BLASTX nr result
ID: Wisteria21_contig00040183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Wisteria21_contig00040183
(230 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009175759.1| RNA polymerase beta subunit (chloroplast) [A... 154 3e-35
gb|AJE72728.1| RNA polymerase beta subunit (plastid) [Astragalus... 154 3e-35
gb|AJE72231.1| RNA polymerase beta subunit (plastid) [Oxytropis ... 154 3e-35
gb|AJE71734.1| RNA polymerase beta subunit (plastid) [Astragalus... 154 3e-35
ref|YP_009161288.1| RpoB (chloroplast) [Wisteria floribunda] gi|... 154 3e-35
ref|YP_009027272.1| RNA polymerase beta subunit (chloroplast) [G... 154 3e-35
ref|YP_009141536.1| RNA polymerase beta subunit (chloroplast) [L... 152 1e-34
ref|NP_084796.1| RNA polymerase beta subunit [Lotus japonicus] g... 152 1e-34
ref|YP_009172269.1| RNA polymerase beta subunit (chloroplast) [C... 151 2e-34
ref|YP_005089488.1| rpoB gene product (chloroplast) [Silene coni... 151 2e-34
ref|YP_009166217.1| RNA polymerase beta subunit (chloroplast) [P... 151 2e-34
gb|AKZ23875.1| RNA polymerase beta subunit (plastid) [Silene ant... 151 2e-34
gb|AKZ23846.1| RNA polymerase beta subunit (plastid) [Ellisia ny... 151 2e-34
ref|YP_009163472.1| RNA polymerase beta subunit (plastid) [Eugen... 151 2e-34
ref|YP_398851.1| RNA polymerase beta subunit [Nicotiana tomentos... 151 2e-34
sp|Q589C0.1|RPOB_SILLA RecName: Full=DNA-directed RNA polymerase... 151 2e-34
ref|NP_783224.1| RNA polymerase beta subunit [Atropa belladonna]... 151 2e-34
ref|NP_054488.1| RNA polymerase beta subunit [Nicotiana tabacum]... 151 2e-34
prf||1211235T RNA polymerase beta 151 2e-34
ref|YP_009122856.1| RNA polymerase beta subunit (chloroplast) [C... 151 2e-34
>ref|YP_009175759.1| RNA polymerase beta subunit (chloroplast) [Astragalus nakaianus]
gi|937180886|gb|ALH42737.1| RNA polymerase beta subunit
(chloroplast) [Astragalus nakaianus]
Length = 1070
Score = 154 bits (388), Expect = 3e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>gb|AJE72728.1| RNA polymerase beta subunit (plastid) [Astragalus crassicarpus]
Length = 1070
Score = 154 bits (388), Expect = 3e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>gb|AJE72231.1| RNA polymerase beta subunit (plastid) [Oxytropis lambertii]
Length = 1070
Score = 154 bits (388), Expect = 3e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>gb|AJE71734.1| RNA polymerase beta subunit (plastid) [Astragalus canadensis]
Length = 1070
Score = 154 bits (388), Expect = 3e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009161288.1| RpoB (chloroplast) [Wisteria floribunda]
gi|743433714|gb|AJC10037.1| RpoB (chloroplast) [Wisteria
floribunda]
Length = 1070
Score = 154 bits (388), Expect = 3e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009027272.1| RNA polymerase beta subunit (chloroplast) [Glycyrrhiza glabra]
gi|532693463|gb|AGU00068.1| RNA polymerase beta subunit
(chloroplast) [Glycyrrhiza glabra]
Length = 1070
Score = 154 bits (388), Expect = 3e-35
Identities = 76/76 (100%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009141536.1| RNA polymerase beta subunit (chloroplast) [Lens culinaris]
gi|545690136|gb|AGW45901.1| RNA polymerase beta subunit
[Lens culinaris] gi|675298442|gb|AIL56062.1| RNA
polymerase beta subunit (chloroplast) [Lens culinaris]
Length = 1070
Score = 152 bits (384), Expect = 1e-34
Identities = 75/76 (98%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLD+TNPLTQIVHG
Sbjct: 375 SQVLDQTNPLTQIVHG 390
>ref|NP_084796.1| RNA polymerase beta subunit [Lotus japonicus]
gi|23822111|sp|Q9BBS9.1|RPOB_LOTJA RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|13358977|dbj|BAB33194.1| RNA polymerase beta subunit
[Lotus japonicus]
Length = 1070
Score = 152 bits (384), Expect = 1e-34
Identities = 74/76 (97%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENMVRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009172269.1| RNA polymerase beta subunit (chloroplast) [Colobanthus quitensis]
gi|930616888|gb|ALF99625.1| RNA polymerase beta subunit
(chloroplast) [Colobanthus quitensis]
Length = 1071
Score = 151 bits (382), Expect = 2e-34
Identities = 74/76 (97%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN+IRGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVIRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_005089488.1| rpoB gene product (chloroplast) [Silene conica]
gi|329755431|gb|AEC03995.1| RNA polymerase beta subunit
(chloroplast) [Silene conica]
Length = 1070
Score = 151 bits (382), Expect = 2e-34
Identities = 74/76 (97%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN+IRGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVIRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009166217.1| RNA polymerase beta subunit (chloroplast) [Piper kadsura]
gi|918056527|gb|AKZ89411.1| RNA polymerase beta subunit
(chloroplast) [Piper kadsura]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>gb|AKZ23875.1| RNA polymerase beta subunit (plastid) [Silene antirrhina]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>gb|AKZ23846.1| RNA polymerase beta subunit (plastid) [Ellisia nyctelea]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009163472.1| RNA polymerase beta subunit (plastid) [Eugenia uniflora]
gi|913022772|gb|AKU71470.1| RNA polymerase beta subunit
(plastid) [Eugenia uniflora]
Length = 1072
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_398851.1| RNA polymerase beta subunit [Nicotiana tomentosiformis]
gi|88909146|sp|Q33C46.1|RPOB_NICTO RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|80750913|dbj|BAE47989.1| RNA polymerase beta subunit
[Nicotiana tomentosiformis]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>sp|Q589C0.1|RPOB_SILLA RecName: Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
(chloroplast) [Silene latifolia]
gi|62149315|dbj|BAD93457.1| RNA polymerase beta chain
[Silene latifolia]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|NP_783224.1| RNA polymerase beta subunit [Atropa belladonna]
gi|41017766|sp|Q8S8X9.1|RPOB_ATRBE RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|20068323|emb|CAC88036.1| RNA polymerase beta subunit
[Atropa belladonna]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|NP_054488.1| RNA polymerase beta subunit [Nicotiana tabacum]
gi|78102523|ref|YP_358664.1| RNA polymerase beta subunit
[Nicotiana sylvestris] gi|133424|sp|P06271.1|RPOB_TOBAC
RecName: Full=DNA-directed RNA polymerase subunit beta;
AltName: Full=PEP; AltName: Full=Plastid-encoded RNA
polymerase subunit beta; Short=RNA polymerase subunit
beta gi|88909145|sp|Q3C1G7.1|RPOB_NICSY RecName:
Full=DNA-directed RNA polymerase subunit beta; AltName:
Full=PEP; AltName: Full=Plastid-encoded RNA polymerase
subunit beta; Short=RNA polymerase subunit beta
gi|11781|emb|CAA31238.1| unnamed protein product
[Nicotiana tabacum] gi|11822|emb|CAA77346.1| RNA
polymerase beta subunit [Nicotiana tabacum]
gi|77799550|dbj|BAE46639.1| RNA polymerase beta subunit
[Nicotiana sylvestris]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>prf||1211235T RNA polymerase beta
Length = 1000
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390
>ref|YP_009122856.1| RNA polymerase beta subunit (chloroplast) [Capsicum lycianthoides]
gi|756141158|gb|AJK90739.1| RNA polymerase beta subunit
(chloroplast) [Capsicum lycianthoides]
Length = 1070
Score = 151 bits (381), Expect = 2e-34
Identities = 73/76 (96%), Positives = 76/76 (100%)
Frame = -3
Query: 228 RSVADLLQDQFGLALVRLENIIRGTICGAIRYKLIPTPQNLVTSTPLTTTYESFFGLHPL 49
RSVADLLQDQFGLALVRLEN++RGTICGAIR+KLIPTPQNLVTSTPLTTTYESFFGLHPL
Sbjct: 315 RSVADLLQDQFGLALVRLENVVRGTICGAIRHKLIPTPQNLVTSTPLTTTYESFFGLHPL 374
Query: 48 SQVLDRTNPLTQIVHG 1
SQVLDRTNPLTQIVHG
Sbjct: 375 SQVLDRTNPLTQIVHG 390