BLASTX nr result

ID: Stemona21_contig00043568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00043568
         (313 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...    71   1e-10
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]    71   1e-10
ref|XP_006447073.1| hypothetical protein CICLE_v10018352mg [Citr...    67   2e-09
ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09
ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containi...    66   4e-09
ref|XP_002509520.1| pentatricopeptide repeat-containing protein,...    63   4e-08

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = -3

Query: 155 ADRCSSMRQLKQVHARMVVADRIGDNFAASRILSFAALHPRGDLTHALALF 3
           AD+C+SM QLKQ+HA+M+V+ RI DN+AASR+LSF AL   GDL++AL LF
Sbjct: 33  ADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLF 83


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 33/51 (64%), Positives = 43/51 (84%)
 Frame = -3

Query: 155 ADRCSSMRQLKQVHARMVVADRIGDNFAASRILSFAALHPRGDLTHALALF 3
           AD+C+SM QLKQ+HA+M+V+ RI DN+AASR+LSF AL   GDL++AL LF
Sbjct: 35  ADKCTSMHQLKQIHAQMIVSARIHDNYAASRLLSFCALSESGDLSYALRLF 85


>ref|XP_006447073.1| hypothetical protein CICLE_v10018352mg [Citrus clementina]
           gi|568831618|ref|XP_006470058.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g56310-like [Citrus sinensis]
           gi|557549684|gb|ESR60313.1| hypothetical protein
           CICLE_v10018352mg [Citrus clementina]
          Length = 463

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = -3

Query: 155 ADRCSSMRQLKQVHARMVVADRIGDNFAASRILSFAALHPRGDLTHALALF 3
           AD+C SM QLKQ+HA+M+++ RI D+FAASR+L+F AL   GDL++A  LF
Sbjct: 22  ADKCKSMHQLKQIHAQMIISSRIQDHFAASRLLAFCALSSSGDLSYATRLF 72


>ref|XP_004233586.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum lycopersicum]
          Length = 477

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/51 (60%), Positives = 42/51 (82%)
 Frame = -3

Query: 155 ADRCSSMRQLKQVHARMVVADRIGDNFAASRILSFAALHPRGDLTHALALF 3
           AD+C+S+ QLKQ+HA+M+V  RI DNFAASR+LSF+AL   G L++A+ LF
Sbjct: 36  ADQCTSLHQLKQIHAQMIVRARIHDNFAASRLLSFSALSQSGSLSYAVRLF 86


>ref|XP_006338806.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g56310-like [Solanum tuberosum]
          Length = 477

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/51 (56%), Positives = 43/51 (84%)
 Frame = -3

Query: 155 ADRCSSMRQLKQVHARMVVADRIGDNFAASRILSFAALHPRGDLTHALALF 3
           AD+C+S+ QLKQ+HA+M+++ RI DN+AASR+LSF+AL   G L++A+ LF
Sbjct: 36  ADQCTSLHQLKQIHAQMIISARIHDNYAASRLLSFSALSESGSLSYAVRLF 86


>ref|XP_002509520.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549419|gb|EEF50907.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 413

 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 28/50 (56%), Positives = 39/50 (78%)
 Frame = -3

Query: 152 DRCSSMRQLKQVHARMVVADRIGDNFAASRILSFAALHPRGDLTHALALF 3
           D+C+SM QLKQ+HA+M++  RI D+FAASR+LSF AL    D+ +A+ LF
Sbjct: 57  DKCTSMTQLKQIHAQMILTSRISDHFAASRLLSFCALSNSRDINYAIKLF 106


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