BLASTX nr result

ID: Wisteria21_contig00016291 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00016291
         (267 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KHN11543.1| Heterogeneous nuclear ribonucleoprotein Q [Glycin...    57   4e-06
ref|XP_003534480.1| PREDICTED: nucleolin-like isoform X1 [Glycin...    57   4e-06

>gb|KHN11543.1| Heterogeneous nuclear ribonucleoprotein Q [Glycine soja]
          Length = 774

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = -2

Query: 254 MPPKVVKRGXXXXXXXXXXXXAIXXXXXXXXXXXXXXEVVVKNHEENPVADVVVEKKEKP 75
           MPP++VKRG            A                VVVKN+EENPV D VVE  EKP
Sbjct: 1   MPPRIVKRGAAAKRASRGSSKAAPENQPEPETAE----VVVKNNEENPVVDAVVE--EKP 54

Query: 74  IDANQLASEAVPNG---LENNEEEVKE 3
           +D  Q   E VPNG   +ENNEEE+KE
Sbjct: 55  VDVEQ-EHEEVPNGSAKVENNEEEIKE 80


>ref|XP_003534480.1| PREDICTED: nucleolin-like isoform X1 [Glycine max]
           gi|571479178|ref|XP_006587782.1| PREDICTED:
           nucleolin-like isoform X2 [Glycine max]
           gi|947091546|gb|KRH40211.1| hypothetical protein
           GLYMA_09G245000 [Glycine max]
           gi|947091547|gb|KRH40212.1| hypothetical protein
           GLYMA_09G245000 [Glycine max]
          Length = 778

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 40/87 (45%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
 Frame = -2

Query: 254 MPPKVVKRGXXXXXXXXXXXXAIXXXXXXXXXXXXXXEVVVKNHEENPVADVVVEKKEKP 75
           MPP++VKRG            A                VVVKN+EENPV D VVE  EKP
Sbjct: 1   MPPRIVKRGAAAKRASRGSSKAAPENQPEPETAE----VVVKNNEENPVVDAVVE--EKP 54

Query: 74  IDANQLASEAVPNG---LENNEEEVKE 3
           +D  Q   E VPNG   +ENNEEE+KE
Sbjct: 55  VDVEQ-EHEEVPNGSAKVENNEEEIKE 80


Top