BLASTX nr result

ID: Wisteria21_contig00035209 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00035209
         (312 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007027153.1| RNA-binding family protein with retrovirus z...    68   3e-09

>ref|XP_007027153.1| RNA-binding family protein with retrovirus zinc finger-like domain,
           putative [Theobroma cacao] gi|508715758|gb|EOY07655.1|
           RNA-binding family protein with retrovirus zinc
           finger-like domain, putative [Theobroma cacao]
          Length = 312

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 44/103 (42%), Positives = 49/103 (47%)
 Frame = -3

Query: 310 SRTRSLDLERAFSRYGRFLGFWLNPEVCGERVALVELVEIPAEC*LWRFFL*CYCVFLWN 131
           SRTR+ DLE  FSRYGRFLGF L         AL ELVEIPA+C                
Sbjct: 20  SRTRARDLEHIFSRYGRFLGFCLTWRPMVRGSALAELVEIPAQC---------------- 63

Query: 130 WQQSQTGV*FVFEGRSIIQFQ*LSNDGLTICGNHFRRVRDVDM 2
                                 LSNDGLT+  N+FRR+RDVDM
Sbjct: 64  ---------------------YLSNDGLTVSSNNFRRIRDVDM 85


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