BLASTX nr result
ID: Zanthoxylum22_contig00002623
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zanthoxylum22_contig00002623
(1060 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr... 251 9e-64
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ... 234 1e-58
ref|XP_012065243.1| PREDICTED: DNA-directed RNA polymerases II a... 233 2e-58
ref|XP_012441059.1| PREDICTED: DNA-directed RNA polymerases II, ... 224 9e-56
ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac... 224 1e-55
gb|KHG02530.1| dna-directed rna polymerases i, ii, and iii subun... 223 2e-55
ref|XP_012453650.1| PREDICTED: DNA-directed RNA polymerases II, ... 223 3e-55
ref|XP_011037445.1| PREDICTED: DNA-directed RNA polymerases II, ... 211 1e-51
ref|XP_006376377.1| hypothetical protein POPTR_0013s12480g [Popu... 209 4e-51
ref|XP_010526383.1| PREDICTED: DNA-directed RNA polymerases II, ... 206 2e-50
ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrat... 206 3e-50
ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutr... 205 6e-50
ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana] gi|2... 204 8e-50
ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Caps... 204 8e-50
ref|XP_010520573.1| PREDICTED: DNA-directed RNA polymerases II, ... 204 1e-49
ref|XP_010469296.1| PREDICTED: DNA-directed RNA polymerases II, ... 204 1e-49
ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8... 204 1e-49
ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutr... 204 1e-49
ref|XP_010413669.1| PREDICTED: DNA-directed RNA polymerases II, ... 202 3e-49
ref|XP_010501098.1| PREDICTED: DNA-directed RNA polymerases II, ... 202 5e-49
>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Citrus
sinensis] gi|557545143|gb|ESR56121.1| hypothetical
protein CICLE_v10022723mg [Citrus clementina]
gi|641833409|gb|KDO52423.1| hypothetical protein
CISIN_1g032138mg [Citrus sinensis]
Length = 146
Score = 251 bits (640), Expect = 9e-64
Identities = 124/146 (84%), Positives = 132/146 (90%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MSNIVLFEDIFVV+K+DPDGKKFDKVSRIEAHSQNCDM+M+LDVNSE+YPMRVGDKFT+A
Sbjct: 1 MSNIVLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
LAHTLNL RK+LADKYEYIMHGKLFKI DEGSGKSLKAE+YVSYGGLL
Sbjct: 61 LAHTLNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLL 120
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
MMLKGDPSYVSHFELDQRLFLLMRKL
Sbjct: 121 MMLKGDPSYVSHFELDQRLFLLMRKL 146
>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
DNA-directed RNA polymerases I, II, and III 17.1 kDa
polypeptide, putative [Ricinus communis]
Length = 146
Score = 234 bits (596), Expect = 1e-58
Identities = 115/146 (78%), Positives = 129/146 (88%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MSNIVLFEDIFVVDK+DPDGKKFDKVSRIEAHSQNCDM M LDVN+E+YPM VGDKFT+A
Sbjct: 1 MSNIVLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
LAHTLNL RK+LADKYEYIM+GKL+KIS+EGSGK++KAE+ VSYGGLL
Sbjct: 61 LAHTLNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLL 120
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
M+L+GDPS+VSHFELDQRLFLLMRKL
Sbjct: 121 MLLRGDPSHVSHFELDQRLFLLMRKL 146
>ref|XP_012065243.1| PREDICTED: DNA-directed RNA polymerases II and V subunit 8A-like
[Jatropha curcas] gi|643737893|gb|KDP43918.1|
hypothetical protein JCGZ_20928 [Jatropha curcas]
Length = 146
Score = 233 bits (595), Expect = 2e-58
Identities = 114/146 (78%), Positives = 129/146 (88%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MSNI+LFEDIFVVDK+DPDGKKFDKVSRIEAHSQNCDM M LDVNSE+YPM VGDKFT+A
Sbjct: 1 MSNILLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNSEIYPMAVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
LAHTLNL RK+LADKYEYIMHGKL+KIS+EGSG+++KAE++VSYGGLL
Sbjct: 61 LAHTLNLDGTPDTGYYTQGARKTLADKYEYIMHGKLYKISEEGSGRNVKAEIFVSYGGLL 120
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
MMLKGDPS+V+ FELDQRLFLL+RKL
Sbjct: 121 MMLKGDPSHVNQFELDQRLFLLIRKL 146
>ref|XP_012441059.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Gossypium raimondii]
gi|763793454|gb|KJB60450.1| hypothetical protein
B456_009G353600 [Gossypium raimondii]
Length = 145
Score = 224 bits (571), Expect = 9e-56
Identities = 111/146 (76%), Positives = 128/146 (87%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MS+I+LFEDIFVVDK+DPDGKKFDKV+RIEA SQNCDM+M LDVN+E+YPM VGDKFT+A
Sbjct: 1 MSSIILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMYMHLDVNTEIYPMHVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
LAHTLNL GRKSLADKYEY+MHGKL+KI+D+ SGK LKAELYVSYGGLL
Sbjct: 61 LAHTLNL-DGTPDTGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAELYVSYGGLL 119
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
M+L+G+ S+VSHFELDQR+FLLMRKL
Sbjct: 120 MLLRGEASHVSHFELDQRIFLLMRKL 145
>ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform
1 [Theobroma cacao]
Length = 145
Score = 224 bits (570), Expect = 1e-55
Identities = 112/146 (76%), Positives = 126/146 (86%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MS+I+ FEDIFVVDK+DPDGKKFDKV+RIEA SQNCDM M LDVNSE+YPM VGDKFT+A
Sbjct: 1 MSSIIFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
LAHTLNL GRKSLADKYEY+MHGKL+K+SD+GSGK LKAE+YVSYGGLL
Sbjct: 61 LAHTLNL-DGTPDTGYYTPGRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLL 119
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
MML+G+ S+VS FELDQRLFLLMRKL
Sbjct: 120 MMLRGEASHVSQFELDQRLFLLMRKL 145
>gb|KHG02530.1| dna-directed rna polymerases i, ii, and iii subunit rpabc3
[Gossypium arboreum]
Length = 145
Score = 223 bits (568), Expect = 2e-55
Identities = 111/146 (76%), Positives = 127/146 (86%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MS+I+LFEDIFVVDK+DPDGKKFDKV+RIEA SQNCDM M LDVN+E+YPM VGDKFT+A
Sbjct: 1 MSSIILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
LAHTLNL GRKSLADKYEY+MHGKL+KI+D+ SGK LKAELYVSYGGLL
Sbjct: 61 LAHTLNL-DGTPESGYYTPGRKSLADKYEYVMHGKLYKITDDASGKGLKAELYVSYGGLL 119
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
M+L+G+ S+VSHFELDQR+FLLMRKL
Sbjct: 120 MLLRGEASHVSHFELDQRIFLLMRKL 145
>ref|XP_012453650.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Gossypium raimondii]
gi|763745331|gb|KJB12770.1| hypothetical protein
B456_002G036100 [Gossypium raimondii]
Length = 145
Score = 223 bits (567), Expect = 3e-55
Identities = 110/146 (75%), Positives = 127/146 (86%)
Frame = -3
Query: 725 MSNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLA 546
MSN++LFEDIFVVDK+DPDGKKFDKV+RIEA SQNCDM M LDVN+E+YPM VGDKFT+A
Sbjct: 1 MSNLILFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNTEIYPMHVGDKFTMA 60
Query: 545 LAHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLL 366
L+HTLNL GRKSLADKYEY+MHGKL+KISD+ SGK LKAE+YVSYGGLL
Sbjct: 61 LSHTLNL-DGTPDTGYFNPGRKSLADKYEYVMHGKLYKISDDSSGKGLKAEIYVSYGGLL 119
Query: 365 MMLKGDPSYVSHFELDQRLFLLMRKL 288
M+L+G+ S+VSHFELDQRLFLL+RKL
Sbjct: 120 MLLRGEASHVSHFELDQRLFLLIRKL 145
>ref|XP_011037445.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Populus euphratica]
gi|743885052|ref|XP_011037446.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Populus
euphratica]
Length = 148
Score = 211 bits (536), Expect = 1e-51
Identities = 101/145 (69%), Positives = 122/145 (84%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVVDK+DPDGKKFDKV+RIEAHSQNCDM M LDVN++VYPM V DKFT+AL
Sbjct: 4 SNIIMFEDIFVVDKLDPDGKKFDKVTRIEAHSQNCDMFMHLDVNTDVYPMFVNDKFTMAL 63
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
AHTLNL GRK+LADKYEY+MHGKL++I +EGS ++ + E+ +++GGLLM
Sbjct: 64 AHTLNLDGTPDTGYYTQGGRKTLADKYEYVMHGKLYQIQEEGSRRATRTEMVITFGGLLM 123
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+LKGDPSYVS FELDQRLF L+RKL
Sbjct: 124 LLKGDPSYVSQFELDQRLFCLIRKL 148
>ref|XP_006376377.1| hypothetical protein POPTR_0013s12480g [Populus trichocarpa]
gi|566200925|ref|XP_006376378.1| RNA polymerase subunit
family protein [Populus trichocarpa]
gi|550325653|gb|ERP54174.1| hypothetical protein
POPTR_0013s12480g [Populus trichocarpa]
gi|550325654|gb|ERP54175.1| RNA polymerase subunit
family protein [Populus trichocarpa]
Length = 148
Score = 209 bits (531), Expect = 4e-51
Identities = 100/145 (68%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVVDK+DPDGKKFD V+RIEAHSQNCDM M LDVN++VYPM V DKFT+AL
Sbjct: 4 SNIIMFEDIFVVDKLDPDGKKFDNVTRIEAHSQNCDMFMHLDVNTDVYPMFVNDKFTMAL 63
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
AHTLNL GRK+LADKYEY+MHGKL++I +EGS ++ + E+ +++GGLLM
Sbjct: 64 AHTLNLDGTPDTGYYTQGGRKTLADKYEYVMHGKLYQIQEEGSRRATRTEMVITFGGLLM 123
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+LKGDPSYVS FELDQRLF L+RKL
Sbjct: 124 LLKGDPSYVSQFELDQRLFCLIRKL 148
>ref|XP_010526383.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
[Tarenaya hassleriana]
Length = 146
Score = 206 bits (525), Expect = 2e-50
Identities = 100/145 (68%), Positives = 122/145 (84%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
+NI+LFEDIFVVDK+DPDGKKFDKV+RIEA S N +M M LD+N+E+YPM VG+KFT+AL
Sbjct: 3 NNIILFEDIFVVDKLDPDGKKFDKVTRIEARSHNLEMFMHLDINTEIYPMAVGEKFTMAL 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
AHTLNL +KSLADKYEY+MHGKL+KIS E GKS +AE+YVSYGGLLM
Sbjct: 63 AHTLNLDGTPDTGYYAPGVKKSLADKYEYVMHGKLYKIS-EREGKSPRAEIYVSYGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+L+GDP+++SHFELDQR+FLL+RKL
Sbjct: 122 LLQGDPAHISHFELDQRIFLLIRKL 146
>ref|XP_002891800.1| ATRPABC16.5 [Arabidopsis lyrata subsp. lyrata]
gi|297337642|gb|EFH68059.1| ATRPABC16.5 [Arabidopsis
lyrata subsp. lyrata]
Length = 146
Score = 206 bits (523), Expect = 3e-50
Identities = 104/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI+LFEDIFVVDK+DPDGKKFDKV+R++A S N +M M LDVN+EVYP+ VGDKFTLAL
Sbjct: 3 SNIILFEDIFVVDKLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLAL 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+LKGDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLKGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006402674.1| hypothetical protein EUTSA_v10006298mg [Eutrema salsugineum]
gi|567183404|ref|XP_006402675.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
gi|557103773|gb|ESQ44127.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
gi|557103774|gb|ESQ44128.1| hypothetical protein
EUTSA_v10006298mg [Eutrema salsugineum]
Length = 146
Score = 205 bits (521), Expect = 6e-50
Identities = 102/145 (70%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI+LFEDIFVVDK+DPDGKKFDKV+R+EA S N +M M LDVN+EVYPM VGDKFTLA+
Sbjct: 3 SNIILFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTLAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEY+MHGKL+KI+ E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYVMHGKLYKIT-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+L+GDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146
>ref|NP_191519.1| RNA polymerase Rpb8 [Arabidopsis thaliana]
gi|297817262|ref|XP_002876514.1| hypothetical protein
ARALYDRAFT_907465 [Arabidopsis lyrata subsp. lyrata]
gi|565468254|ref|XP_006292007.1| hypothetical protein
CARUB_v10018195mg [Capsella rubella]
gi|75335784|sp|Q9M1A8.1|RPB8B_ARATH RecName:
Full=DNA-directed RNA polymerases II, IV and V subunit
8B; AltName: Full=RNA polymerase Rpb8
gi|6996296|emb|CAB75457.1| putative protein [Arabidopsis
thaliana] gi|21554131|gb|AAM63211.1| RNA polymerase II
subunit, putative [Arabidopsis thaliana]
gi|26453032|dbj|BAC43592.1| unknown protein [Arabidopsis
thaliana] gi|30793811|gb|AAP40358.1| unknown protein
[Arabidopsis thaliana] gi|297322352|gb|EFH52773.1|
hypothetical protein ARALYDRAFT_907465 [Arabidopsis
lyrata subsp. lyrata] gi|332646423|gb|AEE79944.1| RNA
polymerase Rpb8 [Arabidopsis thaliana]
gi|482560714|gb|EOA24905.1| hypothetical protein
CARUB_v10018195mg [Capsella rubella]
Length = 146
Score = 204 bits (520), Expect = 8e-50
Identities = 102/145 (70%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVVDK+DPDGKKFDKV+R+EA S N +M M LDVN+EVYP+ VGDKFTLA+
Sbjct: 3 SNIIMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+L+GDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006305757.1| hypothetical protein CARUB_v10010575mg [Capsella rubella]
gi|482574468|gb|EOA38655.1| hypothetical protein
CARUB_v10010575mg [Capsella rubella]
Length = 146
Score = 204 bits (520), Expect = 8e-50
Identities = 103/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVV+K+DPDGKKFDKV+R+EA S N +M M LDVN+EVYPM VGDKFTLA+
Sbjct: 3 SNIIMFEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPMAVGDKFTLAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+LKGDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLKGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_010520573.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Tarenaya hassleriana]
gi|729435961|ref|XP_010520574.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Tarenaya
hassleriana]
Length = 146
Score = 204 bits (519), Expect = 1e-49
Identities = 99/144 (68%), Positives = 121/144 (84%)
Frame = -3
Query: 719 NIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLALA 540
+I++FEDIFVVDK+DPDGKKFDKV+RIEA S N +M M LD+N+E+YPM VG+KFTLALA
Sbjct: 4 SIIMFEDIFVVDKLDPDGKKFDKVTRIEARSHNLEMFMHLDINTEIYPMAVGEKFTLALA 63
Query: 539 HTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLMM 360
HTLNL ++SLADKYEY+MHGKL+KIS E GKS +AE+YVSYGGLLMM
Sbjct: 64 HTLNLDGTPDTGYYTPGLKRSLADKYEYVMHGKLYKIS-EREGKSPRAEIYVSYGGLLMM 122
Query: 359 LKGDPSYVSHFELDQRLFLLMRKL 288
L+GDP+++SHFELDQR+FLL+RKL
Sbjct: 123 LQGDPAHISHFELDQRIFLLVRKL 146
>ref|XP_010469296.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 8B
[Camelina sativa]
Length = 146
Score = 204 bits (519), Expect = 1e-49
Identities = 101/145 (69%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SN+++FEDIFVVDK+DPDGKKFDKV+R+EA S N +M M LDVN+EVYP+ VGDKFTLA+
Sbjct: 3 SNVIMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+L+GDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146
>ref|NP_175827.1| DNA-directed RNA polymerases II and V subunit 8A [Arabidopsis
thaliana] gi|75100070|sp|O81097.1|RPB8A_ARATH RecName:
Full=DNA-directed RNA polymerases II and V subunit 8A;
AltName: Full=RNA polymerase I, II and III 16.5 kDa
subunit; Short=AtRPABC16.5
gi|4585968|gb|AAD25604.1|AC005287_6 RNA polymerase I, II
and III 16.5 kDa subunit [Arabidopsis thaliana]
gi|3372230|gb|AAC28252.1| RNA polymerase I, II and III
16.5 kDa subunit [Arabidopsis thaliana]
gi|21555812|gb|AAM63939.1| RNA polymerase II subunit,
putative [Arabidopsis thaliana]
gi|28466897|gb|AAO44057.1| At1g54250 [Arabidopsis
thaliana] gi|110735704|dbj|BAE99832.1| RNA polymerase I,
II and III 16.5 kDa subunit [Arabidopsis thaliana]
gi|332194950|gb|AEE33071.1| RNA polymerase Rpb8
[Arabidopsis thaliana]
Length = 146
Score = 204 bits (519), Expect = 1e-49
Identities = 103/145 (71%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI+LFEDIFVVD++DPDGKKFDKV+R++A S N +M M LDVN+EVYP+ VGDKFTLAL
Sbjct: 3 SNIILFEDIFVVDQLDPDGKKFDKVTRVQATSHNLEMFMHLDVNTEVYPLAVGDKFTLAL 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+LKGDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLKGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_006397103.1| hypothetical protein EUTSA_v10029046mg [Eutrema salsugineum]
gi|557098120|gb|ESQ38556.1| hypothetical protein
EUTSA_v10029046mg [Eutrema salsugineum]
Length = 146
Score = 204 bits (518), Expect = 1e-49
Identities = 101/145 (69%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVVDK+DPDGKKFDKV+R+EA S N +M M LDVN+EVYPM VGDKFT+A+
Sbjct: 3 SNIIMFEDIFVVDKLDPDGKKFDKVTRVEARSHNLEMFMHLDVNTEVYPMAVGDKFTMAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KI+ E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIT-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+L+GDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_010413669.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Camelina sativa]
Length = 146
Score = 202 bits (515), Expect = 3e-49
Identities = 101/145 (69%), Positives = 120/145 (82%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVVDK+DPDGK FDKV+R+EA S N +M M LDVN+EVYP+ VGDKFTLA+
Sbjct: 3 SNIIMFEDIFVVDKLDPDGKNFDKVTRVEARSHNLEMFMHLDVNTEVYPLAVGDKFTLAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ KAELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPKAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+L+GDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLQGDPAHISHFELDQRLFLLMRKL 146
>ref|XP_010501098.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
8B-like [Camelina sativa]
gi|727439458|ref|XP_010501100.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Camelina
sativa] gi|727439460|ref|XP_010501101.1| PREDICTED:
DNA-directed RNA polymerases II, IV and V subunit
8B-like [Camelina sativa]
gi|727439462|ref|XP_010501102.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Camelina
sativa] gi|727579265|ref|XP_010462336.1| PREDICTED:
DNA-directed RNA polymerases II, IV and V subunit
8B-like [Camelina sativa]
gi|727579267|ref|XP_010462337.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Camelina
sativa] gi|727579269|ref|XP_010462339.1| PREDICTED:
DNA-directed RNA polymerases II, IV and V subunit
8B-like [Camelina sativa]
gi|727617623|ref|XP_010480017.1| PREDICTED: DNA-directed
RNA polymerases II, IV and V subunit 8B-like [Camelina
sativa] gi|727617629|ref|XP_010480018.1| PREDICTED:
DNA-directed RNA polymerases II, IV and V subunit
8B-like [Camelina sativa]
Length = 146
Score = 202 bits (513), Expect = 5e-49
Identities = 101/145 (69%), Positives = 121/145 (83%)
Frame = -3
Query: 722 SNIVLFEDIFVVDKMDPDGKKFDKVSRIEAHSQNCDMHMVLDVNSEVYPMRVGDKFTLAL 543
SNI++FEDIFVV+K+DPDGKKFDKV+R+EA S N +M M LDVN+EVYP+ VGDKFTLA+
Sbjct: 3 SNIIMFEDIFVVNKLDPDGKKFDKVTRVEATSHNLEMFMHLDVNTEVYPLAVGDKFTLAM 62
Query: 542 AHTLNLXXXXXXXXXXXXGRKSLADKYEYIMHGKLFKISDEGSGKSLKAELYVSYGGLLM 363
A TLNL +K+LADKYEYIMHGKL+KIS E GK+ +AELYVS+GGLLM
Sbjct: 63 APTLNLDGTPDTGYFTPGAKKTLADKYEYIMHGKLYKIS-ERDGKTPQAELYVSFGGLLM 121
Query: 362 MLKGDPSYVSHFELDQRLFLLMRKL 288
+LKGDP+++SHFELDQRLFLLMRKL
Sbjct: 122 LLKGDPAHISHFELDQRLFLLMRKL 146