BLASTX nr result
ID: Wisteria21_contig00028415
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Wisteria21_contig00028415
(1479 letters)
Database: ./nr
77,306,371 sequences; 28,104,191,420 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_009161318.1| RpoA (chloroplast) [Wisteria floribunda] gi|... 583 e-163
ref|YP_009141641.1| RNA polymerase alpha subunit (chloroplast) [... 540 e-150
ref|YP_009109918.1| RNA polymerase alpha subunit (chloroplast) [... 539 e-150
gb|AJE72745.1| RNA polymerase alpha subunit (plastid) [Astragalu... 539 e-150
ref|YP_001381697.1| RNA polymerase alpha subunit [Medicago trunc... 538 e-150
gb|AIJ28178.1| RNA polymerase alpha subunit (chloroplast) [Trifo... 538 e-150
ref|YP_009175791.1| RNA polymerase alpha subunit (chloroplast) [... 537 e-150
gb|AJE72177.1| RNA polymerase alpha subunit (plastid) [Trifolium... 537 e-149
gb|AIJ28052.1| RNA polymerase alpha subunit (chloroplast) [Trifo... 537 e-149
ref|YP_009027106.1| RNA polymerase alpha subunit [Trifolium aure... 537 e-149
ref|YP_009027031.1| RNA polymerase alpha subunit [Trifolium gran... 537 e-149
gb|AJE71609.1| RNA polymerase alpha subunit (plastid) [Melilotus... 536 e-149
ref|YP_009109843.1| RNA polymerase alpha subunit (chloroplast) [... 536 e-149
gb|AJE72106.1| RNA polymerase alpha subunit (plastid) [Trifolium... 535 e-149
ref|YP_009109771.1| RNA polymerase alpha subunit (chloroplast) [... 535 e-149
ref|YP_009027180.1| RNA polymerase alpha subunit [Trifolium repe... 534 e-149
gb|AJE71751.1| RNA polymerase alpha subunit (plastid) [Astragalu... 533 e-148
gb|AGS44005.1| RNA polymerase alpha subunit [Vicia faba] 533 e-148
gb|AJE72248.1| RNA polymerase alpha subunit (plastid) [Oxytropis... 533 e-148
ref|XP_003606056.2| DNA-directed RNA polymerase subunit alpha [M... 533 e-148
>ref|YP_009161318.1| RpoA (chloroplast) [Wisteria floribunda] gi|743433744|gb|AJC10067.1|
RpoA (chloroplast) [Wisteria floribunda]
Length = 333
Score = 583 bits (1503), Expect = e-163
Identities = 291/291 (100%), Positives = 291/291 (100%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT
Sbjct: 1 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK
Sbjct: 241 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 291
>ref|YP_009141641.1| RNA polymerase alpha subunit (chloroplast) [Medicago hybrida]
gi|827045378|ref|YP_009141716.1| RNA polymerase alpha
subunit (chloroplast) [Medicago papillosa]
gi|675298547|gb|AIL56166.1| RNA polymerase alpha subunit
(chloroplast) [Medicago hybrida]
gi|675298623|gb|AIL56241.1| RNA polymerase alpha subunit
(chloroplast) [Medicago papillosa]
Length = 333
Score = 540 bits (1391), Expect = e-150
Identities = 268/291 (92%), Positives = 277/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVSTR LQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ L SIFIDQL SPR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLLKDKLRKNKKEIALKSIFIDQLELSPRIYNCLKK 291
>ref|YP_009109918.1| RNA polymerase alpha subunit (chloroplast) [Trifolium strictum]
gi|672425552|gb|AIJ28385.1| RNA polymerase alpha subunit
(chloroplast) [Trifolium strictum]
Length = 333
Score = 539 bits (1389), Expect = e-150
Identities = 268/291 (92%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVSTR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL + K+E+ L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKTKKEIGLKSIFIDQLELPPRIYNCLKK 291
>gb|AJE72745.1| RNA polymerase alpha subunit (plastid) [Astragalus crassicarpus]
Length = 333
Score = 539 bits (1388), Expect = e-150
Identities = 267/291 (91%), Positives = 278/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+ EKVKVSTR LQWKCVESRVDSK LYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIGEKVKVSTRTLQWKCVESRVDSKHLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICF+GPG++TAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFQGPGYLTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVD+TQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDDTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN NLE
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ LNSIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKKEIPLNSIFIDQLELPPRIYNCLKK 291
>ref|YP_001381697.1| RNA polymerase alpha subunit [Medicago truncatula]
gi|404332311|gb|AFR59943.1| RNA polymerase alpha subunit
[Medicago truncatula] gi|404332388|gb|AFR60019.1| RNA
polymerase alpha subunit [Medicago truncatula]
gi|404332465|gb|AFR60095.1| RNA polymerase alpha subunit
[Medicago truncatula]
Length = 333
Score = 538 bits (1386), Expect = e-150
Identities = 267/291 (91%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVS R LQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ L SIFIDQL SPR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLLKDKLRKNKKEIALKSIFIDQLELSPRIYNCLKK 291
>gb|AIJ28178.1| RNA polymerase alpha subunit (chloroplast) [Trifolium occidentale]
Length = 333
Score = 538 bits (1385), Expect = e-150
Identities = 266/291 (91%), Positives = 277/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVSTR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKT++NIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQE+LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEMLFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKKEIGLKSIFIDQLELPPRIYNCLKK 291
>ref|YP_009175791.1| RNA polymerase alpha subunit (chloroplast) [Astragalus nakaianus]
gi|937180911|gb|ALH42762.1| RNA polymerase alpha subunit
(chloroplast) [Astragalus nakaianus]
Length = 333
Score = 537 bits (1384), Expect = e-150
Identities = 267/291 (91%), Positives = 277/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+ EKVKVST LQWKCVESRVDSK LYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIGEKVKVSTGTLQWKCVESRVDSKHLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICF+GPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFQGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVD+TQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDDTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN NLE
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ LNSIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKKEIPLNSIFIDQLELPPRIYNCLKK 291
>gb|AJE72177.1| RNA polymerase alpha subunit (plastid) [Trifolium campestre]
Length = 335
Score = 537 bits (1383), Expect = e-149
Identities = 266/291 (91%), Positives = 277/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVST+ LQWKCVESRVDSKRLYYGRFI+SPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFIMSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTR+ASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTREASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +N +E++L SIFIDQL PRVYNCLKK
Sbjct: 241 NNQHKVTLPLFTFYDRLVKDKLRKNTKEIRLKSIFIDQLELPPRVYNCLKK 291
>gb|AIJ28052.1| RNA polymerase alpha subunit (chloroplast) [Trifolium lupinaster]
Length = 333
Score = 537 bits (1383), Expect = e-149
Identities = 267/291 (91%), Positives = 275/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVSTR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTL N QDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERERGYRIKTLENSQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKKEIGLKSIFIDQLELPPRIYNCLKK 291
>ref|YP_009027106.1| RNA polymerase alpha subunit [Trifolium aureum]
gi|514994783|gb|AGO63760.1| RNA polymerase alpha subunit
[Trifolium aureum]
Length = 335
Score = 537 bits (1383), Expect = e-149
Identities = 265/291 (91%), Positives = 277/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVST+ LQWKCVESRVDSKRLYYGRFI+SPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFIMSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTR+ASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTREASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGY IKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYHIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E++L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFYDRLVKDKLRKNKKEIRLKSIFIDQLELPPRIYNCLKK 291
>ref|YP_009027031.1| RNA polymerase alpha subunit [Trifolium grandiflorum]
gi|514994707|gb|AGO63685.1| RNA polymerase alpha subunit
[Trifolium grandiflorum]
Length = 335
Score = 537 bits (1383), Expect = e-149
Identities = 266/291 (91%), Positives = 277/291 (95%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVST+ LQWKCVESRVDSKRLYYGRFI+SPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFIISPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTR+ASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTREASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +N +E++L SIFIDQL PRVYNCLKK
Sbjct: 241 NNQHKVTLPLFTFYDRLVKDKLRKNTKEIRLKSIFIDQLELPPRVYNCLKK 291
>gb|AJE71609.1| RNA polymerase alpha subunit (plastid) [Melilotus officinalis]
gi|748991241|gb|AJE71680.1| RNA polymerase alpha subunit
(plastid) [Melilotus albus]
Length = 333
Score = 536 bits (1381), Expect = e-149
Identities = 266/291 (91%), Positives = 275/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVSTR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEI+DNTQHIANLTEPIN IELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIIDNTQHIANLTEPINFSIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+E+ L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKNKKEIALKSIFIDQLELPPRIYNCLKK 291
>ref|YP_009109843.1| RNA polymerase alpha subunit (chloroplast) [Trifolium glanduliferum]
gi|672425043|gb|AIJ27883.1| RNA polymerase alpha subunit
(chloroplast) [Trifolium glanduliferum]
Length = 333
Score = 536 bits (1380), Expect = e-149
Identities = 265/291 (91%), Positives = 275/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REK+KVSTR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKIKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAK EKIPHEYSTIVGIQESIHEILMNLKEIVLRSN+YGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKFEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNMYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL + K+E+ L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKTKKEIGLKSIFIDQLELPPRIYNCLKK 291
>gb|AJE72106.1| RNA polymerase alpha subunit (plastid) [Trifolium pratense]
Length = 333
Score = 535 bits (1378), Expect = e-149
Identities = 265/291 (91%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVST+ LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKT++NIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL + K+E+ L SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKKKKEIGLKSIFIDQLELPPRIYNCLKK 291
>ref|YP_009109771.1| RNA polymerase alpha subunit (chloroplast) [Trifolium boissieri]
gi|672424970|gb|AIJ27811.1| RNA polymerase alpha subunit
(chloroplast) [Trifolium boissieri]
Length = 335
Score = 535 bits (1377), Expect = e-149
Identities = 265/291 (91%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVST+ LQWKCVESRVDSKRLYYGRFI+SPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTQTLQWKCVESRVDSKRLYYGRFIMSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTR+ASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTREASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNG EKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGTEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +N +E++L SIFIDQL PRVYNCLKK
Sbjct: 241 NNQHKVTLPLFTFYDRLVKDKLRKNTKEIRLKSIFIDQLELPPRVYNCLKK 291
>ref|YP_009027180.1| RNA polymerase alpha subunit [Trifolium repens]
gi|514994628|gb|AGO63607.1| RNA polymerase alpha subunit
[Trifolium repens] gi|748992177|gb|AJE72603.1| RNA
polymerase alpha subunit (plastid) [Trifolium repens]
Length = 333
Score = 534 bits (1376), Expect = e-149
Identities = 264/291 (90%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REKVKVSTR LQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKT++NIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTIDNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQE+LFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEMLFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENFNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL ++K+E+ SIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDKLRKSKKEIGFQSIFIDQLELPPRIYNCLKK 291
>gb|AJE71751.1| RNA polymerase alpha subunit (plastid) [Astragalus canadensis]
Length = 335
Score = 533 bits (1374), Expect = e-148
Identities = 265/291 (91%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+ EKVKVSTR LQWKCVESRVDSK LYYGRFILSPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIGEKVKVSTRTLQWKCVESRVDSKHLYYGRFILSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICF+GPG+VTA+D
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFQGPGYVTAKD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVD+TQHIANLTE INLCIELQIERNRGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDDTQHIANLTESINLCIELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN NLE
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNLE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQH TLPLFT DRL KDKL +NK+E+ LNSIFIDQL PR+YNCLKK
Sbjct: 241 NNQHNVTLPLFTFHDRLVKDKLRKNKKEIPLNSIFIDQLELPPRIYNCLKK 291
>gb|AGS44005.1| RNA polymerase alpha subunit [Vicia faba]
Length = 334
Score = 533 bits (1374), Expect = e-148
Identities = 260/291 (89%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+REK+KVST+ LQWKCVESRVDSKRLYYGRFI+SPLMKGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIREKLKVSTQTLQWKCVESRVDSKRLYYGRFIMSPLMKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTI+GIQESIHEILMNLKE+VLRSNLYGTRDASICFKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIIGIQESIHEILMNLKEVVLRSNLYGTRDASICFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVE++DNTQHIANLTEPINLCIEL+I+R RGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEVIDNTQHIANLTEPINLCIELEIDRKRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEIL LEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N E
Sbjct: 181 NANHSIHSYVNGNEKQEILVLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KDKL +NK+EMKL S FIDQL PR+YNCLKK
Sbjct: 241 NNQHKITLPLFTFHDRLVKDKLRKNKKEMKLKSTFIDQLELPPRIYNCLKK 291
>gb|AJE72248.1| RNA polymerase alpha subunit (plastid) [Oxytropis lambertii]
Length = 333
Score = 533 bits (1373), Expect = e-148
Identities = 266/291 (91%), Positives = 276/291 (94%)
Frame = +2
Query: 605 MVREKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGT 784
M+ E+VKVSTR LQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRR+LLGEIEGT
Sbjct: 1 MIGEQVKVSTRTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGT 60
Query: 785 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQD 964
CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASI FKGPG+VTAQD
Sbjct: 61 CITRAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASIFFKGPGYVTAQD 120
Query: 965 IILPPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVR 1144
IILPPSVEIVD+TQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTID+VFMPVR
Sbjct: 121 IILPPSVEIVDDTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDAVFMPVR 180
Query: 1145 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLE 1324
NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN NLE
Sbjct: 181 NANHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENFNLE 240
Query: 1325 NNQHKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
NNQHK TLPLFT DRL KD L +NK+E+ LNSIFIDQL PR+YNCLKK
Sbjct: 241 NNQHKVTLPLFTFHDRLVKDTLRKNKKEIPLNSIFIDQLELPPRIYNCLKK 291
>ref|XP_003606056.2| DNA-directed RNA polymerase subunit alpha [Medicago truncatula]
gi|657387675|gb|AES88253.2| DNA-directed RNA polymerase
subunit alpha [Medicago truncatula]
Length = 442
Score = 533 bits (1373), Expect = e-148
Identities = 265/288 (92%), Positives = 273/288 (94%)
Frame = +2
Query: 614 EKVKVSTRKLQWKCVESRVDSKRLYYGRFILSPLMKGQADTIGIAMRRMLLGEIEGTCIT 793
EKVKVS R LQWKCVESRVDSKRLYYGRFILSPL KGQADTIGIAMRR+LLGEIEGTCIT
Sbjct: 113 EKVKVSARTLQWKCVESRVDSKRLYYGRFILSPLRKGQADTIGIAMRRILLGEIEGTCIT 172
Query: 794 RAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLRSNLYGTRDASICFKGPGHVTAQDIIL 973
RAKSEKIPHEYSTIVGIQESIHEILMNLKEIVL+SNLYGTRDASICFKGPG+VTAQDIIL
Sbjct: 173 RAKSEKIPHEYSTIVGIQESIHEILMNLKEIVLKSNLYGTRDASICFKGPGYVTAQDIIL 232
Query: 974 PPSVEIVDNTQHIANLTEPINLCIELQIERNRGYRIKTLNNIQDGSYTIDSVFMPVRNAN 1153
PPSVEIVDNTQHIANLTEPINLCIELQIER RGYRIKTLNNIQDGSYTID+VFMPVRNAN
Sbjct: 233 PPSVEIVDNTQHIANLTEPINLCIELQIERKRGYRIKTLNNIQDGSYTIDAVFMPVRNAN 292
Query: 1154 HSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENSNLENNQ 1333
HSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEEN N ENNQ
Sbjct: 293 HSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEENLNFENNQ 352
Query: 1334 HKGTLPLFTIQDRLAKDKLSENKQEMKLNSIFIDQLPFSPRVYNCLKK 1477
HK TLPLFT DRL KDKL +NK+E+ L SIFIDQL SPR+YNCLKK
Sbjct: 353 HKVTLPLFTFHDRLLKDKLRKNKKEIALKSIFIDQLELSPRIYNCLKK 400
Score = 204 bits (519), Expect = 2e-49
Identities = 102/112 (91%), Positives = 105/112 (93%)
Frame = +3
Query: 96 MAKPTPKIGSRKNRRIGSRKHPRKIPKGIIYVQASFNNTIVTVTDVRGRVISWSSAGACG 275
MAK PKIGSRKN RIGSRKHPRKIPKG+IYVQASFNNTIVTVTDVRGRVISWSSAG+CG
Sbjct: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
Query: 276 FKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVLIKGPGLGRDAALRAIRRS 431
FKGTRRGTPFAAQTAA NAIRTV DQGMQRA V+IKGPGLGRDAALRAI RS
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARS 112