BLASTX nr result

ID: Wisteria21_contig00036126 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00036126
         (284 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          59   1e-06
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            49   9e-06

>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 3/54 (5%)
 Frame = +2

Query: 104 DIFLVGEDNYLNVASDECIWIIDSGASFHVTPHEEFFSSYQKGRFW---YGEDG 256
           D+ +  +DN +NVA  E  WI+DSGA++HVTP +EFF+SY  G F     G DG
Sbjct: 270 DLLVACDDNVINVACHETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDG 323


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 48.9 bits (115), Expect(2) = 9e-06
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = +2

Query: 113 LVGEDNYLNVASDECIWIIDSGASFHVTPHEEFFSSYQKGRF 238
           +V +D+ +N+ + E  W+IDSGA+ H TP  E FSSY  G F
Sbjct: 276 VVYDDDIINLTTQEMTWVIDSGATIHATPRRELFSSYTLGDF 317



 Score = 26.9 bits (58), Expect(2) = 9e-06
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = +3

Query: 231 GDFGTVKMGNHVTSKIVG 284
           GDFG VKMGN   S +VG
Sbjct: 315 GDFGRVKMGNANFSTVVG 332


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