BLASTX nr result

ID: Wisteria21_contig00033913 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00033913
         (452 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18929.3| unnamed protein product [Vitis vinifera]               60   8e-07
ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...    60   8e-07
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]    60   8e-07

>emb|CBI18929.3| unnamed protein product [Vitis vinifera]
          Length = 387

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/125 (32%), Positives = 55/125 (44%)
 Frame = -2

Query: 376 SVSMLNAIYNSVSQCLNSTTATLFHARQAHAHFFKFNXXXXXXXXXXXXXLYANXXXXXX 197
           ++++L+++ +++  CLNSTTA+L   RQAHAH  K                YAN      
Sbjct: 7   ALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN-NMCFA 65

Query: 196 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLCAFSQMGHQGLVPDGYLLPSAIKACA 17
                                          H L  FSQM  +GL+PD  +LPSA+KACA
Sbjct: 66  DATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125

Query: 16  ALHAL 2
            L AL
Sbjct: 126 GLSAL 130


>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|731427875|ref|XP_010664142.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230 [Vitis vinifera]
           gi|731427877|ref|XP_010664143.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera] gi|731427879|ref|XP_010664144.1|
           PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230 [Vitis vinifera]
          Length = 758

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/125 (32%), Positives = 55/125 (44%)
 Frame = -2

Query: 376 SVSMLNAIYNSVSQCLNSTTATLFHARQAHAHFFKFNXXXXXXXXXXXXXLYANXXXXXX 197
           ++++L+++ +++  CLNSTTA+L   RQAHAH  K                YAN      
Sbjct: 7   ALALLDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN-NMCFA 65

Query: 196 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLCAFSQMGHQGLVPDGYLLPSAIKACA 17
                                          H L  FSQM  +GL+PD  +LPSA+KACA
Sbjct: 66  DATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125

Query: 16  ALHAL 2
            L AL
Sbjct: 126 GLSAL 130


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 40/125 (32%), Positives = 55/125 (44%)
 Frame = -2

Query: 376 SVSMLNAIYNSVSQCLNSTTATLFHARQAHAHFFKFNXXXXXXXXXXXXXLYANXXXXXX 197
           ++++L+++ +++  CLNSTTA+L   RQAHAH  K                YAN      
Sbjct: 7   ALALLDSVQHTILNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYAN-NMCFA 65

Query: 196 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHVLCAFSQMGHQGLVPDGYLLPSAIKACA 17
                                          H L  FSQM  +GL+PD  +LPSA+KACA
Sbjct: 66  DATLVLDLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACA 125

Query: 16  ALHAL 2
            L AL
Sbjct: 126 GLSAL 130


Top