BLASTX nr result

ID: Stemona21_contig00043230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Stemona21_contig00043230
         (288 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-12
ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-12
ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [A...    60   2e-11
ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [S...    55   2e-11
gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indi...    55   4e-11
gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japo...    55   4e-11
ref|XP_004973929.1| PREDICTED: pentatricopeptide repeat-containi...    53   8e-11
dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]     53   8e-11
gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]         52   1e-10
ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea ma...    52   1e-10
ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containi...    53   2e-10
gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlise...    58   2e-09
emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]    65   1e-08
ref|XP_002871814.1| pentatricopeptide repeat-containing protein ...    62   2e-08
ref|NP_197340.1| pentatricopeptide repeat-containing protein [Ar...    63   5e-08
ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-08
ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containi...    62   6e-08
ref|XP_006400384.1| hypothetical protein EUTSA_v10013477mg [Eutr...    62   1e-07
ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, part...    62   1e-07
gb|EOY10792.1| Pentatricopeptide repeat (PPR) superfamily protei...    60   4e-07

>ref|XP_006358787.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like isoform X1 [Solanum tuberosum]
           gi|565385886|ref|XP_006358788.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like isoform X2 [Solanum tuberosum]
           gi|565385889|ref|XP_006358789.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like isoform X3 [Solanum tuberosum]
          Length = 472

 Score = 63.5 bits (153), Expect(2) = 3e-12
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FL+E SR+GF PPVRGRDLL+ GL+SAGYLES   L
Sbjct: 248 EAQEFLEEMSRKGFNPPVRGRDLLIDGLLSAGYLESAKGL 287



 Score = 33.5 bits (75), Expect(2) = 3e-12
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           +FNRL+    PQTT+V+ A+L  L   +NF
Sbjct: 182 LFNRLKNFDCPQTTEVYNAMLFALCEVKNF 211


>ref|XP_004248026.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Solanum lycopersicum]
          Length = 470

 Score = 63.5 bits (153), Expect(2) = 4e-12
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FL+E SR+GF PPVRGRDLL+ GL+SAGYLES   L
Sbjct: 246 EAQEFLEEMSRKGFNPPVRGRDLLIDGLLSAGYLESAKGL 285



 Score = 33.1 bits (74), Expect(2) = 4e-12
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           +FNRL+  G  QTT+V+ A+L  L   +NF
Sbjct: 180 LFNRLKNFGCSQTTEVYNAMLFALCEVKNF 209


>ref|XP_006830661.1| hypothetical protein AMTR_s00210p00017530 [Amborella trichopoda]
           gi|548837251|gb|ERM98077.1| hypothetical protein
           AMTR_s00210p00017530 [Amborella trichopoda]
          Length = 459

 Score = 59.7 bits (143), Expect(2) = 2e-11
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EA++FL+E S++GF PPVRGRDLL+ GL++AGYLES   L
Sbjct: 235 EAREFLEEMSKKGFNPPVRGRDLLIDGLLNAGYLESAKEL 274



 Score = 34.7 bits (78), Expect(2) = 2e-11
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           VFNR++    PQTT V+ +LLS L   +NF
Sbjct: 169 VFNRMKHFDCPQTTGVYNSLLSALCMVKNF 198


>ref|XP_002445834.1| hypothetical protein SORBIDRAFT_07g026590 [Sorghum bicolor]
           gi|241942184|gb|EES15329.1| hypothetical protein
           SORBIDRAFT_07g026590 [Sorghum bicolor]
          Length = 426

 Score = 54.7 bits (130), Expect(2) = 2e-11
 Identities = 25/36 (69%), Positives = 30/36 (83%)
 Frame = +1

Query: 145 HEAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           +EAQ FLD+ + RGF PPVRGRDLLV GL+ AG+LE
Sbjct: 233 NEAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGHLE 268



 Score = 39.7 bits (91), Expect(2) = 2e-11
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           VFNRL R G PQTT+V+ ALL  L A  NF
Sbjct: 168 VFNRLPRFGCPQTTEVYNALLDALCANGNF 197


>gb|EAZ07706.1| hypothetical protein OsI_29963 [Oryza sativa Indica Group]
          Length = 465

 Score = 54.7 bits (130), Expect(2) = 4e-11
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RGF+PPVRGRDLLV GL+ AG LE
Sbjct: 241 EAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLE 275



 Score = 38.5 bits (88), Expect(2) = 4e-11
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
           VFNRL R G PQTT V+ ALL  L A  +FA
Sbjct: 175 VFNRLPRFGCPQTTQVYNALLDALCANGSFA 205


>gb|EAZ43400.1| hypothetical protein OsJ_28005 [Oryza sativa Japonica Group]
          Length = 461

 Score = 54.7 bits (130), Expect(2) = 4e-11
 Identities = 25/35 (71%), Positives = 29/35 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RGF+PPVRGRDLLV GL+ AG LE
Sbjct: 237 EAQAFLDDMAERGFHPPVRGRDLLVDGLVRAGRLE 271



 Score = 38.5 bits (88), Expect(2) = 4e-11
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
           VFNRL R G PQTT V+ ALL  L A  +FA
Sbjct: 171 VFNRLPRFGCPQTTQVYNALLDALCANGSFA 201


>ref|XP_004973929.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Setaria italica]
          Length = 459

 Score = 52.8 bits (125), Expect(2) = 8e-11
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RGF PPVRGRDLLV GL+ AG LE
Sbjct: 235 EAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLE 269



 Score = 39.3 bits (90), Expect(2) = 8e-11
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
           VFNRL R G PQT +V+ ALL  L A  NFA
Sbjct: 169 VFNRLPRFGCPQTAEVYNALLDALCANGNFA 199


>dbj|BAJ92109.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 459

 Score = 52.8 bits (125), Expect(2) = 8e-11
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RGF PPVRGRDLLV GL+ AG LE
Sbjct: 235 EAQAFLDDMATRGFRPPVRGRDLLVDGLVRAGRLE 269



 Score = 39.3 bits (90), Expect(2) = 8e-11
 Identities = 19/31 (61%), Positives = 21/31 (67%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
           VFNRL   G PQTT+V+ ALL  L A  NFA
Sbjct: 169 VFNRLPHFGCPQTTEVYNALLDALCANGNFA 199


>gb|AFW61544.1| hypothetical protein ZEAMMB73_526638 [Zea mays]
          Length = 456

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RG  PPVRGRDLLV GL+ AG+LE
Sbjct: 232 EAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLE 266



 Score = 39.7 bits (91), Expect(2) = 1e-10
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           VFNRL R G PQTT+V+ ALL  L A  NF
Sbjct: 166 VFNRLPRFGCPQTTEVYNALLDALCANGNF 195


>ref|NP_001159344.1| uncharacterized protein LOC100304439 [Zea mays]
           gi|223943533|gb|ACN25850.1| unknown [Zea mays]
          Length = 322

 Score = 51.6 bits (122), Expect(2) = 1e-10
 Identities = 24/35 (68%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RG  PPVRGRDLLV GL+ AG+LE
Sbjct: 98  EAQAFLDDMAGRGLRPPVRGRDLLVDGLVRAGHLE 132



 Score = 39.7 bits (91), Expect(2) = 1e-10
 Identities = 19/30 (63%), Positives = 21/30 (70%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           VFNRL R G PQTT+V+ ALL  L A  NF
Sbjct: 32  VFNRLPRFGCPQTTEVYNALLDALCANGNF 61


>ref|XP_003574800.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Brachypodium distachyon]
          Length = 464

 Score = 52.8 bits (125), Expect(2) = 2e-10
 Identities = 25/35 (71%), Positives = 28/35 (80%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLE 252
           EAQ FLD+ + RGF PPVRGRDLLV GL+ AG LE
Sbjct: 240 EAQAFLDDMASRGFRPPVRGRDLLVDGLVRAGRLE 274



 Score = 38.1 bits (87), Expect(2) = 2e-10
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNFA 95
           VFNRL   G PQTT+V+ ALL  L +  NFA
Sbjct: 174 VFNRLPHFGCPQTTEVYNALLDALCSNGNFA 204


>gb|EPS58676.1| hypothetical protein M569_16136, partial [Genlisea aurea]
          Length = 419

 Score = 58.2 bits (139), Expect(2) = 2e-09
 Identities = 25/40 (62%), Positives = 33/40 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FL+E S++G+ PPVRGRDLL+ GL++AGYLE    L
Sbjct: 193 EAQEFLEEMSKKGYNPPVRGRDLLIDGLLNAGYLECAKGL 232



 Score = 28.9 bits (63), Expect(2) = 2e-09
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +3

Query: 3   VFNRLRRIGYPQTTDVHKALLSVLVATRNF 92
           +FN L+ +  PQT +V+ +LL  L   +NF
Sbjct: 127 LFNGLKNLDCPQTIEVYNSLLFALCEVKNF 156


>emb|CAN80394.1| hypothetical protein VITISV_001596 [Vitis vinifera]
          Length = 356

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/46 (65%), Positives = 37/46 (80%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSLDGRREE 285
           EAQDFL+E SR+GF PPVRGRDLLV GL++AGYLE+   +  +R E
Sbjct: 187 EAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEMLAKRVE 232


>ref|XP_002871814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317651|gb|EFH48073.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 459

 Score = 61.6 bits (148), Expect(2) = 2e-08
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FLDE SR+GF PP RGRDLL+ GL++AGYLES   +
Sbjct: 235 EAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEI 274



 Score = 22.3 bits (46), Expect(2) = 2e-08
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 18  RRIGYPQTTDVHKALLSVLVATRNF 92
           + +G  QT DV+ ALL  L   + F
Sbjct: 174 KTLGCQQTVDVYNALLHALCDVKMF 198


>ref|NP_197340.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635760|sp|Q94JX6.2|PP391_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g18390, mitochondrial; Flags: Precursor
           gi|332005166|gb|AED92549.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 459

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FLDE SRRGF PP RGRDLL+ GL++AGYLES   +
Sbjct: 235 EAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEM 274


>ref|XP_004142520.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
           gi|449518358|ref|XP_004166209.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial-like [Cucumis sativus]
          Length = 455

 Score = 59.3 bits (142), Expect(2) = 5e-08
 Identities = 26/40 (65%), Positives = 34/40 (85%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FL+E S++GF PP+RGRDLLV GL++AGYLES   +
Sbjct: 231 EAQEFLEEMSQKGFNPPLRGRDLLVEGLLNAGYLESAKDM 270



 Score = 23.1 bits (48), Expect(2) = 5e-08
 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +3

Query: 3   VFNRLRR-IGYPQTTDVHKALLSVLVATRNF 92
           +FN+  + I  PQT +V+ ALL  L   + F
Sbjct: 164 IFNQCSKSIDCPQTVEVYNALLFALCEVKMF 194


>ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
           mitochondrial [Vitis vinifera]
           gi|296085168|emb|CBI28663.3| unnamed protein product
           [Vitis vinifera]
          Length = 454

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQDFL+E SR+GF PPVRGRDLLV GL++AGYLE+   +
Sbjct: 230 EAQDFLEEMSRKGFNPPVRGRDLLVDGLLNAGYLEAAKEM 269


>ref|XP_006400384.1| hypothetical protein EUTSA_v10013477mg [Eutrema salsugineum]
           gi|557101474|gb|ESQ41837.1| hypothetical protein
           EUTSA_v10013477mg [Eutrema salsugineum]
          Length = 461

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FLDE SR+GF PP RGRDLL+ GL++AGYLES   +
Sbjct: 237 EAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEM 276


>ref|XP_006287650.1| hypothetical protein CARUB_v10000860mg, partial [Capsella rubella]
           gi|482556356|gb|EOA20548.1| hypothetical protein
           CARUB_v10000860mg, partial [Capsella rubella]
          Length = 477

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FLDE SR+GF PP RGRDLL+ GL++AGYLES   +
Sbjct: 253 EAQEFLDEMSRKGFNPPARGRDLLIEGLLNAGYLESAKEM 292


>gb|EOY10792.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 455

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 27/40 (67%), Positives = 33/40 (82%)
 Frame = +1

Query: 148 EAQDFLDEKSRRGFYPPVRGRDLLVSGLISAGYLESGTSL 267
           EAQ+FL+E S+ GF PPVRGRDLLV GL++AGYLES   +
Sbjct: 231 EAQEFLEEMSKMGFNPPVRGRDLLVEGLLNAGYLESAKEM 270


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