BLASTX nr result
ID: Stemona21_contig00043622
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00043622
(359 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEX94844.1| RNA polymerase beta' subunit (chloroplast) [Xeron... 75 1e-11
gb|AHA12745.1| RNA polymerase beta' subunit [Canna indica] 72 6e-11
gb|AHH24323.1| RNA polymerase beta' subunit (chloroplast) [Japon... 71 1e-10
gb|AEX94821.1| RNA polymerase beta' subunit (chloroplast) [Dorya... 71 1e-10
gb|AEZ01417.1| RNA polymerase beta' subunit (chloroplast) [Japon... 70 2e-10
gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amary... 70 2e-10
gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chiono... 70 3e-10
gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sanse... 69 5e-10
gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinu... 69 5e-10
ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia coll... 68 1e-09
ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spect... 67 2e-09
gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucha... 67 2e-09
gb|AFM83283.1| RNA polymerase beta' subunit (chloroplast) [Kingi... 67 2e-09
gb|AEZ49489.1| RNA polymerase beta'' subunit, partial [Neoasteli... 67 2e-09
gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanth... 67 2e-09
gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziro... 67 2e-09
gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii] 67 3e-09
gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscu... 67 3e-09
gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimi... 67 3e-09
gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Erios... 66 4e-09
>gb|AEX94844.1| RNA polymerase beta' subunit (chloroplast) [Xeronema callistemon]
Length = 1382
Score = 74.7 bits (182), Expect = 1e-11
Identities = 37/65 (56%), Positives = 46/65 (70%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC +PNNF++IP++S
Sbjct: 1318 VGTGFKKLVHRSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCVPNNFHEIPEKSFT 1377
Query: 81 RFNDS 67
RF++S
Sbjct: 1378 RFHNS 1382
>gb|AHA12745.1| RNA polymerase beta' subunit [Canna indica]
Length = 1371
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/65 (53%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*KT---NTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FKNLVH SRQDKNI + N E+R+ILLHHRE+FC ++PN+F++ +QS
Sbjct: 1307 VGTGFKNLVHRSRQDKNIYLEIKGKNLFDLEIRDILLHHRELFCSYVPNSFHETSEQSFT 1366
Query: 81 RFNDS 67
RF+DS
Sbjct: 1367 RFHDS 1371
>gb|AHH24323.1| RNA polymerase beta' subunit (chloroplast) [Japonolirion osense]
Length = 1374
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G F LVH SRQDKNI K N EMR+IL HHRE+FC IPNNF++ +QS
Sbjct: 1310 VGTGFTKLVHRSRQDKNIHLEIKKKNLFEVEMRDILFHHRELFCSCIPNNFHEPSEQSFT 1369
Query: 81 RFNDS 67
RFNDS
Sbjct: 1370 RFNDS 1374
>gb|AEX94821.1| RNA polymerase beta' subunit (chloroplast) [Doryanthes palmeri]
Length = 1386
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/67 (53%), Positives = 45/67 (67%), Gaps = 5/67 (7%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*-----KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQS 88
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC PNNF++IP+++
Sbjct: 1320 VGTGFKKLVHRSRQDKNIHLDLEIKKKNLFELEMRDILLHHREFFCSCAPNNFHEIPEKA 1379
Query: 87 SKRFNDS 67
RF++S
Sbjct: 1380 FTRFHNS 1386
>gb|AEZ01417.1| RNA polymerase beta' subunit (chloroplast) [Japonolirion osense]
Length = 1378
Score = 70.5 bits (171), Expect = 2e-10
Identities = 37/65 (56%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G F LVH SRQDKNI K N EMR+IL HHRE+FC IPNNF++ +QS
Sbjct: 1314 VGTGFIKLVHRSRQDKNIHLEIKKKNLFEVEMRDILFHHRELFCSCIPNNFHEPSEQSFT 1373
Query: 81 RFNDS 67
RFNDS
Sbjct: 1374 RFNDS 1378
>gb|AEX94810.1| RNA polymerase beta' subunit (chloroplast) [Amaryllis belladonna]
Length = 1387
Score = 70.5 bits (171), Expect = 2e-10
Identities = 36/65 (55%), Positives = 43/65 (66%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC PNNF+ P++S
Sbjct: 1323 VGTGFKKLVHRSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCAPNNFHDTPEKSFT 1382
Query: 81 RFNDS 67
RF++S
Sbjct: 1383 RFHNS 1387
>gb|AHI87517.1| RNA polymerase beta subunit (chloroplast) [Chionographis japonica]
Length = 1382
Score = 70.1 bits (170), Expect = 3e-10
Identities = 36/65 (55%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH+SRQDKNI + N EMR+ILLHHRE+FC NNF++ +QS
Sbjct: 1318 VGTGFKKLVHNSRQDKNIYLEIKRKNLFELEMRDILLHHRELFCSCAQNNFHETSEQSFT 1377
Query: 81 RFNDS 67
RFNDS
Sbjct: 1378 RFNDS 1382
>gb|AEX94835.1| RNA polymerase beta' subunit (chloroplast) [Sansevieria trifasciata]
Length = 1384
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC P NFY P++S K
Sbjct: 1320 VGTGFKKLVHPSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCAPRNFYDTPEKSFK 1379
Query: 81 RFNDS 67
R ++S
Sbjct: 1380 RIHNS 1384
>gb|AEX94811.1| RNA polymerase beta' subunit (chloroplast) [Crinum asiaticum]
Length = 1387
Score = 69.3 bits (168), Expect = 5e-10
Identities = 36/65 (55%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC PNNF+ P++S
Sbjct: 1323 VGTGFKKLVHRSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCAPNNFHDTPEKSFT 1382
Query: 81 RFNDS 67
RF +S
Sbjct: 1383 RFPNS 1387
>ref|YP_007475609.1| RNA polymerase beta' subunit [Heliconia collinsiana]
gi|449326088|gb|AGE92674.1| RNA polymerase beta' subunit
[Heliconia collinsiana]
Length = 1384
Score = 67.8 bits (164), Expect = 1e-09
Identities = 36/70 (51%), Positives = 46/70 (65%), Gaps = 8/70 (11%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPN-----NFYKIP 97
+G FK LVH SRQDKNI + N EMR+ILLHHRE+FC ++PN NF++
Sbjct: 1315 VGTGFKKLVHRSRQDKNIYLEIKRKNLFDLEMRDILLHHRELFCSYVPNNFHETNFHETS 1374
Query: 96 KQSSKRFNDS 67
+QS RF+DS
Sbjct: 1375 EQSFTRFHDS 1384
>ref|YP_007475694.1| RNA polymerase beta' subunit [Zingiber spectabile]
gi|449326174|gb|AGE92759.1| RNA polymerase beta' subunit
[Zingiber spectabile]
Length = 1380
Score = 67.4 bits (163), Expect = 2e-09
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVHHS +DKN + N E++++LLHHRE+FC ++PNNF++ +QS
Sbjct: 1316 VGTGFKKLVHHSSKDKNFYLEIKRKNLFDLEIKDLLLHHRELFCSYVPNNFHETLEQSFT 1375
Query: 81 RFNDS 67
RF+DS
Sbjct: 1376 RFHDS 1380
>gb|AEX94812.1| RNA polymerase beta' subunit (chloroplast) [Eucharis x grandiflora]
Length = 1343
Score = 67.4 bits (163), Expect = 2e-09
Identities = 35/65 (53%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC NNF+ P++S
Sbjct: 1279 VGTGFKKLVHRSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCAQNNFHDTPEKSFT 1338
Query: 81 RFNDS 67
RF++S
Sbjct: 1339 RFHNS 1343
>gb|AFM83283.1| RNA polymerase beta' subunit (chloroplast) [Kingia australis]
Length = 1385
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 3/64 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G F+ LVH SRQDKNI + N +MR+ILLHHRE+FC + NNF++ +QS
Sbjct: 1321 VGTGFQKLVHRSRQDKNIHLEIKRKNLFELQMRDILLHHRELFCSDVSNNFHETSEQSFT 1380
Query: 81 RFND 70
RFND
Sbjct: 1381 RFND 1384
>gb|AEZ49489.1| RNA polymerase beta'' subunit, partial [Neoastelia spectabilis]
Length = 1385
Score = 67.0 bits (162), Expect = 2e-09
Identities = 33/65 (50%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G F+ LVH SRQDKNI + N E+R+ILLHH E FC +PNNF++ P+QS
Sbjct: 1321 VGTGFQKLVHRSRQDKNIHLEIKRKNLFELEIRDILLHHIEFFCSCVPNNFHETPEQSFT 1380
Query: 81 RFNDS 67
RF++S
Sbjct: 1381 RFHNS 1385
>gb|AEX94843.1| RNA polymerase beta' subunit (chloroplast) [Xanthorrhoea preissii]
Length = 1368
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH S QDKNI K N EMR+ILLHH+E FC +PNNF+ P++S
Sbjct: 1304 VGTGFKKLVHRSGQDKNIHLEIKKKNLFELEMRDILLHHKEFFCSCVPNNFHDTPEKSFT 1363
Query: 81 RFNDS 67
RF +S
Sbjct: 1364 RFPNS 1368
>gb|AEX94825.1| RNA polymerase beta' subunit (chloroplast) [Oziroe biflora]
Length = 1386
Score = 67.0 bits (162), Expect = 2e-09
Identities = 34/65 (52%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EM++ILLHHRE FC P+NFY P++S
Sbjct: 1322 VGTGFKKLVHRSRQDKNIYLEIKKKNLFKLEMKDILLHHREFFCSCAPSNFYDTPEKSFT 1381
Query: 81 RFNDS 67
R ++S
Sbjct: 1382 RIHNS 1386
>gb|AEZ49469.1| RNA polymerase beta'' subunit [Albuca kirkii]
Length = 1386
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC P+NFY P++S
Sbjct: 1322 VGTGFKKLVHRSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCAPSNFYDTPEKSFT 1381
Query: 81 RFNDS 67
R +S
Sbjct: 1382 RILNS 1386
>gb|AEX94834.1| RNA polymerase beta' subunit (chloroplast) [Ruscus aculeatus]
Length = 1387
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQ KNI K N EMR+ILLHHRE FC P+NFY P++S K
Sbjct: 1323 VGTGFKKLVHRSRQGKNIHLEIKKKNLFELEMRDILLHHREFFCSCAPSNFYDTPEKSFK 1382
Query: 81 RFNDS 67
R +S
Sbjct: 1383 RIPNS 1387
>gb|AEX94823.1| RNA polymerase beta' subunit (chloroplast) [Drimia altissima]
Length = 1386
Score = 66.6 bits (161), Expect = 3e-09
Identities = 35/65 (53%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC P+NFY P++S
Sbjct: 1322 VGTGFKKLVHRSRQDKNIHLEIKKKNLFELEMRDILLHHREFFCSCAPSNFYDTPEKSFT 1381
Query: 81 RFNDS 67
R +S
Sbjct: 1382 RILNS 1386
>gb|AEX94831.1| RNA polymerase beta' subunit (chloroplast) [Eriospermum cervicorne]
Length = 1385
Score = 66.2 bits (160), Expect = 4e-09
Identities = 34/65 (52%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -3
Query: 252 IGARFKNLVHHSRQDKNIP*---KTNTILFEMRNILLHHREIFCFFIPNNFYKIPKQSSK 82
+G FK LVH SRQDKNI K N EMR+ILLHHRE FC P+NFY P++
Sbjct: 1321 VGTGFKKLVHRSRQDKNIHLEIKKKNLFKLEMRDILLHHREFFCSCAPSNFYDTPEKLFT 1380
Query: 81 RFNDS 67
R ++S
Sbjct: 1381 RIHNS 1385