BLASTX nr result

ID: Wisteria21_contig00005881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Wisteria21_contig00005881
         (247 letters)

Database: ./nr 
           77,306,371 sequences; 28,104,191,420 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004497514.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    78   3e-12
gb|ACJ85252.1| unknown [Medicago truncatula]                           58   3e-06
ref|XP_003590481.1| RNA-binding (RRM/RBD/RNP motif) family prote...    58   3e-06
ref|XP_014514950.1| PREDICTED: 29 kDa ribonucleoprotein A, chlor...    57   7e-06

>ref|XP_004497514.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Cicer
           arietinum]
          Length = 284

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 43/65 (66%), Positives = 49/65 (75%)
 Frame = -1

Query: 196 MSTTAASLALPTLRTGKLLCYPQCFXXXXXXXXXXNFKPITISLASLRPTLSLSSRFVSR 17
           MS++AASLALPTLRT + LC PQCF          NFKP +IS AS+RPTLSLS RFVSR
Sbjct: 1   MSSSAASLALPTLRTKQPLCSPQCFSSHPSFSINPNFKPFSISSASVRPTLSLSYRFVSR 60

Query: 16  VALSS 2
           VA+SS
Sbjct: 61  VAVSS 65


>gb|ACJ85252.1| unknown [Medicago truncatula]
          Length = 280

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = -1

Query: 196 MSTTAASLALPTLRTGKLLCYPQCFXXXXXXXXXXNFKPITISLASLRPTLSLSSRFVSR 17
           MST+A SL LP+L T      PQCF          NFKP + S  SLRP+LS+S RF+SR
Sbjct: 1   MSTSATSLVLPSLFTKNS---PQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFISR 57

Query: 16  VALSS 2
           VA+SS
Sbjct: 58  VAVSS 62


>ref|XP_003590481.1| RNA-binding (RRM/RBD/RNP motif) family protein [Medicago
           truncatula] gi|355479529|gb|AES60732.1| RNA-binding
           (RRM/RBD/RNP motif) family protein [Medicago truncatula]
           gi|388503166|gb|AFK39649.1| unknown [Medicago
           truncatula]
          Length = 280

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 34/65 (52%), Positives = 41/65 (63%)
 Frame = -1

Query: 196 MSTTAASLALPTLRTGKLLCYPQCFXXXXXXXXXXNFKPITISLASLRPTLSLSSRFVSR 17
           MST+A SL LP+L T      PQCF          NFKP + S  SLRP+LS+S RF+SR
Sbjct: 1   MSTSATSLVLPSLFTKNS---PQCFSSLPSLSLNPNFKPFSFSSVSLRPSLSISHRFISR 57

Query: 16  VALSS 2
           VA+SS
Sbjct: 58  VAVSS 62


>ref|XP_014514950.1| PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic-like [Vigna
           radiata var. radiata]
          Length = 277

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 37/67 (55%), Positives = 42/67 (62%), Gaps = 2/67 (2%)
 Frame = -1

Query: 196 MSTTAASLALPTL--RTGKLLCYPQCFXXXXXXXXXXNFKPITISLASLRPTLSLSSRFV 23
           MST+A SLALPTL  RT   L  P+CF            KPI+IS   L+PT SLSSRF+
Sbjct: 1   MSTSATSLALPTLTLRTQHPLSSPKCFSSSLSLTPNA--KPISISTVFLKPTFSLSSRFL 58

Query: 22  SRVALSS 2
            RVALSS
Sbjct: 59  PRVALSS 65


Top