BLASTX nr result
ID: Stemona21_contig00043118
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Stemona21_contig00043118 (403 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAM01098.1|AC098682_2 Putative retroelement [Oryza sativa Jap... 59 9e-07 gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Ja... 59 9e-07 >gb|AAM01098.1|AC098682_2 Putative retroelement [Oryza sativa Japonica Group] gi|31431128|gb|AAP52950.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1367 Score = 58.5 bits (140), Expect = 9e-07 Identities = 29/73 (39%), Positives = 48/73 (65%) Frame = +2 Query: 161 DEPLMFT*GDAHDLLQPHDDPLVISAYLGQFDDQILLGQMLVDNESSTNIIFAESFDRMG 340 ++ + F GDA ++ PH DPLVISA + F+ + ++LVD ESS ++IFAE++ +MG Sbjct: 495 NQQISFGLGDAEGVMFPHQDPLVISAEIAGFE----VRRILVDGESSADVIFAEAYAKMG 550 Query: 341 IDRKSLVPTRTLL 379 + +++ P LL Sbjct: 551 LTTQAITPAPALL 563 >gb|AAK92584.1|AC074354_18 Putative retroelement [Oryza sativa Japonica Group] Length = 1705 Score = 58.5 bits (140), Expect = 9e-07 Identities = 29/73 (39%), Positives = 48/73 (65%) Frame = +2 Query: 161 DEPLMFT*GDAHDLLQPHDDPLVISAYLGQFDDQILLGQMLVDNESSTNIIFAESFDRMG 340 ++ + F GDA ++ PH DPLVISA + F+ + ++LVD ESS ++IFAE++ +MG Sbjct: 637 NQQISFGLGDAEGVMFPHQDPLVISAEIAGFE----VRRILVDGESSADVIFAEAYAKMG 692 Query: 341 IDRKSLVPTRTLL 379 + +++ P LL Sbjct: 693 LTTQAITPAPALL 705