BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00026222
         (1783 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC ...   565   e-158
gb|KRH04863.1| hypothetical protein GLYMA_17G192200 [Glycine max]     561   e-157
ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC ...   543   e-151
gb|KOM48614.1| hypothetical protein LR48_Vigan07g231800 [Vigna a...   535   e-149
ref|XP_014504966.1| PREDICTED: RNA polymerase sigma factor sigC ...   532   e-148
ref|XP_003588449.1| RNA polymerase sigma factor [Medicago trunca...   525   e-146
ref|XP_007161319.1| hypothetical protein PHAVU_001G059800g [Phas...   499   e-138
ref|XP_007161320.1| hypothetical protein PHAVU_001G059800g [Phas...   488   e-135
ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC ...   473   e-130
gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]      473   e-130
ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [...   462   e-127
ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [The...   460   e-126
gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arbor...   453   e-124
gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium r...   448   e-123
ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-...   448   e-123
ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-...   448   e-123
ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC ...   445   e-122
ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC ...   444   e-121
emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]   444   e-121
ref|XP_011019551.1| PREDICTED: RNA polymerase sigma factor sigC ...   444   e-121

>ref|XP_003551127.1| PREDICTED: RNA polymerase sigma factor sigC isoform X1 [Glycine max]
            gi|947055409|gb|KRH04862.1| hypothetical protein
            GLYMA_17G192200 [Glycine max]
          Length = 551

 Score =  565 bits (1455), Expect = e-158
 Identities = 301/432 (69%), Positives = 345/432 (79%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLMENL  L ETF DSEAL+L   I+LQL KLGALELFN CLSRSL  S + ++ D    
Sbjct: 133  LLMENLCVLEETFVDSEALRLEKAIILQLGKLGALELFNVCLSRSLGTSLVSNYAD---- 188

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
                     KVD+Y DKV VQ                +T V  QS  LKA+QE+LL F  
Sbjct: 189  ---------KVDDYKDKVVVQSSKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSA 239

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            S VK A    N R  VA+REAEMSKGVKVLAELEKIR AIEE TK+VASLS+WAEASGVD
Sbjct: 240  SLVKRAPNTKNKRILVAKREAEMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVD 299

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVLQ+ LH G YCQDELIRSTRSLVLY+ARKYRGMGIAL+DLLQAGYVGVL+GAERFD 
Sbjct: 300  EKVLQKLLHRGYYCQDELIRSTRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDS 359

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTYVQYWIRKSI R+VARYARGIVIPWSL+RA+NQIQKARK++KST  K PDDY
Sbjct: 360  TRGYKFSTYVQYWIRKSILRVVARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDY 419

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSLDKI+SASNCL++VAS  QK+GD L V Y+E +PD +I SPE+AVMKQHMR
Sbjct: 420  EIAKMTGLSLDKIKSASNCLRIVASIDQKVGDYLGVEYMELLPDATIESPEDAVMKQHMR 479

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++DLLKGL+ RER+ILTLRFGL D+QPR+L+DIG  FKVSKE +R+IEKKALTKL+N+
Sbjct: 480  KDVHDLLKGLNLRERKILTLRFGLNDNQPRSLQDIGTLFKVSKERIRKIEKKALTKLKNE 539

Query: 521  ATISNLDFYLDL 486
            ATIS L +YLDL
Sbjct: 540  ATISKLHYYLDL 551


>gb|KRH04863.1| hypothetical protein GLYMA_17G192200 [Glycine max]
          Length = 417

 Score =  561 bits (1447), Expect = e-157
 Identities = 299/430 (69%), Positives = 343/430 (79%)
 Frame = -3

Query: 1775 MENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPDQV 1596
            MENL  L ETF DSEAL+L   I+LQL KLGALELFN CLSRSL  S + ++ D      
Sbjct: 1    MENLCVLEETFVDSEALRLEKAIILQLGKLGALELFNVCLSRSLGTSLVSNYAD------ 54

Query: 1595 REHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLPSS 1416
                   KVD+Y DKV VQ                +T V  QS  LKA+QE+LL F  S 
Sbjct: 55   -------KVDDYKDKVVVQSSKKKENKTRRKREFVSTAVSSQSLTLKANQEDLLGFSASL 107

Query: 1415 VKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVDEK 1236
            VK A    N R  VA+REAEMSKGVKVLAELEKIR AIEE TK+VASLS+WAEASGVDEK
Sbjct: 108  VKRAPNTKNKRILVAKREAEMSKGVKVLAELEKIRTAIEEDTKRVASLSTWAEASGVDEK 167

Query: 1235 VLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDCTR 1056
            VLQ+ LH G YCQDELIRSTRSLVLY+ARKYRGMGIAL+DLLQAGYVGVL+GAERFD TR
Sbjct: 168  VLQKLLHRGYYCQDELIRSTRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDSTR 227

Query: 1055 GYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDYEI 876
            GY+FSTYVQYWIRKSI R+VARYARGIVIPWSL+RA+NQIQKARK++KST  K PDDYEI
Sbjct: 228  GYKFSTYVQYWIRKSILRVVARYARGIVIPWSLNRAINQIQKARKAMKSTHKKCPDDYEI 287

Query: 875  AKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMRRD 696
            AK+TGLSLDKI+SASNCL++VAS  QK+GD L V Y+E +PD +I SPE+AVMKQHMR+D
Sbjct: 288  AKMTGLSLDKIKSASNCLRIVASIDQKVGDYLGVEYMELLPDATIESPEDAVMKQHMRKD 347

Query: 695  LYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNKAT 516
            ++DLLKGL+ RER+ILTLRFGL D+QPR+L+DIG  FKVSKE +R+IEKKALTKL+N+AT
Sbjct: 348  VHDLLKGLNLRERKILTLRFGLNDNQPRSLQDIGTLFKVSKERIRKIEKKALTKLKNEAT 407

Query: 515  ISNLDFYLDL 486
            IS L +YLDL
Sbjct: 408  ISKLHYYLDL 417


>ref|XP_004498453.1| PREDICTED: RNA polymerase sigma factor sigC [Cicer arietinum]
          Length = 545

 Score =  543 bits (1400), Expect = e-151
 Identities = 282/432 (65%), Positives = 337/432 (78%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLMENLG L ETFADSEA++L  DI+L+L KLGALELFN CL+RS   S   + TD + +
Sbjct: 115  LLMENLGILEETFADSEAMRLEKDIVLKLEKLGALELFNVCLTRSFGTSTESNCTDVVLE 174

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
             V+E K N KVD Y  KV VQ                 T      P    +QE  L    
Sbjct: 175  HVKEKKRNFKVDNYTGKVVVQSKRKENRTRRKQASVAITTSFQSLPLEDNNQEGPLRLPA 234

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            S VK  S  +N RA +A+RE EMSKGVKVLAELEK++ AIEE TKQ  SLSSWAEASGVD
Sbjct: 235  SLVKRVSNTNNRRAVIAQREVEMSKGVKVLAELEKMKTAIEEDTKQAVSLSSWAEASGVD 294

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            E VLQ+ L+HG YC+DELIRSTRSLVLY ARKYRGMGIALEDLLQ GY+GVL+GAERFD 
Sbjct: 295  ENVLQRQLYHGYYCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAERFDS 354

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGYRFSTYVQYWIRKS+SRMVARYARGI IPWS+++A++QIQKARK LKSTS K+PDD+
Sbjct: 355  TRGYRFSTYVQYWIRKSMSRMVARYARGITIPWSMNKAISQIQKARKLLKSTSMKYPDDH 414

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSLD+IRSAS+C+++V+S +QK+GD   + Y+ +M D SI SPEE VMKQH+R
Sbjct: 415  EIAKMTGLSLDRIRSASHCMRIVSSMNQKMGD-RGIEYMGYMADMSIESPEETVMKQHIR 473

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++D+L+ LDSRERQIL LRFGL DHQP++LE IG+ +KVSKEW+R+IEKKALTKLRN+
Sbjct: 474  KDIHDILQSLDSRERQILILRFGLNDHQPKSLEYIGKIYKVSKEWIRKIEKKALTKLRNE 533

Query: 521  ATISNLDFYLDL 486
            A  S L++YLDL
Sbjct: 534  ANTSKLNYYLDL 545


>gb|KOM48614.1| hypothetical protein LR48_Vigan07g231800 [Vigna angularis]
          Length = 528

 Score =  535 bits (1377), Expect = e-149
 Identities = 282/432 (65%), Positives = 341/432 (78%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLM+NL  L ETFADSEA +L  DI LQL KLGALELFN CLSRSL  S + D+ D +P+
Sbjct: 111  LLMKNLDVLEETFADSEASRLEKDIRLQLEKLGALELFNVCLSRSLGSSLVSDYADKVPN 170

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
            + +    +SK  E   +                     T V  QS  LKA+QE+LL F  
Sbjct: 171  KGKVVVPSSKKKENKTR--------------RKREIDVTAVSTQSLTLKANQEDLLGFSV 216

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            S VK A+   + R  VA+REAEM+KGVKVLAELEKIR AIE+ TK+V +L+ WAEASGVD
Sbjct: 217  SVVKRATNSKSKRVMVAKREAEMAKGVKVLAELEKIRTAIEDDTKRVVTLNHWAEASGVD 276

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVLQQ LHHG YC+DELIRS+RSLVL++ARKYRGMGIAL+DLLQAGYVGVL+GAERFD 
Sbjct: 277  EKVLQQLLHHGYYCRDELIRSSRSLVLFLARKYRGMGIALDDLLQAGYVGVLQGAERFDS 336

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTYVQYWIRKSI R+V RY+RG++IPWSL+RA+ QIQKARK LKST  K PDD+
Sbjct: 337  TRGYKFSTYVQYWIRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKCPDDW 396

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSLDKI+SASNCL++VAS  QK+G CLS+ Y E +PDT+I SPE AV+KQHM+
Sbjct: 397  EIAKMTGLSLDKIKSASNCLRIVASIDQKVGHCLSIEYNELLPDTTIESPENAVLKQHMK 456

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++DLLKGL+SRERQ+LTLRFGL D+QP++L+DIG  FKVSKE +R+IEK ALTKLR++
Sbjct: 457  KDVHDLLKGLNSRERQVLTLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRDE 516

Query: 521  ATISNLDFYLDL 486
            AT S+L +YLDL
Sbjct: 517  ATTSDLHYYLDL 528


>ref|XP_014504966.1| PREDICTED: RNA polymerase sigma factor sigC [Vigna radiata var.
            radiata]
          Length = 545

 Score =  532 bits (1370), Expect = e-148
 Identities = 280/432 (64%), Positives = 340/432 (78%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLM+NL  L ETFADSEA +L  DI LQL KLGALELFN CLSRSL  S + D+ D +P+
Sbjct: 128  LLMKNLDVLEETFADSEASRLEKDIRLQLEKLGALELFNVCLSRSLGSSLVSDYADKVPN 187

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
            + +    +SK  E   +                     T V  QS  LKA+QE+LL F  
Sbjct: 188  KSKVVVPSSKKKENKTR--------------RKREIDVTTVSTQSLTLKANQEDLLGFSV 233

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            S VK A+   + R  VA+REAEM+KGVKVLAELEKIR AIE+ TK+V +L+ WAEASGVD
Sbjct: 234  SVVKRATNSKSKRVMVAKREAEMAKGVKVLAELEKIRTAIEDDTKRVVTLNHWAEASGVD 293

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVLQQ LHHG YC+DELIRS+RSLVL+++RKYRGMGIAL+DLLQAGYVGVL+GAERFD 
Sbjct: 294  EKVLQQLLHHGYYCRDELIRSSRSLVLFLSRKYRGMGIALDDLLQAGYVGVLQGAERFDS 353

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTYVQYWIRKSI R+V RY+RG++IPWSL+RA+ QIQKARK LKST  K PDD 
Sbjct: 354  TRGYKFSTYVQYWIRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKCPDDL 413

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSLDKI+SASNCL++VAS  QK+G+CL + Y E +PDT+I SPE AV+KQHM+
Sbjct: 414  EIAKMTGLSLDKIKSASNCLRIVASIDQKVGNCLGIEYNELLPDTTIESPENAVLKQHMK 473

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++DLLKGL+SRERQ+LTLRFGL D+QP++L+DIG  FKVSKE +R+IEK ALTKLR++
Sbjct: 474  KDVHDLLKGLNSRERQVLTLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRDE 533

Query: 521  ATISNLDFYLDL 486
            AT S+L +YLDL
Sbjct: 534  ATTSDLHYYLDL 545


>ref|XP_003588449.1| RNA polymerase sigma factor [Medicago truncatula]
            gi|355477497|gb|AES58700.1| RNA polymerase sigma factor
            [Medicago truncatula]
          Length = 549

 Score =  525 bits (1352), Expect = e-146
 Identities = 281/436 (64%), Positives = 337/436 (77%), Gaps = 4/436 (0%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLMENLG L ETFADSEAL+L  +I+LQL KLGALELFN CL+ S   S I + T  + +
Sbjct: 123  LLMENLGVLEETFADSEALRLEKNIILQLEKLGALELFNVCLTTSFGTSCISNCTHKVLE 182

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSP--PLKADQENLLCF 1428
            QV E+K N KVD+Y  KV V                 +  + P S   PL  +QE+ L  
Sbjct: 183  QVEENKRNHKVDDYTGKVIVHSSKRKENRRRKRG---SVSIAPSSRSLPLDDNQEDPLRS 239

Query: 1427 LPSS-VKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEAS 1251
             P+S VK AS   N RA +A+RE EMSKGVKVLAELEKIR AIEE TKQV SLSSWAE S
Sbjct: 240  SPASFVKRASNTKNKRAVIAQREVEMSKGVKVLAELEKIRTAIEEDTKQVVSLSSWAETS 299

Query: 1250 GVDEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAER 1071
            GVDEKVLQQ L+HG YC+DELIRSTRSLVLY ARKYRGMGIALEDLLQ GY+GVL+GAER
Sbjct: 300  GVDEKVLQQQLYHGYYCRDELIRSTRSLVLYFARKYRGMGIALEDLLQVGYIGVLQGAER 359

Query: 1070 FDCTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFP 891
            FD T+GYRFSTYVQYWIRKS+SRMVA+YARGI +PWS+++A++QIQKARK LK+T+ K+P
Sbjct: 360  FDSTKGYRFSTYVQYWIRKSMSRMVAKYARGITVPWSMNKAISQIQKARKVLKNTTMKYP 419

Query: 890  DDYEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQ 711
            +D EIAK+TGLSLDKI SAS+CL+ V+S  +       + Y+  MPD SI SPEE VMKQ
Sbjct: 420  NDLEIAKMTGLSLDKIMSASHCLRTVSSMYR------GIEYMGHMPDLSIESPEETVMKQ 473

Query: 710  HMRRDLYDLLKGLDSRERQILTLRFGLG-DHQPRTLEDIGRCFKVSKEWVRRIEKKALTK 534
            H+++D++D+L+ LDSRERQI+ LRFGL  DHQP++LE IG+ FKVSKEW+R+IEKKALTK
Sbjct: 474  HIKKDIHDILQSLDSRERQIIILRFGLNDDHQPKSLEYIGKIFKVSKEWIRKIEKKALTK 533

Query: 533  LRNKATISNLDFYLDL 486
            LRN+  IS L++YLDL
Sbjct: 534  LRNETNISKLNYYLDL 549


>ref|XP_007161319.1| hypothetical protein PHAVU_001G059800g [Phaseolus vulgaris]
            gi|561034783|gb|ESW33313.1| hypothetical protein
            PHAVU_001G059800g [Phaseolus vulgaris]
          Length = 538

 Score =  499 bits (1285), Expect = e-138
 Identities = 271/432 (62%), Positives = 329/432 (76%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLM+NL  L E FADSEAL+L   I LQL KLGALE+FN  LS       + D+ D + +
Sbjct: 128  LLMKNLDVLEEAFADSEALRLEKAIRLQLEKLGALEIFNVYLSL------VTDYADKVHN 181

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
            + +    +SK  +   +                     T V  QS  LK +QE+LL F  
Sbjct: 182  KGKCVVPSSKKKQNKTR--------------RKREIGVTAVSSQSLTLKVNQEDLLGFSV 227

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            S VK A+   N R  VA+REAEM+KGVKVLAELEKIR A+EE TK+V  L+ WAEASGVD
Sbjct: 228  SVVKRATNSKNKRMMVAKREAEMAKGVKVLAELEKIRTALEEDTKRVVCLNHWAEASGVD 287

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVLQQ LHHG YC+DEL+RS+RSLVLY+ARKYRGMGIAL+DLLQAGYVGVL+GAERFD 
Sbjct: 288  EKVLQQLLHHGYYCRDELVRSSRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDS 347

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTYVQYWIRKSI R+V RY+RG++IPWSL+RA+ QIQKARK LKST  K PDD 
Sbjct: 348  TRGYKFSTYVQYWIRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKSPDDC 407

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSLDKI+SASNCL++VAS  QK+G+  S+ Y E +PDT+I SPE  V+KQHM+
Sbjct: 408  EIAKMTGLSLDKIKSASNCLRIVASIDQKVGN-FSIEYNELLPDTTIESPENGVLKQHMK 466

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++DLLKGL+SRERQIL+LRFGL D+QP++L+DIG  FKVSKE +R+IEK ALTKLRN+
Sbjct: 467  KDVHDLLKGLNSRERQILSLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRNE 526

Query: 521  ATISNLDFYLDL 486
            AT S+L +YLDL
Sbjct: 527  ATTSDLHYYLDL 538


>ref|XP_007161320.1| hypothetical protein PHAVU_001G059800g [Phaseolus vulgaris]
            gi|561034784|gb|ESW33314.1| hypothetical protein
            PHAVU_001G059800g [Phaseolus vulgaris]
          Length = 529

 Score =  488 bits (1255), Expect = e-135
 Identities = 268/432 (62%), Positives = 323/432 (74%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLM+NL  L E FADSEAL+L   I LQL KLGALE+FN  LS       + D+ D + +
Sbjct: 128  LLMKNLDVLEEAFADSEALRLEKAIRLQLEKLGALEIFNVYLSL------VTDYADKVHN 181

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
            + +    +SK  +   +                     T V  QS  LK +QE+LL F  
Sbjct: 182  KGKCVVPSSKKKQNKTR--------------RKREIGVTAVSSQSLTLKVNQEDLLGFSV 227

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            S VK A+   N R  VA+REAEM+KGVKVLAELEKIR A+EE TK+V  L+ WAEASGVD
Sbjct: 228  SVVKRATNSKNKRMMVAKREAEMAKGVKVLAELEKIRTALEEDTKRVVCLNHWAEASGVD 287

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVLQQ LHHG YC+DEL+RS+RSLVLY+ARKYRGMGIAL+DLLQAGYVGVL+GAERFD 
Sbjct: 288  EKVLQQLLHHGYYCRDELVRSSRSLVLYLARKYRGMGIALDDLLQAGYVGVLQGAERFDS 347

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTYVQYWIRKSI R+V RY+RG++IPWSL+RA+ QIQKARK LKST  K PDD 
Sbjct: 348  TRGYKFSTYVQYWIRKSILRVVERYSRGVIIPWSLNRAIKQIQKARKVLKSTHKKSPDDC 407

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSLDKI+SASNCL++VAS  QK          E +PDT+I SPE  V+KQHM+
Sbjct: 408  EIAKMTGLSLDKIKSASNCLRIVASIDQK----------ELLPDTTIESPENGVLKQHMK 457

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++DLLKGL+SRERQIL+LRFGL D+QP++L+DIG  FKVSKE +R+IEK ALTKLRN+
Sbjct: 458  KDVHDLLKGLNSRERQILSLRFGLIDNQPKSLQDIGTLFKVSKERIRKIEKIALTKLRNE 517

Query: 521  ATISNLDFYLDL 486
            AT S+L +YLDL
Sbjct: 518  ATTSDLHYYLDL 529


>ref|XP_012077339.1| PREDICTED: RNA polymerase sigma factor sigC [Jatropha curcas]
          Length = 606

 Score =  473 bits (1216), Expect = e-130
 Identities = 255/436 (58%), Positives = 324/436 (74%), Gaps = 4/436 (0%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLE--PSRILDFTDGL 1608
            LL+ENL  L E+FADS+ LKL  DI+LQL KLGAL+LFN CL+R+LE   + +LDF+D  
Sbjct: 172  LLLENLNILEESFADSDVLKLERDILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLP 231

Query: 1607 PDQVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTAT-EVLPQSP-PLKADQENLL 1434
             + ++E K +   +  + K+ V               S      +P  P PLK+ Q N  
Sbjct: 232  TENIQECKRDGTSNGNVYKIIVCTGKKEERKSRRERASLKNGHKVPCFPLPLKSIQ-NGR 290

Query: 1433 CFLPSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEA 1254
                S  K  S   + R  +AR EAEMS+GVKVLA LEKIR  +E+ T +  SLS WAEA
Sbjct: 291  GKATSFDKKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEA 350

Query: 1253 SGVDEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAE 1074
            +G+D KVLQQ LH G YC+DEL+RSTRSLVL++AR YRGMGIALEDLLQAG +GVL+GAE
Sbjct: 351  AGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAE 410

Query: 1073 RFDCTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKF 894
            RFD  RGYRFSTYVQYWIRKS+S++V+R+ARGI IP +LSRA+NQIQKARK+L ++  K+
Sbjct: 411  RFDDARGYRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKY 470

Query: 893  PDDYEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMK 714
            PDD +IA+ TGLSL KI SAS CL+VV S  QK+GDC +  YLEF+ DT+I SPEEAVM+
Sbjct: 471  PDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMR 530

Query: 713  QHMRRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTK 534
            QHM +D++DLL+GLD+RERQ+L LR+GL DHQP++LE+IGR F VSKEWVRR+EKK +T+
Sbjct: 531  QHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTR 590

Query: 533  LRNKATISNLDFYLDL 486
            LRN+ T  NL +Y++L
Sbjct: 591  LRNEETCRNLRYYVNL 606


>gb|KDP34138.1| hypothetical protein JCGZ_07709 [Jatropha curcas]
          Length = 564

 Score =  473 bits (1216), Expect = e-130
 Identities = 255/436 (58%), Positives = 324/436 (74%), Gaps = 4/436 (0%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLE--PSRILDFTDGL 1608
            LL+ENL  L E+FADS+ LKL  DI+LQL KLGAL+LFN CL+R+LE   + +LDF+D  
Sbjct: 130  LLLENLNILEESFADSDVLKLERDILLQLGKLGALKLFNTCLTRTLEVQTANVLDFSDLP 189

Query: 1607 PDQVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTAT-EVLPQSP-PLKADQENLL 1434
             + ++E K +   +  + K+ V               S      +P  P PLK+ Q N  
Sbjct: 190  TENIQECKRDGTSNGNVYKIIVCTGKKEERKSRRERASLKNGHKVPCFPLPLKSIQ-NGR 248

Query: 1433 CFLPSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEA 1254
                S  K  S   + R  +AR EAEMS+GVKVLA LEKIR  +E+ T +  SLS WAEA
Sbjct: 249  GKATSFDKKTSNSKSRRLMIARNEAEMSRGVKVLANLEKIRTTLEQETGRAVSLSCWAEA 308

Query: 1253 SGVDEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAE 1074
            +G+D KVLQQ LH G YC+DEL+RSTRSLVL++AR YRGMGIALEDLLQAG +GVL+GAE
Sbjct: 309  AGLDMKVLQQQLHFGWYCRDELVRSTRSLVLFLARNYRGMGIALEDLLQAGNMGVLQGAE 368

Query: 1073 RFDCTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKF 894
            RFD  RGYRFSTYVQYWIRKS+S++V+R+ARGI IP +LSRA+NQIQKARK+L ++  K+
Sbjct: 369  RFDDARGYRFSTYVQYWIRKSMSKIVSRHARGIQIPCTLSRAINQIQKARKNLSASHGKY 428

Query: 893  PDDYEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMK 714
            PDD +IA+ TGLSL KI SAS CL+VV S  QK+GDC +  YLEF+ DT+I SPEEAVM+
Sbjct: 429  PDDEDIAEFTGLSLAKIESASRCLRVVGSIDQKMGDCFNAKYLEFIHDTTIKSPEEAVMR 488

Query: 713  QHMRRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTK 534
            QHM +D++DLL+GLD+RERQ+L LR+GL DHQP++LE+IGR F VSKEWVRR+EKK +T+
Sbjct: 489  QHMIKDMHDLLRGLDTRERQVLILRYGLKDHQPKSLEEIGRVFHVSKEWVRRLEKKVMTR 548

Query: 533  LRNKATISNLDFYLDL 486
            LRN+ T  NL +Y++L
Sbjct: 549  LRNEETCRNLRYYVNL 564


>ref|XP_002516489.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223544309|gb|EEF45830.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 560

 Score =  462 bits (1190), Expect = e-127
 Identities = 249/437 (56%), Positives = 317/437 (72%), Gaps = 6/437 (1%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LL+ENL  L ++FADS+A KL  DI+LQL KLGAL+LFN CL+R+LE + +L+ +D   +
Sbjct: 127  LLLENLNILEQSFADSDASKLEEDILLQLGKLGALKLFNTCLTRTLETTNVLEVSDVHTE 186

Query: 1601 QVREHKNNSKVDEYMDKVFV------QXXXXXXXXXXXXXXSTATEVLPQSPPLKADQEN 1440
             + E   N        KV V      +               + +  LP  P     ++ 
Sbjct: 187  IIGECNINGTSINNQIKVVVHTAKKEERKSRRERASARKGHKSPSLPLPSRPIQSGSEKP 246

Query: 1439 LLCFLPSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWA 1260
             +    SS K ASK  + R  +AR EAEM++G+KVLA+LEKIR  +EE T++V SLS WA
Sbjct: 247  TV----SSGKKASKSKSRRLIIARNEAEMARGIKVLADLEKIRTTLEEETERVVSLSCWA 302

Query: 1259 EASGVDEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRG 1080
            EA+G+D KVLQQ L  G YC+DELI+STRSLVLY AR YRG GIALEDLLQAG +GVL G
Sbjct: 303  EAAGLDVKVLQQQLSFGWYCRDELIKSTRSLVLYFARNYRGTGIALEDLLQAGNLGVLEG 362

Query: 1079 AERFDCTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSS 900
            AERFD TRGYRFSTYVQYWIRKS+S++V+R ARGI IP +LSRA+ QIQKARK+L +++ 
Sbjct: 363  AERFDHTRGYRFSTYVQYWIRKSMSKIVSRLARGIQIPCTLSRAIYQIQKARKALTTSNG 422

Query: 899  KFPDDYEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAV 720
            K+PDD EIAK TGLSL KI SAS CL+VV S  QKIG+ L+  YLEF+PDTS+ SPEE V
Sbjct: 423  KYPDDDEIAKYTGLSLAKIESASRCLRVVGSIDQKIGESLNAKYLEFLPDTSVQSPEEVV 482

Query: 719  MKQHMRRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKAL 540
            M+QHM +D+++LL+ LDSRERQ+L LRFGL D+QP++LE+IGR F VSKEWVRR+EK+ +
Sbjct: 483  MRQHMIQDMHNLLRSLDSRERQVLILRFGLNDYQPKSLEEIGRHFHVSKEWVRRLEKRVM 542

Query: 539  TKLRNKATISNLDFYLD 489
            T+LRN+ T  NL  Y++
Sbjct: 543  TRLRNEETCRNLRHYIN 559


>ref|XP_007012219.1| RNApolymerase sigma-subunit C, putative [Theobroma cacao]
            gi|508782582|gb|EOY29838.1| RNApolymerase sigma-subunit
            C, putative [Theobroma cacao]
          Length = 848

 Score =  460 bits (1183), Expect = e-126
 Identities = 246/436 (56%), Positives = 312/436 (71%), Gaps = 5/436 (1%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLMENL  L ETFADS+ L L  +I+LQL + GAL+LFN CLSR+L+ S ILD +D +P 
Sbjct: 417  LLMENLDVLEETFADSDVLTLEREILLQLGRFGALKLFNTCLSRTLKASNILDLSD-VPA 475

Query: 1601 QVREHKNNSKVDEYMDKVFV-----QXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENL 1437
               +   N  VD   D + V     +                +T+++P +      Q+  
Sbjct: 476  NSGDCNMNLSVDGQKDNIVVCSRKKKQRKKIRERALENPTIISTQLMPSNTLHGRFQKPK 535

Query: 1436 LCFLPSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAE 1257
            +    SS K  S   + R  +AR EAEMSKGVKV+A LE+IR  +EE T + ASLS WAE
Sbjct: 536  V----SSAKRVSDSRSRRLRIARNEAEMSKGVKVVANLERIRTTLEEETGRAASLSCWAE 591

Query: 1256 ASGVDEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGA 1077
            A+GV EKVLQQ+L  G YC+DEL+RSTRSLVLY AR YRG+GIA EDL+QAG +GVL+GA
Sbjct: 592  AAGVSEKVLQQHLRFGWYCRDELLRSTRSLVLYFARNYRGLGIAHEDLIQAGSLGVLQGA 651

Query: 1076 ERFDCTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSK 897
            ERFD TRGYRFSTYVQ+WIRKS+SR+VAR+ARGI +P +LSRA+ QIQKARK+L  +  K
Sbjct: 652  ERFDHTRGYRFSTYVQFWIRKSVSRIVARHARGIQVPCTLSRAIVQIQKARKALSKSHGK 711

Query: 896  FPDDYEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVM 717
            +PD+  IAK TGLSL KIRSA+ C++VV S  QKIGDC++  YLEF+PD S+ SPE+ VM
Sbjct: 712  YPDEDAIAKFTGLSLAKIRSANKCMRVVGSIDQKIGDCMNAKYLEFIPDLSVRSPEKTVM 771

Query: 716  KQHMRRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALT 537
            +QHM+ D++DLL GLD+RERQ++ LR+GL    P++LE+IGR F VSKEW+RRIE KA+ 
Sbjct: 772  RQHMKEDIHDLLNGLDARERQVMVLRYGLKGSPPKSLEEIGRLFHVSKEWIRRIEMKAMK 831

Query: 536  KLRNKATISNLDFYLD 489
            KLR+K T  NL  YLD
Sbjct: 832  KLRDKETCRNLSHYLD 847


>gb|KHG01096.1| RNA polymerase sigma factor rpoD [Gossypium arboreum]
          Length = 556

 Score =  453 bits (1166), Expect = e-124
 Identities = 243/431 (56%), Positives = 304/431 (70%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            +LM+NL  L ETF DS+ L+L ++I++QL +LGAL LFN  LS   +PS I D +D   +
Sbjct: 128  VLMDNLHVLEETFVDSDVLRLESEILVQLGRLGALNLFNIFLSH--KPSNIFDLSDDAAN 185

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
             + E   N  VD   DK+ V                 AT +  Q PP             
Sbjct: 186  SL-ECIMNGLVDSEKDKIIVSSRKNKQRRKRREKAVEATTISTQLPPTNTLHGRYQKPKR 244

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            SS K  S     R+ VAR E EMSKGVKV+A LE+IRA +EE T ++ SLS WAEA+ + 
Sbjct: 245  SSPKRMSDSRKGRSAVARNEVEMSKGVKVVANLERIRATLEEETGRIVSLSCWAEAAKLT 304

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVLQQ+LH+G YC+DELIRSTRSLVLY AR YRG+GIA EDL+QAG +GVL+GAERFD 
Sbjct: 305  EKVLQQHLHYGWYCRDELIRSTRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGAERFDH 364

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTY+QYWIRKSISRMVAR+ARGI +P +LSRA+ QIQKARK+L  +  K+P++ 
Sbjct: 365  TRGYKFSTYIQYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPEED 424

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSL KIRSA+ C +VV S  QKIGD ++  YLEF+PD SI SPE+ VM+QHM+
Sbjct: 425  EIAKITGLSLSKIRSANKCFRVVGSIDQKIGDYINAKYLEFIPDASICSPEKTVMRQHMK 484

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
             D+ DLL GL+ RERQ++ LR+GL    P++LE+IGR F VSKEW+RRIE KA+ KLR+K
Sbjct: 485  EDINDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFCVSKEWIRRIEMKAMAKLRDK 544

Query: 521  ATISNLDFYLD 489
             T  NL  YLD
Sbjct: 545  ETCRNLSHYLD 555


>gb|KJB65617.1| hypothetical protein B456_010G103500 [Gossypium raimondii]
          Length = 458

 Score =  448 bits (1153), Expect = e-123
 Identities = 239/431 (55%), Positives = 299/431 (69%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            +L +NL  L ETF DS+ L+L  +I+LQL +LGAL LFN  LS   +PS I D +D   +
Sbjct: 30   VLKDNLNVLEETFVDSDVLRLEREILLQLGRLGALNLFNIFLSH--KPSNIFDLSDVAAN 87

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
             V E   N  VD   DK+ V                  T +  Q  P             
Sbjct: 88   SV-ECNMNGLVDSEKDKIIVSSRKNKQRRKRREKAVETTIISTQLLPTNTLHGRYQKPKR 146

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            SS K  S     R  VAR E EMSKGVKV+A LE+IR  +EE T ++ SLS WAEA+ + 
Sbjct: 147  SSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTLEEETGRMVSLSCWAEAAKLT 206

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EK LQQ+LH+G YC+DELIR+TRSLVLY AR YRG+GIA EDL+QAG +GVL+GAERFD 
Sbjct: 207  EKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGAERFDH 266

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTY+ YWIRKSISRMVAR+ARGI +P +LSRA+ QIQKARK+L  +  K+P++ 
Sbjct: 267  TRGYKFSTYIHYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPEED 326

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSL KIRSA+ C +VV S  QKIGDC++  YLEF+PD SI SPE+ VM+QHM+
Sbjct: 327  EIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDASICSPEKTVMRQHMK 386

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
             D++DLL GL+ RERQ++ LR+GL    P++LE+IGR F+VSKEW+RRIE KA+ KLR+K
Sbjct: 387  EDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDK 446

Query: 521  ATISNLDFYLD 489
             T  NL  YLD
Sbjct: 447  ETCRNLSHYLD 457


>ref|XP_012450465.1| PREDICTED: RNA polymerase sigma factor sigC-like isoform X4
            [Gossypium raimondii] gi|763798660|gb|KJB65615.1|
            hypothetical protein B456_010G103500 [Gossypium
            raimondii]
          Length = 565

 Score =  448 bits (1153), Expect = e-123
 Identities = 239/431 (55%), Positives = 299/431 (69%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            +L +NL  L ETF DS+ L+L  +I+LQL +LGAL LFN  LS   +PS I D +D   +
Sbjct: 137  VLKDNLNVLEETFVDSDVLRLEREILLQLGRLGALNLFNIFLSH--KPSNIFDLSDVAAN 194

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
             V E   N  VD   DK+ V                  T +  Q  P             
Sbjct: 195  SV-ECNMNGLVDSEKDKIIVSSRKNKQRRKRREKAVETTIISTQLLPTNTLHGRYQKPKR 253

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            SS K  S     R  VAR E EMSKGVKV+A LE+IR  +EE T ++ SLS WAEA+ + 
Sbjct: 254  SSPKRMSDSRKRRLAVARNEVEMSKGVKVVANLERIRTTLEEETGRMVSLSCWAEAAKLT 313

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EK LQQ+LH+G YC+DELIR+TRSLVLY AR YRG+GIA EDL+QAG +GVL+GAERFD 
Sbjct: 314  EKALQQHLHYGWYCRDELIRTTRSLVLYFARNYRGLGIAHEDLIQAGSIGVLQGAERFDH 373

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGY+FSTY+ YWIRKSISRMVAR+ARGI +P +LSRA+ QIQKARK+L  +  K+P++ 
Sbjct: 374  TRGYKFSTYIHYWIRKSISRMVARHARGIQVPCTLSRAIVQIQKARKALSKSHGKYPEED 433

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSL KIRSA+ C +VV S  QKIGDC++  YLEF+PD SI SPE+ VM+QHM+
Sbjct: 434  EIAKITGLSLSKIRSANKCFRVVGSIDQKIGDCINAKYLEFIPDASICSPEKTVMRQHMK 493

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
             D++DLL GL+ RERQ++ LR+GL    P++LE+IGR F+VSKEW+RRIE KA+ KLR+K
Sbjct: 494  EDIHDLLNGLEKRERQVMVLRYGLTGSPPKSLEEIGRLFRVSKEWIRRIEMKAMAKLRDK 553

Query: 521  ATISNLDFYLD 489
             T  NL  YLD
Sbjct: 554  ETCRNLSHYLD 564


>ref|XP_009367413.1| PREDICTED: RNA polymerase sigma factor sigC-like [Pyrus x
            bretschneideri]
          Length = 556

 Score =  448 bits (1152), Expect = e-123
 Identities = 239/430 (55%), Positives = 312/430 (72%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LL++NL  L ETFA+S+ LKL  +I+LQL KLGAL+LF+ACLSR+L  S   D +D    
Sbjct: 126  LLLKNLDALEETFANSDVLKLEKEILLQLGKLGALQLFDACLSRTLTSSSFFDLSDIPTV 185

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
            Q+  HK + KVD    K+ V+                   V   S P K+  E       
Sbjct: 186  QIEGHKMDKKVDNDRGKIIVRSGKKKERRSRKRALDNV-RVSSDSLPPKSTWEGSKHPTA 244

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            SS K ASK    R T+A+ EAEMS GVKV+A LE+I+A +E+ T  VA+LS WAEA+GV 
Sbjct: 245  SSAKRASKYRKSRLTIAKNEAEMSTGVKVIANLERIKATLEKETGTVATLSCWAEAAGVR 304

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            EKVL Q LH G YCQDELIRSTRSLVLY+AR YRG+G+A++DLLQAG  G+L+GAER+D 
Sbjct: 305  EKVLLQKLHFGWYCQDELIRSTRSLVLYLARSYRGLGVAMDDLLQAGNQGLLQGAERYDH 364

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            +RGYRFSTYV+YWI+KS+SR+VAR+AR I IP++LS+A+NQIQKARK+  ++  ++PDD 
Sbjct: 365  SRGYRFSTYVRYWIKKSMSRLVARHAREIQIPFTLSKAINQIQKARKATYNSHMRYPDDD 424

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TGLSL +IRSAS CL+VV S + K+ D     ++E  PDTSI SPEE V +QHM+
Sbjct: 425  EIAKITGLSLVRIRSASTCLRVVGSVNDKMWDNSPGTFMESTPDTSIKSPEETVTRQHMK 484

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
            +D++DLLK L+S+ERQ+L LR+GL ++ P++LE+IG+ F VSKEW+R+IEKKALTKLR+ 
Sbjct: 485  KDIHDLLKCLNSKERQVLVLRYGLNNYDPKSLEEIGKLFDVSKEWIRKIEKKALTKLRDD 544

Query: 521  ATISNLDFYL 492
             T  +L  YL
Sbjct: 545  ETHRSLSHYL 554


>ref|XP_010047303.1| PREDICTED: RNA polymerase sigma factor sigC [Eucalyptus grandis]
            gi|629114510|gb|KCW79185.1| hypothetical protein
            EUGRSUZ_C00620 [Eucalyptus grandis]
          Length = 556

 Score =  445 bits (1145), Expect = e-122
 Identities = 237/432 (54%), Positives = 311/432 (71%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LLM+NL  L ET ADS AL L  DI+LQL +LGAL+LF+ CLS++ +     + +D    
Sbjct: 129  LLMDNLNALEETLADSNALNLERDILLQLGRLGALKLFHTCLSKAFDAPDACEVSDA--- 185

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSPPLKADQENLLCFLP 1422
             V E K +S+ D ++ ++                 +   +  P S    A+Q+ L     
Sbjct: 186  -VVEKKTSSERDNHVKRIIRSGKSEMRKSRRERNSAKPNQNPPFSLLSTANQKWLQQPSV 244

Query: 1421 SSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGVD 1242
            SS++ AS     R+ +AR EAEMS+GVKV+AELEK+RA +EE + QV SL +WAEA+GVD
Sbjct: 245  SSLRRASNSKRRRSIIARNEAEMSRGVKVVAELEKLRAILEEESGQVPSLRTWAEAAGVD 304

Query: 1241 EKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFDC 1062
            E VL+QNLH G +C+DEL+RSTRSLV+++ R YRG+GIA EDL+QAG +GVLRGAERFD 
Sbjct: 305  ENVLRQNLHFGWFCRDELLRSTRSLVIFLTRNYRGLGIAHEDLIQAGNMGVLRGAERFDH 364

Query: 1061 TRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDDY 882
            TRGYRFSTYVQYWIRKS+SRMVA +ARGI IP +L+ AVNQIQKA+KSL +   K+PDD 
Sbjct: 365  TRGYRFSTYVQYWIRKSMSRMVAWHARGIRIPTTLATAVNQIQKAQKSLNNHRRKYPDDM 424

Query: 881  EIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHMR 702
            EIAK+TG S+ K+RSAS CL+VV S  QKIGDC++  Y+EF PD S+ SPEE V++Q+M 
Sbjct: 425  EIAKLTGFSVAKVRSASQCLRVVGSIDQKIGDCINAKYMEFTPDRSLRSPEETVLRQNMS 484

Query: 701  RDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRNK 522
              + +LL GLD RERQ+L LR+GL D+Q ++LE+IGR F VSKEW+RRIE+KA+ KLR+K
Sbjct: 485  SQIQELLSGLDFRERQVLILRYGLKDNQVKSLEEIGRLFNVSKEWIRRIERKAMEKLRDK 544

Query: 521  ATISNLDFYLDL 486
               S+L  Y ++
Sbjct: 545  DVYSSLSHYRNI 556


>ref|XP_002275831.1| PREDICTED: RNA polymerase sigma factor sigC [Vitis vinifera]
            gi|296081598|emb|CBI20603.3| unnamed protein product
            [Vitis vinifera]
          Length = 561

 Score =  444 bits (1142), Expect = e-121
 Identities = 237/433 (54%), Positives = 302/433 (69%), Gaps = 1/433 (0%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LL+ENL  L E FADS  ++L  DIM+QL +LGAL+LF  CLSR+L+ S   D      +
Sbjct: 129  LLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTE 188

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSP-PLKADQENLLCFL 1425
             +RE + N  VD+++DKV V+                  + +   P P K  ++      
Sbjct: 189  HIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPS 248

Query: 1424 PSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGV 1245
             S+VK        R   A+ EAEMSKGVK++A LE+IRA +EE    VASLS+WAEA+GV
Sbjct: 249  VSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGV 308

Query: 1244 DEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFD 1065
            D+KVLQQ L  G YC+DEL+RST SLVLYIAR YRGMG+A ED+LQAG +GVL+GAERFD
Sbjct: 309  DKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFD 368

Query: 1064 CTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDD 885
             T+GYRFSTYVQYWIRKS+S +VAR+ARG+ IP++L+RA+ QIQKARK+L  +  ++PDD
Sbjct: 369  HTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDD 428

Query: 884  YEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHM 705
             EIAK TGLSL KIRSA NCL+VV S  Q   DC     LEF PDTSI SPEE  M+Q  
Sbjct: 429  NEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCK 488

Query: 704  RRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRN 525
            R+D+++LLKGLD RERQIL LR+G G+ Q ++LE+IGR F VSKEW+R++EK AL  LR+
Sbjct: 489  RKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRD 548

Query: 524  KATISNLDFYLDL 486
            +    NL  Y+D+
Sbjct: 549  EEICQNLRHYVDV 561


>emb|CAN83254.1| hypothetical protein VITISV_036980 [Vitis vinifera]
          Length = 611

 Score =  444 bits (1142), Expect = e-121
 Identities = 237/433 (54%), Positives = 302/433 (69%), Gaps = 1/433 (0%)
 Frame = -3

Query: 1781 LLMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPD 1602
            LL+ENL  L E FADS  ++L  DIM+QL +LGAL+LF  CLSR+L+ S   D      +
Sbjct: 179  LLLENLDILEEMFADSNMVRLERDIMVQLGRLGALKLFQICLSRTLKTSTSFDLFSAPTE 238

Query: 1601 QVREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXSTATEVLPQSP-PLKADQENLLCFL 1425
             +RE + N  VD+++DKV V+                  + +   P P K  ++      
Sbjct: 239  HIRECQTNGTVDDHLDKVVVRSGKKEERKSKRERALEKADNIYAFPLPSKTIRKGPGRPS 298

Query: 1424 PSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGV 1245
             S+VK        R   A+ EAEMSKGVK++A LE+IRA +EE    VASLS+WAEA+GV
Sbjct: 299  VSTVKRTLNSRRKRLMNAKNEAEMSKGVKLVANLERIRATLEEEIGHVASLSNWAEAAGV 358

Query: 1244 DEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFD 1065
            D+KVLQQ L  G YC+DEL+RST SLVLYIAR YRGMG+A ED+LQAG +GVL+GAERFD
Sbjct: 359  DKKVLQQQLQFGWYCRDELLRSTHSLVLYIARNYRGMGVAFEDILQAGNLGVLQGAERFD 418

Query: 1064 CTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDD 885
             T+GYRFSTYVQYWIRKS+S +VAR+ARG+ IP++L+RA+ QIQKARK+L  +  ++PDD
Sbjct: 419  HTKGYRFSTYVQYWIRKSMSTLVARHARGVKIPFTLNRAIGQIQKARKALYKSHGRYPDD 478

Query: 884  YEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHM 705
             EIAK TGLSL KIRSA NCL+VV S  Q   DC     LEF PDTSI SPEE  M+Q  
Sbjct: 479  NEIAKFTGLSLAKIRSAGNCLRVVGSTDQSFQDCWGATILEFTPDTSIKSPEEGFMQQCK 538

Query: 704  RRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRN 525
            R+D+++LLKGLD RERQIL LR+G G+ Q ++LE+IGR F VSKEW+R++EK AL  LR+
Sbjct: 539  RKDIHNLLKGLDPRERQILVLRYGFGEQQRKSLEEIGRRFNVSKEWIRKLEKTALANLRD 598

Query: 524  KATISNLDFYLDL 486
            +    NL  Y+D+
Sbjct: 599  EEICQNLRHYVDV 611


>ref|XP_011019551.1| PREDICTED: RNA polymerase sigma factor sigC [Populus euphratica]
          Length = 559

 Score =  444 bits (1141), Expect = e-121
 Identities = 235/433 (54%), Positives = 312/433 (72%), Gaps = 2/433 (0%)
 Frame = -3

Query: 1778 LMENLGTLGETFADSEALKLRNDIMLQLRKLGALELFNACLSRSLEPSRILDFTDGLPDQ 1599
            L++NL TL +  AD +ALKL  DI+LQL +LGALE FNACLSR+L+ S  LD +    + 
Sbjct: 129  LLDNLDTLEKLVADLDALKLERDILLQLGRLGALEFFNACLSRTLQTSNALDLSAVPTEN 188

Query: 1598 VREHKNNSKVDEYMDKVFVQXXXXXXXXXXXXXXST--ATEVLPQSPPLKADQENLLCFL 1425
              E K +  +D+   K  V+              ++    +    S P K+ Q NL    
Sbjct: 189  TGESKTDGMLDDLTGKTVVRTGKKEERKFRRGRAASDNGKKTTSLSLPSKSVQNNLQ--K 246

Query: 1424 PSSVKGASKCDNIRATVARREAEMSKGVKVLAELEKIRAAIEECTKQVASLSSWAEASGV 1245
            P+ VK  S   + R+ +AR EA+M++GVKV ++LE+IR  +EE T QV SLS WAEA+G+
Sbjct: 247  PTFVKRTSSSSSRRSLIARNEAKMTRGVKVASDLERIRTTLEEETGQVVSLSCWAEATGL 306

Query: 1244 DEKVLQQNLHHGQYCQDELIRSTRSLVLYIARKYRGMGIALEDLLQAGYVGVLRGAERFD 1065
            D+KVLQQ L  G YC+DELI++T SLVLYIAR YRGMGIA+EDL+QAG +G+L+GAERFD
Sbjct: 307  DKKVLQQQLQFGWYCRDELIKNTHSLVLYIARNYRGMGIAMEDLIQAGNLGLLQGAERFD 366

Query: 1064 CTRGYRFSTYVQYWIRKSISRMVARYARGIVIPWSLSRAVNQIQKARKSLKSTSSKFPDD 885
             TRGYRFSTYVQYWIRKS+ ++V R+ARGI IP++LSR++N+IQKARK+L ++  ++PDD
Sbjct: 367  PTRGYRFSTYVQYWIRKSMLKIVERHARGIQIPYALSRSINKIQKARKALSNSDGRYPDD 426

Query: 884  YEIAKVTGLSLDKIRSASNCLKVVASNSQKIGDCLSVNYLEFMPDTSIGSPEEAVMKQHM 705
            +E+AK TGLSL KI SA  CL+VVAS  QKIG+     Y EF+PD SI +PEEAVM+QHM
Sbjct: 427  WEVAKFTGLSLAKIESAKKCLRVVASLDQKIGEGHYAKYSEFIPDMSIQNPEEAVMRQHM 486

Query: 704  RRDLYDLLKGLDSRERQILTLRFGLGDHQPRTLEDIGRCFKVSKEWVRRIEKKALTKLRN 525
            R ++YDLL+GL+SRERQ++ LR+G  D+QP++L +IGR F VSKE VR+IEKK + KLR+
Sbjct: 487  REEIYDLLRGLESRERQVMVLRYGFKDNQPKSLAEIGRLFHVSKERVRKIEKKIMIKLRD 546

Query: 524  KATISNLDFYLDL 486
            +    NL  Y+ L
Sbjct: 547  EGIRRNLSRYMIL 559