BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00039329
         (464 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606033.1| DNA-directed RNA polymerase subunit beta [Me...   136   6e-34
ref|XP_003600568.1| DNA-directed RNA polymerase subunit beta [Me...   136   7e-34
gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedice...   122   9e-30
ref|YP_009141611.1| RNA polymerase beta (chloroplast) [Medicago ...   128   1e-27
ref|YP_009141276.1| RNA polymerase beta (chloroplast) [Lathyrus ...   128   1e-27
emb|CDY21192.1| BnaA01g34230D [Brassica napus]                        127   3e-27
gb|KFK40391.1| hypothetical protein AALP_AA3G367400 [Arabis alpina]   127   3e-27
gb|AIK21453.1| RNA polymerase beta (chloroplast) [Pisum sativum]      127   4e-27
ref|YP_009141793.1| RNA polymerase beta (chloroplast) [Vicia sat...   125   1e-26
gb|AIJ28181.1| RNA polymerase beta (chloroplast) [Trifolium occi...   125   1e-26
gb|AIJ28041.1| RNA polymerase beta (chloroplast) [Trifolium lupi...   125   1e-26
gb|AGW45902.1| RNA polymerase beta [Lens culinaris]                   125   1e-26
ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arab...   125   2e-26
ref|YP_009138791.1| RNA polymerase beta (chloroplast) [Lathyrus ...   124   2e-26
gb|AIK20829.1| RNA polymerase beta (chloroplast) [Lathyrus japon...   124   2e-26
ref|YP_009138535.1| RNA polymerase beta (chloroplast) [Lathyrus ...   124   2e-26
ref|YP_009109856.1| RNA polymerase beta (chloroplast) [Trifolium...   124   2e-26
gb|AHH80690.1| RNA polymerase beta [Gossypium laxum]                  124   4e-26
ref|YP_008963385.1| RNA polymerase beta (chloroplast) [Sedum sar...   124   4e-26
ref|YP_009164491.1| RNA polymerase beta (chloroplast) [Sedum ory...   123   4e-26

>ref|XP_003606033.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
            gi|355507088|gb|AES88230.1| DNA-directed RNA polymerase
            subunit beta [Medicago truncatula]
          Length = 1748

 Score =  136 bits (342), Expect(2) = 6e-34
 Identities = 66/72 (91%), Positives = 68/72 (94%)
 Frame = -2

Query: 217  RGRSYWIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREI 38
            +G  + IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREI
Sbjct: 1209 KGEIHLIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREI 1268

Query: 37   SSGAGAIRVQLV 2
            SSGAGAIR QLV
Sbjct: 1269 SSGAGAIREQLV 1280



 Score = 34.7 bits (78), Expect(2) = 6e-34
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 251  RMRGNPHVRFGKGEILL 201
            RMRGNPHVRF KGEI L
Sbjct: 1198 RMRGNPHVRFSKGEIHL 1214


>ref|XP_003600568.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
           gi|357460575|ref|XP_003600569.1| DNA-directed RNA
           polymerase subunit beta [Medicago truncatula]
           gi|355489616|gb|AES70819.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
           gi|657393738|gb|KEH34529.1| DNA-directed RNA polymerase
           subunit beta [Medicago truncatula]
          Length = 710

 Score =  136 bits (342), Expect(2) = 7e-34
 Identities = 66/72 (91%), Positives = 68/72 (94%)
 Frame = -2

Query: 217 RGRSYWIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREI 38
           +G  + IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREI
Sbjct: 157 KGEIHLIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREI 216

Query: 37  SSGAGAIRVQLV 2
           SSGAGAIR QLV
Sbjct: 217 SSGAGAIREQLV 228



 Score = 34.7 bits (78), Expect(2) = 7e-34
 Identities = 15/17 (88%), Positives = 15/17 (88%)
 Frame = -1

Query: 251 RMRGNPHVRFGKGEILL 201
           RMRGNPHVRF KGEI L
Sbjct: 146 RMRGNPHVRFSKGEIHL 162


>gb|AGW97687.1| RNA polymerase beta (chloroplast) [Ipomoea pedicellaris]
          Length = 718

 Score =  122 bits (306), Expect(2) = 9e-30
 Identities = 58/65 (89%), Positives = 60/65 (92%)
 Frame = -2

Query: 199 IGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGA 20
           I SYPNFSFARP+ KKPTFLRLRG FEYEIQSWKYSIPLFF TQGFDTFRNREIS+GAGA
Sbjct: 177 IESYPNFSFARPITKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGA 236

Query: 19  IRVQL 5
           IR QL
Sbjct: 237 IREQL 241



 Score = 34.7 bits (78), Expect(2) = 9e-30
 Identities = 14/21 (66%), Positives = 16/21 (76%)
 Frame = -1

Query: 275 FILCNYFSRMRGNPHVRFGKG 213
           FI C Y SRM+GN HVRF +G
Sbjct: 153 FIWCTYLSRMKGNIHVRFRRG 173


>ref|YP_009141611.1| RNA polymerase beta (chloroplast) [Medicago hybrida]
           gi|827045348|ref|YP_009141686.1| RNA polymerase beta
           (chloroplast) [Medicago papillosa]
           gi|675298517|gb|AIL56136.1| RNA polymerase beta
           (chloroplast) [Medicago hybrida]
           gi|675298593|gb|AIL56211.1| RNA polymerase beta
           (chloroplast) [Medicago papillosa]
          Length = 688

 Score =  128 bits (322), Expect = 1e-27
 Identities = 62/63 (98%), Positives = 62/63 (98%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>ref|YP_009141276.1| RNA polymerase beta (chloroplast) [Lathyrus clymenum]
           gi|675298177|gb|AIL55801.1| RNA polymerase beta
           (chloroplast) [Lathyrus clymenum]
          Length = 687

 Score =  128 bits (322), Expect = 1e-27
 Identities = 62/63 (98%), Positives = 62/63 (98%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>emb|CDY21192.1| BnaA01g34230D [Brassica napus]
          Length = 552

 Score =  127 bits (319), Expect = 3e-27
 Identities = 63/75 (84%), Positives = 65/75 (86%)
 Frame = -2

Query: 229 SDLERGRSYWIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFR 50
           S  E GRSY  G YPNFSFARP+ KKPTFLRLRGSFEYEIQSWKYSIPLFF TQGFD FR
Sbjct: 2   SGFEGGRSY-SGPYPNFSFARPITKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDIFR 60

Query: 49  NREISSGAGAIRVQL 5
           NREIS+GAGAIR QL
Sbjct: 61  NREISTGAGAIREQL 75


>gb|KFK40391.1| hypothetical protein AALP_AA3G367400 [Arabis alpina]
          Length = 552

 Score =  127 bits (319), Expect = 3e-27
 Identities = 63/75 (84%), Positives = 65/75 (86%)
 Frame = -2

Query: 229 SDLERGRSYWIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFR 50
           S  E GRSY  G YPNFSFARP+ KKPTFLRLRGSFEYEIQSWKYSIPLFF TQGFD FR
Sbjct: 2   SGFEGGRSY-SGPYPNFSFARPITKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDIFR 60

Query: 49  NREISSGAGAIRVQL 5
           NREIS+GAGAIR QL
Sbjct: 61  NREISTGAGAIREQL 75


>gb|AIK21453.1| RNA polymerase beta (chloroplast) [Pisum sativum]
          Length = 688

 Score =  127 bits (318), Expect = 4e-27
 Identities = 61/63 (96%), Positives = 62/63 (98%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSF+YEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFKYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>ref|YP_009141793.1| RNA polymerase beta (chloroplast) [Vicia sativa]
           gi|675298701|gb|AIL56318.1| RNA polymerase beta
           (chloroplast) [Vicia sativa]
          Length = 695

 Score =  125 bits (315), Expect = 1e-26
 Identities = 60/63 (95%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPV+KKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFD FRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVIKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDKFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>gb|AIJ28181.1| RNA polymerase beta (chloroplast) [Trifolium occidentale]
          Length = 688

 Score =  125 bits (315), Expect = 1e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIP FFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPPFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>gb|AIJ28041.1| RNA polymerase beta (chloroplast) [Trifolium lupinaster]
          Length = 688

 Score =  125 bits (315), Expect = 1e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIP FFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPPFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>gb|AGW45902.1| RNA polymerase beta [Lens culinaris]
          Length = 687

 Score =  125 bits (315), Expect = 1e-26
 Identities = 59/65 (90%), Positives = 62/65 (95%)
 Frame = -2

Query: 196 GSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAI 17
           G YPNFSFARPVVKKPTFLRLRGSF+YE+QSWKYS+P FFATQGFDTFRNREISSGAGAI
Sbjct: 143 GDYPNFSFARPVVKKPTFLRLRGSFKYEMQSWKYSLPFFFATQGFDTFRNREISSGAGAI 202

Query: 16  RVQLV 2
           R QLV
Sbjct: 203 REQLV 207


>ref|XP_002886863.1| hypothetical protein ARALYDRAFT_893971 [Arabidopsis lyrata subsp.
            lyrata] gi|297332704|gb|EFH63122.1| hypothetical protein
            ARALYDRAFT_893971 [Arabidopsis lyrata subsp. lyrata]
          Length = 1763

 Score =  125 bits (313), Expect = 2e-26
 Identities = 61/70 (87%), Positives = 63/70 (90%)
 Frame = -2

Query: 214  GRSYWIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREIS 35
            GRSY  G YPNFSFARP+ KKPTFLRLRGSFEYEIQSWKYSIPLFF TQGFD FRNREIS
Sbjct: 1218 GRSY-SGPYPNFSFARPITKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDIFRNREIS 1276

Query: 34   SGAGAIRVQL 5
            +GAGAIR QL
Sbjct: 1277 TGAGAIREQL 1286


>ref|YP_009138791.1| RNA polymerase beta (chloroplast) [Lathyrus palustris]
           gi|672919954|gb|AIK21159.1| RNA polymerase beta
           (chloroplast) [Lathyrus palustris]
          Length = 709

 Score =  124 bits (312), Expect = 2e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWK SIPLFFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKDSIPLFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>gb|AIK20829.1| RNA polymerase beta (chloroplast) [Lathyrus japonicus]
          Length = 688

 Score =  124 bits (312), Expect = 2e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWK SIPLFFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKDSIPLFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>ref|YP_009138535.1| RNA polymerase beta (chloroplast) [Lathyrus japonicus]
           gi|672919544|gb|AIK20754.1| RNA polymerase beta
           (chloroplast) [Lathyrus japonicus]
          Length = 702

 Score =  124 bits (312), Expect = 2e-26
 Identities = 61/63 (96%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSFEYEIQSWK SIPLFFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKDSIPLFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>ref|YP_009109856.1| RNA polymerase beta (chloroplast) [Trifolium glanduliferum]
           gi|751425471|ref|YP_009109931.1| RNA polymerase beta
           (chloroplast) [Trifolium strictum]
           gi|672425056|gb|AIJ27896.1| RNA polymerase beta
           (chloroplast) [Trifolium glanduliferum]
           gi|672425565|gb|AIJ28398.1| RNA polymerase beta
           (chloroplast) [Trifolium strictum]
          Length = 688

 Score =  124 bits (312), Expect = 2e-26
 Identities = 60/63 (95%), Positives = 61/63 (96%)
 Frame = -2

Query: 190 YPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAIRV 11
           YPNFSFARPVVKKPTFLRLRGSF+YEIQSWKYSIP FFATQGFDTFRNREISSGAGAIR 
Sbjct: 146 YPNFSFARPVVKKPTFLRLRGSFDYEIQSWKYSIPPFFATQGFDTFRNREISSGAGAIRE 205

Query: 10  QLV 2
           QLV
Sbjct: 206 QLV 208


>gb|AHH80690.1| RNA polymerase beta [Gossypium laxum]
          Length = 690

 Score =  124 bits (310), Expect = 4e-26
 Identities = 59/70 (84%), Positives = 62/70 (88%)
 Frame = -2

Query: 214 GRSYWIGSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREIS 35
           G  Y  G YPNFSFARP+ KKPTFLRLRGSFEYEIQSWKYSIPLFF TQGFDTFR+REIS
Sbjct: 139 GLVYCDGPYPNFSFARPIAKKPTFLRLRGSFEYEIQSWKYSIPLFFTTQGFDTFRSREIS 198

Query: 34  SGAGAIRVQL 5
           +GAGAIR QL
Sbjct: 199 TGAGAIREQL 208


>ref|YP_008963385.1| RNA polymerase beta (chloroplast) [Sedum sarmentosum]
           gi|402797520|gb|AFQ99052.1| RNA polymerase beta
           (chloroplast) [Sedum sarmentosum]
          Length = 552

 Score =  124 bits (310), Expect = 4e-26
 Identities = 58/64 (90%), Positives = 60/64 (93%)
 Frame = -2

Query: 196 GSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAI 17
           GSYPNFSFARP+ KKPTFLRLRG FEYEIQSWKYSIPLFF TQGFDTFRNREIS+GAGAI
Sbjct: 10  GSYPNFSFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAI 69

Query: 16  RVQL 5
           R QL
Sbjct: 70  REQL 73


>ref|YP_009164491.1| RNA polymerase beta (chloroplast) [Sedum oryzifolium]
           gi|744672538|gb|AJD00142.1| RNA polymerase beta
           (chloroplast) [Sedum oryzifolium]
          Length = 697

 Score =  123 bits (308), Expect(2) = 4e-26
 Identities = 58/65 (89%), Positives = 60/65 (92%)
 Frame = -2

Query: 196 GSYPNFSFARPVVKKPTFLRLRGSFEYEIQSWKYSIPLFFATQGFDTFRNREISSGAGAI 17
           GSYPNF FARP+ KKPTFLRLRG FEYEIQSWKYSIPLFF TQGFDTFRNREIS+GAGAI
Sbjct: 155 GSYPNFYFARPIAKKPTFLRLRGLFEYEIQSWKYSIPLFFTTQGFDTFRNREISTGAGAI 214

Query: 16  RVQLV 2
           R QLV
Sbjct: 215 REQLV 219



 Score = 21.6 bits (44), Expect(2) = 4e-26
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = -3

Query: 228 PIWKGGDPIG 199
           PI KGGDP G
Sbjct: 146 PILKGGDPTG 155