BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zanthoxylum22_contig00002643
         (3073 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr...  1439   0.0  
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1437   0.0  
gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sin...  1435   0.0  
ref|XP_012088095.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1349   0.0  
ref|XP_012088094.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1349   0.0  
gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]     1349   0.0  
ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prun...  1348   0.0  
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1345   0.0  
ref|XP_012491228.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1344   0.0  
ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1344   0.0  
ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1340   0.0  
ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1333   0.0  
ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1332   0.0  
ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1330   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1330   0.0  
ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1329   0.0  
ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic...  1329   0.0  
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer...  1325   0.0  
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras...  1325   0.0  
ref|XP_011467851.1| PREDICTED: DNA-directed RNA polymerase 2B, c...  1322   0.0  

>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
            gi|557533045|gb|ESR44228.1| hypothetical protein
            CICLE_v10010966mg [Citrus clementina]
          Length = 1030

 Score = 1439 bits (3726), Expect = 0.0
 Identities = 710/834 (85%), Positives = 758/834 (90%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLRDAIAKEQE CRM KH
Sbjct: 198  KIETEAWEQAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKH 257

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            K + YAPYFDQLPADMMAVITMHKLMGLLMTGG+HG+AR+++A CIIGDAIEQEVRI  F
Sbjct: 258  KVA-YAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKF 316

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                  +S+ VTTEQEKL KKV +LIKKQKLPA R+IVK +D+F  W
Sbjct: 317  LEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPW 376

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKG-LRKYGL 2358
             +D RAKVGSR+IELL QTAY+Q+ ADQL DAPPDI PAF HTL + SKE KG  +KYG+
Sbjct: 377  GQDARAKVGSRVIELLTQTAYIQSPADQLVDAPPDIFPAFTHTLRTVSKETKGGSKKYGV 436

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I C+PLVLKGLERTARHMVIPYMPMLVPPV WT YDKGAHFFLPSY MRTHGAK QR  +
Sbjct: 437  IECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTV 496

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  +KQLE VFEALDTLGNTKWR+NNRVLS++DRIW+ GG LADLVDRNDVPLPEKP+T
Sbjct: 497  KRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPET 556

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED AQLRKWQWKVR+ KKENRERHSQRCDIELKLSVARKMKDE+GFYYPHNVDFRGRAYP
Sbjct: 557  EDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYP 616

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GR LGKSGL WLKIHLANLYAGGVDKLSHEGRLAF ENH
Sbjct: 617  MHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENH 676

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCI+LTEALRSSSPETFISHIPVHQDGSCNG
Sbjct: 677  LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNG 736

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD LGAA+VNLVA EKPADVYSGIAARVL I+RRDAQ+DPA+FPDALRAKL+
Sbjct: 737  LQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIRRDAQRDPAVFPDALRAKLL 796

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            LSQVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA MEE+E+FGASCYAAKVTLTAL
Sbjct: 797  LSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTAL 856

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMF+AARGIMSWL ECAKIIASENQ V WTTP+GLPVVQPYRKLG H+VKTSLQ LTLQ
Sbjct: 857  GEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQ 916

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNFVHSLDGSHMMMTAVACRKAGL+FAGVHDSYWTHACDVDEMN
Sbjct: 917  RETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDEMN 976

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYEMPILENLL+SFQKSFP LV PPLPERGDFDLR+VL SPYFFN
Sbjct: 977  RILREKFVELYEMPILENLLDSFQKSFPKLVLPPLPERGDFDLREVLGSPYFFN 1030


>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Citrus sinensis]
          Length = 1026

 Score = 1437 bits (3719), Expect = 0.0
 Identities = 708/834 (84%), Positives = 758/834 (90%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLRDAIAKEQE CRM KH
Sbjct: 194  KIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKH 253

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            K + YAPYFDQLPADMMAVITMHKLMGLLMTGG+HG+AR+++A CIIGDAIEQEVRI  F
Sbjct: 254  KVA-YAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKF 312

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                  +S+ VTTEQEKL KKV +LIKKQKLPA R+IVK +D+F  W
Sbjct: 313  LEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPW 372

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKG-LRKYGL 2358
             +D RAKVGSR+IELL QTAY+Q+ ADQL DAPPDI PAF H L + SKE KG  +KYG+
Sbjct: 373  GQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKKYGV 432

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I C+PLVLKGLERTARHMVIPYMPMLVPPV WT YDKGAHFFLPSY MRTHGAK QR  +
Sbjct: 433  IECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTV 492

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  +KQLE VFEALDTLGNTKWR+NNRVLS++DRIW+ GG LADLVDRNDVPLPEKP+T
Sbjct: 493  KRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPET 552

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED AQLRKWQWKVR+ KKENRERHSQRCDIELKLSVARKMKDE+GFYYPHNVDFRGRAYP
Sbjct: 553  EDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYP 612

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GR LGKSGL WLKIHLANLYAGGVDKLSHEGRLAF ENH
Sbjct: 613  MHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENH 672

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCI+LTEALRSSSPETFISHIPVHQDGSCNG
Sbjct: 673  LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNG 732

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD LGAA+VNLVA EKPADVYSGIAARVL I++RDAQ+DPA+FPDALRAKL+
Sbjct: 733  LQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIQRDAQRDPAVFPDALRAKLL 792

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            LSQVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA MEE+E+FGASCYAAKVTLTAL
Sbjct: 793  LSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTAL 852

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMF+AARGIMSWL ECAKIIASENQ V WTTP+GLPVVQPYRKLG H+VKTSLQ LTLQ
Sbjct: 853  GEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQ 912

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNFVHSLDGSHMMMTAVACRKAGL+FAGVHDSYWTHACDVDEMN
Sbjct: 913  RETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDEMN 972

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYEMPILENLL+SFQKSFP LVFPPLPERGDFDLR+VL SPYFFN
Sbjct: 973  RILREKFVELYEMPILENLLDSFQKSFPKLVFPPLPERGDFDLREVLGSPYFFN 1026


>gb|KDO72326.1| hypothetical protein CISIN_1g036741mg [Citrus sinensis]
          Length = 1030

 Score = 1435 bits (3715), Expect = 0.0
 Identities = 707/834 (84%), Positives = 757/834 (90%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AA+EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLRDAIAKEQE CRM KH
Sbjct: 198  KIETEAWEKAANEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIAKEQERCRMAKH 257

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            K + YAPYFDQLPADMMAVITMHKLMGLLMTGG+HG+AR+++A CIIGDAIEQEVRI  F
Sbjct: 258  KVA-YAPYFDQLPADMMAVITMHKLMGLLMTGGEHGRARVVQAACIIGDAIEQEVRIHKF 316

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                  +S+ VTTEQEKL KKV +LIKKQKLPA R+IVK +D+F  W
Sbjct: 317  LEKTKKKNETKNKEDEEGDESNTVTTEQEKLRKKVTDLIKKQKLPAVRRIVKGQDDFKPW 376

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKG-LRKYGL 2358
             +D RAKVGSR+IELL QTAY+Q+ ADQL DAPPDI PAF H L + SKE KG  +KYG+
Sbjct: 377  GQDARAKVGSRVIELLTQTAYIQSPADQLADAPPDIFPAFTHALRTVSKETKGGSKKYGV 436

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I C+PLVLKGLERTARHMVIPYMPMLVPPV WT YDKGAHFFLPSY MRTHGAK QR  +
Sbjct: 437  IECNPLVLKGLERTARHMVIPYMPMLVPPVKWTGYDKGAHFFLPSYVMRTHGAKQQRDTV 496

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  +KQLE VFEALDTLGNTKWR+NNRVLS++DRIW+ GG LADLVDRNDVPLPEKP+T
Sbjct: 497  KRTPKKQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPET 556

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED AQLRKWQWKVR+ KKENRERHSQRCDIELKLSVARKMKDE+GFYYPHNVDFRGRAYP
Sbjct: 557  EDEAQLRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYP 616

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GR LGKSGL WLKIHLANLYAGGVDKLSHEGRLAF ENH
Sbjct: 617  MHPYLNHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENH 676

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCI+LTEALRSSSPETFISHIPVHQDGSCNG
Sbjct: 677  LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNG 736

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD LGAA+VNLVA EKPADVYSGIAARVL I++RDAQ+DPA+FPDALRAKL+
Sbjct: 737  LQHYAALGRDTLGAAAVNLVAREKPADVYSGIAARVLVIIQRDAQRDPAVFPDALRAKLL 796

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            LSQVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA MEE+E+FGASCYAAKVTLTAL
Sbjct: 797  LSQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAPMEEAELFGASCYAAKVTLTAL 856

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMF+AARGIMSWL ECAKIIASENQ V WTTP+GLPVVQPYRKLG H+VKTSLQ LTLQ
Sbjct: 857  GEMFQAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKLGRHTVKTSLQILTLQ 916

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNFVHSLDGSHMMMTAVACRKAGL+FAGVHDSYWTHACDVDEMN
Sbjct: 917  RETEKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLTFAGVHDSYWTHACDVDEMN 976

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYEMPI ENLL+SFQKSFP LVFPPLPERGDFDLR+VL SPYFFN
Sbjct: 977  RILREKFVELYEMPIFENLLDSFQKSFPKLVFPPLPERGDFDLREVLGSPYFFN 1030


>ref|XP_012088095.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X2 [Jatropha curcas]
          Length = 976

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 652/834 (78%), Positives = 738/834 (88%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA EY+ELLMDMC Q LAPNLPYMK+LFLGWFEPL+DAI+KEQE  R  K 
Sbjct: 145  KIETEAWEQAAKEYKELLMDMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELIREGKC 204

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            +A+ YAPYFDQLPADMMAVITMHKLM L+MTGG+HG AR++ A   +GDAI+QEVRI  F
Sbjct: 205  RAA-YAPYFDQLPADMMAVITMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVRIHKF 263

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   +D V  EQEKL KKV +LI+KQKLPA RQIVK +D+   W
Sbjct: 264  LEKTKKKKTRNSEKNQEEESNDMVK-EQEKLRKKVTDLIRKQKLPAVRQIVKGQDDSKPW 322

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQ-LDAPPDIRPAFAHTLGS-TSKEKKGLRKYGL 2358
            ++D +AKVGSR+IELLI+TAY+Q  ADQ  D PPDIRPAF HT  + T  E+KG R+YG+
Sbjct: 323  SQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKGSRRYGV 382

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLVLKGLER+ARHMVIPYMPMLVPPV WT YDKGAH FLPSY MRTHG + QR+A+
Sbjct: 383  IQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQREAV 442

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            ++ S++QL+ VFEALDTLG TKWRIN R+L+++DRIWNSGG LADLVDRNDVPLPE+PDT
Sbjct: 443  RQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEEPDT 502

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            E+ A L+KW+W+V+  KKEN+ERHSQRCD ELKL+VARKMKDE+GFYYPHN+DFRGRAYP
Sbjct: 503  ENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYP 562

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GRPLG SGLRWLKIHLANL+AGGVDK S++GR+AF ENH
Sbjct: 563  MHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFTENH 622

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSAD+PLEG+RWWL AEDPFQCLAVC+DLTEALRSSSPETFISHIP+HQDGSCNG
Sbjct: 623  LDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGSCNG 682

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+ GAA+VNLV GEKPADVYSGIA+RVL+IMRRDA+KDP +FPDALRAK +
Sbjct: 683  LQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRAKTL 742

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG   +ESE+FGASCYAAKVTLTAL
Sbjct: 743  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCYAAKVTLTAL 802

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IMSWL ECAK+IASEN+ V WTTP+GLPVVQPYRKLG H +KTSLQ LTLQ
Sbjct: 803  GEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 862

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            +ETEK+M+ RQRTAFPPNFVHSLDGSHMMMTAVAC++AGL+FAGVHDSYWTHACDVDEMN
Sbjct: 863  QETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVDEMN 922

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILR+KFVELYE+PILENLLESFQ+SFPTL FPPLPERGDFDLRDVLESPYFFN
Sbjct: 923  RILRQKFVELYEIPILENLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 976


>ref|XP_012088094.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Jatropha curcas]
          Length = 1007

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 652/834 (78%), Positives = 738/834 (88%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA EY+ELLMDMC Q LAPNLPYMK+LFLGWFEPL+DAI+KEQE  R  K 
Sbjct: 176  KIETEAWEQAAKEYKELLMDMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELIREGKC 235

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            +A+ YAPYFDQLPADMMAVITMHKLM L+MTGG+HG AR++ A   +GDAI+QEVRI  F
Sbjct: 236  RAA-YAPYFDQLPADMMAVITMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVRIHKF 294

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   +D V  EQEKL KKV +LI+KQKLPA RQIVK +D+   W
Sbjct: 295  LEKTKKKKTRNSEKNQEEESNDMVK-EQEKLRKKVTDLIRKQKLPAVRQIVKGQDDSKPW 353

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQ-LDAPPDIRPAFAHTLGS-TSKEKKGLRKYGL 2358
            ++D +AKVGSR+IELLI+TAY+Q  ADQ  D PPDIRPAF HT  + T  E+KG R+YG+
Sbjct: 354  SQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKGSRRYGV 413

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLVLKGLER+ARHMVIPYMPMLVPPV WT YDKGAH FLPSY MRTHG + QR+A+
Sbjct: 414  IQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQREAV 473

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            ++ S++QL+ VFEALDTLG TKWRIN R+L+++DRIWNSGG LADLVDRNDVPLPE+PDT
Sbjct: 474  RQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEEPDT 533

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            E+ A L+KW+W+V+  KKEN+ERHSQRCD ELKL+VARKMKDE+GFYYPHN+DFRGRAYP
Sbjct: 534  ENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYP 593

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GRPLG SGLRWLKIHLANL+AGGVDK S++GR+AF ENH
Sbjct: 594  MHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFTENH 653

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSAD+PLEG+RWWL AEDPFQCLAVC+DLTEALRSSSPETFISHIP+HQDGSCNG
Sbjct: 654  LDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGSCNG 713

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+ GAA+VNLV GEKPADVYSGIA+RVL+IMRRDA+KDP +FPDALRAK +
Sbjct: 714  LQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRAKTL 773

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG   +ESE+FGASCYAAKVTLTAL
Sbjct: 774  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCYAAKVTLTAL 833

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IMSWL ECAK+IASEN+ V WTTP+GLPVVQPYRKLG H +KTSLQ LTLQ
Sbjct: 834  GEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 893

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            +ETEK+M+ RQRTAFPPNFVHSLDGSHMMMTAVAC++AGL+FAGVHDSYWTHACDVDEMN
Sbjct: 894  QETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVDEMN 953

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILR+KFVELYE+PILENLLESFQ+SFPTL FPPLPERGDFDLRDVLESPYFFN
Sbjct: 954  RILRQKFVELYEIPILENLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 1007


>gb|KDP24319.1| hypothetical protein JCGZ_25615 [Jatropha curcas]
          Length = 908

 Score = 1349 bits (3492), Expect = 0.0
 Identities = 652/834 (78%), Positives = 738/834 (88%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA EY+ELLMDMC Q LAPNLPYMK+LFLGWFEPL+DAI+KEQE  R  K 
Sbjct: 77   KIETEAWEQAAKEYKELLMDMCKQKLAPNLPYMKTLFLGWFEPLKDAISKEQELIREGKC 136

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            +A+ YAPYFDQLPADMMAVITMHKLM L+MTGG+HG AR++ A   +GDAI+QEVRI  F
Sbjct: 137  RAA-YAPYFDQLPADMMAVITMHKLMALVMTGGEHGCARVVAAALTVGDAIDQEVRIHKF 195

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   +D V  EQEKL KKV +LI+KQKLPA RQIVK +D+   W
Sbjct: 196  LEKTKKKKTRNSEKNQEEESNDMVK-EQEKLRKKVTDLIRKQKLPAVRQIVKGQDDSKPW 254

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQ-LDAPPDIRPAFAHTLGS-TSKEKKGLRKYGL 2358
            ++D +AKVGSR+IELLI+TAY+Q  ADQ  D PPDIRPAF HT  + T  E+KG R+YG+
Sbjct: 255  SQDAKAKVGSRVIELLIRTAYIQPPADQRADGPPDIRPAFVHTFRTVTQGERKGSRRYGV 314

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLVLKGLER+ARHMVIPYMPMLVPPV WT YDKGAH FLPSY MRTHG + QR+A+
Sbjct: 315  IQCDPLVLKGLERSARHMVIPYMPMLVPPVKWTGYDKGAHLFLPSYVMRTHGVRQQREAV 374

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            ++ S++QL+ VFEALDTLG TKWRIN R+L+++DRIWNSGG LADLVDRNDVPLPE+PDT
Sbjct: 375  RQTSKEQLQPVFEALDTLGRTKWRINKRILAVIDRIWNSGGRLADLVDRNDVPLPEEPDT 434

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            E+ A L+KW+W+V+  KKEN+ERHSQRCD ELKL+VARKMKDE+GFYYPHN+DFRGRAYP
Sbjct: 435  ENEALLKKWKWRVKAVKKENKERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYP 494

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GRPLG SGLRWLKIHLANL+AGGVDK S++GR+AF ENH
Sbjct: 495  MHPYLNHLGSDLCRGILEFAEGRPLGNSGLRWLKIHLANLFAGGVDKFSYDGRIAFTENH 554

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSAD+PLEG+RWWL AEDPFQCLAVC+DLTEALRSSSPETFISHIP+HQDGSCNG
Sbjct: 555  LDDIFDSADRPLEGKRWWLHAEDPFQCLAVCMDLTEALRSSSPETFISHIPIHQDGSCNG 614

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+ GAA+VNLV GEKPADVYSGIA+RVL+IMRRDA+KDP +FPDALRAK +
Sbjct: 615  LQHYAALGRDKSGAAAVNLVTGEKPADVYSGIASRVLNIMRRDAEKDPVVFPDALRAKTL 674

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG   +ESE+FGASCYAAKVTLTAL
Sbjct: 675  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGFIADESEIFGASCYAAKVTLTAL 734

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IMSWL ECAK+IASEN+ V WTTP+GLPVVQPYRKLG H +KTSLQ LTLQ
Sbjct: 735  GEMFEAARSIMSWLGECAKVIASENEPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 794

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            +ETEK+M+ RQRTAFPPNFVHSLDGSHMMMTAVAC++AGL+FAGVHDSYWTHACDVDEMN
Sbjct: 795  QETEKIMIKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLTFAGVHDSYWTHACDVDEMN 854

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILR+KFVELYE+PILENLLESFQ+SFPTL FPPLPERGDFDLRDVLESPYFFN
Sbjct: 855  RILRQKFVELYEIPILENLLESFQESFPTLPFPPLPERGDFDLRDVLESPYFFN 908


>ref|XP_007214918.1| hypothetical protein PRUPE_ppa000719mg [Prunus persica]
            gi|462411068|gb|EMJ16117.1| hypothetical protein
            PRUPE_ppa000719mg [Prunus persica]
          Length = 1024

 Score = 1348 bits (3489), Expect = 0.0
 Identities = 657/834 (78%), Positives = 727/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AA EYREL+MDMC Q LAPNLPYMKSLFLGWFEPLR+AI KEQ+ CR  K+
Sbjct: 195  KIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDKEQDLCRKGKN 254

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            K ++YAPY DQLPADMM+VITMHKLMGLLMTGG+HG  R++ A C IG+AIEQEVRI  F
Sbjct: 255  K-TAYAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKF 313

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   SDA   E+EKL KKV NL+KKQKL A R IV + D   SW
Sbjct: 314  LEMTRKKKVDKDQENGE---SDAAKKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSW 370

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKGL-RKYGL 2358
            + + RAKVGSRLIELL QTA++Q  ADQL D PPDIRPAF HT  + +K+ K   R+YG+
Sbjct: 371  SLEARAKVGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGV 430

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLVLKGLE+TARHMVIPYMPMLVPP+NWT YDKG +FFLPSY MR HGA+ QR+AI
Sbjct: 431  IECDPLVLKGLEKTARHMVIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAI 490

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  R+QLE VF+ALD LGNT+WR+N RVLS++DRIW SGG LADLVDRNDVPLPE+PDT
Sbjct: 491  KRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDT 550

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED   L+KW+WKV+  KKEN ERHSQRCD ELKL+VARKMKDE+GFYYPHN+DFRGRAYP
Sbjct: 551  EDETLLKKWKWKVKSVKKENMERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYP 610

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSD+CRGILEF +GRPLGKSGL WLKIHLANLYAGGVDKLS EGR+AF ENH
Sbjct: 611  MHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENH 670

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDS DKPLEGRRWWLKAEDPFQCLAVCI+L EALRSSSPETFISHIPVHQDGSCNG
Sbjct: 671  LDDIFDSVDKPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNG 730

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAASVNLV GEKPADVYSGIA RVL+IMRRDAQKDP +FP+ALRAKL+
Sbjct: 731  LQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPVVFPEALRAKLL 790

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG+  +++E+FG +CYAAK+TLTAL
Sbjct: 791  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTAL 850

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAARGIMSWL ECAKIIASENQ V WTTP+GLPVVQPYRK G H +KTSLQ LTLQ
Sbjct: 851  GEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQ 910

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNFVHSLD SHMMMTA+AC+KAGLSFAGVHDSYWTHACDVDEMN
Sbjct: 911  RETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMN 970

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            +ILREKFV+LYE PILENLLESFQ+SFP L FPPLPERGDFDLRDVLESPYFFN
Sbjct: 971  KILREKFVQLYETPILENLLESFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Vitis vinifera] gi|731418092|ref|XP_010660553.1|
            PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial [Vitis vinifera]
            gi|298204431|emb|CBI16911.3| unnamed protein product
            [Vitis vinifera]
          Length = 1035

 Score = 1345 bits (3481), Expect = 0.0
 Identities = 653/835 (78%), Positives = 726/835 (86%), Gaps = 3/835 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+ AA EY+ELLMDMC Q LAPNLPYMKSLFLGWFEPLRDAI KEQE CR+ K+
Sbjct: 203  KIETEAWELAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDAIVKEQELCRLGKN 262

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YAPYFDQLPADMM+VITMHKL+GLLMTGG+HG  R+++A C+IGDAIEQEVRI NF
Sbjct: 263  KAA-YAPYFDQLPADMMSVITMHKLVGLLMTGGEHGSTRVVQAACVIGDAIEQEVRIHNF 321

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                    D V  EQEKL KKV NL+KKQKL AARQIVK  DN   W
Sbjct: 322  LEKTKRKKVGKDKNVEGGGF-DPVIHEQEKLRKKVTNLMKKQKLHAARQIVKGHDNSKPW 380

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQ--LDAPPDIRPAFAHTLGSTSKEKKGL-RKYG 2361
              + +AKVGSRLIELL+QTAY+Q   D    D PPDIRPAF HT  +  +E K + R++G
Sbjct: 381  GPEAKAKVGSRLIELLMQTAYIQPPVDNQLADTPPDIRPAFVHTFKTVMREAKKIGRRFG 440

Query: 2360 LIVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQA 2181
            +I CDPLV KGLERTARHMVIPY+PMLVPP+ WT YDKGAH FLPSY MRTHGA+ QR+A
Sbjct: 441  VIECDPLVKKGLERTARHMVIPYVPMLVPPLKWTGYDKGAHLFLPSYVMRTHGARQQREA 500

Query: 2180 IKRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPD 2001
            +KR  R QLE VFEAL+TLGNTKWRIN R+  ++DRIW  GGCLADLVDRNDVPLPEKPD
Sbjct: 501  VKRAPRNQLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPD 560

Query: 2000 TEDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAY 1821
            TED AQLRKW+WKV+  KK N ERHSQRCDIELKL+VARKMKDE GF+YPHN+DFRGRAY
Sbjct: 561  TEDEAQLRKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAY 620

Query: 1820 PMHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIEN 1641
            PMHPYLNHLGSDLCRGILEFA+GRPLG SGL WLKIHLANL+AGGVDKLSHEGR+ F EN
Sbjct: 621  PMHPYLNHLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTEN 680

Query: 1640 HLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCN 1461
            HLDDIFDSAD+PLEG+RWWL AEDPFQ LA CI+L+EALRSSSPET ISHIPVHQDGSCN
Sbjct: 681  HLDDIFDSADRPLEGKRWWLNAEDPFQFLAACINLSEALRSSSPETTISHIPVHQDGSCN 740

Query: 1460 GLQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKL 1281
            GLQHYAALGRD+LGA +VNLVAGEKPADVYSGIAARVLDIM+RDA+KDPA+FPDALRA++
Sbjct: 741  GLQHYAALGRDQLGATAVNLVAGEKPADVYSGIAARVLDIMKRDAEKDPAIFPDALRARI 800

Query: 1280 MLSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTA 1101
            +++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKER A  ++ E+FGA+CYAAK+TLTA
Sbjct: 801  LINQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADDVELFGAACYAAKITLTA 860

Query: 1100 LGEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTL 921
            LGEMF+AAR IMSWL +CAKIIASENQ V WTTP+GLPVVQPYRKLG H +KTSLQ LTL
Sbjct: 861  LGEMFQAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTL 920

Query: 920  QRETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEM 741
            QRETE +MV RQRTAFPPNFVHSLDGSHMMMTA+AC+KAGL+FAGVHDSYWTHACDVDEM
Sbjct: 921  QRETETIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLNFAGVHDSYWTHACDVDEM 980

Query: 740  NRILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            NR+LREKFV+LYE PILENLLESFQ+SFP L FPPLPERGDFDLR+VLESPYFFN
Sbjct: 981  NRLLREKFVQLYETPILENLLESFQQSFPALEFPPLPERGDFDLREVLESPYFFN 1035


>ref|XP_012491228.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial isoform X1 [Gossypium
            raimondii] gi|763775856|gb|KJB42979.1| hypothetical
            protein B456_007G178100 [Gossypium raimondii]
          Length = 1028

 Score = 1344 bits (3478), Expect = 0.0
 Identities = 662/834 (79%), Positives = 726/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA+EYRELL DMC Q LAPNLPYMKSLFLGWFEP RDAI KEQE  R  K 
Sbjct: 197  KIETEAWEQAANEYRELLKDMCEQKLAPNLPYMKSLFLGWFEPFRDAIIKEQELYRSGKL 256

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            +A  YA Y DQLPADM AVITMHKLMGLLMTGG+HG AR+++A C+IGDAIEQEVRIRNF
Sbjct: 257  RAG-YAAYLDQLPADMAAVITMHKLMGLLMTGGEHGCARVVQAACLIGDAIEQEVRIRNF 315

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   S+A   EQE+L KKV NLIKKQKLPA RQIVK +DN   W
Sbjct: 316  LENTRKKKVDKEDEDEGSE-SNAAIKEQERLRKKVTNLIKKQKLPAVRQIVKGQDNTKPW 374

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKE-KKGLRKYGL 2358
             +D +AKVG  LIELL++TAY+Q  ADQL D PPDIRPAF H+  +  KE KK  R+YG+
Sbjct: 375  GQDAKAKVGCHLIELLMRTAYIQPPADQLADTPPDIRPAFLHSFKTVVKENKKTGRRYGV 434

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLV KGLERTARHMVIPYMPMLVPPV WT YD+GA+ FLPSY MRTHGAK QR+A+
Sbjct: 435  IECDPLVRKGLERTARHMVIPYMPMLVPPVKWTGYDRGAYLFLPSYIMRTHGAKQQREAV 494

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR    QLE VFEALDTLG TKWRIN RVL+++DRIW SGG LAD+VDRNDVP PEKPDT
Sbjct: 495  KRTPTNQLEQVFEALDTLGYTKWRINKRVLNVVDRIWTSGGRLADMVDRNDVPFPEKPDT 554

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A LRKW+WKVR  KKENRERHSQRCDIELKL+VAR+MKDE+GFYYPHN+DFRGRAYP
Sbjct: 555  EDEALLRKWKWKVRSVKKENRERHSQRCDIELKLAVARRMKDEEGFYYPHNLDFRGRAYP 614

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRG+LEFA+GRPLG+SGL WLKIHLANL+AGGVDKLS EGRLAF ENH
Sbjct: 615  MHPYLNHLGSDLCRGVLEFAEGRPLGRSGLNWLKIHLANLFAGGVDKLSLEGRLAFTENH 674

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSAD+PLEG+RWWLKAEDPFQCLAVCI+LTEALRSSSPETF+SHIPVHQDGSCNG
Sbjct: 675  LDDIFDSADRPLEGKRWWLKAEDPFQCLAVCINLTEALRSSSPETFVSHIPVHQDGSCNG 734

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAA+VNLVAGEKPADVYSGIA RVLDIMR DAQKDP++FPDAL AK++
Sbjct: 735  LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAGRVLDIMRIDAQKDPSVFPDALLAKIL 794

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG   +E E+F ASCYAAK TLTAL
Sbjct: 795  VNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGVITDERELFVASCYAAKTTLTAL 854

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMF+AAR IM WL ECAKIIASENQ VSWTTP+GLPVVQPYR LG H +KTSLQ LTLQ
Sbjct: 855  GEMFQAARAIMIWLGECAKIIASENQPVSWTTPLGLPVVQPYRALGRHLIKTSLQVLTLQ 914

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEK+MV RQRTAFPPNFVHSLDGSHMMMTA+AC+KAGL+FAGVHDSYWTHA DVD+MN
Sbjct: 915  RETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAIACKKAGLTFAGVHDSYWTHASDVDKMN 974

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            +ILREKFVELYE PILENLLESFQ+SFP L FPPLPERGDFDLRDVL+SPYFFN
Sbjct: 975  KILREKFVELYEKPILENLLESFQQSFPALSFPPLPERGDFDLRDVLDSPYFFN 1028


>ref|XP_010257888.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like [Nelumbo nucifera]
          Length = 1031

 Score = 1344 bits (3478), Expect = 0.0
 Identities = 654/834 (78%), Positives = 733/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA EYRELLMDMC Q LAPNLPYMKSLFLGWFEPLRD I  EQE CR  K+
Sbjct: 201  KIETEAWEQAAKEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIVAEQELCRKGKN 260

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            + ++YAPYFDQLPA+MM+VITMHKLMGLLMTGG+HG  R+++A C IG+AIE EVRI  F
Sbjct: 261  R-TAYAPYFDQLPAEMMSVITMHKLMGLLMTGGEHGSCRVVQAACQIGEAIENEVRIHKF 319

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   SD V  EQ++L KKV +L+KKQKL   RQIVK +D+   W
Sbjct: 320  LEKTRKKTDKDKKADGGE--SDPVIKEQQRLRKKVTDLMKKQKLQQVRQIVKGQDDSKPW 377

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKE-KKGLRKYGL 2358
             +D +AKVGSRLIELL+QTAY+Q   DQL D PPDIRPAF H+L + +KE +K  R+YG+
Sbjct: 378  GQDAQAKVGSRLIELLMQTAYIQPPVDQLADGPPDIRPAFRHSLKTVTKEAQKTSRRYGV 437

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLV KGLERTARHMVIPYMPMLVPPVNWT YDKGA+ FLPSY MRTHGA+ QR+A+
Sbjct: 438  IECDPLVRKGLERTARHMVIPYMPMLVPPVNWTGYDKGAYLFLPSYVMRTHGARQQREAV 497

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  RKQLE VFEALDTLGNTKWR+N RVLS++DRIW SGG LADLVDR DVP+PE+PDT
Sbjct: 498  KRAPRKQLEPVFEALDTLGNTKWRVNKRVLSVVDRIWASGGRLADLVDREDVPIPEEPDT 557

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A+++KW+WKV+ AKKEN ERHSQRCDIELKL+VAR+MKDE GF+YPHN+DFRGRAYP
Sbjct: 558  EDEAEIKKWKWKVKAAKKENSERHSQRCDIELKLAVARRMKDEDGFFYPHNLDFRGRAYP 617

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GRPLGKSGL+WLKIHLANLYAGGVDKLS+EGR+AF ENH
Sbjct: 618  MHPYLNHLGSDLCRGILEFAEGRPLGKSGLQWLKIHLANLYAGGVDKLSYEGRIAFTENH 677

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSAD+PLEGRRWWL AEDPFQCLA CI+L+EALRSSSPET ISH+PVHQDGSCNG
Sbjct: 678  LDDIFDSADRPLEGRRWWLNAEDPFQCLAACINLSEALRSSSPETTISHMPVHQDGSCNG 737

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAA+VNLVAGEKPADVYSGIAARVLDIMRRDA+KDP   P+A+ A+++
Sbjct: 738  LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMRRDAEKDPETHPNAMHARIL 797

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKER    ++SE+FGASCYAAK TLTAL
Sbjct: 798  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNVIADDSELFGASCYAAKTTLTAL 857

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IMSWL +CAKIIASENQ V WTTP+GLPVVQPYRKLG H +KTSLQ LTLQ
Sbjct: 858  GEMFEAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 917

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RET+KVMV RQRTAFPPNFVHSLDGSHMMMTAVACRKAGL+FAGVHDSYWTHACD+DEMN
Sbjct: 918  RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLNFAGVHDSYWTHACDIDEMN 977

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            +ILREKFVELYE PILENLLESFQ+SFPTL FPPLPERGDFDLR+VL+SPYFFN
Sbjct: 978  KILREKFVELYEKPILENLLESFQQSFPTLNFPPLPERGDFDLREVLDSPYFFN 1031


>ref|XP_008230317.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            isoform X1 [Prunus mume]
          Length = 1024

 Score = 1340 bits (3468), Expect = 0.0
 Identities = 653/834 (78%), Positives = 724/834 (86%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AA EYREL+MDMC Q LAPNLPYMKSLFLGWFEPLR+AI  EQ+ CR  K 
Sbjct: 195  KIETEAWERAAKEYRELMMDMCEQKLAPNLPYMKSLFLGWFEPLRNAIDNEQDLCRKGKK 254

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YAPY DQLPADMM+VITMHKLMGLLMTGG+HG  R++ A C IG+AIEQEVRI  F
Sbjct: 255  KAA-YAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVAAACTIGEAIEQEVRIHKF 313

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   SDA   E+EKL KKV NL+KKQKL A R IV + D   SW
Sbjct: 314  LEMTRKKKVDKDQENGE---SDAAMKEREKLNKKVTNLMKKQKLKAVRGIVSKHDASKSW 370

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKGL-RKYGL 2358
            + + RAK+GSRLIELL QTA++Q  ADQL D PPDIRPAF HT  + +K+ K   R+YG+
Sbjct: 371  SLEARAKIGSRLIELLTQTAFIQPPADQLADGPPDIRPAFVHTFRTVAKDAKNASRRYGV 430

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLVLKGLE+TARH++IPYMPMLVPP+NWT YDKG +FFLPSY MR HGA+ QR+AI
Sbjct: 431  IECDPLVLKGLEKTARHVMIPYMPMLVPPLNWTGYDKGGYFFLPSYVMRIHGARQQREAI 490

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  R+QLE VF+ALD LGNT+WR+N RVLS++DRIW SGG LADLVDRNDVPLPE+PDT
Sbjct: 491  KRTPREQLEPVFKALDALGNTRWRVNKRVLSVVDRIWASGGHLADLVDRNDVPLPEEPDT 550

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED   L+KW+WKV+  KKEN ERHSQRCDIELKL+VARKMKDE+GFYYPHN+DFRGRAYP
Sbjct: 551  EDETLLKKWKWKVKSVKKENMERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYP 610

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSD+CRGILEF +GRPLGKSGL WLKIHLANLYAGGVDKLS EGR+AF ENH
Sbjct: 611  MHPYLNHLGSDVCRGILEFQEGRPLGKSGLSWLKIHLANLYAGGVDKLSLEGRIAFTENH 670

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDS D PLEGRRWWLKAEDPFQCLAVCI+L EALRSSSPETFISHIPVHQDGSCNG
Sbjct: 671  LDDIFDSVDIPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCNG 730

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAASVNLV GEKPADVYSGIA RVL+IMRRDAQKDP +FP+AL AKL+
Sbjct: 731  LQHYAALGRDKLGAASVNLVTGEKPADVYSGIAVRVLEIMRRDAQKDPTVFPEALHAKLL 790

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG+  +++E+FG +CYAAK+TLTAL
Sbjct: 791  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDAEIFGCACYAAKITLTAL 850

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAARGIMSWL ECAKIIASENQ V WTTP+GLPVVQPYRK G H +KTSLQ LTLQ
Sbjct: 851  GEMFEAARGIMSWLGECAKIIASENQPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLTLQ 910

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNFVHSLD SHMMMTA+AC+KAGLSFAGVHDSYWTHACDVDEMN
Sbjct: 911  RETEKVMVKRQRTAFPPNFVHSLDSSHMMMTAIACKKAGLSFAGVHDSYWTHACDVDEMN 970

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            +ILREKFVELYE PILENLL+SFQ+SFP L FPPLPERGDFDLRDVLESPYFFN
Sbjct: 971  KILREKFVELYETPILENLLKSFQQSFPALTFPPLPERGDFDLRDVLESPYFFN 1024


>ref|XP_010261414.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial-like isoform X1 [Nelumbo
            nucifera]
          Length = 990

 Score = 1333 bits (3450), Expect = 0.0
 Identities = 647/834 (77%), Positives = 730/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW+QAA EY+ELLMDMC Q LAPNLPYMKSLFLGWFEPLRD IA EQE CR  K+
Sbjct: 160  KIETEAWEQAAKEYKELLMDMCEQKLAPNLPYMKSLFLGWFEPLRDCIAAEQELCRKGKN 219

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            +A+ YAPYFDQLPA+MM+VITMHKL+GLLMTGG+HG AR+++A C+IG AIE EVRI  F
Sbjct: 220  RAA-YAPYFDQLPAEMMSVITMHKLVGLLMTGGEHGSARVVQAACLIGQAIENEVRIYKF 278

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   SD    EQ++L KKV +L+KKQKL   RQIVK +D+   W
Sbjct: 279  LEKTKKKTDKDKKAEGGE--SDPAIKEQQRLRKKVTDLMKKQKLQQVRQIVKSQDDSKPW 336

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKE-KKGLRKYGL 2358
             +D +AKVGS LIELL+QTAY+Q+ ADQL D PPDIRPAF HTL + +KE +K  R+YGL
Sbjct: 337  GQDAQAKVGSHLIELLMQTAYIQSPADQLADGPPDIRPAFRHTLKTITKESQKTSRRYGL 396

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLV KGLERTARHMVIPYMPMLVPP+NWT YDKGA+ FLPSY MRTHGA+ QR+A+
Sbjct: 397  IECDPLVRKGLERTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRTHGARQQREAV 456

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR SRKQLE +FEALDTLGNTKWRIN RVL ++DRIW SGG LADLVDR DVPLPE+P+T
Sbjct: 457  KRTSRKQLEPIFEALDTLGNTKWRINKRVLGVVDRIWASGGRLADLVDREDVPLPEEPET 516

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A+L+KW+WKV+  KKEN ERHSQRCD ELKL+VAR+MKDE GF+YPHN+DFRGRAYP
Sbjct: 517  EDEAELKKWKWKVKAVKKENSERHSQRCDTELKLAVARRMKDENGFFYPHNLDFRGRAYP 576

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GRPLGKSGLRWLKIHLANLYAGGVDKLS+EGR+AF ENH
Sbjct: 577  MHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYEGRIAFTENH 636

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            LDDIFDSAD+PLEGRRWWL A+DPFQCLAVCI+L+EALRS SPET ISHIP+HQDGSCNG
Sbjct: 637  LDDIFDSADRPLEGRRWWLNADDPFQCLAVCINLSEALRSCSPETMISHIPIHQDGSCNG 696

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAA+VNLVAG+KPADVYSG+AARVLDIMRRDAQKDP   P+A+ A+L+
Sbjct: 697  LQHYAALGRDKLGAAAVNLVAGDKPADVYSGVAARVLDIMRRDAQKDPTTEPNAMHARLL 756

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKER A  +ESE+FGASCYAAK T+TAL
Sbjct: 757  INQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERNAIADESELFGASCYAAKTTITAL 816

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMF+AAR IMSWL +CAKIIASENQ V WTTP+GLPVVQPYRKLG H +KTSLQ LTLQ
Sbjct: 817  GEMFKAARSIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGRHLIKTSLQVLTLQ 876

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RET+KVMV RQRTAFPPNF+HSLDGSHMMMTAVAC++AGL+FAGVHDS+WTHACDVDEMN
Sbjct: 877  RETDKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACKRAGLNFAGVHDSFWTHACDVDEMN 936

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            +ILREKFVELYE PI+ENLLESFQ+SFP L FPPLPE GDFDL +VL SPYFFN
Sbjct: 937  KILREKFVELYETPIMENLLESFQQSFPALSFPPLPECGDFDLHEVLVSPYFFN 990


>ref|XP_009378288.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Pyrus x bretschneideri]
          Length = 1025

 Score = 1332 bits (3448), Expect = 0.0
 Identities = 646/835 (77%), Positives = 729/835 (87%), Gaps = 3/835 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AA EYREL+MDMC   LAPNLPYMKSLFLGWFEP+R+AI KEQ+ CR  K+
Sbjct: 195  KIETEAWERAAKEYRELMMDMCEHKLAPNLPYMKSLFLGWFEPMRNAIEKEQDLCRKGKN 254

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YAPY DQLPADMM+VITMHKLMGLLMTGG+HG  R++ A C IG+AIE EVRI NF
Sbjct: 255  KAA-YAPYIDQLPADMMSVITMHKLMGLLMTGGEHGTCRVVSAACTIGEAIEHEVRIHNF 313

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   S  V  EQEKL KKV NL+KKQKL A R IV++ D    W
Sbjct: 314  LERTRKKKFNKEEENRE---SGDVLKEQEKLNKKVTNLMKKQKLQAVRHIVRKHDASKPW 370

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKGL--RKYG 2361
            ++D RAKVGSRLIELLIQT+++Q  ADQL D PPD+RPAF HT  + +K+ K    R++G
Sbjct: 371  SQDARAKVGSRLIELLIQTSFIQPPADQLADGPPDLRPAFIHTFRTVAKDPKNTSSRRFG 430

Query: 2360 LIVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQA 2181
            +I CDPLVLKG E+T  HMVIPYMPMLVPPVNWT YD+G +FFLPSY MR HGAK QR+A
Sbjct: 431  VIQCDPLVLKGFEKTGSHMVIPYMPMLVPPVNWTGYDRGGYFFLPSYVMRIHGAKQQREA 490

Query: 2180 IKRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPD 2001
            IKR   +QLE VF+ALDTLGNT+WR+N RVL+++DRIW SGG LADLVDR++VPLPE+PD
Sbjct: 491  IKRTPSEQLEPVFKALDTLGNTRWRVNKRVLNVVDRIWASGGRLADLVDRDNVPLPEEPD 550

Query: 2000 TEDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAY 1821
            T+D   L+KW+WKV+  KKEN ERHSQRCD+ELKL+VAR+MKDE+GFYYPHN+DFRGRAY
Sbjct: 551  TDDETLLKKWKWKVKSVKKENMERHSQRCDLELKLTVAREMKDEEGFYYPHNLDFRGRAY 610

Query: 1820 PMHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIEN 1641
            PMHPYLNHLGSDL RGILEFA+GRPLGKSGLRWLKIHLANLYA GVDKLS EGR+AFIEN
Sbjct: 611  PMHPYLNHLGSDLSRGILEFAEGRPLGKSGLRWLKIHLANLYASGVDKLSREGRIAFIEN 670

Query: 1640 HLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCN 1461
            HLDDIFDS D+PLEGRRWWLKAEDPFQCLAVCI+L EALRSSSPETFISHIPVHQDGSCN
Sbjct: 671  HLDDIFDSVDRPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCN 730

Query: 1460 GLQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKL 1281
            GLQHYAALGRD+LGAASVNLVAGEKPADVYSGIAARVL+IMRRDAQKDPA+FP+ALRAK+
Sbjct: 731  GLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLEIMRRDAQKDPAVFPEALRAKM 790

Query: 1280 MLSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTA 1101
            ++ QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG+  ++ E+FG +CYAAK+TLTA
Sbjct: 791  LVDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGSISDDEELFGCACYAAKITLTA 850

Query: 1100 LGEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTL 921
            LGEMFEAAR IMSWL ECAKIIASEN+ V WTTP+GLPVVQPYRK G H +KTSLQ L+L
Sbjct: 851  LGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQPYRKFGRHLIKTSLQILSL 910

Query: 920  QRETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEM 741
            Q+ET+KVMV RQRTAFPPNFVHSLD SHMMMTAVAC+KAGL+FAGVHDSYWTHACDV+EM
Sbjct: 911  QQETDKVMVKRQRTAFPPNFVHSLDSSHMMMTAVACKKAGLNFAGVHDSYWTHACDVNEM 970

Query: 740  NRILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            NRILREKFVELYE+PILENLL+SFQ+SFPTL+FPPLPERGDFDLRDVLESPYFFN
Sbjct: 971  NRILREKFVELYEIPILENLLKSFQRSFPTLIFPPLPERGDFDLRDVLESPYFFN 1025


>ref|XP_008379468.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
            [Malus domestica]
          Length = 1025

 Score = 1330 bits (3443), Expect = 0.0
 Identities = 648/835 (77%), Positives = 724/835 (86%), Gaps = 3/835 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AA EYREL+MDMC   LAPNLPYMKSLFLGWFEP+R+AI KEQ+ CR  K+
Sbjct: 195  KIETEAWERAAKEYRELMMDMCEHKLAPNLPYMKSLFLGWFEPMRNAIEKEQDLCRKGKN 254

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YAPY DQLPADMM+VITMHKLMGLLMT G+HG  R++ A C IG+AIE EVRI NF
Sbjct: 255  KAA-YAPYIDQLPADMMSVITMHKLMGLLMTXGEHGTCRVVAAACTIGEAIEHEVRIHNF 313

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   SD V  EQEKL KKV NL+KKQKL   R IV++ D    W
Sbjct: 314  LERTRKKKVNKDEENRV---SDDVLKEQEKLNKKVTNLMKKQKLQVVRHIVRKHDASKPW 370

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKGL--RKYG 2361
            ++D RAKVGSRLIELLIQTA++Q  ADQL D PPDIRPAF HT  +  K+ K    R++G
Sbjct: 371  SQDARAKVGSRLIELLIQTAFIQPPADQLADGPPDIRPAFIHTFRTVMKDPKNTSSRRFG 430

Query: 2360 LIVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQA 2181
            +I CDPLVLKG E+T  H+VIPYMPMLVPPVNWT YD+G +FFLPSY MRTHGAK QR+A
Sbjct: 431  VIQCDPLVLKGFEKTGSHLVIPYMPMLVPPVNWTGYDRGGYFFLPSYVMRTHGAKQQREA 490

Query: 2180 IKRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPD 2001
            IKR  R+QLE VF+ALDTLGNT+W++N RVL+++DRIW SGG LADLVDR++VPLPE+PD
Sbjct: 491  IKRTPREQLEPVFKALDTLGNTRWKVNKRVLNVVDRIWASGGRLADLVDRDNVPLPEEPD 550

Query: 2000 TEDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAY 1821
            TED   L+KW+WKV+  KKEN ERHSQRCD+ELKL+VAR+MKD +GFYYPHN+DFRGRAY
Sbjct: 551  TEDEKLLKKWKWKVKSVKKENMERHSQRCDLELKLTVAREMKDAEGFYYPHNLDFRGRAY 610

Query: 1820 PMHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIEN 1641
            PMHPYLNHLGSDL RGILEFA+GRPLGKSGLRWLKIHLANLYA GVDKLS EGR+AFIEN
Sbjct: 611  PMHPYLNHLGSDLSRGILEFAEGRPLGKSGLRWLKIHLANLYASGVDKLSREGRIAFIEN 670

Query: 1640 HLDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCN 1461
            HLDDIFDS D+PLEGRRWWLKAEDPFQCLAVCI+L EALRSSSPETFISHIPVHQDGSCN
Sbjct: 671  HLDDIFDSVDRPLEGRRWWLKAEDPFQCLAVCINLAEALRSSSPETFISHIPVHQDGSCN 730

Query: 1460 GLQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKL 1281
            GLQHYAALGRD+LGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPA+FP+ALRAK+
Sbjct: 731  GLQHYAALGRDKLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAVFPEALRAKV 790

Query: 1280 MLSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTA 1101
            ++ QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG   ++ E+FG +CYAAK+TLTA
Sbjct: 791  LVDQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGXISDDEELFGCACYAAKITLTA 850

Query: 1100 LGEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTL 921
            LGEMFEAAR IMSWL ECAKIIASEN+ V WTTP+GLPVVQPYRK G H +KTSLQ L+L
Sbjct: 851  LGEMFEAARSIMSWLGECAKIIASENEPVRWTTPLGLPVVQPYRKFGRHLIKTSLQVLSL 910

Query: 920  QRETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEM 741
            Q+ET+KVMV RQRTAFPPNFVHSLD SHMMMTAVAC+KAGL+FAGVHDSYWTHACDVDEM
Sbjct: 911  QQETDKVMVKRQRTAFPPNFVHSLDSSHMMMTAVACKKAGLNFAGVHDSYWTHACDVDEM 970

Query: 740  NRILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            NRILREKFVELYE+PILENLLE FQ+SFPTL FP LPERGDFDLRDVLESPYFFN
Sbjct: 971  NRILREKFVELYEIPILENLLEXFQQSFPTLAFPALPERGDFDLRDVLESPYFFN 1025


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1330 bits (3442), Expect = 0.0
 Identities = 654/834 (78%), Positives = 725/834 (86%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            K+ETEAW++AA EYRELL DMC Q LAPNLPY+KSLFLGWFEPLRD IA EQ+ C+  K+
Sbjct: 149  KMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLGWFEPLRDVIAAEQDLCKQGKN 208

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            +A+ YAPYFD LPADMMAVITMHKLMGLLMTG  +G AR+++A C IG+AIE EVRI+ F
Sbjct: 209  RAA-YAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARVVQAACHIGEAIEHEVRIQRF 267

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            +                   S+ VT EQEKL KKV+ L+KKQKL   RQIVK +D+   W
Sbjct: 268  MEKTKKKSASSNNPDGG---SNPVTKEQEKLRKKVSMLMKKQKLQQVRQIVKRQDDSKPW 324

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKE-KKGLRKYGL 2358
             +D   KVGSRLIELLI+TAY+Q  ADQL D PPDIRPAF HTL +  KE +KG R+YG+
Sbjct: 325  GQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVHTLKTVIKETQKGTRRYGV 384

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CDPLV KGLE+TARHMVIPYMPMLVPP+NWT YDKGA+ FLPSY MR HGA+ QR+AI
Sbjct: 385  IECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLFLPSYVMRIHGARQQREAI 444

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR  RK LE  FEAL+TLGNTKWRIN RVL ++DRIW SGG LADLVDR DVPLPE+PDT
Sbjct: 445  KRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDT 504

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A++RKW+WKVR  KKEN ERHSQRCDIELKL+VARKMKDE GF+YPHN+DFRGRAYP
Sbjct: 505  EDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYP 564

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHPYLNHLGSDLCRGILEFA+GRPLGKSGLRWLKIHLAN+YAGGVDKLS+EGR+AF ENH
Sbjct: 565  MHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENH 624

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            L+DIFDSAD+PLEGRRWWL AEDPFQCLA CI+L+EALRSSSPET ISH+PVHQDGSCNG
Sbjct: 625  LEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSSPETTISHMPVHQDGSCNG 684

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAA+VNLVAGEKPADVYSGIAARVLDIM+RDAQKDPA  P+ALRA+L+
Sbjct: 685  LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQRDAQKDPATEPNALRARLL 744

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            +SQVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKER A  +E EVF ASCYAAK TLTAL
Sbjct: 745  ISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADEGEVFSASCYAAKTTLTAL 804

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IMSWL +CAK+IASEN  V W TP+GLPVVQPYRKLG H +KTSLQ L+LQ
Sbjct: 805  GEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPYRKLGRHLIKTSLQVLSLQ 864

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RET+KVMV RQRTAFPPNFVHSLDGSHMMMTAVAC+KAGL+FAGVHDSYWTHACDVDEMN
Sbjct: 865  RETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNFAGVHDSYWTHACDVDEMN 924

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELY MPILENLLE FQKSFPTL FPPLPERGDFDLR+VLESPYFFN
Sbjct: 925  RILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFDLREVLESPYFFN 978


>ref|XP_009619460.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Nicotiana tomentosiformis]
          Length = 1021

 Score = 1329 bits (3439), Expect = 0.0
 Identities = 649/834 (77%), Positives = 728/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            K+ETEAW+QAA EY+ELL DMC Q LAPNLPY+KSLFLGWFEPLRD IA+EQE C   K 
Sbjct: 192  KVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKS 251

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YA Y  QLPADMMAVITMHKLMGLLMTGGDHG AR+++A  +IGDAIEQEVRI NF
Sbjct: 252  KAA-YAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNF 310

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                    + VT EQEKL KKV NL+KKQKL A  QIV+ +D+   W
Sbjct: 311  LEKTKKQKAEKDKQKED---GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPW 367

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQLDA-PPDIRPAFAHTLGSTSKEKKGL-RKYGL 2358
             +D +AKVGSRLIELL+QTAY+Q  A+QL   PPDIRPAF H++ + +KE K   R+YG+
Sbjct: 368  GQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGI 427

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CD LV KGLERTARHMVIPYMPMLVPPV WT YDKG H +LPSY MRTHGA+ QR+A+
Sbjct: 428  IQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAV 487

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR SR QL+ VFEALDTLG+TKWRIN RVLS++DRIW  GG LADLVDR+D PLPE+PDT
Sbjct: 488  KRASRNQLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDT 547

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A   KW+WKV+  KKENRERHSQRCDIELKL+VARKMKDE+GF+YPHNVDFRGRAYP
Sbjct: 548  EDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYP 607

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHP+LNHLGSD+CRG+LEFA+GRPLG+SGLRWLKIHLANL+AGGV+KLS EGR+AF ENH
Sbjct: 608  MHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENH 667

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            +DDIFDSADKPLEGRRWWL AEDPFQCLAVCI+L+EA+RSSSPET ISHIPVHQDGSCNG
Sbjct: 668  MDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNG 727

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD LGAA+VNLVAGEKPADVYSGIAARVLDIM+RDAQ+DPA FPDA+RA+ +
Sbjct: 728  LQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARAL 787

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA  ++SE+FGA+CYAAKVTLTAL
Sbjct: 788  VNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTAL 847

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IM+WL ECAKIIASEN+ V WTTP+GLPVVQPYRK+G H +KTSLQ LTLQ
Sbjct: 848  GEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQ 907

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNF+HSLDGSHMMMTAVACR+AGL+FAGVHDSYWTHACDVD++N
Sbjct: 908  RETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLN 967

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYE PILE LLESFQ S+PTL+FPPLPERGDFDLRDVLESPYFFN
Sbjct: 968  RILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021


>ref|NP_001289520.1| DNA-directed RNA polymerase 2, chloroplastic/mitochondrial [Nicotiana
            sylvestris] gi|90111039|sp|Q8VWF8.2|RPOT2_NICSY RecName:
            Full=DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial; AltName: Full=NsRpoT-B;
            AltName: Full=T7 bacteriophage-type single subunit RNA
            polymerase 2; Flags: Precursor [Nicotiana sylvestris]
            gi|21425639|emb|CAC82575.2| phage-type RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1329 bits (3439), Expect = 0.0
 Identities = 646/834 (77%), Positives = 729/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            K+ETEAW+QAA EY+ELL DMC Q LAPNLPY+KSLFLGWFEPLRD IA+EQE C   K 
Sbjct: 191  KVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKS 250

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YA YF QLPADMMAVITMHKLMGLLMTGGDHG AR+++A  +IGDAIEQEVRI NF
Sbjct: 251  KAA-YAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNF 309

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                    + VT EQEKL KKV NL+KKQKL A  QIV+ +D+   W
Sbjct: 310  LEKTKKQKAEKDKQKED---GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPW 366

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQLDA-PPDIRPAFAHTLGSTSKEKKGL-RKYGL 2358
             +D RAKVGSRLI+LL+QTAY+Q  A+QL   PPDIRPAF H++ + +KE K   R+YG+
Sbjct: 367  GQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIRPAFVHSVRTVAKETKSASRRYGI 426

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CD LV KGLERTARHMVIPYMPMLVPPV WT YDKG H +LPSY MRTHGA+ QR+A+
Sbjct: 427  IQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAV 486

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR SR QL+ VFEALDTLGNTKWRIN RVLS++DRIW  GG LADLVDR+D PLPE+PDT
Sbjct: 487  KRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDT 546

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A   KW+WKV+  KKENRERHSQRCDIELKL+VARKMKDE+ F+YPHNVDFRGRAYP
Sbjct: 547  EDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYP 606

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHP+LNHLGSD+CRG+LEFA+GRPLG+SGLRWLKIHLANL+AGGV+KLS EGR+ F ENH
Sbjct: 607  MHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENH 666

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            +DDIFDS+DKPLEGRRWWL AEDPFQCLAVCI+L+EA+RSSSPET +SHIPVHQDGSCNG
Sbjct: 667  MDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNG 726

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAA+VNLVAGEKPADVYSGIAARVLDIM+RDAQ+DPA FPDA+RA+++
Sbjct: 727  LQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARVL 786

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA  ++SE+FGA+CYAAKVTLTAL
Sbjct: 787  VNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTAL 846

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IM+WL ECAKIIASEN+ V WTTP+GLPVVQPYRK+G H +KTSLQ LTLQ
Sbjct: 847  GEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQ 906

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNF+HSLDGSHMMMTAVACR+AGL+FAGVHDSYWTHACDVD++N
Sbjct: 907  RETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLN 966

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYE PILE LLESFQ S+PTL+FPPLPERGDFD+RDVLESPYFFN
Sbjct: 967  RILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
            sylvestris] gi|17221595|dbj|BAB78465.1| T7
            bacteriophage-type single subunit RNA polymerase
            [Nicotiana sylvestris]
          Length = 1020

 Score = 1325 bits (3429), Expect = 0.0
 Identities = 644/834 (77%), Positives = 728/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            K+ETEAW+QAA EY+ELL DMC Q LAPNLPY+KSLFLGWFEPLRD IA+EQE C   K 
Sbjct: 191  KVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKS 250

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YA YF QLPADMMAVITMHKLMGLLMTGGDHG AR+++A  +IGDAIEQEVRI NF
Sbjct: 251  KAA-YAKYFYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNF 309

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                    + VT EQEKL KKV NL+KKQKL A  QIV+ +D+   W
Sbjct: 310  LEKTKKQKAEKDKQKED---GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPW 366

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQLDA-PPDIRPAFAHTLGSTSKEKKGL-RKYGL 2358
             +D RAKVGSRLI+LL+QTAY+Q  A+QL   PPDI PAF H++ + +KE K   R+YG+
Sbjct: 367  GQDARAKVGSRLIDLLLQTAYIQPPANQLAVDPPDIPPAFVHSVRTVAKETKSASRRYGI 426

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CD LV KGLERTARHMVIPYMPMLVPPV WT YDKG H +LPSY MRTHGA+ QR+A+
Sbjct: 427  IQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAV 486

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR SR QL+ VFEALDTLGNTKWRIN RVLS++DRIW  GG LADLVDR+D PLPE+PDT
Sbjct: 487  KRASRNQLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDT 546

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A L KW+WKV+  KKENRERHSQRCDIELKL+VARKMKDE+ F+YPHNVDFRGRAYP
Sbjct: 547  EDEALLPKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYP 606

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHP+LNHLGSD+CRG+LEFA+GRPLG+SGLRWLKIHLANL+AGGV+KLS EGR+ F ENH
Sbjct: 607  MHPHLNHLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENH 666

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            +DDIFDS+DKPLEGRRWWL AEDPFQCLAVCI+L+EA+RSSSPET +SHIPVHQDGSCNG
Sbjct: 667  MDDIFDSSDKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSVSHIPVHQDGSCNG 726

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD+LGAA+VNLVAGEKPA+ YSGIAARVLDIM+RDAQ+DPA FPDA+RA+++
Sbjct: 727  LQHYAALGRDKLGAAAVNLVAGEKPAEAYSGIAARVLDIMKRDAQRDPAEFPDAVRARVL 786

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA  ++SE+FGA+CYAAKVTLTAL
Sbjct: 787  VNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTAL 846

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IM+WL ECAKIIASEN+ V WTTP+GLPVVQPYRK+G H +KTSLQ LTLQ
Sbjct: 847  GEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQ 906

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            RETEKVMV RQRTAFPPNF+HSLDGSHMMMTAVACR+AGL+FAGVHDSYWTHACDVD++N
Sbjct: 907  RETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLN 966

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYE PILE LLESFQ S+PTL+FPPLPERGDFD+RDVLESPYFFN
Sbjct: 967  RILREKFVELYEAPILEKLLESFQTSYPTLLFPPLPERGDFDMRDVLESPYFFN 1020


>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial; AltName:
            Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
            single subunit RNA polymerase 2B; Flags: Precursor
            [Nicotiana tabacum] gi|21425665|emb|CAC95020.1|
            mitochondrial and chloroplast RNA polymerase [Nicotiana
            tabacum]
          Length = 1021

 Score = 1325 bits (3428), Expect = 0.0
 Identities = 647/834 (77%), Positives = 727/834 (87%), Gaps = 2/834 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            K+ETEAW+QAA EY+ELL DMC Q LAPNLPY+KSLFLGWFEPLRD IA+EQE C   K 
Sbjct: 192  KVETEAWEQAAKEYKELLFDMCEQKLAPNLPYVKSLFLGWFEPLRDKIAEEQELCSQGKS 251

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            KA+ YA Y  QLPADMMAVITMHKLMGLLMTGGDHG AR+++A  +IGDAIEQEVRI NF
Sbjct: 252  KAA-YAKYLYQLPADMMAVITMHKLMGLLMTGGDHGTARVVQAALVIGDAIEQEVRIHNF 310

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                    + VT EQEKL KKV NL+KKQKL A  QIV+ +D+   W
Sbjct: 311  LEKTKKQKAEKDKQKED---GEHVTQEQEKLRKKVTNLMKKQKLRAVGQIVRRQDDSKPW 367

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQLDA-PPDIRPAFAHTLGSTSKEKKGL-RKYGL 2358
             +D +AKVGSRLIELL+QTAY+Q  A+QL   PPDIRPAF H++ + +KE K   R+YG+
Sbjct: 368  GQDAKAKVGSRLIELLLQTAYIQPPANQLAVDPPDIRPAFLHSVRTVAKETKSASRRYGI 427

Query: 2357 IVCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAI 2178
            I CD LV KGLERTARHMVIPYMPMLVPPV WT YDKG H +LPSY MRTHGA+ QR+A+
Sbjct: 428  IQCDELVFKGLERTARHMVIPYMPMLVPPVKWTGYDKGGHLYLPSYVMRTHGARQQREAV 487

Query: 2177 KRVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDT 1998
            KR SR QL+ VFEALDTLG+TKWRIN RVLS++DRIW  GG LADLVDR+D PLPE+PDT
Sbjct: 488  KRASRNQLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDT 547

Query: 1997 EDGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYP 1818
            ED A   KW+WKV+  KKENRERHSQRCDIELKL+VARKMKDE+GF+YPHNVDFRGRAYP
Sbjct: 548  EDEALRTKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYP 607

Query: 1817 MHPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENH 1638
            MHP+LNHLGSD+CRG+L FA+GRPLG+SGLRWLKIHLANL+AGGV+KLS EGR+AF ENH
Sbjct: 608  MHPHLNHLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENH 667

Query: 1637 LDDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNG 1458
            +DDIFDSADKPLEGRRWWL AEDPFQCLAVCI+L+EA+RSSSPET ISHIPVHQDGSCNG
Sbjct: 668  MDDIFDSADKPLEGRRWWLNAEDPFQCLAVCINLSEAVRSSSPETSISHIPVHQDGSCNG 727

Query: 1457 LQHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLM 1278
            LQHYAALGRD LGAA+VNLVAGEKPADVYSGIAARVLDIM+RDAQ+DPA FPDA+RA+ +
Sbjct: 728  LQHYAALGRDELGAAAVNLVAGEKPADVYSGIAARVLDIMKRDAQRDPAEFPDAVRARAL 787

Query: 1277 LSQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTAL 1098
            ++QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERGA  ++SE+FGA+CYAAKVTLTAL
Sbjct: 788  VNQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERGAIADDSELFGAACYAAKVTLTAL 847

Query: 1097 GEMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQ 918
            GEMFEAAR IM+WL ECAKIIASEN+ V WTTP+GLPVVQPYRK+G H +KTSLQ LTLQ
Sbjct: 848  GEMFEAARSIMTWLGECAKIIASENEPVRWTTPLGLPVVQPYRKIGRHLIKTSLQILTLQ 907

Query: 917  RETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMN 738
            +ETEKVMV RQRTAFPPNF+HSLDGSHMMMTAVACR+AGL+FAGVHDSYWTHACDVD++N
Sbjct: 908  QETEKVMVKRQRTAFPPNFIHSLDGSHMMMTAVACRRAGLNFAGVHDSYWTHACDVDKLN 967

Query: 737  RILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            RILREKFVELYE PILE LLESFQ S+PTL+FPPLPERGDFDLRDVLESPYFFN
Sbjct: 968  RILREKFVELYETPILEKLLESFQTSYPTLLFPPLPERGDFDLRDVLESPYFFN 1021


>ref|XP_011467851.1| PREDICTED: DNA-directed RNA polymerase 2B,
            chloroplastic/mitochondrial [Fragaria vesca subsp. vesca]
          Length = 999

 Score = 1322 bits (3422), Expect = 0.0
 Identities = 648/833 (77%), Positives = 726/833 (87%), Gaps = 1/833 (0%)
 Frame = -3

Query: 3071 KIETEAWKQAADEYRELLMDMCAQNLAPNLPYMKSLFLGWFEPLRDAIAKEQEHCRMTKH 2892
            KIETEAW++AADEYRELLMDMC Q LAPNLPYMKSLFLGWFEPL +AI KEQ+ CR  K+
Sbjct: 173  KIETEAWERAADEYRELLMDMCEQKLAPNLPYMKSLFLGWFEPLCNAITKEQDLCRQGKN 232

Query: 2891 KASSYAPYFDQLPADMMAVITMHKLMGLLMTGGDHGQARLIRAVCIIGDAIEQEVRIRNF 2712
            K ++Y PY D+LPADMMAVITMHKLMGLLMTG +HG  R++ A C IG+AIEQEV+I NF
Sbjct: 233  K-TAYGPYMDKLPADMMAVITMHKLMGLLMTG-EHGSCRVVSAACTIGEAIEQEVKIHNF 290

Query: 2711 LXXXXXXXXXXXXXXXXXXDSDAVTTEQEKLGKKVANLIKKQKLPAARQIVKEKDNFNSW 2532
            L                   SDA   E EKL KKV NLI+K+KL A R IV+  D+  +W
Sbjct: 291  LERTKKKKVGKDQETGE---SDAAMKENEKLNKKVTNLIEKKKLQAVRHIVRGHDDSKAW 347

Query: 2531 TEDVRAKVGSRLIELLIQTAYVQASADQL-DAPPDIRPAFAHTLGSTSKEKKGLRKYGLI 2355
            +++ +AKVGSR+IELL QTA++Q  ADQL D+  DIRPAF HT  + S  K   R+YG+I
Sbjct: 348  SQEAKAKVGSRMIELLTQTAFIQPPADQLGDSLVDIRPAFVHTFKTVSNAKNTSRRYGVI 407

Query: 2354 VCDPLVLKGLERTARHMVIPYMPMLVPPVNWTSYDKGAHFFLPSYFMRTHGAKLQRQAIK 2175
             C+PLVLKGLERTARHMVIPYMPMLVPP+NWT YDKG HF+LPSY MR HGAK QR+A+K
Sbjct: 408  ECNPLVLKGLERTARHMVIPYMPMLVPPLNWTGYDKGGHFYLPSYVMRIHGAKQQREAVK 467

Query: 2174 RVSRKQLEHVFEALDTLGNTKWRINNRVLSIMDRIWNSGGCLADLVDRNDVPLPEKPDTE 1995
               R+QLE VF+ALDTLGNT+WRIN RV +++DRIW +GG LADLVDR+DVPL EKPDTE
Sbjct: 468  STPREQLEPVFKALDTLGNTRWRINKRVFNVVDRIWANGGRLADLVDRSDVPLLEKPDTE 527

Query: 1994 DGAQLRKWQWKVRDAKKENRERHSQRCDIELKLSVARKMKDEKGFYYPHNVDFRGRAYPM 1815
            D   L+KW+WKV + KKENRERHSQRCDIELKL+VARKMKDE+GFY+PHN+DFRGRAYPM
Sbjct: 528  DETLLKKWKWKVNNVKKENRERHSQRCDIELKLAVARKMKDEEGFYFPHNLDFRGRAYPM 587

Query: 1814 HPYLNHLGSDLCRGILEFAKGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRLAFIENHL 1635
            HPYLNHLGSDLCRGILEFA+GRPLGKSGLRWLKIHLANLYAGGVDKLS EGRLAF ENHL
Sbjct: 588  HPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSLEGRLAFTENHL 647

Query: 1634 DDIFDSADKPLEGRRWWLKAEDPFQCLAVCIDLTEALRSSSPETFISHIPVHQDGSCNGL 1455
            DDIFDS D+PLEGRRWWLKAEDPFQCLAVCI+LTEALRSSSPETFISHIPVHQDGSCNGL
Sbjct: 648  DDIFDSMDRPLEGRRWWLKAEDPFQCLAVCINLTEALRSSSPETFISHIPVHQDGSCNGL 707

Query: 1454 QHYAALGRDRLGAASVNLVAGEKPADVYSGIAARVLDIMRRDAQKDPAMFPDALRAKLML 1275
            QHYAALGRD+LGAA+VNLVAGEKPADVYSGIAARVL+IM+ DAQKDP +FPDALRA++++
Sbjct: 708  QHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLNIMQSDAQKDPEVFPDALRARVLV 767

Query: 1274 SQVDRKLVKQTVMTSVYGVTFIGAREQIKRRLKERGAAMEESEVFGASCYAAKVTLTALG 1095
            +QVDRKLVKQTVMTSVYGVT+IGAR+QIKRRLKERG A+ E +VFG +CYAAKVTL ALG
Sbjct: 768  NQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERG-AISEDDVFGCACYAAKVTLAALG 826

Query: 1094 EMFEAARGIMSWLSECAKIIASENQTVSWTTPIGLPVVQPYRKLGSHSVKTSLQTLTLQR 915
            +MFEAAR IMSWL +CAKIIASEN+TV WTTP+GLPVVQPYRK G H +KTSLQ LTLQR
Sbjct: 827  QMFEAARSIMSWLGDCAKIIASENETVRWTTPLGLPVVQPYRKYGRHLIKTSLQILTLQR 886

Query: 914  ETEKVMVNRQRTAFPPNFVHSLDGSHMMMTAVACRKAGLSFAGVHDSYWTHACDVDEMNR 735
            ETEK+MV RQRTAFPPNFVHSLDGSHMMMTAVAC++AGL+FAGVHDSYWTHACDVD MNR
Sbjct: 887  ETEKIMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRAGLNFAGVHDSYWTHACDVDVMNR 946

Query: 734  ILREKFVELYEMPILENLLESFQKSFPTLVFPPLPERGDFDLRDVLESPYFFN 576
            ILREKFVELYE PILE LLESFQ+SFPTL FPPLPERGDF+LRDVLESPYFFN
Sbjct: 947  ILREKFVELYETPILERLLESFQQSFPTLTFPPLPERGDFELRDVLESPYFFN 999