BLASTX nr result
ID: Stemona21_contig00043624
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00043624
(427 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citr... 88 1e-15
ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containi... 87 3e-15
gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus pe... 86 4e-15
ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containi... 84 2e-14
gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus... 84 3e-14
gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis] 79 6e-13
ref|XP_002316137.1| pentatricopeptide repeat-containing family p... 78 1e-12
ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containi... 78 1e-12
gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protei... 77 2e-12
ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutr... 77 3e-12
ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containi... 75 1e-11
ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Caps... 73 4e-11
ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containi... 70 3e-10
ref|XP_003613787.1| Pentatricopeptide repeat-containing protein ... 70 3e-10
ref|XP_002875182.1| pentatricopeptide repeat-containing protein ... 70 4e-10
ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]... 65 7e-09
gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thali... 65 7e-09
gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japo... 61 2e-07
>ref|XP_006438696.1| hypothetical protein CICLE_v10031011mg [Citrus clementina]
gi|568859243|ref|XP_006483151.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Citrus sinensis]
gi|557540892|gb|ESR51936.1| hypothetical protein
CICLE_v10031011mg [Citrus clementina]
Length = 598
Score = 87.8 bits (216), Expect = 1e-15
Identities = 46/84 (54%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Frame = +3
Query: 177 TATVTGTAIDPR-RRFRELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAH 353
T T ++ PR FR L+Q+HA IK+H D + +LTKLI C +PT S+M +AH
Sbjct: 19 TNTPNALSLLPRCTSFRGLKQIHAVTIKTHLQNDLN--VLTKLINFCTQNPTTSSMEHAH 76
Query: 354 LLFDQIPQPDVVLFNTMARGYARS 425
LLFD+IP+PD+VLFNTMARGY+RS
Sbjct: 77 LLFDRIPEPDIVLFNTMARGYSRS 100
>ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
[Vitis vinifera] gi|296086362|emb|CBI31951.3| unnamed
protein product [Vitis vinifera]
Length = 595
Score = 86.7 bits (213), Expect = 3e-15
Identities = 44/68 (64%), Positives = 54/68 (79%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL+QL A AIK+H D S +LTK I C+L+PT ++M +AH LFDQIPQPD+VLFNT
Sbjct: 34 RELKQLQAFAIKTHLHSDLS--VLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNT 91
Query: 402 MARGYARS 425
MARGYAR+
Sbjct: 92 MARGYART 99
>gb|EMJ28099.1| hypothetical protein PRUPE_ppa016366mg [Prunus persica]
Length = 593
Score = 86.3 bits (212), Expect = 4e-15
Identities = 47/85 (55%), Positives = 61/85 (71%), Gaps = 1/85 (1%)
Frame = +3
Query: 174 RTATVTGTAIDPR-RRFRELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYA 350
+T T T ++ P+ REL+Q+ A +IK+H D S +LTKLI C L+PT ++M YA
Sbjct: 15 KTNTNTPVSLIPKCTSLRELKQIQAFSIKTHLQYDIS--VLTKLINFCTLNPTGTSMDYA 72
Query: 351 HLLFDQIPQPDVVLFNTMARGYARS 425
H LFDQIP PD+V+FNTMARGYARS
Sbjct: 73 HHLFDQIPHPDIVVFNTMARGYARS 97
>ref|XP_004298429.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Fragaria vesca subsp. vesca]
Length = 593
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/92 (48%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Frame = +3
Query: 153 LTLLSSIRTATVTGTAIDPR-RRFRELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPT 329
+T +S + T + ++ P+ +LQQ+ A +IK+H D S +L+KLI SC L+PT
Sbjct: 8 MTPISHPKAHTQSRISLIPKCTSLTQLQQIQAFSIKTHLQYDLS--VLSKLINSCTLNPT 65
Query: 330 PSTMAYAHLLFDQIPQPDVVLFNTMARGYARS 425
++M YAH LFDQIP PD+V+FNTMARGY+RS
Sbjct: 66 ATSMDYAHQLFDQIPHPDIVVFNTMARGYSRS 97
>gb|ESW29612.1| hypothetical protein PHAVU_002G084700g [Phaseolus vulgaris]
Length = 600
Score = 83.6 bits (205), Expect = 3e-14
Identities = 41/67 (61%), Positives = 50/67 (74%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL+Q+ A IK+H S +LTKLI C +PT ++M YAH +FDQIPQPD+VLFNT
Sbjct: 39 RELKQIQAYTIKTH--LHNSGTVLTKLINFCTCNPTTASMDYAHQMFDQIPQPDIVLFNT 96
Query: 402 MARGYAR 422
MARGYAR
Sbjct: 97 MARGYAR 103
>gb|EXB69694.1| hypothetical protein L484_002149 [Morus notabilis]
Length = 594
Score = 79.0 bits (193), Expect = 6e-13
Identities = 40/67 (59%), Positives = 49/67 (73%)
Frame = +3
Query: 225 ELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNTM 404
EL+Q+ A +IK+H D S ++ KLI C L PTP M +A LFDQIPQPDV++FNTM
Sbjct: 35 ELKQIQAFSIKTHLQNDIS--VVAKLINFCTLSPTPGFMGHAQHLFDQIPQPDVIVFNTM 92
Query: 405 ARGYARS 425
ARGYARS
Sbjct: 93 ARGYARS 99
>ref|XP_002316137.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222865177|gb|EEF02308.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 601
Score = 78.2 bits (191), Expect = 1e-12
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
+EL+Q+ A +IK+H D +LTKLI SC +PT ++M YAH LF+ IPQPD+VLFN+
Sbjct: 40 KELKQIQAFSIKTHLQNDLQ--ILTKLINSCTQNPTTASMDYAHQLFEAIPQPDIVLFNS 97
Query: 402 MARGYARS 425
M RGY+RS
Sbjct: 98 MFRGYSRS 105
>ref|XP_003517982.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Glycine max]
Length = 609
Score = 77.8 bits (190), Expect = 1e-12
Identities = 38/67 (56%), Positives = 50/67 (74%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL+Q+ A IK+H + +LTKLI C +PT ++M +AH +FD+IPQPD+VLFNT
Sbjct: 49 RELKQIQAYTIKTH---QNNPTVLTKLINFCTSNPTIASMDHAHRMFDKIPQPDIVLFNT 105
Query: 402 MARGYAR 422
MARGYAR
Sbjct: 106 MARGYAR 112
>gb|EOY01914.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 604
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/68 (55%), Positives = 51/68 (75%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
RE++Q+ A AIK+H D + LTKLI C +PT ++M YAH +FD++ QPD+VLFNT
Sbjct: 43 REVKQIQAFAIKTHLQNDIT--FLTKLINFCTKNPTFTSMEYAHKVFDKVSQPDIVLFNT 100
Query: 402 MARGYARS 425
MARGY+RS
Sbjct: 101 MARGYSRS 108
>ref|XP_006395744.1| hypothetical protein EUTSA_v10003852mg [Eutrema salsugineum]
gi|557092383|gb|ESQ33030.1| hypothetical protein
EUTSA_v10003852mg [Eutrema salsugineum]
Length = 605
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL Q+ AIKSH +D S +TKLI C +PT S+M+YA LFD +P+PD+V+FN+
Sbjct: 43 RELMQIQGYAIKSHLHEDVS--FITKLINFCTEYPTTSSMSYARQLFDAMPEPDIVVFNS 100
Query: 402 MARGYARS 425
MARGY+RS
Sbjct: 101 MARGYSRS 108
>ref|XP_004239112.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Solanum lycopersicum]
Length = 605
Score = 74.7 bits (182), Expect = 1e-11
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Frame = +3
Query: 189 TGTAIDPR------RRFRELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYA 350
T T IDP + R+L+Q+ A +IK+ D ++KLI C +PTP+ M +A
Sbjct: 27 TFTPIDPLALVPKCKSLRDLKQIQAFSIKTQLQNDIF--FMSKLINFCTKNPTPACMYHA 84
Query: 351 HLLFDQIPQPDVVLFNTMARGYARS 425
HLLFD+IPQPD+VLFN +ARGYA S
Sbjct: 85 HLLFDKIPQPDIVLFNFLARGYAHS 109
>ref|XP_006348757.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Solanum tuberosum]
Length = 605
Score = 72.8 bits (177), Expect = 4e-11
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 6/85 (7%)
Frame = +3
Query: 189 TGTAIDPR------RRFRELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYA 350
T T IDP + R+L+Q+ A +IK+ D ++KLI C +PTP+ M +A
Sbjct: 27 TFTPIDPLALVPKCKSLRDLKQIQAFSIKTQMQNDIF--FMSKLINFCTKNPTPAFMYHA 84
Query: 351 HLLFDQIPQPDVVLFNTMARGYARS 425
HLLFD+IPQP++VLFN +A GYARS
Sbjct: 85 HLLFDKIPQPNIVLFNFLAHGYARS 109
>ref|XP_006290747.1| hypothetical protein CARUB_v10016843mg [Capsella rubella]
gi|482559454|gb|EOA23645.1| hypothetical protein
CARUB_v10016843mg [Capsella rubella]
Length = 630
Score = 72.8 bits (177), Expect = 4e-11
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3
Query: 213 RRFRELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVL 392
+ REL Q+ AIKSH +D S +TKLI C PT S+M+YA LFD + +PD+V+
Sbjct: 66 KSLRELMQIQGYAIKSHLHEDVS--FITKLINFCTESPTESSMSYARHLFDAMSEPDIVI 123
Query: 393 FNTMARGYARS 425
FN+MARGY+RS
Sbjct: 124 FNSMARGYSRS 134
>ref|XP_004490064.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cicer arietinum]
Length = 602
Score = 71.2 bits (173), Expect = 1e-10
Identities = 35/67 (52%), Positives = 47/67 (70%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
+EL+Q+ A IK+H + + +TKLI C PT ++M YAH LFD+I PD+VLFN+
Sbjct: 41 KELKQIQAYTIKTH--QHNNTNFITKLINFCTSKPTTASMDYAHQLFDKITLPDIVLFNS 98
Query: 402 MARGYAR 422
MARGYAR
Sbjct: 99 MARGYAR 105
>ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
gi|449478665|ref|XP_004155385.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g02980-like [Cucumis sativus]
Length = 604
Score = 70.1 bits (170), Expect = 3e-10
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +3
Query: 225 ELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNTM 404
EL+Q+ A IK++ D S +LTKLI C L+PT S M +AH LFDQI D++LFN M
Sbjct: 44 ELKQIQAYTIKTNLQSDIS--VLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIM 101
Query: 405 ARGYARS 425
ARGYARS
Sbjct: 102 ARGYARS 108
>ref|XP_003613787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355515122|gb|AES96745.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 586
Score = 70.1 bits (170), Expect = 3e-10
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
+EL+Q+ A IK++ + + ++TK I C +PT ++M +AH LFDQI QP++VLFNT
Sbjct: 40 KELKQIQAYTIKTNYQNNTN--VITKFINFCTSNPTKASMEHAHQLFDQITQPNIVLFNT 97
Query: 402 MARGYAR 422
MARGYAR
Sbjct: 98 MARGYAR 104
>ref|XP_002875182.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297321020|gb|EFH51441.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 605
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/68 (52%), Positives = 47/68 (69%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL Q+ A AIKSH + N TKLI C PT S+M+YA LFD + +PD+V+FN+
Sbjct: 45 RELMQIQAYAIKSHQEDVSFN---TKLINFCTESPTESSMSYARHLFDAMSEPDIVIFNS 101
Query: 402 MARGYARS 425
+ARGY+RS
Sbjct: 102 IARGYSRS 109
>ref|NP_178398.1| RNA editing factor OTP85 [Arabidopsis thaliana]
gi|218546779|sp|Q8LK93.2|PP145_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g02980 gi|3461822|gb|AAC32916.1| hypothetical protein
[Arabidopsis thaliana] gi|330250557|gb|AEC05651.1| RNA
editing factor OTP85 [Arabidopsis thaliana]
Length = 603
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL Q+ A AIKSH + + + KLI C PT S+M+YA LF+ + +PD+V+FN+
Sbjct: 43 RELMQIQAYAIKSHIE---DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNS 99
Query: 402 MARGYAR 422
MARGY+R
Sbjct: 100 MARGYSR 106
>gb|AAM77644.1|AF517844_1 hypothetical protein [Arabidopsis thaliana]
Length = 603
Score = 65.5 bits (158), Expect = 7e-09
Identities = 33/67 (49%), Positives = 46/67 (68%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALHPTPSTMAYAHLLFDQIPQPDVVLFNT 401
REL Q+ A AIKSH + + + KLI C PT S+M+YA LF+ + +PD+V+FN+
Sbjct: 43 RELMQIQAYAIKSHIE---DVSFVAKLINFCTESPTESSMSYARHLFEAMSEPDIVIFNS 99
Query: 402 MARGYAR 422
MARGY+R
Sbjct: 100 MARGYSR 106
>gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
Length = 611
Score = 60.8 bits (146), Expect = 2e-07
Identities = 33/70 (47%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Frame = +3
Query: 222 RELQQLHAAAIKSHGDKDRSNALLTKLITSCALH--PTPSTMAYAHLLFDQIPQP-DVVL 392
R L QLHA A+K+ G A +T+L+T C P+ +AYA +FD+IP P DVV
Sbjct: 42 RALAQLHAVAVKAGGGLQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVW 101
Query: 393 FNTMARGYAR 422
+NT+ RGYAR
Sbjct: 102 YNTLLRGYAR 111