BLASTX nr result

ID: Wisteria21_contig00032068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00032068
         (339 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006582462.1| PREDICTED: putative ribonuclease H protein A...    95   2e-17
gb|KHN20047.1| Putative ribonuclease H protein, partial [Glycine...    92   1e-16
gb|KHN34212.1| Putative ribonuclease H protein [Glycine soja]          86   1e-14
ref|XP_006587149.1| PREDICTED: putative ribonuclease H protein A...    79   1e-12
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    79   1e-12
gb|ABN08697.1| RNA-directed DNA polymerase ; Ribonuclease H, put...    74   3e-11
gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japo...    71   3e-10
gb|ABA96203.1| retrotransposon protein, putative, unclassified, ...    71   3e-10
ref|XP_013450427.1| reverse transcriptase, putative [Medicago tr...    69   1e-09
gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indi...    68   3e-09
ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein A...    67   5e-09
ref|XP_013624915.1| PREDICTED: uncharacterized protein LOC106331...    67   7e-09
ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein A...    66   9e-09
ref|XP_009130050.1| PREDICTED: putative ribonuclease H protein A...    64   3e-08
ref|XP_004310201.2| PREDICTED: uncharacterized protein LOC101298...    64   6e-08
ref|XP_013751381.1| PREDICTED: uncharacterized mitochondrial pro...    63   8e-08
ref|XP_002456461.1| hypothetical protein SORBIDRAFT_03g036763, p...    63   1e-07
ref|XP_013654094.1| PREDICTED: uncharacterized protein LOC106358...    62   1e-07
gb|KHN21319.1| Putative ribonuclease H protein, partial [Glycine...    62   1e-07
ref|XP_009117147.1| PREDICTED: putative ribonuclease H protein A...    62   1e-07

>ref|XP_006582462.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 779

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 4/114 (3%)
 Frame = -2

Query: 338 MHNLWMPEKICDSLDSCIKQFIWGGKTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGK 159
           MHN W PE ICD +D  ++ FIWG  T HWV W  +    + GGL +R+AR  N+ +LGK
Sbjct: 405 MHNCWRPEGICDQIDQTVRGFIWGSSTSHWVPWETITQSRARGGLGVRKAREANISLLGK 464

Query: 158 LFINLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDGY 9
               +I       ++  +  Y    +   + + +GA++TW+SI+ A D LKDG+
Sbjct: 465 HIWEVIHNPDKLWVKLMTNKYLNHNSIVQSMSPRGATFTWSSILKATDFLKDGF 518


>gb|KHN20047.1| Putative ribonuclease H protein, partial [Glycine soja]
          Length = 220

 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
 Frame = -2

Query: 338 MHNLWMPEKICDSLDSCIKQFIWGGKTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGK 159
           MHN W PE IC  +D  ++ FIWG  T HWV W  +    + GGL +R+AR  N+ +LGK
Sbjct: 59  MHNCWRPEGICHQIDQTVRGFIWGSSTSHWVPWETITQSRARGGLGVRKAREANISLLGK 118

Query: 158 LFINLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDGY 9
               +I       ++  +  Y    +   + + +GA++TW+SI+ A D LKDG+
Sbjct: 119 HIWEVIHNPDKLWVKLMTNKYLNHNSIVQSMSPRGATFTWSSILKATDFLKDGF 172


>gb|KHN34212.1| Putative ribonuclease H protein [Glycine soja]
          Length = 149

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
 Frame = -2

Query: 338 MHNLWMPEKICDSLDSCIKQFIWGGKTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGK 159
           M NL++P+ +CD++D   +QFIWG    HWV+W+ + LP SNGGL +R  R  +V + GK
Sbjct: 1   MQNLFLPQGVCDAIDRISRQFIWGSPPSHWVDWNTISLPRSNGGLGIRPTREASVALHGK 60

Query: 158 LFINLISCGSNYCLRSTSRDYA----FFTTTNYKGASYTWNSIVWAADILKDGYIY 3
              ++I   +   ++     Y      F   +Y G  YTW SI   A IL+ G+ Y
Sbjct: 61  HVWSVIHDPTKLWVQIQKDKYLKGDWIFHHRDYAGCFYTWTSIKKLAMILQPGFSY 116


>ref|XP_006587149.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
           max]
          Length = 223

 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 40/112 (35%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
 Frame = -2

Query: 332 NLWMPEKICDSLDSCIKQFIWGGKTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLF 153
           NLW+P+  C+++D+  ++ IWG  T HWV W  +     NGGL +RRAR  NV +LGK  
Sbjct: 97  NLWIPQGTCNAIDATSRRLIWGNATSHWVKWDTITQSRKNGGLGVRRARDTNVALLGKKV 156

Query: 152 INLI----SCGSNYCLRSTSRDYAFFTTTNYKGASYTWNSIVWAADILKDGY 9
            ++I    S   N       R  +     +Y   SY W SI   + IL  G+
Sbjct: 157 WSMIHDHHSLRVNLLESKYLRHDSVLRQKDYTNCSYIWASIKKVSSILSSGF 208


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 41/113 (36%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
 Frame = -2

Query: 326  WMPEKICDSLDSCIKQFIWGG---KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
            W+P+ ICDS+D   + F+W G   K  H VNW  +  P S GGL +R AR  N+ +LGKL
Sbjct: 811  WLPQNICDSIDQTARNFLWKGSNNKGIHLVNWKTITRPKSIGGLGIRSARDANICLLGKL 870

Query: 155  FINLISCGSNYCLRSTSRDYAFFTT----TNYKGASYTWNSIVWAADILKDGY 9
              +++   +   +   ++ Y+  T+         +S +W SI+ A DILK GY
Sbjct: 871  VWDMVQSTNKLWVNLLAKKYSSGTSLLEANVNSNSSPSWFSIIRAKDILKTGY 923


>gb|ABN08697.1| RNA-directed DNA polymerase ; Ribonuclease H, putative [Medicago
           truncatula]
          Length = 291

 Score = 74.3 bits (181), Expect = 3e-11
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
 Frame = -2

Query: 326 WMPEKICDSLDSCIKQFIWGG---KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
           W+P+ ICDS+D   + F+W G   K  H VNW KV  P   GGL ++ AR  N  +LGKL
Sbjct: 100 WLPQNICDSIDHTTRNFVWKGTDNKGIHLVNWQKVTKPKHMGGLGIQSARDANTCLLGKL 159

Query: 155 FINLISCGSNYCLRSTSRDYAFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
            I       +    S+S              S +W+SI+ A DIL++GY++
Sbjct: 160 QIRFWPNTLHATYNSSS--------------SPSWSSIIKAKDILRNGYVW 196


>gb|EEE52627.1| hypothetical protein OsJ_34967 [Oryza sativa Japonica Group]
          Length = 1395

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG----KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
           +P KIC  +   I Q+ WG     +  HW  W K+C+P   GG+  R  +  N+ +L K 
Sbjct: 304 IPNKICKGITDAISQYWWGDDADHRRIHWQEWWKMCMPKGKGGMGFRDLQSFNLALLAKQ 363

Query: 155 FINLISCGSNYCLRSTS----RDYAFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
              L+S   + C R       RD          G+SYTW SI+      K GYI+
Sbjct: 364 VWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQGYIW 418


>gb|ABA96203.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group]
          Length = 1378

 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 37/115 (32%), Positives = 52/115 (45%), Gaps = 8/115 (6%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG----KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
           +P KIC  +   I Q+ WG     +  HW  W K+C+P   GG+  R  +  N+ +L K 
Sbjct: 274 IPNKICKGITDAISQYWWGDDADHRRIHWQEWWKMCMPKGKGGMGFRDLQSFNLALLAKQ 333

Query: 155 FINLISCGSNYCLRSTS----RDYAFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
              L+S   + C R       RD          G+SYTW SI+      K GYI+
Sbjct: 334 VWRLLSDPDSLCARVLRARYYRDGKLLNARMKSGSSYTWQSILAGLQCFKQGYIW 388


>ref|XP_013450427.1| reverse transcriptase, putative [Medicago truncatula]
           gi|657380239|gb|KEH24455.1| reverse transcriptase,
           putative [Medicago truncatula]
          Length = 336

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 3/111 (2%)
 Frame = -2

Query: 326 WMPEKICDSLDSCIKQFIWGG---KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
           W+P+ ICDS+D   + F+W G   K  H VNW KV  P   GGL ++ AR  N   +GK 
Sbjct: 143 WLPQNICDSIDHTTRNFVWKGTDNKGIHLVNWQKVTKPKHMGGLGIQSARDANT-SVGKH 201

Query: 155 FINLISCGSNYCLRSTSRDYAFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
            I  I    N               T    +S +W+SI+ A DIL++GY++
Sbjct: 202 SIQQIRFWPN-----------TLHATYNSSSSPSWSSIIKAKDILRNGYVW 241


>gb|EEC68711.1| hypothetical protein OsI_37193 [Oryza sativa Indica Group]
          Length = 1546

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 36/115 (31%), Positives = 50/115 (43%), Gaps = 8/115 (6%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG----KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
           +P KIC  +   I Q+ WG     +  HW  W K+C+P   GG+  R  +  N+ +L K 
Sbjct: 455 IPNKICKGITDAISQYWWGDDADHRRIHWQEWWKMCMPKGKGGMGFRDLQSFNLALLAKQ 514

Query: 155 FINLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
              L S   + C R     Y             G+SYTW SI+      K GYI+
Sbjct: 515 VWRLQSDPDSLCARVLRARYYLDGKLLNARMKSGSSYTWQSILAGLQCFKQGYIW 569


>ref|XP_009108245.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 459

 Score = 67.0 bits (162), Expect = 5e-09
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG---KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLF 153
           +P  ICD ++S + +F WG    K  HW +W +V +P   GGL  R     N  +LGK  
Sbjct: 76  LPRNICDEINSILAKFWWGSGVKKGMHWYSWKRVSVPKREGGLGFRDLEKFNQALLGKQV 135

Query: 152 INLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDG 12
             +I        R     Y      FT T  + +SY W S+++  D+LK G
Sbjct: 136 WRIIQNPQCLMARIIKARYFPDGNTFTATIKRKSSYAWKSLIYGRDLLKRG 186


>ref|XP_013624915.1| PREDICTED: uncharacterized protein LOC106331124 [Brassica oleracea
           var. oleracea]
          Length = 771

 Score = 66.6 bits (161), Expect = 7e-09
 Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 8/112 (7%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGGKT----CHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKL 156
           +P +IC+ L + +  F WG +      HWV W K+C+P+  GGL  R  R  N+ +L K 
Sbjct: 234 LPIEICNKLSATVACFWWGTRNNNRGLHWVAWDKICVPLEEGGLGFRNFRDFNLALLAKQ 293

Query: 155 FINLISCGSNYCLRSTSRDYAF----FTTTNYKGASYTWNSIVWAADILKDG 12
              L++  ++   R     Y       TT      S+ WNS++ A  +L+DG
Sbjct: 294 VWRLLTRPNSLLARVLKGRYYRHSNPLTTAKANNPSFGWNSLMAAKHVLQDG 345


>ref|XP_009114067.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 524

 Score = 66.2 bits (160), Expect = 9e-09
 Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 7/111 (6%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG--KT-CHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLF 153
           +P  ICD ++S + +F WG   KT  HW +W +V +P   GGL  R     N  +LGK  
Sbjct: 76  LPRNICDEINSILAKFWWGSGDKTGMHWYSWKRVSVPKREGGLGFRDLEKFNQALLGKQV 135

Query: 152 INLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDG 12
             +I        R     Y      FT T  + +SY W S+++  D+LK G
Sbjct: 136 WRIIQNPQCLMARIIKARYFPDGNIFTATIKRKSSYAWKSLIYGRDLLKRG 186


>ref|XP_009130050.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 1128

 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 9/116 (7%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG---KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLF 153
           +P+++CD ++  + +F WG    K  HW +W +V LP S GGL  R     N  +LGK  
Sbjct: 569 LPKEVCDEINRVLARFWWGSGENKGMHWYDWKRVSLPKSEGGLGFRDLEKFNQALLGKQV 628

Query: 152 INLISCGSNYCLRSTSRDYAFFTTTNYKG------ASYTWNSIVWAADILKDGYIY 3
             ++   +  CL +      +F   +         ASY W SI++  D++K G  Y
Sbjct: 629 WRILQ--NPGCLMARILKARYFLDGDILSAELKTKASYAWKSILYGRDLVKQGMRY 682


>ref|XP_004310201.2| PREDICTED: uncharacterized protein LOC101298860 [Fragaria vesca
            subsp. vesca]
          Length = 1303

 Score = 63.5 bits (153), Expect = 6e-08
 Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 8/111 (7%)
 Frame = -2

Query: 311  ICDSLDSCIKQFIWG----GKTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLFINL 144
            IC+ +  C+ +F WG    G+  HWV W K+C P + GGL  R     N  +L K    +
Sbjct: 774  ICNEMHRCMAEFWWGDSDRGRKIHWVAWDKMCAPKNEGGLGFRNMELFNQALLAKKGWRI 833

Query: 143  ISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
            I+   +   R+    Y     F        ASY W S++   D+L+ G  Y
Sbjct: 834  INSLDSLVTRTLKAKYFPSGHFLKAEMGSDASYVWRSLLKGRDLLRKGIRY 884


>ref|XP_013751381.1| PREDICTED: uncharacterized mitochondrial protein AtMg00310-like
           [Brassica napus]
          Length = 272

 Score = 63.2 bits (152), Expect = 8e-08
 Identities = 36/117 (30%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
 Frame = -2

Query: 338 MHNLWMPEKICDSLDSCIKQFIWGG----KTCHWVNWSKVCLPMSNGGLSLRRARPINVF 171
           M    +P +IC++L S I QF W      +  HW  W KVCLP   GG+  R     N+ 
Sbjct: 1   MSTFLLPLEICENLASAIAQFWWSSNPPKRGIHWAKWEKVCLPKKEGGIGFRLIHEFNLA 60

Query: 170 MLGKLFINLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDG 12
           +L K    L+    +   R     Y    +  + T+    SY W SI+ A  +L  G
Sbjct: 61  LLAKQLWRLVQYPDSLVARVLRGRYYRLSSPLSATSTSSPSYVWTSIIAARKLLLRG 117


>ref|XP_002456461.1| hypothetical protein SORBIDRAFT_03g036763, partial [Sorghum
           bicolor] gi|241928436|gb|EES01581.1| hypothetical
           protein SORBIDRAFT_03g036763, partial [Sorghum bicolor]
          Length = 218

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 34/103 (33%), Positives = 46/103 (44%), Gaps = 8/103 (7%)
 Frame = -2

Query: 287 IKQFIWGG----KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLFINLISCGSNYC 120
           I QF WG     K  HW  W K+C P S+GG+  R     N+ ML K    L+    + C
Sbjct: 5   ISQFWWGDEDGKKRIHWQEWWKLCFPKSSGGMGFRDFHSFNLAMLAKQVCRLLCDPESLC 64

Query: 119 LRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDGYIY 3
            R     Y          +  G+SYTW S++   +  K GYI+
Sbjct: 65  ARVFRAKYYPDGKLLEARSKSGSSYTWQSVLAGLECFKRGYIW 107


>ref|XP_013654094.1| PREDICTED: uncharacterized protein LOC106358844 [Brassica napus]
          Length = 1129

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 35/114 (30%), Positives = 50/114 (43%), Gaps = 8/114 (7%)
 Frame = -2

Query: 338 MHNLWMPEKICDSLDSCIKQFIWGG----KTCHWVNWSKVCLPMSNGGLSLRRARPINVF 171
           M    +P +IC++L S I QF W      +  HW  W KVCLP   GG+  R     N+ 
Sbjct: 526 MSTFLLPLEICENLASAIAQFWWSSNPPKRGIHWAKWEKVCLPKEEGGIGFRLIHEFNLA 585

Query: 170 MLGKLFINLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADIL 21
           +L K    L+    +   R     Y    +  + T+    SY W SI+ A  +L
Sbjct: 586 LLAKQLWRLVQYPDSLVARVLRGRYYRLSSPLSATSTSSPSYVWTSIISARKLL 639


>gb|KHN21319.1| Putative ribonuclease H protein, partial [Glycine soja]
          Length = 161

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 24/54 (44%), Positives = 31/54 (57%)
 Frame = -2

Query: 338 MHNLWMPEKICDSLDSCIKQFIWGGKTCHWVNWSKVCLPMSNGGLSLRRARPIN 177
           M NLW+P  +CD +D     FIWG    HWV W  +  P + GGLS+R  R +N
Sbjct: 108 MQNLWLPTGVCDEIDRVTHTFIWGYTKNHWVKWDVIIRPRNRGGLSIRTTREVN 161


>ref|XP_009117147.1| PREDICTED: putative ribonuclease H protein At1g65750 [Brassica
           rapa]
          Length = 316

 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
 Frame = -2

Query: 323 MPEKICDSLDSCIKQFIWGG---KTCHWVNWSKVCLPMSNGGLSLRRARPINVFMLGKLF 153
           +P+ IC+ +++ +  F WG    K  HW +W ++C+P   GGL  R     N  +L K  
Sbjct: 76  LPKTICEEINTLLANFWWGSGSNKGMHWYSWERICVPKKEGGLGFRDLERFNQALLSKRV 135

Query: 152 INLISCGSNYCLRSTSRDY----AFFTTTNYKGASYTWNSIVWAADILKDG 12
             L+        R     Y    +  T  + + ASY W S+++  D+L  G
Sbjct: 136 WRLLQQPECLAARILKARYYPEESILTVQSKRKASYVWKSLLYGRDLLIQG 186


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