BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00015706
         (1809 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containi...   767   0.0  
gb|KHN22079.1| Pentatricopeptide repeat-containing protein, mito...   763   0.0  
ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containi...   762   0.0  
ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containi...   754   0.0  
ref|XP_007144829.1| hypothetical protein PHAVU_007G187600g [Phas...   745   0.0  
gb|KOM55089.1| hypothetical protein LR48_Vigan10g098100 [Vigna a...   743   0.0  
ref|XP_003630353.2| PPR containing plant protein [Medicago trunc...   742   0.0  
ref|XP_014514380.1| PREDICTED: pentatricopeptide repeat-containi...   730   0.0  
gb|KHN04927.1| Pentatricopeptide repeat-containing protein, mito...   691   0.0  
ref|XP_009338042.1| PREDICTED: pentatricopeptide repeat-containi...   682   0.0  
ref|XP_008240094.1| PREDICTED: pentatricopeptide repeat-containi...   678   0.0  
ref|XP_008393245.1| PREDICTED: pentatricopeptide repeat-containi...   677   0.0  
ref|XP_009346139.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   663   0.0  
ref|XP_010663464.1| PREDICTED: pentatricopeptide repeat-containi...   658   0.0  
ref|XP_008453300.1| PREDICTED: pentatricopeptide repeat-containi...   657   0.0  
ref|XP_012438895.1| PREDICTED: pentatricopeptide repeat-containi...   654   0.0  
ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containi...   649   0.0  
ref|XP_012080409.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_007037613.1| Pentatricopeptide repeat-containing protein,...   640   0.0  
ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containi...   639   e-180

>ref|XP_003536123.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Glycine max]
            gi|947085371|gb|KRH34092.1| hypothetical protein
            GLYMA_10G162500 [Glycine max]
          Length = 509

 Score =  767 bits (1981), Expect = 0.0
 Identities = 389/495 (78%), Positives = 428/495 (86%), Gaps = 2/495 (0%)
 Frame = -2

Query: 1661 SPLFPHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSELL 1482
            SPLFP   SS    HF   TLF P S F TRHFSS+    TQT     D IAS+LSSELL
Sbjct: 30   SPLFPRHSSS----HFYSRTLFTP-SFFITRHFSSE----TQT-----DEIASSLSSELL 75

Query: 1481 KDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDD 1302
            K+PDSD LSVSQRL LSFSHITPTPNL+LQTLNLSP+AGRTV+GFHQWL+SNP+F+HTDD
Sbjct: 76   KEPDSDALSVSQRLNLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFSHTDD 135

Query: 1301 TLSYFVDYFGRRKDFKATHDVLAGGG--AGPKTLLSAIDRLVRAGRPNRAVQFFERMERD 1128
            TLSYFVDYFGRRKDFKATHDVLA     AGPKTL SAIDRLVRAGR ++AVQFFERMERD
Sbjct: 136  TLSYFVDYFGRRKDFKATHDVLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFFERMERD 195

Query: 1127 YGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDA 948
            YGLKRDRDSLK+VVEKLC  GFASYAEKMVKDLA+EFFPDEATCD+LI GWC+DGK+D+A
Sbjct: 196  YGLKRDRDSLKVVVEKLCSEGFASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGKLDEA 255

Query: 947  RRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVET 768
            +RLAGEMYRGGF+LGVGAYNAMLDCVCK+CR KDPFQLHSE +KVLVEM+Y GVPRN ET
Sbjct: 256  QRLAGEMYRGGFDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPRNTET 315

Query: 767  FNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMK 588
            FNVL+TNLCK+RKTEDAL L H MGEWGCYPNETTF+VLI+SLYQAARLEEGDEMIDRM+
Sbjct: 316  FNVLITNLCKIRKTEDALGLLHSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMR 375

Query: 587  SAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNR 408
            SAG+G  LDKKAY++FL ILCGIER+DHAL+VFAMMK D CEPGV TY+LLM  LGAHNR
Sbjct: 376  SAGFGEFLDKKAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLMGKLGAHNR 435

Query: 407  VDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQ 228
            +DK NALFNEA+SRGLPV+ KEYAVDPR+L            KRETLPEKMARKR RLKQ
Sbjct: 436  IDKVNALFNEAKSRGLPVILKEYAVDPRYL-KKKKKVVKGVKKRETLPEKMARKRSRLKQ 494

Query: 227  IRLSFVKKPKRMMAR 183
            IRLS+VKKPKR+M R
Sbjct: 495  IRLSYVKKPKRVMGR 509


>gb|KHN22079.1| Pentatricopeptide repeat-containing protein, mitochondrial [Glycine
            soja]
          Length = 509

 Score =  763 bits (1970), Expect = 0.0
 Identities = 389/499 (77%), Positives = 428/499 (85%), Gaps = 5/499 (1%)
 Frame = -2

Query: 1664 TSPLFPHQPSSKP---SSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALS 1494
            TSP   H P   P   SSHF   TLF P S F TRHFSS+    TQT     D IAS+LS
Sbjct: 22   TSPSPIHHPPLFPRHSSSHFYSRTLFTP-SFFITRHFSSE----TQT-----DEIASSLS 71

Query: 1493 SELLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFT 1314
            SELLK+PDSD LSVSQRL LSFSHITPTPNL+LQTLNLSP+AGRTV+GFHQWL+SNP+F+
Sbjct: 72   SELLKEPDSDALSVSQRLNLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFS 131

Query: 1313 HTDDTLSYFVDYFGRRKDFKATHDVLAGGG--AGPKTLLSAIDRLVRAGRPNRAVQFFER 1140
            HTDDTLSYFVDYFGRRKDFKATHDVLA     AGPKTL SAIDRLVRAGR ++AVQFFER
Sbjct: 132  HTDDTLSYFVDYFGRRKDFKATHDVLAAASPAAGPKTLASAIDRLVRAGRSSQAVQFFER 191

Query: 1139 MERDYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGK 960
            MERDYGLKRDRDSLK+VVEKLC  GFASYAEKMVKDLA+EFFPDEATCD+LI GWC+DGK
Sbjct: 192  MERDYGLKRDRDSLKVVVEKLCSKGFASYAEKMVKDLAREFFPDEATCDMLIRGWCIDGK 251

Query: 959  VDDARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPR 780
            +D+A+RLAGEMYRGGF+LGVGAYNAMLDCVCK+CR KDPFQLHSE +KVLVEM+Y GVPR
Sbjct: 252  LDEAQRLAGEMYRGGFDLGVGAYNAMLDCVCKLCREKDPFQLHSEAEKVLVEMEYRGVPR 311

Query: 779  NVETFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMI 600
            N ETFNVL+TNLCK+RKTEDAL L   MGEWGCYPNETTF+VLI+SLYQAARLEEGDEMI
Sbjct: 312  NTETFNVLITNLCKIRKTEDALGLLRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMI 371

Query: 599  DRMKSAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLG 420
            DRM+SAG+G  LDKKAY++FL ILCGIER+DHAL+VFAMMK D CEPGV TY+LLM  LG
Sbjct: 372  DRMRSAGFGEFLDKKAYYQFLKILCGIERVDHALSVFAMMKDDGCEPGVITYDLLMGKLG 431

Query: 419  AHNRVDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRR 240
            AHNR+DK NALFNEA+SRGLPV+ KEYAVDPR+L            KRETLPEKMARKR 
Sbjct: 432  AHNRIDKVNALFNEAKSRGLPVILKEYAVDPRYL-KKKKKVVKGVKKRETLPEKMARKRS 490

Query: 239  RLKQIRLSFVKKPKRMMAR 183
            RLKQIRLS+VKKPKR+M R
Sbjct: 491  RLKQIRLSYVKKPKRVMGR 509


>ref|XP_003556470.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like isoformX1 [Glycine max]
            gi|947042960|gb|KRG92684.1| hypothetical protein
            GLYMA_20G225100 [Glycine max]
          Length = 509

 Score =  762 bits (1968), Expect = 0.0
 Identities = 388/494 (78%), Positives = 425/494 (86%), Gaps = 2/494 (0%)
 Frame = -2

Query: 1658 PLFPHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSELLK 1479
            PLFP QPSS    HF   TL  P SLF  RHFSS+    TQT     D IA +LSSELLK
Sbjct: 31   PLFPQQPSS----HFHSRTLLTPSSLFIIRHFSSE----TQT-----DQIAHSLSSELLK 77

Query: 1478 DPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDT 1299
            +PDSD LSVSQRL LSFSHITPTPNL+LQTLNLS E+GRTV+GFHQWL+SNP+F+HTDDT
Sbjct: 78   EPDSDALSVSQRLHLSFSHITPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQFSHTDDT 137

Query: 1298 LSYFVDYFGRRKDFKATHDVL--AGGGAGPKTLLSAIDRLVRAGRPNRAVQFFERMERDY 1125
            LSYFVDYFGRRKDFKATHDVL  A   AGPKTL SAIDRLVRAGRP++AVQFFERMERDY
Sbjct: 138  LSYFVDYFGRRKDFKATHDVLSAASPAAGPKTLASAIDRLVRAGRPSQAVQFFERMERDY 197

Query: 1124 GLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDAR 945
            GLKRDR SLK+VVEKLC  GFASYAEKMVKDLAK FFPDEATCD+LI GWCVDGK+D+A+
Sbjct: 198  GLKRDRASLKVVVEKLCSKGFASYAEKMVKDLAKVFFPDEATCDMLIKGWCVDGKLDEAQ 257

Query: 944  RLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETF 765
            RLAGEMYRGGFELGVG+YNAMLDCVCK+CR KDPFQLHSE +KVLVEM++ GVPRNVETF
Sbjct: 258  RLAGEMYRGGFELGVGSYNAMLDCVCKLCRQKDPFQLHSEAEKVLVEMEHRGVPRNVETF 317

Query: 764  NVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKS 585
            NVL+TNLCK+RKTEDAL LF  MGEWGCYPNETTF+VLI+SLYQAARLEEGDEMIDRM+S
Sbjct: 318  NVLITNLCKIRKTEDALGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRS 377

Query: 584  AGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRV 405
            AG+G  LDKKAY++ L ILCGIER+DHAL+VFAMMK   CEPG+ TY+LLM  LGAHNR+
Sbjct: 378  AGFGEFLDKKAYYQLLKILCGIERVDHALSVFAMMKDGGCEPGLITYDLLMGKLGAHNRI 437

Query: 404  DKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQI 225
            DKANALFNEA+SRGLPVM KEYAVDPR+L            KRETLPEKMARKR RLKQI
Sbjct: 438  DKANALFNEAKSRGLPVMLKEYAVDPRYL--KKKKVVKGVKKRETLPEKMARKRSRLKQI 495

Query: 224  RLSFVKKPKRMMAR 183
            RLSFVKKPKR+M R
Sbjct: 496  RLSFVKKPKRVMGR 509


>ref|XP_004503897.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Cicer arietinum]
          Length = 516

 Score =  754 bits (1948), Expect = 0.0
 Identities = 378/496 (76%), Positives = 418/496 (84%)
 Frame = -2

Query: 1667 ETSPLFPHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSE 1488
            E  P FPHQ   K S     P  F P  LF+ +HFSSKPV+ TQT P++ DPIA+ALSS+
Sbjct: 28   EPPPYFPHQTPPKFS-----PNFFPPSPLFQIKHFSSKPVSPTQTPPNELDPIATALSSQ 82

Query: 1487 LLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHT 1308
            LL + DSDP SV++RL LSFSHITPTPN++LQTL+LSPEAGR V+GFHQWLASNPKFTHT
Sbjct: 83   LLNESDSDPSSVAERLHLSFSHITPTPNVILQTLDLSPEAGRIVLGFHQWLASNPKFTHT 142

Query: 1307 DDTLSYFVDYFGRRKDFKATHDVLAGGGAGPKTLLSAIDRLVRAGRPNRAVQFFERMERD 1128
            D+T+SYFVDYFGRR DFKA   VL  GGAGPKTL+SAIDRLVRA RPN+AVQFF+RME+D
Sbjct: 143  DETVSYFVDYFGRRNDFKAMDKVLTAGGAGPKTLISAIDRLVRADRPNQAVQFFDRMEKD 202

Query: 1127 YGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDA 948
            YGL RDR SLK+VVEKLCL G+ SYAEKMVKDLA EFFPDEA CDLL+TG+CVDGK++ A
Sbjct: 203  YGLTRDRGSLKVVVEKLCLKGYGSYAEKMVKDLANEFFPDEAMCDLLVTGYCVDGKIEQA 262

Query: 947  RRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVET 768
            RRLAGEMYRGGFELGVGAYNAMLDC+ KICRLKDPF+LHSE +KVLVEMDYHGVPRNVET
Sbjct: 263  RRLAGEMYRGGFELGVGAYNAMLDCISKICRLKDPFKLHSESEKVLVEMDYHGVPRNVET 322

Query: 767  FNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMK 588
            FNVL+TNLCK+RKT+ AL LF+ MG W C PNETTF+VLI+SLYQAARLEEGD MID MK
Sbjct: 323  FNVLITNLCKIRKTDAALGLFYSMGGWRCNPNETTFIVLIRSLYQAARLEEGDVMIDGMK 382

Query: 587  SAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNR 408
            SAGYG  LD+KAYF FLTILCGIERIDHAL +F MMKAD CEPGVKTY+LLM+ LGAHNR
Sbjct: 383  SAGYGDFLDEKAYFGFLTILCGIERIDHALKIFGMMKADGCEPGVKTYDLLMTKLGAHNR 442

Query: 407  VDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQ 228
            VDKANALFNEA S+GL V  KEY VDPR L            KRETLPEKMARKR RLKQ
Sbjct: 443  VDKANALFNEACSKGLAVTPKEYVVDPRFL---KKKRVVKEKKRETLPEKMARKRSRLKQ 499

Query: 227  IRLSFVKKPKRMMARA 180
            IRLSFVKKPKR M RA
Sbjct: 500  IRLSFVKKPKRSMGRA 515


>ref|XP_007144829.1| hypothetical protein PHAVU_007G187600g [Phaseolus vulgaris]
            gi|561018019|gb|ESW16823.1| hypothetical protein
            PHAVU_007G187600g [Phaseolus vulgaris]
          Length = 505

 Score =  745 bits (1924), Expect = 0.0
 Identities = 380/497 (76%), Positives = 427/497 (85%), Gaps = 4/497 (0%)
 Frame = -2

Query: 1661 SPLFPHQP--SSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSE 1488
            SP+ P  P      ++HF   TLF+P SLF  RHFSS+    TQT     DPIA++LSSE
Sbjct: 21   SPIHPPPPLIPGDSTTHFHSRTLFSP-SLFLNRHFSSE----TQT-----DPIANSLSSE 70

Query: 1487 LLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHT 1308
            LLK+ DSDPLSVSQRL LSFSHITPTPNL+LQTLNLSP+AGRTV+GFHQWL+SNP+FTHT
Sbjct: 71   LLKELDSDPLSVSQRLHLSFSHITPTPNLILQTLNLSPQAGRTVLGFHQWLSSNPQFTHT 130

Query: 1307 DDTLSYFVDYFGRRKDFKATHDVLAGGGA--GPKTLLSAIDRLVRAGRPNRAVQFFERME 1134
            D TLSYFVDYFGRRKDFKATHD+L+   A  GPKTL SAIDRLVRAGRP++AVQFFERME
Sbjct: 131  DHTLSYFVDYFGRRKDFKATHDLLSAAAAASGPKTLESAIDRLVRAGRPSQAVQFFERME 190

Query: 1133 RDYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVD 954
            RDYGLKRDR SLK+VVEKLC  GFASYAEKMVK+LA+EFFPDEATCDLLI GWCVDGK++
Sbjct: 191  RDYGLKRDRCSLKVVVEKLCSKGFASYAEKMVKELAREFFPDEATCDLLIRGWCVDGKLE 250

Query: 953  DARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNV 774
            +A+RLAGEMYRGGFELGVGAYNAMLDCVCK+CR KD F+L SE +KVLVEM+Y GVPRNV
Sbjct: 251  EAQRLAGEMYRGGFELGVGAYNAMLDCVCKLCREKDLFRLDSEAEKVLVEMEYRGVPRNV 310

Query: 773  ETFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDR 594
            ETFNVL+TNLCK+RKTEDAL LF  MGEWGC PNE+TF+VLI+SLYQAARLEEGDEMIDR
Sbjct: 311  ETFNVLITNLCKIRKTEDALNLFSSMGEWGCSPNESTFLVLIRSLYQAARLEEGDEMIDR 370

Query: 593  MKSAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAH 414
            M+SAGYG  LDKKAY++FL ILCGIERIDHAL+VFAMMKAD C PGV+TY+LLM  LGAH
Sbjct: 371  MRSAGYGEFLDKKAYYQFLKILCGIERIDHALSVFAMMKADGCVPGVQTYDLLMGKLGAH 430

Query: 413  NRVDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRL 234
            NR+D+ANALFNEA++RGLPV+ K+YAVDPR+             KRETLPEKMARKRRRL
Sbjct: 431  NRIDRANALFNEAKTRGLPVILKDYAVDPRY--QKKKRVVKAVKKRETLPEKMARKRRRL 488

Query: 233  KQIRLSFVKKPKRMMAR 183
             QIRLSFVKKP+R M R
Sbjct: 489  NQIRLSFVKKPQRAMGR 505


>gb|KOM55089.1| hypothetical protein LR48_Vigan10g098100 [Vigna angularis]
          Length = 504

 Score =  743 bits (1917), Expect = 0.0
 Identities = 377/493 (76%), Positives = 422/493 (85%), Gaps = 1/493 (0%)
 Frame = -2

Query: 1658 PLFPHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSELLK 1479
            PLFP   S+    HF F TLF+P SLF TRHFSS     TQ      DPIA  LS ELL 
Sbjct: 28   PLFPRHSST----HFHFRTLFSP-SLFITRHFSS----VTQI-----DPIAHNLSYELLN 73

Query: 1478 DPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDT 1299
            +PDSDPLSVS+RL LS SH+TPTP+L+LQTLNL P+AGR V+GFHQWL+SNP+FTHTD T
Sbjct: 74   EPDSDPLSVSKRLHLSNSHVTPTPDLILQTLNLCPQAGRNVLGFHQWLSSNPQFTHTDHT 133

Query: 1298 LSYFVDYFGRRKDFKATHDVLAGGGA-GPKTLLSAIDRLVRAGRPNRAVQFFERMERDYG 1122
            LSYFVDYFGRRKDFKATHD+L+     GPKTL SAIDRLVRAGRP++AVQFFERMERDYG
Sbjct: 134  LSYFVDYFGRRKDFKATHDLLSTAAVVGPKTLESAIDRLVRAGRPSQAVQFFERMERDYG 193

Query: 1121 LKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARR 942
            +KRDR SLK+VVEKLC  GFASYAEKMVKDLA+EFFPDE TCDLLI GWCVDGK+++A+R
Sbjct: 194  MKRDRCSLKVVVEKLCSKGFASYAEKMVKDLAREFFPDEETCDLLIRGWCVDGKLEEAQR 253

Query: 941  LAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFN 762
            LAGEMYRGGFELGVGAYNAMLDCVCK+CR KDPF+L SEV+K+LVEMD+ GVPRNVETFN
Sbjct: 254  LAGEMYRGGFELGVGAYNAMLDCVCKLCREKDPFRLDSEVEKMLVEMDFRGVPRNVETFN 313

Query: 761  VLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSA 582
            VL+TNLCK+R+TEDALRLF  MGEWGC+PN +TF+VLI+SLYQAARLEEGDEMIDRM+SA
Sbjct: 314  VLITNLCKIRRTEDALRLFGSMGEWGCHPNGSTFLVLIRSLYQAARLEEGDEMIDRMRSA 373

Query: 581  GYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVD 402
            GYG  LDKK Y++FL ILCGIERIDHAL+VFAMMKAD C PGVKTY+LLM  LG+HNRVD
Sbjct: 374  GYGEFLDKKTYYQFLRILCGIERIDHALSVFAMMKADGCVPGVKTYDLLMGKLGSHNRVD 433

Query: 401  KANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIR 222
            +ANALFNEA+SRGLPV+ K+YAVDPRHL            KRETLPEKMARKR RLKQIR
Sbjct: 434  RANALFNEAKSRGLPVILKDYAVDPRHL--KKKSVVKVVKKRETLPEKMARKRSRLKQIR 491

Query: 221  LSFVKKPKRMMAR 183
            LSFVKKP+RMM R
Sbjct: 492  LSFVKKPRRMMGR 504


>ref|XP_003630353.2| PPR containing plant protein [Medicago truncatula]
            gi|388513923|gb|AFK45023.1| unknown [Medicago truncatula]
            gi|657375667|gb|AET04829.2| PPR containing plant protein
            [Medicago truncatula]
          Length = 521

 Score =  742 bits (1916), Expect = 0.0
 Identities = 372/489 (76%), Positives = 413/489 (84%), Gaps = 4/489 (0%)
 Frame = -2

Query: 1649 PHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSK----PVATTQTGPDDPDPIASALSSELL 1482
            PH   S  SSHF    LF PPSLF+  HFSS+    PV+TT+     PDPIA A+SSELL
Sbjct: 34   PHINPSNFSSHFHNRALFTPPSLFQIEHFSSESKPEPVSTTE-----PDPIAIAISSELL 88

Query: 1481 KDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDD 1302
            K+PDSDP SV+QRL LSFSHITPTPNL+L+TLNLS EAGR V+GFHQWLASNPKFTHTD+
Sbjct: 89   KEPDSDPSSVTQRLNLSFSHITPTPNLILETLNLSLEAGRNVLGFHQWLASNPKFTHTDE 148

Query: 1301 TLSYFVDYFGRRKDFKATHDVLAGGGAGPKTLLSAIDRLVRAGRPNRAVQFFERMERDYG 1122
            TLSYFVDYFGRRKDFKAT  +L+GGG G KTLLSA+DRLVRAGR ++AVQFFERME+DYG
Sbjct: 149  TLSYFVDYFGRRKDFKATDKILSGGGGGQKTLLSAVDRLVRAGRQSQAVQFFERMEKDYG 208

Query: 1121 LKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARR 942
            LKRDR S+K+VVEKLCL G+ASYAEKM  DLAKEFFPDE  CDLL+ G+C+DGK+++ARR
Sbjct: 209  LKRDRSSMKVVVEKLCLKGYASYAEKMTTDLAKEFFPDEEICDLLVAGYCIDGKIEEARR 268

Query: 941  LAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFN 762
            LAGEMYRGGFELGV AYNAMLDCVCK+CR KDPFQLHSE  KVLVEMD HGVPRN+ETFN
Sbjct: 269  LAGEMYRGGFELGVRAYNAMLDCVCKMCREKDPFQLHSESKKVLVEMDSHGVPRNLETFN 328

Query: 761  VLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSA 582
            VL+TN CK+RKT DAL LF+ M +W C PNETTF+VLIKSLYQAARLEEGD MID MKSA
Sbjct: 329  VLITNFCKIRKTNDALGLFNFMRQWRCNPNETTFLVLIKSLYQAARLEEGDAMIDGMKSA 388

Query: 581  GYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVD 402
            GYGA LDKKAYF+FLTILCGIERI+HAL +F MMKAD CEPGVKTY+LLM  LGAH+RVD
Sbjct: 389  GYGAFLDKKAYFDFLTILCGIERINHALKIFTMMKADGCEPGVKTYDLLMKKLGAHDRVD 448

Query: 401  KANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIR 222
            KANALFNEA+SRGL V  KE+ VDPR              KRETLPEKMARKRRRLKQIR
Sbjct: 449  KANALFNEARSRGLDVTLKEHVVDPRFSKKKEKKAVKAEKKRETLPEKMARKRRRLKQIR 508

Query: 221  LSFVKKPKR 195
            LSFVKKPK+
Sbjct: 509  LSFVKKPKK 517


>ref|XP_014514380.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Vigna radiata var. radiata]
          Length = 504

 Score =  730 bits (1884), Expect = 0.0
 Identities = 373/499 (74%), Positives = 420/499 (84%), Gaps = 5/499 (1%)
 Frame = -2

Query: 1664 TSPLFPHQPS----SKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASAL 1497
            TSP   H P        S+HF F TLF+P SLF  RHFSS             DPIA  L
Sbjct: 18   TSPSPIHPPPLLFPRHSSTHFHFRTLFSP-SLFINRHFSSVTKI---------DPIAHNL 67

Query: 1496 SSELLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKF 1317
            S ELL +P+SDP SVS+RL LSFSHITPTP+L+LQTLNL P+AGR V+GFH WL+SNP+F
Sbjct: 68   SFELLNEPNSDPHSVSKRLHLSFSHITPTPDLILQTLNLCPQAGRNVLGFHHWLSSNPQF 127

Query: 1316 THTDDTLSYFVDYFGRRKDFKATHDVLAGGGA-GPKTLLSAIDRLVRAGRPNRAVQFFER 1140
            THTD TLSYFVDYFGRRKDFKATHD+L+   A GPKTL SAI RLVRA RP++AVQFFER
Sbjct: 128  THTDHTLSYFVDYFGRRKDFKATHDLLSTAAAVGPKTLESAIGRLVRAVRPSQAVQFFER 187

Query: 1139 MERDYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGK 960
            MERDYG+KRDR SLK+VVEKLC  GFASYAEKMVKDLA+EFFPDE TCDLLI GWCV+GK
Sbjct: 188  MERDYGMKRDRCSLKVVVEKLCSKGFASYAEKMVKDLAREFFPDEETCDLLIRGWCVNGK 247

Query: 959  VDDARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPR 780
            +++A+RLAGEMYRGGFELGVG+YNAML+CVCK+CR KDPF+L SEV+KVLVEM+Y GVPR
Sbjct: 248  LEEAQRLAGEMYRGGFELGVGSYNAMLECVCKLCREKDPFRLDSEVEKVLVEMEYRGVPR 307

Query: 779  NVETFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMI 600
            NVETFNV++TNLCK+R+TEDALRLF  MGEWGCYPNE+TF+VLI+SLYQAARLEEGDEMI
Sbjct: 308  NVETFNVVITNLCKIRRTEDALRLFGSMGEWGCYPNESTFLVLIRSLYQAARLEEGDEMI 367

Query: 599  DRMKSAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLG 420
            DRM+SAGYG  LDKKAY++FL ILCGIERIDHAL+VFAMMKAD C PGVKTY+LLM  LG
Sbjct: 368  DRMRSAGYGEFLDKKAYYQFLRILCGIERIDHALSVFAMMKADGCVPGVKTYDLLMGKLG 427

Query: 419  AHNRVDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRR 240
            +HNRVD+ANALFNEA+SRGLPV+ K+YAVDPR+L            KRETLPEKMARKR 
Sbjct: 428  SHNRVDRANALFNEAKSRGLPVILKDYAVDPRYL--KKKSVVKVVKKRETLPEKMARKRS 485

Query: 239  RLKQIRLSFVKKPKRMMAR 183
            RLKQIRLSFVKKPKRMM R
Sbjct: 486  RLKQIRLSFVKKPKRMMGR 504


>gb|KHN04927.1| Pentatricopeptide repeat-containing protein, mitochondrial [Glycine
            soja]
          Length = 489

 Score =  691 bits (1783), Expect = 0.0
 Identities = 359/494 (72%), Positives = 399/494 (80%), Gaps = 2/494 (0%)
 Frame = -2

Query: 1658 PLFPHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSELLK 1479
            PLFP QPSS    HF   TL  P SLF  RHFSS+    TQT     D IA +LSSELLK
Sbjct: 31   PLFPQQPSS----HFHSRTLLTPSSLFIIRHFSSE----TQT-----DQIAHSLSSELLK 77

Query: 1478 DPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDT 1299
            +PDSD LSVSQRL LSFSHITPTPNL+LQTLNLS E+GRTV+GFHQWL+SNP+F+HTDDT
Sbjct: 78   EPDSDALSVSQRLHLSFSHITPTPNLILQTLNLSHESGRTVLGFHQWLSSNPQFSHTDDT 137

Query: 1298 LSYFVDYFGRRKDFKATHDVL--AGGGAGPKTLLSAIDRLVRAGRPNRAVQFFERMERDY 1125
            LSYF+DY G  KDFKA H+VL  A   AGPKTL S I+ L+R       VQFFERMERDY
Sbjct: 138  LSYFIDYSGHYKDFKAMHNVLYAASPAAGPKTLASVINCLIRV------VQFFERMERDY 191

Query: 1124 GLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDAR 945
            GLKRD  +              +YAEKMVKDLAK FFPDEATCD+LI GWCVDGK+D+A+
Sbjct: 192  GLKRDHHN--------------AYAEKMVKDLAKVFFPDEATCDMLIKGWCVDGKLDEAQ 237

Query: 944  RLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETF 765
            RLAGEMYRGGFELGVG+YNAMLDCVCK+CR KDPFQLHSE +KVLVEM++ GVPRNVETF
Sbjct: 238  RLAGEMYRGGFELGVGSYNAMLDCVCKLCRQKDPFQLHSEAEKVLVEMEHRGVPRNVETF 297

Query: 764  NVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKS 585
            NVL+TNLCK+RKTEDAL LF  MGEWGCYPNETTF+VLI+SLYQAARLEEGDEMIDRM+S
Sbjct: 298  NVLITNLCKIRKTEDALGLFRSMGEWGCYPNETTFLVLIRSLYQAARLEEGDEMIDRMRS 357

Query: 584  AGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRV 405
            AG+G  LDKKAY++ L ILCGIER+DHAL+VFAMMK   CEPG+ TY+LLM  LGAHNR+
Sbjct: 358  AGFGEFLDKKAYYQLLKILCGIERVDHALSVFAMMKDGGCEPGLITYDLLMGKLGAHNRI 417

Query: 404  DKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQI 225
            DKANALFNEA+SRGLPVM KEYAVDPR+L            KRETLPEKMARKR RLKQI
Sbjct: 418  DKANALFNEAKSRGLPVMLKEYAVDPRYL--KKKKVVKGVKKRETLPEKMARKRSRLKQI 475

Query: 224  RLSFVKKPKRMMAR 183
            RLSFVKKPKR+M R
Sbjct: 476  RLSFVKKPKRVMGR 489


>ref|XP_009338042.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Pyrus x bretschneideri]
          Length = 537

 Score =  682 bits (1760), Expect = 0.0
 Identities = 348/502 (69%), Positives = 394/502 (78%), Gaps = 9/502 (1%)
 Frame = -2

Query: 1658 PLFPHQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDP--IASALSSEL 1485
            P  P  P+    S     T  +   L     F SKP +++     DPD   +A +LSSEL
Sbjct: 35   PFLPQTPTHFRHSRPAIVTGTSSHFLSLPHFFLSKPFSSSAPSTQDPDQSELAQSLSSEL 94

Query: 1484 LKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTD 1305
            L+D  S+PLSV+QRLQLSFSHITPT  LVL  LN SPEAGRTV+GF+QWL SNP F HTD
Sbjct: 95   LQDSSSEPLSVTQRLQLSFSHITPTAPLVLNVLNQSPEAGRTVLGFNQWLISNPNFEHTD 154

Query: 1304 DTLSYFVDYFGRRKDFKATHDVL--AGGGAGPKTLLSAIDRLVRAGRPNRAVQFFERMER 1131
            +TLSYFVDYFGRRKDFKATHDV+  AGG AG KT  SAIDRLVRAGRP +AV FFE+ME+
Sbjct: 155  ETLSYFVDYFGRRKDFKATHDVIVSAGGVAGSKTFASAIDRLVRAGRPAQAVSFFEKMEK 214

Query: 1130 DYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDD 951
            DYGLKRD+DSLKLV+EKLC NGFAS AEKMVK LA EFFPDE  CDLLI GWCVDGK+++
Sbjct: 215  DYGLKRDKDSLKLVIEKLCENGFASNAEKMVKGLANEFFPDEYMCDLLIKGWCVDGKLEE 274

Query: 950  ARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVE 771
            ARRLAGEMYRGGFE+G  AYNA+LDCV K+CR KDPF+LHSEV+++LV+MD HGVPRNVE
Sbjct: 275  ARRLAGEMYRGGFEIGTTAYNAILDCVSKLCRKKDPFRLHSEVEEILVDMDTHGVPRNVE 334

Query: 770  TFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRM 591
            TFNVL++NLC +RKTEDAL LF RMGEWGCYPNETTF+VLI+SLYQAAR+ EGDEMIDRM
Sbjct: 335  TFNVLISNLCTIRKTEDALNLFERMGEWGCYPNETTFLVLIRSLYQAARIGEGDEMIDRM 394

Query: 590  KSAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHN 411
            KSAG+G +L KK Y+ FL ILCGIERIDHAL VF  MK D+CEPG+KTYELLM  L AHN
Sbjct: 395  KSAGFGEALKKKEYYGFLKILCGIERIDHALRVFKKMKEDKCEPGIKTYELLMGKLYAHN 454

Query: 410  RVDKANALFNEAQSRGLPVMSKEYAVDPRHL-----XXXXXXXXXXXXKRETLPEKMARK 246
            RVD+A ALFNEAQ RG+P+  K Y VDP  L                 KRET PEKMARK
Sbjct: 455  RVDRATALFNEAQKRGVPLTQKAYPVDPYFLKKKKELKALKKGVKKEKKRETFPEKMARK 514

Query: 245  RRRLKQIRLSFVKKPKRMMARA 180
            +RRLKQIRLSFVKKPK+M  RA
Sbjct: 515  KRRLKQIRLSFVKKPKKMQRRA 536


>ref|XP_008240094.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Prunus mume]
          Length = 531

 Score =  678 bits (1750), Expect = 0.0
 Identities = 340/494 (68%), Positives = 395/494 (79%), Gaps = 9/494 (1%)
 Frame = -2

Query: 1634 SKPSSHFQFP----TLFAPPSLFKTRHFS-SKPVATTQTGPDDPDP--IASALSSELLKD 1476
            S+  +HF +     T  A        HF  SKP +++ +   D D   +A +LSSELL D
Sbjct: 38   SRKPTHFHYAQPAITTTASSHFLSLLHFCVSKPFSSSTSPAHDSDQSQLAQSLSSELLID 97

Query: 1475 PDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDTL 1296
            P SDPLSV+QRLQLSFSHITPTP+LV   LNLSP+AGR V+GF++WL SNP F HTD+TL
Sbjct: 98   PSSDPLSVTQRLQLSFSHITPTPSLVQSVLNLSPDAGRAVIGFNEWLISNPTFEHTDETL 157

Query: 1295 SYFVDYFGRRKDFKATHDVL--AGGGAGPKTLLSAIDRLVRAGRPNRAVQFFERMERDYG 1122
            SYFVDYFGRRKDFKATHDV+  AGG AGPKT  S+IDRLVRAGRP +AV FFERME+DYG
Sbjct: 158  SYFVDYFGRRKDFKATHDVIVSAGGVAGPKTFASSIDRLVRAGRPAQAVSFFERMEKDYG 217

Query: 1121 LKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARR 942
            LKRD+ SL+LVVEKLC NGFAS AEKMVK LA EFFPDE  CDLLI GWC+DGK+++ARR
Sbjct: 218  LKRDKASLRLVVEKLCENGFASNAEKMVKSLANEFFPDEYICDLLIKGWCIDGKLEEARR 277

Query: 941  LAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFN 762
            LAGEMYRGGFE+G  AYNA+LDCV K+CR KDPF+LH E +++LV+MD HGVPRN ETFN
Sbjct: 278  LAGEMYRGGFEIGTTAYNAILDCVSKLCRKKDPFRLHLEAEQILVDMDTHGVPRNAETFN 337

Query: 761  VLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSA 582
            VL++NLCK+RKTEDAL LFHRMG+WGCYPNETTF+VLI+SLYQAAR+ EGDEMIDRMKSA
Sbjct: 338  VLISNLCKLRKTEDALNLFHRMGQWGCYPNETTFLVLIRSLYQAARIGEGDEMIDRMKSA 397

Query: 581  GYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVD 402
            G+G +LDKKAY+ F+ ILCGIERIDHA+ VF  MK D CEPG+K+Y+LL+  L AHNR D
Sbjct: 398  GFGGALDKKAYYGFMKILCGIERIDHAMRVFKKMKEDGCEPGIKSYDLLIGKLYAHNRAD 457

Query: 401  KANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIR 222
            +A ALFNEAQ RG+ +  K Y  DPR L            KRET PEKMARK+RRLKQIR
Sbjct: 458  RATALFNEAQKRGVALTQKAYQADPRFL-KKKPKAAKKEKKRETFPEKMARKKRRLKQIR 516

Query: 221  LSFVKKPKRMMARA 180
            LSFVKKPK+MM RA
Sbjct: 517  LSFVKKPKKMMRRA 530


>ref|XP_008393245.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Malus domestica]
          Length = 537

 Score =  677 bits (1746), Expect = 0.0
 Identities = 341/471 (72%), Positives = 385/471 (81%), Gaps = 9/471 (1%)
 Frame = -2

Query: 1565 FSSKPVATTQTGPDDPDP--IASALSSELLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQ 1392
            F SKP +++     DPD   +A + SSELL+D  SDPLSV+QRLQLSFSHITPT  LVL 
Sbjct: 66   FLSKPFSSSAPPTQDPDQSELAQSXSSELLQDSSSDPLSVTQRLQLSFSHITPTAPLVLN 125

Query: 1391 TLNLSPEAGRTVVGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHDVL--AGGGAG 1218
             LN SPEAGRTV+GF+QWL SNP F HTD+TLSYFVDYFGRRKDFKATHDV+  AGG AG
Sbjct: 126  VLNQSPEAGRTVLGFNQWLISNPNFEHTDETLSYFVDYFGRRKDFKATHDVIVSAGGVAG 185

Query: 1217 PKTLLSAIDRLVRAGRPNRAVQFFERMERDYGLKRDRDSLKLVVEKLCLNGFASYAEKMV 1038
             KT  SAIDRLVRAGRP +AV FFE+ME+DYGLKRD+DSLKLV+EKLC NGFAS AEKMV
Sbjct: 186  AKTFASAIDRLVRAGRPAQAVSFFEKMEKDYGLKRDKDSLKLVIEKLCENGFASNAEKMV 245

Query: 1037 KDLAKEFFPDEATCDLLITGWCVDGKVDDARRLAGEMYRGGFELGVGAYNAMLDCVCKIC 858
            K LA EFFPDE  CDLLI GWCVDGK+++ARRLAGEMYRGGFE+G  AYNA+LDCV K+C
Sbjct: 246  KGLANEFFPDEYMCDLLIKGWCVDGKLEEARRLAGEMYRGGFEIGSTAYNAILDCVSKLC 305

Query: 857  RLKDPFQLHSEVDKVLVEMDYHGVPRNVETFNVLVTNLCKMRKTEDALRLFHRMGEWGCY 678
            R KDPF+LHSEV+++LV+MD HGVPRNVETFNVL++NLCK+RKTEDAL LF RMGEWGCY
Sbjct: 306  RKKDPFRLHSEVEEILVDMDTHGVPRNVETFNVLISNLCKIRKTEDALNLFERMGEWGCY 365

Query: 677  PNETTFVVLIKSLYQAARLEEGDEMIDRMKSAGYGASLDKKAYFEFLTILCGIERIDHAL 498
            PNETTF+VLI+SLYQAAR+ EGDEMIDRMKSAG+G +L+KK Y+ F  ILCGIERIDHAL
Sbjct: 366  PNETTFLVLIRSLYQAARIGEGDEMIDRMKSAGFGEALNKKEYYGFXKILCGIERIDHAL 425

Query: 497  TVFAMMKADRCEPGVKTYELLMSNLGAHNRVDKANALFNEAQSRGLPVMSKEYAVDPRHL 318
             VF  MK D+CEPG+KTYELLM  L AHNRVD+A ALFNEAQ RG+P+  K Y VD   L
Sbjct: 426  RVFKKMKEDKCEPGIKTYELLMGKLYAHNRVDRATALFNEAQKRGVPLTQKAYPVDXYFL 485

Query: 317  -----XXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKRMMARA 180
                             KRET PEKMARK+RRLKQIRLSFVKKPK+M  RA
Sbjct: 486  KKKKELKALKKGAKKEKKRETFPEKMARKKRRLKQIRLSFVKKPKKMQRRA 536


>ref|XP_009346139.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein PNM1, mitochondrial-like [Pyrus x bretschneideri]
          Length = 538

 Score =  663 bits (1710), Expect = 0.0
 Identities = 335/473 (70%), Positives = 383/473 (80%), Gaps = 10/473 (2%)
 Frame = -2

Query: 1568 HFS-SKPVATTQTGPDDPDP--IASALSSELLKDPDSDPLSVSQRLQLSFSHITPTPNLV 1398
            HFS SKP +++     D D   +A +LSSELL+DP SDPLSV+QRLQLSFSHITPTP+LV
Sbjct: 64   HFSLSKPFSSSAPPTQDADQSELAQSLSSELLQDPSSDPLSVTQRLQLSFSHITPTPSLV 123

Query: 1397 LQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHDVL--AGGG 1224
            L  LN SPEAGRTV+GF+QWL SN  F HTD+TLSYFVDYFGRRKDFK THDV+  +GG 
Sbjct: 124  LSVLNQSPEAGRTVIGFNQWLISNRNFEHTDETLSYFVDYFGRRKDFKVTHDVIVSSGGV 183

Query: 1223 AGPKTLLSAIDRLVRAGRPNRAVQFFERMERDYGLKRDRDSLKLVVEKLCLNGFASYAEK 1044
            AG K   SAIDRLVRAGRP +AV FFE+ME+DYGLKRD+DSLKLV+EKLC  GFAS AEK
Sbjct: 184  AGAKXFASAIDRLVRAGRPAQAVSFFEKMEKDYGLKRDKDSLKLVIEKLCEKGFASNAEK 243

Query: 1043 MVKDLAKEFFPDEATCDLLITGWCVDGKVDDARRLAGEMYRGGFELGVGAYNAMLDCVCK 864
            MVK LA EFFPD   CDLLI GWCVDGK+++ARRLAGEMYRGGFE+G  AYNA+LDCV K
Sbjct: 244  MVKGLANEFFPDGYMCDLLIKGWCVDGKLEEARRLAGEMYRGGFEIGTTAYNAILDCVSK 303

Query: 863  ICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFNVLVTNLCKMRKTEDALRLFHRMGEWG 684
            +CR KDPF+LHSEV+++LV+MD HGVPRNVETFNVL++NLCK+R+TEDAL LF RMGEWG
Sbjct: 304  LCRKKDPFRLHSEVEEILVDMDTHGVPRNVETFNVLISNLCKIRRTEDALNLFERMGEWG 363

Query: 683  CYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSAGYGASLDKKAYFEFLTILCGIERIDH 504
            CYPNETTF+VLI+SL+QAAR+ EGDEMID+MKSAG+G +L KK  + FL ILCGIE IDH
Sbjct: 364  CYPNETTFLVLIRSLFQAARIGEGDEMIDKMKSAGFGEALIKKECYGFLKILCGIEGIDH 423

Query: 503  ALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVDKANALFNEAQSRGLPVMSKEYAVDPR 324
            AL VF  MK D+CEPG+KTYELLM  L AHNRVD+A ALFNEAQ RG+P+  K Y VDP 
Sbjct: 424  ALRVFKKMKEDKCEPGIKTYELLMGKLYAHNRVDRATALFNEAQKRGVPLTQKAYPVDPY 483

Query: 323  HL-----XXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKRMMARA 180
             L                 KRET PEKMARK+RRLKQI LSFVKKPK+M  RA
Sbjct: 484  FLKKNKELKAAKKGVKKEKKRETFPEKMARKKRRLKQIXLSFVKKPKKMQRRA 536


>ref|XP_010663464.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Vitis vinifera]
            gi|297734081|emb|CBI15328.3| unnamed protein product
            [Vitis vinifera]
          Length = 532

 Score =  658 bits (1698), Expect = 0.0
 Identities = 322/471 (68%), Positives = 391/471 (83%), Gaps = 2/471 (0%)
 Frame = -2

Query: 1598 FAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSELLKDPDSDPLSVSQRLQLSFSHI 1419
            F  PS   +R FSS+P     +  DD   IA +LSSELLKDPDS+P+ + QRLQLSFSHI
Sbjct: 63   FVSPSFPLSRRFSSQP---NNSADDDHSQIAQSLSSELLKDPDSEPVPIIQRLQLSFSHI 119

Query: 1418 TPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHDV 1239
            TP+P L+LQTLN SP+AGRTV+GF++WL+SNPKF H+D+T+S+FVDYFGRRKDFKA H+V
Sbjct: 120  TPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHEV 179

Query: 1238 LAGGG--AGPKTLLSAIDRLVRAGRPNRAVQFFERMERDYGLKRDRDSLKLVVEKLCLNG 1065
            L  G   AG KTL SAIDRLVRAGR  + V FF+RME DYG +RDR+SL +VV KLC +G
Sbjct: 180  LMDGRNFAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSKLCEHG 239

Query: 1064 FASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARRLAGEMYRGGFELGVGAYNA 885
            FAS+AEK+VK++A E FP+E  CDLLI GWCVDGK+D+ARRLA EM+RGGFE+G  AYN+
Sbjct: 240  FASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGTMAYNS 299

Query: 884  MLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFNVLVTNLCKMRKTEDALRLF 705
            +LDC+CK+CR KDPF+L SE +K+LV+MD  GVPRNVETFNVL+TNLCK+RKTEDA++LF
Sbjct: 300  ILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTEDAMKLF 359

Query: 704  HRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSAGYGASLDKKAYFEFLTILC 525
            +RMGEWGCYPNETTF+VL +SLYQAAR+ EGDEMIDRMKSAG+G +LDKKAY+EF+ ILC
Sbjct: 360  YRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAGFGNALDKKAYYEFIKILC 419

Query: 524  GIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVDKANALFNEAQSRGLPVMSK 345
            GIERIDHA+++F+ MK D C+PG+KTY+LLM  L AH R+DKANALF+EA +RG+PV SK
Sbjct: 420  GIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRGVPVESK 479

Query: 344  EYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKRM 192
             Y +DPR +            KRETLPEKMARKRRRL++IRLSFVKKPKRM
Sbjct: 480  AYKLDPRFV--KKPTVAKKEKKRETLPEKMARKRRRLRKIRLSFVKKPKRM 528


>ref|XP_008453300.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Cucumis melo]
          Length = 522

 Score =  657 bits (1696), Expect = 0.0
 Identities = 320/457 (70%), Positives = 376/457 (82%), Gaps = 2/457 (0%)
 Frame = -2

Query: 1544 TTQTGPDDPDPIASALSSELLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAG 1365
            ++++G +D D  + +L+SELLKDPDSDPL ++QRLQLSFSH+ P P LV  TLNLS EAG
Sbjct: 67   SSESGNNDVDQTSQSLASELLKDPDSDPLPITQRLQLSFSHVKPNPELVRNTLNLSSEAG 126

Query: 1364 RTVVGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHDVLAGGGA--GPKTLLSAID 1191
            RTV+GF++WL SNP F HTD+T+SYFVDYFGRRKDF A H+VLA G    GPKTL S+I 
Sbjct: 127  RTVLGFNEWLVSNPDFHHTDETISYFVDYFGRRKDFNAVHEVLAKGLGINGPKTLESSIH 186

Query: 1190 RLVRAGRPNRAVQFFERMERDYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFP 1011
            R  RAGRP + + FFE ME++YGLKRD+ SL++VVEKL  NGF S+AEKMVKDLA EFFP
Sbjct: 187  RFARAGRPTKLISFFETMEKNYGLKRDKKSLRMVVEKLSENGFGSHAEKMVKDLANEFFP 246

Query: 1010 DEATCDLLITGWCVDGKVDDARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLH 831
            DEA CD LI GWCV+ K+D+A+RLAGEMYRGGFELG  AYNA+LDCVCK+CR KDPF+LH
Sbjct: 247  DEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYNALLDCVCKLCRKKDPFRLH 306

Query: 830  SEVDKVLVEMDYHGVPRNVETFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVL 651
            SE +++LVEMD  GVPRNVETFNVL+ NLCK+R+T DA+ LFHRMGEWGC+PN  TF++L
Sbjct: 307  SEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNLFHRMGEWGCHPNAETFLIL 366

Query: 650  IKSLYQAARLEEGDEMIDRMKSAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKAD 471
            I+SLYQAAR  EGDEMIDRMKS GYG +LDKKAY+EF+ ILCGIERIDHAL VFA MK D
Sbjct: 367  IRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMKILCGIERIDHALVVFAKMKKD 426

Query: 470  RCEPGVKTYELLMSNLGAHNRVDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXX 291
             CEPG+KTY+LLM  L AHNR+DKAN+LFNEAQ RG+PV  K Y VDP+++         
Sbjct: 427  GCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTPKAYQVDPKYM--KKPKVKK 484

Query: 290  XXXKRETLPEKMARKRRRLKQIRLSFVKKPKRMMARA 180
               KRETLPEKMARKRRRLKQIRLSFVKKPK+ M RA
Sbjct: 485  VAKKRETLPEKMARKRRRLKQIRLSFVKKPKKGMRRA 521


>ref|XP_012438895.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Gossypium raimondii]
            gi|763783998|gb|KJB51069.1| hypothetical protein
            B456_008G199900 [Gossypium raimondii]
          Length = 507

 Score =  654 bits (1688), Expect = 0.0
 Identities = 325/497 (65%), Positives = 387/497 (77%), Gaps = 8/497 (1%)
 Frame = -2

Query: 1646 HQPSSKPSSHFQFPTLFAPPSLFKTRHFS------SKPVATTQTGPDDPDPIASALSSEL 1485
            H+  S PS  FQ   L +P   F   HF       SKP +T    P  PDP+A +LS+EL
Sbjct: 14   HRCVSSPSP-FQPHALLSPKPQFTPTHFPKLPFVISKPFSTQNPSPQTPDPVALSLSAEL 72

Query: 1484 LKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTD 1305
            LKDP  DPL+++ RLQL FSHI PTP L+ QTLNLSPEAGRTV+GF+ W+ S+P F HTD
Sbjct: 73   LKDPSLDPLAITPRLQLHFSHIKPTPLLISQTLNLSPEAGRTVLGFNDWVLSDPDFNHTD 132

Query: 1304 DTLSYFVDYFGRRKDFKATHDVLAG--GGAGPKTLLSAIDRLVRAGRPNRAVQFFERMER 1131
            +TLS+FVDYFGRRKDFKA HD+L      AGPKTL S+IDRLVRAGRP + + FFERME+
Sbjct: 133  ETLSFFVDYFGRRKDFKAAHDLLVNHKSVAGPKTLNSSIDRLVRAGRPTQVLGFFERMEK 192

Query: 1130 DYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDD 951
            DYG  RD++SLKLVVEKLC NG+ASYAEK+VKD A E FPDE  CDLLI GWCVDGK+++
Sbjct: 193  DYGFNRDKESLKLVVEKLCENGYASYAEKLVKDSANEIFPDEMICDLLIKGWCVDGKLEE 252

Query: 950  ARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVE 771
            ARRLAGEMYRGGFE+G  AYNAMLDCVCK+CR KDPF+LHSE +KVL++MD++GVPRNVE
Sbjct: 253  ARRLAGEMYRGGFEIGTMAYNAMLDCVCKLCREKDPFRLHSEAEKVLLDMDFNGVPRNVE 312

Query: 770  TFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRM 591
            TFN+L+ NLCK+RKTEDA++LF RMGEWGCYPN  +++++I+SLYQAAR+ EGDEMID M
Sbjct: 313  TFNLLLNNLCKIRKTEDAMKLFFRMGEWGCYPNAESYLIMIRSLYQAARIGEGDEMIDGM 372

Query: 590  KSAGYGASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHN 411
            KSAG+G  L KK Y+ FL ILCGIER++HA++VF  MKAD CEPG+KTY+LLM    AHN
Sbjct: 373  KSAGFGDQLGKKEYYGFLKILCGIERVEHAMSVFKKMKADGCEPGIKTYDLLMGKWCAHN 432

Query: 410  RVDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLK 231
            R+D+ANAL+NEA   G+PV  K Y VDPR++            KRET  EKMARKRRRLK
Sbjct: 433  RLDRANALYNEALKNGVPVEPKPYRVDPRYM--KKTKAVKKEKKRETFSEKMARKRRRLK 490

Query: 230  QIRLSFVKKPKRMMARA 180
            QIRLSFVKK K  M  A
Sbjct: 491  QIRLSFVKKSKGRMRSA 507


>ref|XP_004138218.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Cucumis sativus]
          Length = 522

 Score =  649 bits (1673), Expect = 0.0
 Identities = 323/476 (67%), Positives = 378/476 (79%), Gaps = 3/476 (0%)
 Frame = -2

Query: 1598 FAPPSLFKTRH-FSSKPVATTQTGPDDPDPIASALSSELLKDPDSDPLSVSQRLQLSFSH 1422
            F+ P      H FSS+ V       +  D  + +L+SELLKDPDSDPL ++QRLQLSFSH
Sbjct: 54   FSSPLYLSLSHSFSSESVN------NHVDQTSQSLASELLKDPDSDPLPITQRLQLSFSH 107

Query: 1421 ITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHD 1242
            + P P LV  TLNLS EAGRTV+GF++WL SNP F HTD+T+SYFVD+FGRRKDF A  +
Sbjct: 108  VKPNPELVRNTLNLSSEAGRTVLGFNEWLVSNPDFHHTDETISYFVDFFGRRKDFNAVQE 167

Query: 1241 VLAGGGA--GPKTLLSAIDRLVRAGRPNRAVQFFERMERDYGLKRDRDSLKLVVEKLCLN 1068
            VLA G    GPKTL S+I R  RAGRP + + FFE ME +YGLKRD++SL++VVEKLC N
Sbjct: 168  VLAKGLGINGPKTLKSSIHRFARAGRPTKLISFFETMETNYGLKRDKESLRMVVEKLCEN 227

Query: 1067 GFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARRLAGEMYRGGFELGVGAYN 888
            GF S+AEKMVKDLA EFFPDEA CD LI GWCV+ K+D+A+RLAGEMYRGGFELG  AYN
Sbjct: 228  GFGSHAEKMVKDLANEFFPDEAICDTLIKGWCVNEKLDEAKRLAGEMYRGGFELGTTAYN 287

Query: 887  AMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFNVLVTNLCKMRKTEDALRL 708
            A+LDCVCK+CR KDPF+L SE +++LVEMD  GVPRNVETFNVL+ NLCK+R+T DA+ L
Sbjct: 288  ALLDCVCKLCRKKDPFRLDSEAEEILVEMDCRGVPRNVETFNVLINNLCKIRRTTDAVNL 347

Query: 707  FHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSAGYGASLDKKAYFEFLTIL 528
            FHRMGEWGC+PN  TF++LI+SLYQAAR  EGDEMIDRMKS GYG +LDKKAY+EF+ IL
Sbjct: 348  FHRMGEWGCHPNAETFLILIRSLYQAARTGEGDEMIDRMKSVGYGDALDKKAYYEFMNIL 407

Query: 527  CGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVDKANALFNEAQSRGLPVMS 348
            CGIERIDHAL VFA MK D CEPG+KTY+LLM  L AHNR+DKAN+LFNEAQ RG+PV  
Sbjct: 408  CGIERIDHALVVFAKMKKDGCEPGIKTYDLLMGKLCAHNRLDKANSLFNEAQKRGVPVTP 467

Query: 347  KEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKRMMARA 180
            K Y VDP+++            KRETLPEKMARKRRRLKQIRLSFVKKP+R M RA
Sbjct: 468  KAYQVDPKYV--KKPKDKKVAKKRETLPEKMARKRRRLKQIRLSFVKKPRRGMRRA 521


>ref|XP_012080409.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial [Jatropha curcas]
            gi|643721107|gb|KDP31371.1| hypothetical protein
            JCGZ_11747 [Jatropha curcas]
          Length = 516

 Score =  647 bits (1668), Expect = 0.0
 Identities = 329/485 (67%), Positives = 391/485 (80%), Gaps = 8/485 (1%)
 Frame = -2

Query: 1610 FPTLFAPPSL--FKTRHFS-SKPVATTQTGPD-DPDPIASALSSELLKDPDSDPLSVSQR 1443
            F + FAP +L  F    FS  KP ++    P+ DPDPIA +LS+EL+K PD+D L++SQR
Sbjct: 32   FSSHFAPTNLHKFPLLPFSLCKPFSSQTLKPNNDPDPIAQSLSAELVKSPDTDSLAISQR 91

Query: 1442 LQLSFSHITP--TPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDTLSYFVDYFGR 1269
            L L+FSHI    TP+LVLQTLNLSPEAGRTV+GFHQWL +   F HTD+T+S+FVDYFGR
Sbjct: 92   LNLNFSHIANSITPSLVLQTLNLSPEAGRTVLGFHQWLVTAACFKHTDETISFFVDYFGR 151

Query: 1268 RKDFKATHDVLAGGGA--GPKTLLSAIDRLVRAGRPNRAVQFFERMERDYGLKRDRDSLK 1095
            RKDF++TH++L  G +  G K+L S +DRL+ AGRP + V FF+RME+DYG KRDR+SL 
Sbjct: 152  RKDFQSTHELLLYGKSVIGSKSLESVVDRLIWAGRPTKVVGFFDRMEKDYGFKRDRESLT 211

Query: 1094 LVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARRLAGEMYRGG 915
            L+V+KLC NG+ASYAEKMVK LA E FPDE  CDLLI GWCVDGK+++A+RLAGEMYRGG
Sbjct: 212  LIVKKLCDNGYASYAEKMVKSLANEIFPDEIICDLLIKGWCVDGKLEEAKRLAGEMYRGG 271

Query: 914  FELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFNVLVTNLCKM 735
            FE+G  AYNA+LDCVCKICRLK+PF+LHSE +KVLVEMD  GVPRNVETFNVL+ NLCK+
Sbjct: 272  FEIGPIAYNAILDCVCKICRLKEPFRLHSEAEKVLVEMDTRGVPRNVETFNVLINNLCKI 331

Query: 734  RKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSAGYGASLDKK 555
            RKT+DAL LF+RM EWGC P++TTF+VLI+SLYQAAR+ EGDEMIDRMKSAGYG  LDKK
Sbjct: 332  RKTQDALNLFYRMREWGCDPDDTTFLVLIRSLYQAARIGEGDEMIDRMKSAGYGDKLDKK 391

Query: 554  AYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVDKANALFNEA 375
            AY+ FL ILCGIER++HA++VF MMKAD C+PG+KTY+LLM    AHNR+DKANALFNEA
Sbjct: 392  AYYSFLKILCGIERLEHAMSVFEMMKADGCKPGIKTYDLLMGKWCAHNRLDKANALFNEA 451

Query: 374  QSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKR 195
             S G+ V  KEY V+ R L            KRETLPEK ARKRRRLKQIRLSFVKKPK 
Sbjct: 452  LSNGVTVTPKEYRVEARFL-KKPEAAAKKGKKRETLPEKTARKRRRLKQIRLSFVKKPKN 510

Query: 194  MMARA 180
            MM RA
Sbjct: 511  MMRRA 515


>ref|XP_007037613.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
            cacao] gi|508774858|gb|EOY22114.1| Pentatricopeptide
            repeat-containing protein, putative [Theobroma cacao]
          Length = 494

 Score =  640 bits (1652), Expect = 0.0
 Identities = 309/459 (67%), Positives = 374/459 (81%), Gaps = 2/459 (0%)
 Frame = -2

Query: 1559 SKPVATTQTGPDDPDPIASALSSELLKDPDSDPLSVSQRLQLSFSHITPTPNLVLQTLNL 1380
            SKP +T       PDPIA +LS+E+LK+PD DPL ++QRLQLSFSHI PT  L+ QTLNL
Sbjct: 40   SKPFST-----QSPDPIAQSLSTEILKNPDLDPLPITQRLQLSFSHIKPTSLLISQTLNL 94

Query: 1379 SPEAGRTVVGFHQWLASNPKFTHTDDTLSYFVDYFGRRKDFKATHDVLAGGG--AGPKTL 1206
            SPEAGRTV+GF+ WL S+P F HTD+TLS+F+DYFGRRKDFKA HD+L      AGPKT 
Sbjct: 95   SPEAGRTVLGFNDWLLSDPNFNHTDETLSFFIDYFGRRKDFKAAHDLLVNNKSVAGPKTF 154

Query: 1205 LSAIDRLVRAGRPNRAVQFFERMERDYGLKRDRDSLKLVVEKLCLNGFASYAEKMVKDLA 1026
             S++DRLVRAGRP + + FFE M +DYG KRD++SL+L+VEKLC NG+ASYAEKMVK+ A
Sbjct: 155  ESSVDRLVRAGRPAQVLGFFEGMGKDYGFKRDKESLRLIVEKLCENGYASYAEKMVKNSA 214

Query: 1025 KEFFPDEATCDLLITGWCVDGKVDDARRLAGEMYRGGFELGVGAYNAMLDCVCKICRLKD 846
             E FPDE  CDLLI GWCVDGK+++A+RLAGEMYRGGFE+G  AYNAMLDCVCK+CR KD
Sbjct: 215  NEIFPDEMICDLLIKGWCVDGKLEEAKRLAGEMYRGGFEIGTMAYNAMLDCVCKLCRKKD 274

Query: 845  PFQLHSEVDKVLVEMDYHGVPRNVETFNVLVTNLCKMRKTEDALRLFHRMGEWGCYPNET 666
            PF+LHSE +KVL++MD +GVPRNVETFNVL+ NLCK+RKTEDA++LF+RMGEWGCYP+  
Sbjct: 275  PFRLHSEAEKVLLDMDIYGVPRNVETFNVLMNNLCKIRKTEDAMKLFYRMGEWGCYPDAE 334

Query: 665  TFVVLIKSLYQAARLEEGDEMIDRMKSAGYGASLDKKAYFEFLTILCGIERIDHALTVFA 486
            ++++LI+SLYQAAR+ EGDEMIDRMKSAG+G  L +K Y+ FL ILCG+ER++HA+ VF 
Sbjct: 335  SYLILIRSLYQAARVAEGDEMIDRMKSAGFGDKLGEKEYYSFLKILCGVERVEHAIIVFK 394

Query: 485  MMKADRCEPGVKTYELLMSNLGAHNRVDKANALFNEAQSRGLPVMSKEYAVDPRHLXXXX 306
             MKAD C+PG+KTY+LLM     HNR+D+ANAL+NEA   G+PV  K Y VDPR++    
Sbjct: 395  KMKADGCKPGIKTYDLLMGKWCGHNRLDRANALYNEAVENGVPVEPKPYRVDPRYM--KK 452

Query: 305  XXXXXXXXKRETLPEKMARKRRRLKQIRLSFVKKPKRMM 189
                    KRETLPEKMARKRRRLKQIRLSFVKKPKR M
Sbjct: 453  TKAVKEEKKRETLPEKMARKRRRLKQIRLSFVKKPKRTM 491


>ref|XP_004301536.1| PREDICTED: pentatricopeptide repeat-containing protein PNM1,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 517

 Score =  639 bits (1648), Expect = e-180
 Identities = 323/491 (65%), Positives = 381/491 (77%), Gaps = 2/491 (0%)
 Frame = -2

Query: 1646 HQPSSKPSSHFQFPTLFAPPSLFKTRHFSSKPVATTQTGPDDPDPIASALSSELLKDPDS 1467
            H P+   +SHF        PSL +    +SKP +++ + P     +A ++SS LL  P  
Sbjct: 42   HAPNPITTSHF--------PSLPRFS-LTSKPFSSSSSEPQ----LAQSISSHLLHQPQP 88

Query: 1466 DPLSVSQRLQLSFSHITPTPNLVLQTLNLSPEAGRTVVGFHQWLASNPKFTHTDDTLSYF 1287
            +   V++ LQ SF ++TPTP+LVL  LNLS EAGR V+GF+QWL  NP+F HTD+TLSYF
Sbjct: 89   ECADVTKTLQSSFPNVTPTPSLVLSVLNLSAEAGRAVLGFNQWLIHNPRFDHTDETLSYF 148

Query: 1286 VDYFGRRKDFKATHDVLAGGG--AGPKTLLSAIDRLVRAGRPNRAVQFFERMERDYGLKR 1113
            VDYFGRRKDFKATHDV+      AGPKTL ++IDRLVRAGRP +AV  FE+ME +YG+KR
Sbjct: 149  VDYFGRRKDFKATHDVILSSRDVAGPKTLAASIDRLVRAGRPAQAVSMFEKMEEEYGIKR 208

Query: 1112 DRDSLKLVVEKLCLNGFASYAEKMVKDLAKEFFPDEATCDLLITGWCVDGKVDDARRLAG 933
            D+ +L+LVVEKLC  GFAS AEKMVK L  EFFPDE  CDLLI GWCVDGK+D+ARRLAG
Sbjct: 209  DKAALRLVVEKLCEYGFASNAEKMVKGLVNEFFPDEYMCDLLIKGWCVDGKLDEARRLAG 268

Query: 932  EMYRGGFELGVGAYNAMLDCVCKICRLKDPFQLHSEVDKVLVEMDYHGVPRNVETFNVLV 753
            EMYRGGFE+G  A+NA+LDCVCK+CR KDPF+LHSE +++LV+MDYHGVPRNVETFNVL+
Sbjct: 269  EMYRGGFEIGTSAFNAILDCVCKLCRKKDPFRLHSEAEQILVDMDYHGVPRNVETFNVLI 328

Query: 752  TNLCKMRKTEDALRLFHRMGEWGCYPNETTFVVLIKSLYQAARLEEGDEMIDRMKSAGYG 573
            TNLCK+RKT DAL LFHRMGEWGC PNETTF+ L +SLYQAAR+ EGDEMIDRMKSAG+G
Sbjct: 329  TNLCKIRKTNDALNLFHRMGEWGCSPNETTFLELTRSLYQAARVGEGDEMIDRMKSAGFG 388

Query: 572  ASLDKKAYFEFLTILCGIERIDHALTVFAMMKADRCEPGVKTYELLMSNLGAHNRVDKAN 393
             +LDKKAYF FL ILCGIERIDHAL+VF  MK D CEPG+KTY+LLM  L A NR D+A 
Sbjct: 389  EALDKKAYFGFLKILCGIERIDHALSVFKKMKQDGCEPGIKTYDLLMGKLYAQNRADRAT 448

Query: 392  ALFNEAQSRGLPVMSKEYAVDPRHLXXXXXXXXXXXXKRETLPEKMARKRRRLKQIRLSF 213
            ALFNEAQ + +PV  K Y VD ++L             RETLPEKMARKRRRLKQIRLSF
Sbjct: 449  ALFNEAQKKEVPVTHKTYQVDSKYL---KKPKAKKENTRETLPEKMARKRRRLKQIRLSF 505

Query: 212  VKKPKRMMARA 180
            VKKPK+ M RA
Sbjct: 506  VKKPKKGMRRA 516