1009), Expect(2) = e-142
 Identities = 206/275 (74%), Positives = 229/275 (83%), Gaps = 1/275 (0%)
 Frame = -2

Query: 1176 PPQSTA-EAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIK 1000
            PP STA EAPPKQVALA++RL  A RLIAD+RLGADRLLEALF+AAQPHQS+KPLHLF +
Sbjct: 27   PPSSTAGEAPPKQVALAMDRLGHAARLIADIRLGADRLLEALFVAAQPHQSSKPLHLFRQ 86

Query: 999  EDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 820
            ED +MRQHLQDLR+IGR+LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG
Sbjct: 87   EDDSMRQHLQDLRTIGRQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 146

Query: 819  QAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSD 640
            QAGASAVDRTRLALKAFTDQK+RFFPHLDD  N Q T+  SKK   SQAL   N ++LSD
Sbjct: 147  QAGASAVDRTRLALKAFTDQKRRFFPHLDDEQNGQGTDSVSKKHRSSQALLEDNQDNLSD 206

Query: 639  CKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRP 460
            CKTLSDVL  LEK++PNLK+ TYERLDWLKRASSLP SAN++ +E+ K H+FHSSS LRP
Sbjct: 207  CKTLSDVLTSLEKDMPNLKVLTYERLDWLKRASSLPASANDNTMEVPK-HNFHSSSILRP 265

Query: 459  GLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            G Q               IELLFPSV RA+VSLHP
Sbjct: 266  GPQTV-----VSMDKVAVIELLFPSVFRAVVSLHP 295



 Score =  143 bits (361), Expect(2) = e-142
 Identities = 67/109 (61%), Positives = 81/109 (74%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXX 159
           SS+YHV+R ITEHA  ALQYFLGI++ET+L+S+LHWICSY++LF+ +CSKCG        
Sbjct: 321 SSVYHVYRHITEHAAVALQYFLGIRSETALHSLLHWICSYRSLFTDICSKCGRLLAMEKQ 380

Query: 158 XXXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPEDA 12
               LPPV RPYR FSP   SSTQAI+ST DQS     AYHIGCF ++A
Sbjct: 381 SALLLPPVHRPYRTFSPSKVSSTQAIASTGDQSCSAPGAYHIGCFSDEA 429


>ref|XP_012468122.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            isoform X1 [Gossypium raimondii]
            gi|763749117|gb|KJB16556.1| hypothetical protein
            B456_002G235400 [Gossypium raimondii]
          Length = 433

 Score =  387 bits (994), Expect(2) = e-139
 Identities = 197/275 (71%), Positives = 226/275 (82%)
 Frame = -2

Query: 1179 PPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIK 1000
            PP  +T EAPPKQVALA++RL QA RLIAD+RLGADRLLEALF+A+QPHQS+KPLHLF +
Sbjct: 31   PPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFVASQPHQSSKPLHLFRQ 90

Query: 999  EDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 820
            ED +MRQHLQDLR++G++LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG
Sbjct: 91   EDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 150

Query: 819  QAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSD 640
            QAGASAVDRTRLALKAFTDQK+RFFPHLDD  + + T+  SKK     AL   N ++LSD
Sbjct: 151  QAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASKKHRNLPALAEDNQDNLSD 210

Query: 639  CKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRP 460
            CKTLSDVL  LEKE+PNLK+ TYERLDWLKRASSLP SAN++ +E  K H+FHS+S LRP
Sbjct: 211  CKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPASANDNTMEAPK-HNFHSTSILRP 269

Query: 459  GLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
             LQN              IEL FPS+ RA+VSLHP
Sbjct: 270  ALQNV-----ASMDKVAVIELFFPSIFRAVVSLHP 299



 Score =  137 bits (345), Expect(2) = e-139
 Identities = 66/108 (61%), Positives = 80/108 (74%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXX 159
           SS+YHVFR+ITEHA  ALQYFLGI+++T+L+S+LHWICSYQTLF+KVC+KCG        
Sbjct: 325 SSVYHVFRQITEHATVALQYFLGIRSKTALHSLLHWICSYQTLFTKVCNKCGRLLAMDRQ 384

Query: 158 XXXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
               LPPV RPYR  S    SSTQ+ISST DQ  +   AYHIGCF ++
Sbjct: 385 SALILPPVHRPYRTLSVSKHSSTQSISSTLDQGSNAPEAYHIGCFSDN 432


>ref|XP_004305585.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            [Fragaria vesca subsp. vesca]
          Length = 408

 Score =  402 bits (1034), Expect(2) = e-137
 Identities = 208/279 (74%), Positives = 233/279 (83%), Gaps = 4/279 (1%)
 Frame = -2

Query: 1179 PPPQS----TAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLH 1012
            PPP S    +AEAPPKQVALA++RL QAGRLIAD+RLGADRLLEA+F+AAQPHQS KPLH
Sbjct: 13   PPPPSVGSTSAEAPPKQVALAMDRLGQAGRLIADIRLGADRLLEAMFVAAQPHQSTKPLH 72

Query: 1011 LFIKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKR 832
            LF+ ED +MRQHLQDLRSIGR+LEE+GVLN+ LRSRSNSWGLHMPLVCPDGAVVAYAWKR
Sbjct: 73   LFLNEDASMRQHLQDLRSIGRQLEESGVLNDALRSRSNSWGLHMPLVCPDGAVVAYAWKR 132

Query: 831  QLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLE 652
            QLAGQAGASAVDRTRLALKAF+DQK+RFFPHLDD ++ QS EP SKK C+S +    N E
Sbjct: 133  QLAGQAGASAVDRTRLALKAFSDQKRRFFPHLDDGLDGQSDEPLSKKPCVSPSSSTHNQE 192

Query: 651  HLSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSS 472
             L DCKTLS++LM LEK+VPNLKIFTYERLDWLKRASSLP  ANESPLE +K+H+FHSSS
Sbjct: 193  ELLDCKTLSEILMSLEKKVPNLKIFTYERLDWLKRASSLP--ANESPLETVKDHNFHSSS 250

Query: 471  KLRPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            KLR     +             IELLFPSV RA+VSLHP
Sbjct: 251  KLR-----STSLVDVATDKVAVIELLFPSVFRAVVSLHP 284



 Score =  117 bits (292), Expect(2) = e-137
 Identities = 58/107 (54%), Positives = 70/107 (65%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S+YHVF+ ITEHAG ALQYFLG++ ET+LYS+L WICSYQTLF+KVCSKC          
Sbjct: 311 SVYHVFKHITEHAGLALQYFLGVQAETALYSLLLWICSYQTLFTKVCSKCERLLSMDRQS 370

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV+RPYR FS    SS   ++ T          YH+GCF E+
Sbjct: 371 ALLLPPVNRPYRQFSTSNISSGLNLTET----------YHVGCFTEE 407


>ref|XP_011042601.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            [Populus euphratica]
          Length = 433

 Score =  390 bits (1001), Expect(2) = e-137
 Identities = 201/276 (72%), Positives = 226/276 (81%)
 Frame = -2

Query: 1182 DPPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFI 1003
            +P P S+A+APPKQVALA+ERL QA RLIADVRLGADRLLEALF+AA PHQSNKPL LF+
Sbjct: 29   NPNPPSSADAPPKQVALAMERLGQASRLIADVRLGADRLLEALFIAAVPHQSNKPLQLFV 88

Query: 1002 KEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLA 823
            KED +MRQHLQDLRS+GR+LEE+GVLNE LRSRSNSWGLH+P+VCPDGAVVAYAWKRQLA
Sbjct: 89   KEDASMRQHLQDLRSVGRQLEESGVLNETLRSRSNSWGLHLPVVCPDGAVVAYAWKRQLA 148

Query: 822  GQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLS 643
            GQAGASAVDRTRLALKAFTDQK+RFFPHLD+  + QSTEP SKK CI + L  +  E LS
Sbjct: 149  GQAGASAVDRTRLALKAFTDQKRRFFPHLDEGQDVQSTEPASKKHCIPKDLLLNYQEELS 208

Query: 642  DCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLR 463
            DCKTLSDVL  LEKE+ +LK+ TYERLDW KRASSLP SA+E+PL+  K+H FHS SKLR
Sbjct: 209  DCKTLSDVLTCLEKEMLSLKVLTYERLDWFKRASSLPASASENPLDASKDHGFHSLSKLR 268

Query: 462  PGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
                 T             IEL FPSV RAI+SLHP
Sbjct: 269  -----TVSQSAAATDKIAVIELFFPSVFRAIISLHP 299



 Score =  128 bits (322), Expect(2) = e-137
 Identities = 60/107 (56%), Positives = 75/107 (70%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S++HVFR+I+EHA  ALQ+FLG+ + T+LYSI+HWIC YQTLF+KVCSKCG         
Sbjct: 326 SVHHVFRKISEHAAMALQHFLGVSSRTALYSIVHWICCYQTLFTKVCSKCGKLLAMDRKS 385

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPY HFS    +STQ  SS  DQ  + L A+HIGCF ++
Sbjct: 386 MLLLPPVYRPYLHFSTLQIASTQTNSSAKDQGLENLGAFHIGCFTDE 432


>ref|XP_002323389.2| hypothetical protein POPTR_0016s07140g [Populus trichocarpa]
            gi|550321025|gb|EEF05150.2| hypothetical protein
            POPTR_0016s07140g [Populus trichocarpa]
          Length = 436

 Score =  389 bits (1000), Expect(2) = e-137
 Identities = 201/276 (72%), Positives = 225/276 (81%)
 Frame = -2

Query: 1182 DPPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFI 1003
            +P P  +A+APPKQVALA+ERL QA RLIADVRLGADRLLEALF+AA PHQSNKPL LF+
Sbjct: 32   NPNPPYSADAPPKQVALAMERLGQASRLIADVRLGADRLLEALFIAAVPHQSNKPLQLFV 91

Query: 1002 KEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLA 823
            KED +MRQHLQDLRS+GR+LEE+GVLNE LRSRSNSWGLH+P+VCPDGAVVAYAWKRQLA
Sbjct: 92   KEDASMRQHLQDLRSVGRQLEESGVLNETLRSRSNSWGLHLPVVCPDGAVVAYAWKRQLA 151

Query: 822  GQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLS 643
            GQAGASAVDRTRLALKAFTDQK+RFFPHLD+  + QSTEP SKK CI + L  +  E LS
Sbjct: 152  GQAGASAVDRTRLALKAFTDQKRRFFPHLDEGQDVQSTEPASKKHCIPKDLLLNYQEELS 211

Query: 642  DCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLR 463
            DCKTLSDVL  LEKE+ NLK+ TYERLDW KRASSLP SA+E+PL+  K+H FHS SKLR
Sbjct: 212  DCKTLSDVLTCLEKEMLNLKVLTYERLDWFKRASSLPASASENPLDTSKDHGFHSLSKLR 271

Query: 462  PGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
                 T             IEL FPSV RAI+SLHP
Sbjct: 272  -----TVSQSAAATDKIAVIELFFPSVFRAIISLHP 302



 Score =  127 bits (320), Expect(2) = e-137
 Identities = 60/107 (56%), Positives = 74/107 (69%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S++HVFR+I+EHA  ALQ+FLG+ + T+LYSI+HWIC YQTLF+KVCSKCG         
Sbjct: 329 SVHHVFRKISEHAAMALQHFLGVSSRTALYSIVHWICCYQTLFTKVCSKCGKLLAMDRKS 388

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPY HFS    +STQ  SS  D   + L A+HIGCF E+
Sbjct: 389 MLLLPPVYRPYLHFSTLQIASTQTNSSAKDHGLENLGAFHIGCFTEE 435


>ref|XP_012468123.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            isoform X2 [Gossypium raimondii]
            gi|763749116|gb|KJB16555.1| hypothetical protein
            B456_002G235400 [Gossypium raimondii]
          Length = 423

 Score =  387 bits (994), Expect(2) = e-135
 Identities = 197/275 (71%), Positives = 226/275 (82%)
 Frame = -2

Query: 1179 PPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIK 1000
            PP  +T EAPPKQVALA++RL QA RLIAD+RLGADRLLEALF+A+QPHQS+KPLHLF +
Sbjct: 31   PPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFVASQPHQSSKPLHLFRQ 90

Query: 999  EDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 820
            ED +MRQHLQDLR++G++LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG
Sbjct: 91   EDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 150

Query: 819  QAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSD 640
            QAGASAVDRTRLALKAFTDQK+RFFPHLDD  + + T+  SKK     AL   N ++LSD
Sbjct: 151  QAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASKKHRNLPALAEDNQDNLSD 210

Query: 639  CKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRP 460
            CKTLSDVL  LEKE+PNLK+ TYERLDWLKRASSLP SAN++ +E  K H+FHS+S LRP
Sbjct: 211  CKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPASANDNTMEAPK-HNFHSTSILRP 269

Query: 459  GLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
             LQN              IEL FPS+ RA+VSLHP
Sbjct: 270  ALQNV-----ASMDKVAVIELFFPSIFRAVVSLHP 299



 Score =  125 bits (313), Expect(2) = e-135
 Identities = 63/108 (58%), Positives = 77/108 (71%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXX 159
           SS+YHVFR+ITEHA  ALQYFLGI+++T+L+S+LHWICSYQTLF+KVC +          
Sbjct: 325 SSVYHVFRQITEHATVALQYFLGIRSKTALHSLLHWICSYQTLFTKVCKQSA-------- 376

Query: 158 XXXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
               LPPV RPYR  S    SSTQ+ISST DQ  +   AYHIGCF ++
Sbjct: 377 --LILPPVHRPYRTLSVSKHSSTQSISSTLDQGSNAPEAYHIGCFSDN 422


>ref|XP_002274655.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            isoform X1 [Vitis vinifera]
            gi|731398192|ref|XP_010653171.1| PREDICTED: mediator of
            RNA polymerase II transcription subunit 27 isoform X1
            [Vitis vinifera] gi|296085885|emb|CBI31209.3| unnamed
            protein product [Vitis vinifera]
          Length = 419

 Score =  382 bits (980), Expect(2) = e-134
 Identities = 197/274 (71%), Positives = 227/274 (82%), Gaps = 2/274 (0%)
 Frame = -2

Query: 1170 QSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIKEDT 991
            +STAEAPPKQVALA++RLAQA RLIADVRLGADRLLEALF++AQPHQ+ KPLHLF+KED+
Sbjct: 17   ESTAEAPPKQVALAMDRLAQAARLIADVRLGADRLLEALFVSAQPHQTTKPLHLFLKEDS 76

Query: 990  AMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAG 811
            +MRQHLQDLR+IG++LE++GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAG
Sbjct: 77   SMRQHLQDLRTIGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAG 136

Query: 810  ASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPES--KKQCISQALPASNLEHLSDC 637
            ASAVDRTRLALKAFTDQK+RFFPHLDD +N QS+  ES  KK C SQ    +  E LSD 
Sbjct: 137  ASAVDRTRLALKAFTDQKRRFFPHLDDGLNGQSSASESVPKKHCGSQISTVTQQEELSDY 196

Query: 636  KTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRPG 457
            +TLSDVLM +EK++PN+KIFTY+RLDWLKRAS+LP SA E  ++  KEH FH S+K R G
Sbjct: 197  RTLSDVLMHVEKDMPNMKIFTYQRLDWLKRASTLPCSAEEFLMDSSKEHDFHISNKPRLG 256

Query: 456  LQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            L                IELLFPS+ RAI+SLHP
Sbjct: 257  LLGA-----VAADKVAVIELLFPSIFRAIISLHP 285



 Score =  125 bits (313), Expect(2) = e-134
 Identities = 60/108 (55%), Positives = 74/108 (68%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S+YHVF+ +TEHA  ALQ+FLG  TET+LYS+LHWI SYQTLF++ CSKC          
Sbjct: 312 SVYHVFKHVTEHAAMALQHFLGTNTETALYSLLHWIFSYQTLFTEPCSKCKRLLSMDRQS 371

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPEDA 12
              LPPV  PYR F    +SS Q+ISST +Q+ D   AYH+GCF E+A
Sbjct: 372 DLLLPPVYHPYRSFCAIKSSSPQSISSTKNQTLDASHAYHVGCFSEEA 419


>ref|XP_007202171.1| hypothetical protein PRUPE_ppa006482mg [Prunus persica]
            gi|462397702|gb|EMJ03370.1| hypothetical protein
            PRUPE_ppa006482mg [Prunus persica]
          Length = 409

 Score =  386 bits (991), Expect(2) = e-132
 Identities = 202/271 (74%), Positives = 224/271 (82%)
 Frame = -2

Query: 1167 STAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIKEDTA 988
            +TAEAPPKQVALA+ERL+ AGRLIAD+RLGADRLLEALF+AAQPHQS KPLHLF+ ED +
Sbjct: 23   TTAEAPPKQVALAMERLSDAGRLIADIRLGADRLLEALFVAAQPHQSTKPLHLFLNEDAS 82

Query: 987  MRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 808
            MRQHL DLRS+GR+LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA
Sbjct: 83   MRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 142

Query: 807  SAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSDCKTL 628
            SAVDRTRLALKAFTDQK+RFFPHLD+  + QS E  +KKQC+S    A + E   +CKTL
Sbjct: 143  SAVDRTRLALKAFTDQKRRFFPHLDEGSSGQSNESATKKQCVSPVPAAHDQEEALECKTL 202

Query: 627  SDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRPGLQN 448
            S+VL RLEK VPNLKIFTYERLDWLKRASSLP   NESP E LK+H+FHSSSKLR G   
Sbjct: 203  SEVLARLEK-VPNLKIFTYERLDWLKRASSLP--ENESPSETLKDHNFHSSSKLRAG--- 256

Query: 447  TXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
                          IELLFPS+ RA+VSLHP
Sbjct: 257  --PLGDVAPDKVAVIELLFPSLFRAVVSLHP 285



 Score =  117 bits (293), Expect(2) = e-132
 Identities = 55/107 (51%), Positives = 71/107 (66%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           SIYHV++ ITEHA  ALQYF+G++ ET+LY++LHWICSYQTLF+KVCSKCG         
Sbjct: 312 SIYHVYKHITEHAAMALQYFIGVRAETALYTLLHWICSYQTLFTKVCSKCGRLLSMDRQS 371

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPYR FS          +S    + ++  AYH+GC+ E+
Sbjct: 372 ALLLPPVYRPYRQFS----------ASNISSNLNLARAYHVGCYSEE 408


>ref|XP_008241051.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            [Prunus mume]
          Length = 409

 Score =  385 bits (988), Expect(2) = e-132
 Identities = 204/279 (73%), Positives = 226/279 (81%), Gaps = 5/279 (1%)
 Frame = -2

Query: 1176 PPQS-----TAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLH 1012
            PP S     TAEAPPK+VALA+ERL+ AGRLIAD+RLGADRLLEALF+AAQPHQS KPLH
Sbjct: 15   PPSSSAGPTTAEAPPKRVALAMERLSDAGRLIADIRLGADRLLEALFVAAQPHQSTKPLH 74

Query: 1011 LFIKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKR 832
            LF+ ED +MRQHL DLRS+GR+LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKR
Sbjct: 75   LFLNEDASMRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKR 134

Query: 831  QLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLE 652
            QLAGQAGASAVDRTRLALKAFTDQK+RFFPHLD+  + QS E  +KKQC+S    A + E
Sbjct: 135  QLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDEGSSGQSNESATKKQCVSPVPAAHDQE 194

Query: 651  HLSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSS 472
               +CKTLS+VL RLEK VPNLKIFTYERLDWLKRASSLP   NESP E LK+H+FHSSS
Sbjct: 195  EALECKTLSEVLARLEK-VPNLKIFTYERLDWLKRASSLP--ENESPSETLKDHNFHSSS 251

Query: 471  KLRPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            KLR G                 IELLFPS+ RA+VSLHP
Sbjct: 252  KLRAG-----PLGDVAPDKVAVIELLFPSLFRAVVSLHP 285



 Score =  117 bits (294), Expect(2) = e-132
 Identities = 55/108 (50%), Positives = 72/108 (66%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           SIYHV++ ITEHA  ALQYF+G++ ET+LY++LHWICSYQTLF+KVCSKCG         
Sbjct: 312 SIYHVYKHITEHAAMALQYFIGVRAETALYTLLHWICSYQTLFTKVCSKCGRLLSMDRQS 371

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPEDA 12
              LPPV RPYR FS          +S    + ++  AYH+GC+ E++
Sbjct: 372 ALLLPPVYRPYRQFS----------ASNISSNLNLARAYHVGCYSEES 409


>ref|XP_008360597.1| PREDICTED: mediator of RNA polymerase II transcription subunit
            27-like [Malus domestica]
          Length = 411

 Score =  377 bits (968), Expect(2) = e-130
 Identities = 203/280 (72%), Positives = 225/280 (80%), Gaps = 6/280 (2%)
 Frame = -2

Query: 1176 PPQ------STAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPL 1015
            PPQ      +TAEAPPKQVA A+ERL+QA RLIAD+R+GADRLLEALF+AAQPHQS+KPL
Sbjct: 17   PPQPSFAGSTTAEAPPKQVAQAMERLSQASRLIADIRIGADRLLEALFVAAQPHQSSKPL 76

Query: 1014 HLFIKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWK 835
             LF+ ED +MRQHL DLRS+GR+LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWK
Sbjct: 77   QLFLNEDASMRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWK 136

Query: 834  RQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNL 655
            RQLAGQAGASAVDRTRLALKAFTDQK+RFFPHLDD  NDQ  E  SKKQ ISQA  A N 
Sbjct: 137  RQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDASNDQCNESASKKQRISQAPAAHNQ 196

Query: 654  EHLSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSS 475
            E   DCKTLS+VL+R+EK VP+LK+  YERLDWLKRASSLP   NES  E LK+HS+HSS
Sbjct: 197  EDGIDCKTLSEVLVRMEK-VPHLKVSIYERLDWLKRASSLP--ENESSSETLKDHSYHSS 253

Query: 474  SKLRPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            SKLR G  +              IELLFPS  RA+VSLHP
Sbjct: 254  SKLRSGPPDV------APDKVAVIELLFPSTFRAVVSLHP 287



 Score =  119 bits (297), Expect(2) = e-130
 Identities = 58/107 (54%), Positives = 71/107 (66%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           SIYHV++ ITEHA TALQYF+G++ ET+L+ +LHWICSYQTLF+KVCSKCG         
Sbjct: 314 SIYHVYKHITEHAATALQYFIGVRAETALHCLLHWICSYQTLFTKVCSKCGRLLAMDRKS 373

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPYR F+    SS          S +V  AYH+GCF E+
Sbjct: 374 AQLLPPVYRPYRQFTTLNVSS----------SLNVSGAYHVGCFSEE 410


>ref|XP_009349040.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            [Pyrus x bretschneideri]
          Length = 411

 Score =  373 bits (957), Expect(2) = e-129
 Identities = 198/271 (73%), Positives = 219/271 (80%)
 Frame = -2

Query: 1167 STAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIKEDTA 988
            +T EAPPKQVA A+ERL+QA RLIAD+R+GADRLLEALF+AAQPHQS+KPL LF+ ED +
Sbjct: 26   TTVEAPPKQVAQAMERLSQATRLIADIRIGADRLLEALFVAAQPHQSSKPLQLFLNEDAS 85

Query: 987  MRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 808
            MRQHL DLRS+GR+LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA
Sbjct: 86   MRQHLLDLRSVGRQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGA 145

Query: 807  SAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSDCKTL 628
            SAVDRTRLALKAF DQK+RFFPHLDD  NDQ  E  SKKQ ISQA  A N E   DCKTL
Sbjct: 146  SAVDRTRLALKAFNDQKRRFFPHLDDASNDQCNESASKKQRISQAPAAHNQEDGLDCKTL 205

Query: 627  SDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRPGLQN 448
            S+VL+R+EK VPNLK+  YERLDWLKRASSLP   NES  E LK+H +HSSSKLR G  +
Sbjct: 206  SEVLLRMEK-VPNLKVSIYERLDWLKRASSLP--ENESSSETLKDHGYHSSSKLRSGPPD 262

Query: 447  TXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
                          IELLFPS  RA+VSLHP
Sbjct: 263  V------APDKVAVIELLFPSTFRAVVSLHP 287



 Score =  119 bits (299), Expect(2) = e-129
 Identities = 58/107 (54%), Positives = 71/107 (66%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           SIYHV++ ITEHA TALQYF+G++ ET+L+ +LHWICSYQTLF+KVCSKCG         
Sbjct: 314 SIYHVYKHITEHAATALQYFIGVRAETALHCLLHWICSYQTLFTKVCSKCGRLLAMDRKS 373

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPPV RPYR F+    SS          S +V  AYH+GCF E+
Sbjct: 374 AQLLPPVYRPYRQFTTSNVSS----------SLNVSGAYHVGCFSEE 410


>gb|KJB16552.1| hypothetical protein B456_002G235400 [Gossypium raimondii]
          Length = 386

 Score =  387 bits (994), Expect(2) = e-126
 Identities = 197/275 (71%), Positives = 226/275 (82%)
 Frame = -2

Query: 1179 PPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIK 1000
            PP  +T EAPPKQVALA++RL QA RLIAD+RLGADRLLEALF+A+QPHQS+KPLHLF +
Sbjct: 31   PPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFVASQPHQSSKPLHLFRQ 90

Query: 999  EDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 820
            ED +MRQHLQDLR++G++LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG
Sbjct: 91   EDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 150

Query: 819  QAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSD 640
            QAGASAVDRTRLALKAFTDQK+RFFPHLDD  + + T+  SKK     AL   N ++LSD
Sbjct: 151  QAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASKKHRNLPALAEDNQDNLSD 210

Query: 639  CKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRP 460
            CKTLSDVL  LEKE+PNLK+ TYERLDWLKRASSLP SAN++ +E  K H+FHS+S LRP
Sbjct: 211  CKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPASANDNTMEAPK-HNFHSTSILRP 269

Query: 459  GLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
             LQN              IEL FPS+ RA+VSLHP
Sbjct: 270  ALQNV-----ASMDKVAVIELFFPSIFRAVVSLHP 299



 Score = 95.1 bits (235), Expect(2) = e-126
 Identities = 40/52 (76%), Positives = 50/52 (96%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCG 183
           SS+YHVFR+ITEHA  ALQYFLGI+++T+L+S+LHWICSYQTLF+KVC+KCG
Sbjct: 325 SSVYHVFRQITEHATVALQYFLGIRSKTALHSLLHWICSYQTLFTKVCNKCG 376


>ref|XP_010037314.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            [Eucalyptus grandis] gi|629082561|gb|KCW49006.1|
            hypothetical protein EUGRSUZ_K02619 [Eucalyptus grandis]
          Length = 427

 Score =  370 bits (951), Expect(2) = e-126
 Identities = 193/279 (69%), Positives = 223/279 (79%), Gaps = 2/279 (0%)
 Frame = -2

Query: 1185 PDPPP--QSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLH 1012
            P PPP  +  AEAPPKQVALA++RL+QA RLIADVRLGADR+LEALF+AAQPHQS KP  
Sbjct: 27   PTPPPVNEPRAEAPPKQVALAMDRLSQAARLIADVRLGADRILEALFVAAQPHQSTKPHR 86

Query: 1011 LFIKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKR 832
             F KED +MRQHLQDLR+IG+ LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKR
Sbjct: 87   SFTKEDASMRQHLQDLRAIGKLLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKR 146

Query: 831  QLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLE 652
            QLAGQAGASAVDRTRLALKAFTDQK+RFFPHLDD +N QS E E K+ C S+   AS  +
Sbjct: 147  QLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLNGQSLESEPKRHCGSRVSTASQED 206

Query: 651  HLSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSS 472
              S+ KTLSDVL+ +EKE+P++K+ T+ RLDWLKRASSLP+SANE+ +E  KEHSFH  +
Sbjct: 207  AHSNYKTLSDVLIHMEKEMPSVKVLTHGRLDWLKRASSLPSSANENLIEASKEHSFHGLN 266

Query: 471  KLRPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            +LRP    T             IELL PSV RA++SLHP
Sbjct: 267  RLRPSPVGT---VSVNTDKVAVIELLVPSVFRALISLHP 302



 Score =  110 bits (276), Expect(2) = e-126
 Identities = 54/106 (50%), Positives = 68/106 (64%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S++HVFR IT+HA  ALQYF+G+K ET+L S+L WI SYQTLF+KVCS+CG         
Sbjct: 329 SVHHVFRHITDHAAMALQYFVGVKAETALLSLLRWISSYQTLFTKVCSECGRLLSMDKRS 388

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPE 18
              LPPV RPY             +SST DQS ++  AYH+ C+PE
Sbjct: 389 ALLLPPVHRPY---------MDTPVSSTKDQSANLSRAYHLACYPE 425


>ref|XP_010246903.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            isoform X1 [Nelumbo nucifera]
          Length = 424

 Score =  353 bits (907), Expect(2) = e-125
 Identities = 184/275 (66%), Positives = 221/275 (80%), Gaps = 3/275 (1%)
 Frame = -2

Query: 1170 QSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIKEDT 991
            ++TAEAPPKQVALA+ERL QA RLIADVRLGADRLLEALF+AAQPHQSNKPLHL + E+ 
Sbjct: 22   ETTAEAPPKQVALAMERLGQAARLIADVRLGADRLLEALFIAAQPHQSNKPLHLIVNEEA 81

Query: 990  AMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAG 811
             MRQHLQDLR++GR+LEE+GVLN  LRSR+NSWGLHMPLVCPDGAVVAYAWKRQLAGQAG
Sbjct: 82   TMRQHLQDLRAVGRQLEESGVLNS-LRSRNNSWGLHMPLVCPDGAVVAYAWKRQLAGQAG 140

Query: 810  ASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPE---SKKQCISQALPASNLEHLSD 640
            ASAVDRTRLALKAFTDQ++RFFPHL+D  + Q++  E   SKK C SQA   ++ E  S+
Sbjct: 141  ASAVDRTRLALKAFTDQRRRFFPHLEDESSGQTSGVESGVSKKHCSSQASTLTHKEEPSE 200

Query: 639  CKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRP 460
             KTL +VL+R+EKE PN++IFTY+ LDWLKRAS+L +S NE+ +E  KE++F +S++LR 
Sbjct: 201  EKTLPEVLLRVEKEAPNMRIFTYQHLDWLKRASALSSSTNENFIESSKENNFQTSNRLRT 260

Query: 459  GLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            G                 +ELL PSV RAI+SLHP
Sbjct: 261  G-----SLGPVSADQIAAVELLVPSVFRAIISLHP 290



 Score =  124 bits (311), Expect(2) = e-125
 Identities = 56/107 (52%), Positives = 73/107 (68%)
 Frame = -3

Query: 335 SIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXXXXXXX 156
           S+YHVFR +TEHA  ALQ+FLGI T+T+LY++LHWICSY+TLF+K C KCG         
Sbjct: 317 SVYHVFRHLTEHAVKALQFFLGINTDTALYNLLHWICSYETLFTKSCCKCGRLLTIDKQS 376

Query: 155 XXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPED 15
              LPP+ RPYRH      + TQ+  S  DQS  ++ AYH+GC+ E+
Sbjct: 377 TLLLPPIIRPYRHSFTTKATVTQSSFSMKDQSSHLVPAYHVGCYSEE 423


>gb|KCW49005.1| hypothetical protein EUGRSUZ_K02619 [Eucalyptus grandis]
          Length = 432

 Score =  370 bits (951), Expect(2) = e-124
 Identities = 193/279 (69%), Positives = 223/279 (79%), Gaps = 2/279 (0%)
 Frame = -2

Query: 1185 PDPPP--QSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLH 1012
            P PPP  +  AEAPPKQVALA++RL+QA RLIADVRLGADR+LEALF+AAQPHQS KP  
Sbjct: 27   PTPPPVNEPRAEAPPKQVALAMDRLSQAARLIADVRLGADRILEALFVAAQPHQSTKPHR 86

Query: 1011 LFIKEDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKR 832
             F KED +MRQHLQDLR+IG+ LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKR
Sbjct: 87   SFTKEDASMRQHLQDLRAIGKLLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKR 146

Query: 831  QLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLE 652
            QLAGQAGASAVDRTRLALKAFTDQK+RFFPHLDD +N QS E E K+ C S+   AS  +
Sbjct: 147  QLAGQAGASAVDRTRLALKAFTDQKRRFFPHLDDGLNGQSLESEPKRHCGSRVSTASQED 206

Query: 651  HLSDCKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSS 472
              S+ KTLSDVL+ +EKE+P++K+ T+ RLDWLKRASSLP+SANE+ +E  KEHSFH  +
Sbjct: 207  AHSNYKTLSDVLIHMEKEMPSVKVLTHGRLDWLKRASSLPSSANENLIEASKEHSFHGLN 266

Query: 471  KLRPGLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
            +LRP    T             IELL PSV RA++SLHP
Sbjct: 267  RLRPSPVGT---VSVNTDKVAVIELLVPSVFRALISLHP 302



 Score =  104 bits (260), Expect(2) = e-124
 Identities = 54/111 (48%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
 Frame = -3

Query: 335 SIYHVFRRIT-----EHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCSKCGXXXX 171
           S++HVFR IT     +HA  ALQYF+G+K ET+L S+L WI SYQTLF+KVCS+CG    
Sbjct: 329 SVHHVFRHITCFSFQDHAAMALQYFVGVKAETALLSLLRWISSYQTLFTKVCSECGRLLS 388

Query: 170 XXXXXXXXLPPVSRPYRHFSPPVTSSTQAISSTNDQSPDVLSAYHIGCFPE 18
                   LPPV RPY             +SST DQS ++  AYH+ C+PE
Sbjct: 389 MDKRSALLLPPVHRPY---------MDTPVSSTKDQSANLSRAYHLACYPE 430


>ref|XP_012468124.1| PREDICTED: mediator of RNA polymerase II transcription subunit 27
            isoform X3 [Gossypium raimondii]
            gi|763749115|gb|KJB16554.1| hypothetical protein
            B456_002G235400 [Gossypium raimondii]
          Length = 405

 Score =  387 bits (994), Expect(2) = e-124
 Identities = 197/275 (71%), Positives = 226/275 (82%)
 Frame = -2

Query: 1179 PPPQSTAEAPPKQVALALERLAQAGRLIADVRLGADRLLEALFMAAQPHQSNKPLHLFIK 1000
            PP  +T EAPPKQVALA++RL QA RLIAD+RLGADRLLEALF+A+QPHQS+KPLHLF +
Sbjct: 31   PPSSTTGEAPPKQVALAMDRLGQAARLIADIRLGADRLLEALFVASQPHQSSKPLHLFRQ 90

Query: 999  EDTAMRQHLQDLRSIGRKLEETGVLNEPLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 820
            ED +MRQHLQDLR++G++LEE+GVLNE LRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG
Sbjct: 91   EDESMRQHLQDLRTVGKQLEESGVLNESLRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAG 150

Query: 819  QAGASAVDRTRLALKAFTDQKKRFFPHLDDRVNDQSTEPESKKQCISQALPASNLEHLSD 640
            QAGASAVDRTRLALKAFTDQK+RFFPHLDD  + + T+  SKK     AL   N ++LSD
Sbjct: 151  QAGASAVDRTRLALKAFTDQKRRFFPHLDDEEDGEGTDTASKKHRNLPALAEDNQDNLSD 210

Query: 639  CKTLSDVLMRLEKEVPNLKIFTYERLDWLKRASSLPTSANESPLELLKEHSFHSSSKLRP 460
            CKTLSDVL  LEKE+PNLK+ TYERLDWLKRASSLP SAN++ +E  K H+FHS+S LRP
Sbjct: 211  CKTLSDVLTNLEKEIPNLKVSTYERLDWLKRASSLPASANDNTMEAPK-HNFHSTSILRP 269

Query: 459  GLQNTXXXXXXXXXXXXXIELLFPSVLRAIVSLHP 355
             LQN              IEL FPS+ RA+VSLHP
Sbjct: 270  ALQNV-----ASMDKVAVIELFFPSIFRAVVSLHP 299



 Score = 87.4 bits (215), Expect(2) = e-124
 Identities = 37/49 (75%), Positives = 47/49 (95%)
 Frame = -3

Query: 338 SSIYHVFRRITEHAGTALQYFLGIKTETSLYSILHWICSYQTLFSKVCS 192
           SS+YHVFR+ITEHA  ALQYFLGI+++T+L+S+LHWICSYQTLF+KVC+
Sbjct: 325 SSVYHVFRQITEHATVALQYFLGIRSKTALHSLLHWICSYQTLFTKVCN 373