BLASTX nr result
ID: Stemona21_contig00043230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Stemona21_contig00043230
(288 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containi... 64 3e-12
ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containi... 64 4e-12
ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [A... 60 2e-11
ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [S... 55 2e-11
gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indi... 55 4e-11
gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japo... 55 4e-11
ref|XP_004973929.1| PREDICTED: pentatricopeptide repeat-containi... 53 8e-11
dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare] 53 8e-11
gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays] 52 1e-10
ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea ma... 52 1e-10
ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containi... 53 2e-10
gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlise... 58 2e-09
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera] 65 1e-08
ref|XP_002871814.1| pentatricopeptide repeat-containing protein ... 62 2e-08
ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar... 63 5e-08
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi... 59 5e-08
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi... 62 6e-08
ref|XP_006400384.1| hypothetical protein EUTSA_v10013477mg [Eutr... 62 1e-07
ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, part... 62 1e-07
gb|EOY10792.1| Pentatricopeptide repeat (PPR) superfamily protei... 60 4e-07
>ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X1 [Solanum tuberosum]
gi|565385886|ref|XP_006358788.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X2 [Solanum tuberosum]
gi|565385889|ref|XP_006358789.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like isoform X3 [Solanum tuberosum]
Length = 472
Score = 63.5 bits (153), Expect(2) = 3e-12
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FL+E SR+GF PPVRGRDLL+ GL+SAGYLES L
Sbjct: 248 EAQEFLEEMSRKGFNPPVRGRDLLIDGLLSAGYLESAKGL 287
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
+FNRL+ PQTT+V+ A+L L +NF
Sbjct: 182 LFNRLKNFDCPQTTEVYNAMLFALCEVKNF 211
>ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Solanum lycopersicum]
Length = 470
Score = 63.5 bits (153), Expect(2) = 4e-12
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FL+E SR+GF PPVRGRDLL+ GL+SAGYLES L
Sbjct: 246 EAQEFLEEMSRKGFNPPVRGRDLLIDGLLSAGYLESAKGL 285
Score = 33.1 bits (74), Expect(2) = 4e-12
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
+FNRL+ G QTT+V+ A+L L +NF
Sbjct: 180 LFNRLKNFGCSQTTEVYNAMLFALCEVKNF 209
>ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [Amborella trichopoda]
gi|548837251|gb|ERM98077.1| hypothetical protein
AMTR_s00210p00017530 [Amborella trichopoda]
Length = 459
Score = 59.7 bits (143), Expect(2) = 2e-11
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EA++FL+E S++GF PPVRGRDLL+ GL++AGYLES L
Sbjct: 235 EAREFLEEMSKKGFNPPVRGRDLLIDGLLNAGYLESAKEL 274
Score = 34.7 bits (78), Expect(2) = 2e-11
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
VFNR++ PQTT V+ +LLS L +NF
Sbjct: 169 VFNRMKHFDCPQTTGVYNSLLSALCMVKNF 198
>ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
gi|241942184|gb|EES15329.1| hypothetical protein
SORBIDRAFT_07g026590 [Sorghum bicolor]
Length = 426
Score = 54.7 bits (130), Expect(2) = 2e-11
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +1
Query: 145 HEAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
+EAQ FLD+ + RGF PPVRGRDLLV GL+ AG+LE
Sbjct: 233 NEAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGHLE 268
Score = 39.7 bits (91), Expect(2) = 2e-11
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
VFNRL R G PQTT+V+ ALL L A NF
Sbjct: 168 VFNRLPRFGCPQTTEVYNALLDALCANGNF 197
>gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
Length = 465
Score = 54.7 bits (130), Expect(2) = 4e-11
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RGF+PPVRGRDLLV GL+ AG LE
Sbjct: 241 EAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLE 275
Score = 38.5 bits (88), Expect(2) = 4e-11
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
VFNRL R G PQTT V+ ALL L A +FA
Sbjct: 175 VFNRLPRFGCPQTTQVYNALLDALCANGSFA 205
>gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
Length = 461
Score = 54.7 bits (130), Expect(2) = 4e-11
Identities = 25/35 (71%), Positives = 29/35 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RGF+PPVRGRDLLV GL+ AG LE
Sbjct: 237 EAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLE 271
Score = 38.5 bits (88), Expect(2) = 4e-11
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
VFNRL R G PQTT V+ ALL L A +FA
Sbjct: 171 VFNRLPRFGCPQTTQVYNALLDALCANGSFA 201
>ref|XP_004973929.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Setaria italica]
Length = 459
Score = 52.8 bits (125), Expect(2) = 8e-11
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RGF PPVRGRDLLV GL+ AG LE
Sbjct: 235 EAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLE 269
Score = 39.3 bits (90), Expect(2) = 8e-11
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
VFNRL R G PQT +V+ ALL L A NFA
Sbjct: 169 VFNRLPRFGCPQTAEVYNALLDALCANGNFA 199
>dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 459
Score = 52.8 bits (125), Expect(2) = 8e-11
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RGF PPVRGRDLLV GL+ AG LE
Sbjct: 235 EAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLE 269
Score = 39.3 bits (90), Expect(2) = 8e-11
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
VFNRL G PQTT+V+ ALL L A NFA
Sbjct: 169 VFNRLPHFGCPQTTEVYNALLDALCANGNFA 199
>gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
Length = 456
Score = 51.6 bits (122), Expect(2) = 1e-10
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RG PPVRGRDLLV GL+ AG+LE
Sbjct: 232 EAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLE 266
Score = 39.7 bits (91), Expect(2) = 1e-10
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
VFNRL R G PQTT+V+ ALL L A NF
Sbjct: 166 VFNRLPRFGCPQTTEVYNALLDALCANGNF 195
>ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
gi|223943533|gb|ACN25850.1| unknown [Zea mays]
Length = 322
Score = 51.6 bits (122), Expect(2) = 1e-10
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RG PPVRGRDLLV GL+ AG+LE
Sbjct: 98 EAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLE 132
Score = 39.7 bits (91), Expect(2) = 1e-10
Identities = 19/30 (63%), Positives = 21/30 (70%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
VFNRL R G PQTT+V+ ALL L A NF
Sbjct: 32 VFNRLPRFGCPQTTEVYNALLDALCANGNF 61
>ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Brachypodium distachyon]
Length = 464
Score = 52.8 bits (125), Expect(2) = 2e-10
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
EAQ FLD+ + RGF PPVRGRDLLV GL+ AG LE
Sbjct: 240 EAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLE 274
Score = 38.1 bits (87), Expect(2) = 2e-10
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
VFNRL G PQTT+V+ ALL L + NFA
Sbjct: 174 VFNRLPHFGCPQTTEVYNALLDALCSNGNFA 204
>gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlisea aurea]
Length = 419
Score = 58.2 bits (139), Expect(2) = 2e-09
Identities = 25/40 (62%), Positives = 33/40 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FL+E S++G+ PPVRGRDLL+ GL++AGYLE L
Sbjct: 193 EAQEFLEEMSKKGYNPPVRGRDLLIDGLLNAGYLECAKGL 232
Score = 28.9 bits (63), Expect(2) = 2e-09
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 3 VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
+FN L+ + PQT +V+ +LL L +NF
Sbjct: 127 LFNGLKNLDCPQTIEVYNSLLFALCEVKNF 156
>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
Length = 356
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSLDGRREE 285
EAQDFL+E SR+GF PPVRGRDLLV GL++AGYLE+ + +R E
Sbjct: 187 EAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMLAKRVE 232
>ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297317651|gb|EFH48073.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 459
Score = 61.6 bits (148), Expect(2) = 2e-08
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FLDE SR+GF PP RGRDLL+ GL++AGYLES +
Sbjct: 235 EAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEI 274
Score = 22.3 bits (46), Expect(2) = 2e-08
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +3
Query: 18 RRIGYPQTTDVHKALLSVLVATRNF 92
+ +G QT DV+ ALL L + F
Sbjct: 174 KTLGCQQTVDVYNALLHALCDVKMF 198
>ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g18390, mitochondrial; Flags: Precursor
gi|332005166|gb|AED92549.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/40 (70%), Positives = 33/40 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FLDE SRRGF PP RGRDLL+ GL++AGYLES +
Sbjct: 235 EAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 274
>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
gi|449518358|ref|XP_004166209.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g18390,
mitochondrial-like [Cucumis sativus]
Length = 455
Score = 59.3 bits (142), Expect(2) = 5e-08
Identities = 26/40 (65%), Positives = 34/40 (85%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FL+E S++GF PP+RGRDLLV GL++AGYLES +
Sbjct: 231 EAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDM 270
Score = 23.1 bits (48), Expect(2) = 5e-08
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 VFNRLRR-IGYPQTTDVHKALLSVLVATRNF 92
+FN+ + I PQT +V+ ALL L + F
Sbjct: 164 IFNQCSKSIDCPQTVEVYNALLFALCEVKMF 194
>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product
[Vitis vinifera]
Length = 454
Score = 62.4 bits (150), Expect = 6e-08
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQDFL+E SR+GF PPVRGRDLLV GL++AGYLE+ +
Sbjct: 230 EAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEM 269
>ref|XP_006400384.1| hypothetical protein EUTSA_v10013477mg [Eutrema salsugineum]
gi|557101474|gb|ESQ41837.1| hypothetical protein
EUTSA_v10013477mg [Eutrema salsugineum]
Length = 461
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FLDE SR+GF PP RGRDLL+ GL++AGYLES +
Sbjct: 237 EAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEM 276
>ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, partial [Capsella rubella]
gi|482556356|gb|EOA20548.1| hypothetical protein
CARUB_v10000860mg, partial [Capsella rubella]
Length = 477
Score = 61.6 bits (148), Expect = 1e-07
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FLDE SR+GF PP RGRDLL+ GL++AGYLES +
Sbjct: 253 EAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEM 292
>gb|EOY10792.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 455
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/40 (67%), Positives = 33/40 (82%)
Frame = +1
Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
EAQ+FL+E S+ GF PPVRGRDLLV GL++AGYLES +
Sbjct: 231 EAQEFLEEMSKMGFNPPVRGRDLLVEGLLNAGYLESAKEM 270